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At least 577 records · Page 32

Comparative genomics analysis of drought response between obligate CAM and C 3 photosynthesis plants

Crassulacean acid metabolism (CAM) plants exhibit elevated drought and heat tolerance compared to C 3 and C 4 plants through an inverted pattern of day/night stomatal closure and opening for CO 2 assimilation. However, the molecular responses to water-deficit conditions remain unclear in obligate CAM species. In this study, we presented genome-wide transcription sequencing analysis using leaf samples of an obligate CAM species Kalanchoë fedtschenkoi under moderate and severe drought treatments at two-time points of dawn (2-h before the start of light period) and dusk (2-h before the dark period). Differentially expressed genes were identified in response to environmental drought stress and a whole genome wide co-expression network was created as well. We found that the expression of CAM-related genes was not regulated by drought stimuli in K. fedtschenkoi. Our comparative analysis revealed that CAM species (K. fedtschenkoi) and C 3 species (Arabidopsis thaliana, Populus deltoides ‘WV94’) share some common transcriptional changes in genes involved in multiple biological processes in response to drought stress, including ABA signaling and biosynthesis of secondary metabolites.

59 BASIC BIOLOGICAL SCIENCES↗

Inhomogeneous structural evolution of silver-containing Alpha-MnO2 nanorods in sodium-ion batteries investigated by comparative transmission electron microscopy approach

Alpha-MnO 2 is an attractive cathode candidate for sodium-ion batteries attributed to its unique one-dimensional 2×2 tunnels for facile sodium-ion diffusion, in addition to its incomparable cost advantage. In particular, α-MnO2 shows superior rate capability with silver stabilizing ions at the center of tunnels that improve electrical conductivity. In this work, we directly compare structural transformation of silver-containing α-MnO 2 nanorods (Ag 1.22 Mn 8 O 16-x or L-Ag-HOL and Ag 1.66 Mn 8 O 16-y or H–Ag-HOL), containing higher and lower concentrations of oxygen vacancies respectively, by transmission electron microscopy (TEM). The elaborate comparative and statistical TEM studies eliminate concerns regarding generalization errors and facilitate rational structural development of nanorods with improved functionality. It is found that sodium ions favorably diffuse through the area where oxygen vacancies are concentrated, and the samples with more silver ions and fewer oxygen vacancies (H–Ag-HOL) show more significant structural deformation with more inhomogeneous sodiation. The difference in functional electrochemistry coupled with the observed difference in inter- and intra-nanorod inhomogeneous structural evolution emphasizes the significance of the uniform electrical conductivity of the electrode. This work helps to improve the α-MnO 2 electrode material for sodium-ion batteries as well as suggesting the importance of delicate statistical approaches for TEM investigations.

25 ENERGY STORAGE↗

Pyrochlore 'dynamic spin-ice' Pr{sub 2}Sn{sub 2}O{sub 7} and monoclinic Pr{sub 2}Ti{sub 2}O{sub 7}: A comparative temperature-dependent Raman study

Here we report a temperature-dependent Raman study of the pyrochlore 'dynamic spin-ice' compound Pr{sub 2}Sn{sub 2}O{sub 7} and compare the results with its non-pyrochlore (monoclinic) counterpart Pr{sub 2}Ti{sub 2}O{sub 7}. In addition to phonon modes, we observe two bands associated with electronic Raman scattering involving crystal field transitions in Pr{sub 2}Sn{sub 2}O{sub 7} at {approx}135 and 460 cm{sup -1} which couple strongly to phonons. Anomalous temperature dependence of phonon frequencies that are observed in pyrochlore Pr{sub 2}Sn{sub 2}O{sub 7} are absent in monoclinic Pr{sub 2}Ti{sub 2}O{sub 7}. This, therefore, confirms that the strong phonon-phonon anharmonic interactions, responsible for the temperature-dependent anomalous behavior of phonons, arise due to the inherent vacant sites in the pyrochlore structure. - Abstract: The phonon-phonon anharmonic interaction which is responsible for the temperature-dependent anomalous behavior of phonons, arise due to the inherent vacant sites in the pyrochlore structure. Highlights: > Pyrochlore Pr{sub 2}Sn{sub 2}O{sub 7} and its monoclinic counterpart Pr{sub 2}Ti{sub 2}O{sub 7} are compared. > Raman spectroscopic data reveal temperature-dependent phonon anomalies. > Crystal field transitions in Pr{sub 2}Sn{sub 2}O{sub 7} couple with phonons. > Phonon anomalies are attributed to phonon-phonon anharmonic interactions. > Phonon anharmonicity in pyrochlores arise due to their inherent vacancies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Comparative quantification and statistical analysis of η′ and η precipitates in aluminum alloy AA7075-T651 by TEM and AFM

