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At least 577 records · Page 32

SU-F-R-06: Traumatic Brachial Plexus Injury Imaging, Developing a Coherent Clinical Protocol From Literature Review Through Practice

Purpose: Medical Physics teams can now play a critical role to help plan and provide studied approaches for traumatic brachial plexus MR imaging (tbpMRI). This is especially important for coordination with uncommon applications, since it is challenging to select the right modality, parameters, and train technologists on the essential components. For this work, we started with a review of the medical literature, performed crossover/volunteer studies to bring tbpMRI to practice with greater image QC and protocol management. Methods: To the best of our knowledge, we reviewed the known searchable domain for tbpMRI. We found 69 total articles since 2000. Articles were evaluated with our published protocol for literature management (LIMES3). Two physicists and two radiologists condensed the information from all articles into a knowledgebase. Results: The initial literature demonstrated great heterogeneity, which was a sign that this area needed greater consistency. Despite inconsistency and imprecision, we extracted the most relevant targets using our long-term experience with protocol development in MSK. We ran volunteers on six different magnets of various field strengths with multiple receiver coils, and rebuilt a coherent protocol for tbpMRI. Our radiologists rated LIMES3 work as superior. We have received referrals from the ER and have conducted four patient evaluations. Conclusion: Traumatic brachial plexus MRI has great possible benefits for patients. This work supports the complexity of tbpMRI scanning. As this is rarely performed, it requires a more diligent protocol workflow, coordination of caregivers, and education within multiple clinical departments. Choosing the correct imaging exam can be critical, as patients can have significant neuropathy and/or paralysis. The LIMES3 protocol is well liked at our institution, and forms the cornerstone of understanding for our work. Our literature management led to a better clinical protocol creation despite the diffuse and inconclusive information presented in the existing medical literature.

60 APPLIED LIFE SCIENCES↗

msdlive-cli-distro

MSD-LIVE, the MultiSector Dynamics – Living, Intuitive, Value-adding, Environment, is a flexible and scalable data and code management system combined with a distributed computational platform that will enable MSD researchers to document and archive their data, run their models and analysis tools, and share their data, software, and multi-model workflows within a robust Community of Practice. MSD-LIVE will facilitate a new open, collaborative, resource-rich, technology-facilitated, community-driven way of doing MSD research.

Lansing, Carina↗

Department of Energy's Biological and Environmental Research Strategic Data Roadmap for Earth System Science

Rapid advances in experimental, sensor, and computational technologies and techniques are driving exponential growth in the volume, acquisition rate, variety, and complexity of scientific data. This wealth of scientifically meaningful data has tremendous potential to lead to scientific discovery. However, to achieve scientific breakthroughs, these data must be exploitable—they must be analyzed effectively and efficiently and the results shared and communicated easily within the wider Department of Energy’s (DOE’s) Biological and Environmental Research (BER) Climate and Environmental Sciences Division (CESD) community. The explosion in data complexity and scale makes these tasks exceedingly difficult to achieve, particularly given that an increasing number of disciplines are working across techniques, integrating simulation and experimental or observational results (see Table 5 in Appendix 2). Consequently, we need new approaches to data management, analysis, and visualization that provide research teams with easy-to-use and scalable end-to-end solutions. These solutions must facilitate (and where feasible, automate and capture) every stage in the data lifecycle (shown in Figure 1), from collection to management, annotation, sharing, discovery, analysis, and visualization. In addition, the core functionalities are the same across climate science communities, but they require customization to adapt to specific needs and fit into research and analysis workflows. To this end, the mission of CESD’s Data and Informatics Program is to integrate all existing and future distributed CESD data holdings into a seamless and unified environment for the acceleration of Earth system science.

54 ENVIRONMENTAL SCIENCES↗

Extending the Publish/Subscribe Abstraction for High-Performance I/O and Data Management at Extreme Scale

The Adaptable I/O System (ADIOS) represents the culmination of substantial investment in Scientific Data Management, and it has demonstrated success for several important extreme-scale science cases. However, looking towards the exascale and beyond, we see the development of yet more stringent data management requirements that require new abstractions. Therefore, there is an opportunity to attempt to connect the traditional realms of HPC I/O optimization with the Database / Data Management community. As such, in this paper we offer some specific examples from our ongoing work in managing data structures, services, and performance at the extreme scale for scientific computing. Using the publish/subscribe model afforded by ADIOS, we demonstrate a set of services that connect data format, metadata, queries, data reduction, and high-performance delivery. The resulting publish/subscribe framework facilitates connection to on-line workflow systems to enable the dynamic capabilities that will be required for exascale science.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Future Intensity‐Duration‐Frequency Curves of Extreme Precipitation in the Midwest United States From Convection‐Permitting Modeling