Quantification of nanometric precipitates in metallic alloys has been traditionally performed using transmission electron microscopy, which is nominally a low throughput technique. This work presents a comparative study of quantification of η′ and η precipitates in aluminum alloy AA7075-T651 using transmission electron microscopy (TEM) and non-contact atomic force microscopy (AFM). AFM quantification was compared with 2-D stereological results reported elsewhere. Also, a method was developed, using specialized software, to characterize nanometric size precipitates observed in dark-field TEM micrographs. Statistical analysis of the quantification results from both measurement techniques supports the use of AFM for precipitate characterization. Once the precipitate stoichiometry has been determined by appropriate analytical techniques like TEM, as it is the case for η′ and η in AA7075-T651, the relative ease with which specimens are prepared for AFM analysis could be advantageous in product and process development, and quality control, where a large number of samples are expected for analysis on a regular basis. - Highlights: • Nanometric MgZn{sub 2} precipitates in AA7075-T651 were characterized using AFM and TEM. • Phase-contrast AFM was used to differentiate metal matrix from MgZn{sub 2} precipitates. • TEM and AFM micrographs were analyzed using commercially available software. • AFM image analysis and TEM 2-D stereology render statistically equivalent results.

36 MATERIALS SCIENCE↗

Comparative SEM and TEM analyses of apatite phases prepared by a multi-sample loading device

Highlights: • A multi-sample loading device which ultrasonically disperses samples was developed. • Comparative EM analyses on various apatite phases were efficiently carried out. • SEM-EDS data revealed distinctive values of O/P and Ca/P intensity ratios. • TEM-SAED data presented characteristic structural features of apatite phases. • Lattice parameters of bone and fossil apatite were affected by CO{sub 3} content. - Abstract: Comparative chemical and structural characterization of various apatite phases from both synthetic and natural sources were carried out by utilizing a multi-sample loading device developed for scanning electron microscopy (SEM) and transmission electron microscopy (TEM) analyses. The device is capable of spraying nanoparticles via ultrasonication, and four separate samples were loaded on a single TEM grid by a masking tool to characterize different apatite phases in consistent instrumental and analytical conditions. SEM energy dispersive spectroscopy (EDS) analysis of the apatite samples revealed distinctive values of O/P and Ca/P intensity ratios except for the fossil apatite due to its high proportion of externally originating phases. Selected area electron diffraction (SAED) pattern analysis presented the characteristic lattice parameters of the apatite phases, especially the bone and fossil apatite which had CO{sub 3}in their chemistry. Analyzing distinctive chemical and structural features among varied apatite phases can be efficiently carried out through electron microscopy with multiple samples on a single TEM grid, and such methods can be employed for characterizing a wider range of materials.

36 MATERIALS SCIENCE↗

Comparative study of fatigue properties of Ti-6Al-4V specimens built by electron beam melting (EBM) and selective laser melting (SLM)

Highlights: • EBM and SLM parts have similar fatigue properties, equivalent to cast alloys. • Surface defects are more critical than unmelted zones and internal small defects. • HIP treatment largely improves lifetimes compared to as-built specimens. - Abstract: Electron Beam Melting (EBM) and Selective Laser Melting (SLM) are two of the most developed powder bed fusion based additive manufacturing processes. In this paper, fatigue properties of Ti-6Al-4V specimens built by EBM and SLM are compared. Several parameters are assessed: processes, manufacturing direction, surface roughness, HIP treatment. Fatigue properties are analyzed in relation with the crack initiation mechanisms identified on each specimen's post-mortem micrographs. Machined specimens show better fatigue properties as surface defects are removed. HIP treatment improves fatigue properties by decreasing the defects size. Small differences in lifetime are observed between horizontal and vertical building directions because of different defect shapes regarding the loading axis. Finally, EBM and SLM parts have approximately the same fatigue properties, which are equivalent to conventional casting processes.