Abstract During the last four decades, global warming has statistically significant intensified extreme precipitation events in the Midwestern United States (defined here as the region covering Illinois, Indiana, Ohio, and Kentucky), leading to increased risks to human life, property, and infrastructure. To enable climate change adaptation and resilience across various economic and social sectors in this region, updated information about future climate changes, specifically at finer spatial scales, is essential. Leveraging a new 150‐year dynamical downscaling data set at convection‐permitting resolution, this study introduces a framework to construct the projected future intensity‐duration‐frequency (IDF) curves of heavy precipitation, which are prominent tools for infrastructure design and water resources management. This framework generates IDF curves at both sub‐daily and multi‐day duration utilizing hourly in situ observations as well as quantile‐based statistical techniques in bias‐correction and return levels selection. The assumption of non‐stationarity in the distribution parameter fitting process is also implemented in this workflow. Compared to historical IDF curves for 1980–2022, future projected IDF curves for 2058–2100 under Representative Concentration Pathway (RCP) 4.5 and RCP 8.5 scenarios indicate an average intensity increase of approximately 15% and 25%, respectively, across 74 stations, considering both annual and seasonal timescales. Future projections suggest that extreme precipitation events may become more severe across six investigated return periods, with longer return periods showing a greater increase. The frequency of future extreme precipitation events in the Midwest region is also projected to double. Furthermore, current results reveal spatial heterogeneity of future trends across stations owing to the high‐resolution input data set. Plain Language Summary This study investigates the evolving nature of extreme precipitation events in the Midwestern United States under a changing climate. By leveraging a high‐resolution dynamical downscaling data set, we construct projected intensity‐duration‐frequency (IDF) curves for future extreme rainfall events. These curves serve as vital tools for infrastructure planning and water resource management. Our analysis reveals a significant increase in both the intensity and frequency of extreme precipitation events in the region. Future projected IDF curves for the late century indicate an average intensity increase of approximately 15%–25% compared to historical values. Moreover, the frequency of such events is expected to double. Spatial heterogeneity in future trends is observed across different stations within the Midwest, highlighting the importance of high‐resolution modeling in capturing localized climate variability. These findings underscore the urgent need for climate adaptation strategies to mitigate the increasing risks associated with extreme precipitation events in the region. Key Points This study introduces a workflow to construct future intensity‐duration‐frequency (IDF) curves over the Midwest United States using a new convection‐permitting modeling data set The current IDF construction workflow reproduces well the historical observed IDF 30 curves in summer months with median relative errors of 2.4% among 74 stations and 6 investigated durations The projected IDF curves show diverse future trends of extreme precipitation across stations, with intensity increases of approximately 15% and 25% under RCP4.5 and RCP8.5 climate scenarios, respectively, and a doubling of frequency on average

Nguyen, Trung↗

An Analysis Workflow-Aware Storage System for Multi-Core Active Flash Arrays

Here, the need for novel data analysis is urgent in the face of a data deluge from modern applications. Traditional approaches to data analysis incur significant data movement costs, moving data back and forth between the storage system and the processor. Emerging Active Flash devices enable processing on the flash, where the data already resides. An array of such Active Flash devices allows us to revisit how analysis workflows interact with storage systems. By seamlessly blending together the flash storage and data analysis, we create an analysis workflow-aware storage system, AnalyzeThis. Our guiding principle is that analysis-awareness be deeply ingrained in each and every layer of the storage, elevating data analyses as first-class citizens, and transforming AnalyzeThis into a potent analytics-aware appliance. To evaluate the AnalyzeThis system, we have adopted both emulation and simulation approaches. In particular, we have evaluated AnalyzeThis by implementing the AnalyzeThis storage system on top of the Active Flash Array's emulation platform. We have also implemented an event-driven AnalyzeThis simulator, called AnalyzeThisSim, which allows us to address the limitations of the emulation platform, e.g., performance impact of using multi-core SSDs. The results from our emulation and simulation platforms indicate that AnalyzeThis is a viable approach for expediting workflow execution and minimizing data movement.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Science Capsule - Capturing the Data Life Cycle

The data generated from scientific workflows often become unusable due to the lack or incompleteness of information required for processing and analyzing the data. Reproducibility of scientific data and workflows facilitates efficient processing and analyses. A key to enabling reproducibility is to capture the end-to-end workflow life cycle, and any contextual metadata and provenance.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Development of Transient Coupled Chemical-Thermal-Fluids Simulation for Unsealed Aluminum-Clad Spent Nuclear Fuel Storage Canister

This study examines a preliminary three-dimensional (3D) multi-physics computational fluid dynamics (CFD) model of the unsealed canisters containing aluminum-clad spent nuclear fuel from INL’s ATR in the irradiated fuel storage facility. This 3D CFD model considers fully resolved fuel plates in an unsealed canister with small mass exchange with surrounding air as time evolves in the simulation and contains a network of chemical reactions to consider due to several of the side reactions occurring in the presence of water vapor, nitrogen, oxygen and carbon dioxide rather than in helium backfilled DOE standard canisters. Prior to the CFD modeling, the full set of chemical reactions under these conditions was analyzed, reduced, and refit to a more manageable number of equations for the computational efficiency of the 3D CFD simulation. To deal with the long time-scale of interest for tracking the possible buildup of trace species such as nitric acid, NOx, and hydrogen, a segregated time stepping algorithm is used, wherein the velocity field is only updated periodically, and assume to be in a pseudo steady state. This study first examines the theory of the model, workflow to establish radiolysis reaction network, and initial simulations of the evolutions of thermal fields, hydrogen gas and nitric acid concentrations within unsealed canisters in conditions relevant to the INL INTEC CPP-603 facility over a long period of time.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Development of Transient Coupled Chemical-Thermal-Fluids Simulation for Unsealed Aluminum-Clad Spent Nuclear Fuel Storage Canister

This study examines a preliminary three-dimensional (3D) multi-physics computational fluid dynamics (CFD) model of the unsealed canisters containing aluminum-clad spent nuclear fuel from INL’s ATR in the irradiated fuel storage facility. This 3D CFD model considers fully resolved fuel plates in an unsealed canister with small mass exchange with surrounding air as time evolves in the simulation and contains a network of chemical reactions to consider due to several of the side reactions occurring in the presence of water vapor, nitrogen, oxygen and carbon dioxide rather than in helium backfilled DOE standard canisters. Prior to the CFD modeling, the full set of chemical reactions under these conditions was analyzed, reduced, and refit to a more manageable number of equations for the computational efficiency of the 3D CFD simulation. To deal with the long time-scale of interest for tracking the possible buildup of trace species such as nitric acid, NOx, and hydrogen, a segregated time stepping algorithm is used, wherein the velocity field is only updated periodically, and assume to be in a pseudo steady state. This study first examines the theory of the model, workflow to establish radiolysis reaction network, and initial simulations of the evolutions of thermal fields, hydrogen gas and nitric acid concentrations within unsealed canisters in conditions relevant to the INL INTEC CPP-603 facility over a long period of time.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

TU-A-201-00: Image Guidance Technologies and Management Strategies

Recent years have seen a widespread proliferation of available in-room image guidance systems for radiation therapy target localization with many centers having multiple in-room options. In this session, available imaging systems for in-room IGRT will be reviewed highlighting the main differences in workflow efficiency, targeting accuracy and image quality as it relates to target visualization. Decision-making strategies for integrating these tools into clinical image guidance protocols that are tailored to specific disease sites like H&N, lung, pelvis, and spine SBRT will be discussed. Learning Objectives: Major system characteristics of a wide range of available in-room imaging systems for IGRT. Advantages / disadvantages of different systems for site-specific IGRT considerations. Concepts of targeting accuracy and time efficiency in designing clinical imaging protocols.

60 APPLIED LIFE SCIENCES↗

ASCEM Data Brower (ASCEMDB) v0.8

Data management tool designed for the Advanced Simulation Capability for Environmental Management (ASCEM) framework. Distinguishing features of this gateway include: (1) handling of complex geometry data, (2) advance selection mechanism, (3) state of art rendering of spatiotemporal data records, and (4) seamless integration with a distributed workflow engine.

Romosan, Alexandru↗

Integration of seismic-pressure-petrophysics inversion of continuous active-seismic monitoring data for monitoring and quantifying CO 2 plume (Final Report)

The overall objective of this project is to develop and validate an integrated package of joint seismic-pressure-petrophysics inversion (jSPPI) of continuous active-source seismic monitoring dataset capable of providing real-time monitoring of CO 2 plume during geologic carbon sequestration (GCS). The three specific developments include: (a) the methodologies for fast seismic full waveform inversion of continuous active source seismic monitoring, (CASSM) datasets for simultaneously estimating velocity and attenuation, and with data assimilation; (b) joint Bayesian petrophysical inversion of seismic models and pressure data for providing and updating CO 2 saturation models; (c) the methods using multiple datasets including (Crainfield and Frio-II borehole) synthetic, laboratory, and field CASSM datasets. The outcomes of jSPPI include (a) a workflow for processing CASSM data, (b) Bayesian inversion algorithms using CASSM data and pressure response data, and (c) integration with data assimilation algorithms for continuously updating site-specific models used for prediction and reservoir management. The validation of joint FWI will be conducted using synthetic models based on the Cranfield and Frio experiments as well as field CASSM datasets collected as part of the Frio-II pilot injection. To quantify and map the mass and distribution of CO 2 (saturation), we will jointly invert velocity and attenuation measurements from the FWI with a Bayesian approach using a rock physics model for attenuation (e.g., White’s attenuation model with two selected patch sizes (White, 1976; Dutta and Seriff, 1979)). The Bayesian inversion will be applied to each time step in the CASSM survey in an updating scheme, which integrates with an ensemble of reservoir simulations at each step. A more complete experimental validation dataset will be collected as part of a mesoscale (2-3 m) gas-CO 2 injection experiment utilizing a higher frequency version of the CASSM system developed for laboratory studies; the integrated inversion will be demonstrated using this dataset which will provide both a dense geometry as well as more precise secondary confirmation measurements (e.g. saturation) typically not available in the field. The resulting real-time map of CO 2 saturation is able to provide a deeper scientific understanding of the complex, time-varying dynamics of subsurface fluid flow migration path as well as the rapid detection of CO 2 leakage hazards.

25 ENERGY STORAGE↗

Improved Fuel Cycle Capability of Griffin for Fast Reactor Applications

Griffin is a MOOSE based reactor multiphysics analysis application jointly developed by Idaho National Laboratory and Argonne National Laboratory under the Department of Energy Office of Nuclear Energy Nuclear Energy Advanced Modeling and Simulation Program. This fiscal year, the fuel cycle capability has been significantly extended by improving the assembly shuffling option to allow flexible fuel reloading in the multi-cycle depletion calculation and incorporating decay between cycles. An equilibrium core calculation capability was also implemented to find an equilibrium core. Additionally, an enrichment search capability was added to determine the enrichment condition that allows a core to reach an equilibrium cycle with the end-of-cycle k-effective meeting a user-specified target value. The updated fuel management capability has been extensively tested using the three-dimensional ABTR problem with different batch schemes, exhibiting reasonable solutions in terms of manual shuffling, equilibrium cycle, and enrichment search calculations. The cross section generation workflow capability for fast reactors was further verified to produce microscopic cross sections as well as Griffin core inputs for an ring-heterogeneous configuration. Rigorous verification tests using the ABTR problem demonstrated that the RH core calculations, with cross sections and Griffin inputs generated from the cross section workflow of Griffin, produced accurate solution for fast reactor problems. In addition, an option to convert delay neutron parameter data generated from MC 2 -3 in the DLAYXS format into XML format was added to support transient calculations using MC 2 -3-generated data.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Using Selection Pressure as an Asset to Develop Reusable, Adaptable Software Systems

The Goddard Earth Sciences Data and Information Services Center (GES DISC) at NASA has over the years developed and honed several reusable architectural components for supporting large-scale data centers with a large customer base. These include a processing system (S4PM) and an archive system (S4PA) based upon a workflow engine called the Simple Scalable Script based Science Processor (S4P) and an online data visualization and analysis system (Giovanni). These subsystems are currently reused internally in a variety of combinations to implement customized data management on behalf of instrument science teams and other science investigators. Some of these subsystems (S4P and S4PM) have also been reused by other data centers for operational science processing. Our experience has been that development and utilization of robust interoperable and reusable software systems can actually flourish in environments defined by heterogeneous commodity hardware systems the emphasis on value-added customer service and the continual goal for achieving higher cost efficiencies. The repeated internal reuse that is fostered by such an environment encourages and even forces changes to the software that make it more reusable and adaptable. Allowing and even encouraging such selective pressures to software development has been a key factor In the success of S4P and S4PM which are now available to the open source community under the NASA Open source Agreement

Berrick, Stephen↗

Modeling NASA’s Procedural Requirement Processes - Implications for Digital Future

The National Aeronautics and Space Administration (NASA) has an ongoing Digital Transformation effort and to leverage and showcase the power of Digital Transformation, an effort is underway to develop an integrated, datacentric, model representing NASA’s key process requirements. The task was divided into three phases: As Is modeling, Analysis, and To Be Planning. As part of this effort, a team has completed the first Phase I of the modeling task and is nearing completion of the second phase. This effort will capture the key elements as requirements, responsibilities, allocations, roles, products, and associated lifecycle elements. The scope of modeling included NASA’s NPR 7120.5 (Project and Program Management), NPR 7123.1 (Systems Engineering) and NPRs 8705.2 (Risk classification for Robotic Missions) and 8705.4 (Human-Rating Requirements for Space Missions). This paper will summarize the approach, scope, parsing patterns applied, metamodel, and associated workflows for the As-Is modeling. It will also summarize the results and insights gleaned during that phase, including the review process. These insights have informed the analysis and will be discussed. The analysis modeling phase will also be summarized including how the stakeholders were engaged, how the common elements were handled and dispositioned, and will also describe some of the plans for the future of NASA NPDs and NPRs.

Systems Engineering↗

Development of Transient Coupled Chemical-Thermal-Fluids Simulation for Unsealed Aluminum-Clad Spent Nuclear Fuel Storage Canister - 19273

This study examines a preliminary three-dimensional (3D) multi-physics computational fluid dynamics (CFD) model of the unsealed canisters containing aluminum-clad spent nuclear fuel from INL's ATR in the irradiated fuel storage facility. This 3D CFD model considers fully resolved fuel plates in an unsealed canister with small mass exchange with surrounding air as time evolves in the simulation and contains a network of chemical reactions to consider due to several of the side reactions occurring in the presence of water vapor, nitrogen, oxygen and carbon dioxide rather than in helium backfilled DOE standard canisters. Prior to the CFD modeling, the full set of chemical reactions under these conditions was analyzed, reduced, and refit to a more manageable number of equations for the computational efficiency of the 3D CFD simulation. To deal with the long time-scale of interest for tracking the possible buildup of trace species such as nitric acid, NOx, and hydrogen, a segregated time stepping algorithm is used, wherein the velocity field is only updated periodically, and assumed to be in a pseudo steady state. This study first examines the theory of the model, workflow to establish radiolysis reaction network, and initial simulations of the evolutions of thermal fields, hydrogen gas and nitric acid concentrations within unsealed canisters in conditions relevant to the INL INTEC CPP-603 facility over a long period of time. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Xi-cam : a versatile interface for data visualization and analysis

Xi-cam is an extensible platform for data management, analysis and visualization. Xi-cam aims to provide a flexible and extensible approach to synchrotron data treatment as a solution to rising demands for high-volume/high-throughput processing pipelines. The core of Xi-cam is an extensible plugin-based graphical user interface platform which provides users with an interactive interface to processing algorithms. Plugins are available for SAXS/WAXS/GISAXS/GIWAXS, tomography and NEXAFS data. With Xi-cam 's `advanced' mode, data processing steps are designed as a graph-based workflow, which can be executed live, locally or remotely. Remote execution utilizes high-performance computing or de-localized resources, allowing for the effective reduction of high-throughput data. Xi-cam 's plugin-based architecture targets cross-facility and cross-technique collaborative development, in support of multi-modal analysis. Xi-cam is open-source and cross-platform, and available for download on GitHub.

Pandolfi, Ronald J. (ORCID:0000000308248548)↗

From Raw to Curated Data: A Lakehouse Approach for Scientific Workflows

This report provides a technical overview of how to go from raw to curated data in three stages using a lakehouse approach. We focus on the application of open source tools in scientific use cases (while noting parallels to enterprise and commercial alternatives). Our goal is to provide scientific data managers and infrastructure providers with a common frame of reference for understanding and applying modern lakehouse technologies and approaches.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