36 MATERIALS SCIENCE↗

Comparative investigation on microstructures and mechanical properties of (TiB + TiC)/Ti-6Al-4V composites from Ti-B4C-C and Ti-TiB2-TiC systems

Highlights: • The (TiB{sub w}+TiC{sub p})/Ti-6Al-4V composites were fabricated from Ti-B{sub 4}C-C and Ti-TiB{sub 2}-TiC systems by reactive hot-pressed sintering. • Microstructures and mechanical properties of the two kinds of composites were comparatively investigated. • The composites from Ti-TiB{sub 2}-TiC system possess higher elastic modulus and Vickers hardness than those from Ti-B{sub 4}C-C system. • The composites from Ti-TiB{sub 2}-TiC system have higher bending strength than the other system while employing same conditions. • The composites from Ti-B{sub 4}C-C system present better abrasion resistance than those from Ti-TiB{sub 2}-TiC system. - Abstract: Two percentages of TiB + TiC reinforced Ti-6Al-4V composites from Ti-B{sub 4}C-C and Ti-TiB{sub 2}-TiC systems were fabricated by reactive hot-pressed sintering. Their microstructures and mechanical properties involving elastic modulus, Vickers hardness, bending strength and wear property were investigated comparatively. The experimental results show that needle-like TiB whiskers and near-equiaxed TiC particles are evenly distributed in the Ti-6Al-4V matrix. The mechanical properties of the (TiB + TiC)/Ti-6Al-4V composites are closely related with the nominal composition and synthesis system of TiB + TiC reinforcement and the microstructures of composites. With increasing the nominal volume fraction of reinforcement, both elastic modulus and Vickers hardness increase more or less and the bending strength decreases in varying degrees. A certain increase of pores in the composites with the sintering temperature increasing to 1300 °C can markedly affect the bending strength. Moreover, no matter what the sintering temperature and nominal volume fraction of reinforcement, the elastic modulus and Vickers hardness of composites from the Ti-TiB{sub 2}-TiC system are higher than those from the Ti-B{sub 4}C-C system. Similarly, the composites from the Ti-B{sub 4}C-C system present better abrasion resistance than those from the Ti-TiB{sub 2}-TiC system due to the difference of interfacial bonding between the TiC particles and Ti-6Al-4V matrix in the two kinds of composites.

36 MATERIALS SCIENCE↗

The growth of benzophenone crystals by Sankaranarayanan-Ramasamy (SR) method and slow evaporation solution technique (SEST): A comparative investigation

Highlights: Black-Right-Pointing-Pointer Benzophenone single crystal was grown by Sankaranarayanan-Ramasamy method which has the sizes of 1060 mm length and 55 mm diameter for the first time. Black-Right-Pointing-Pointer The conventional and SR-grown benzophenone crystals were characterized and compared using HRXRD, etching, laser damage threshold, microhardness, UV-transmittance, birefringence and dielectric analysis. Black-Right-Pointing-Pointer The SR-grown benzophenone crystal has higher LDT, microhardness, transparency, dielectric permittivity, birefringence and lower FWHM, EPD, dielectric loss than the crystal grown by conventional method. Black-Right-Pointing-Pointer The probable reason for higher crystalline perfection in SR-grown crystal was discussed. -- Abstract: Longest unidirectional Left-Pointing-Angle-Bracket 1 0 0 Right-Pointing-Angle-Bracket benzophenone (BP) crystal having dimension of 1060 mm length and 55 mm diameter was grown by Sankaranarayanan-Ramasamy method. The growth rate was measured by monitoring the elevation of the crystal-solution interface at different temperatures. The high resolution X-ray diffraction and etching measurements indicate that the unidirectional grown benzophenone crystal has good crystalline perfection and less density of defects. The optical damage threshold of SEST and SR grown BP crystals has been investigated and found that the SR grown benzophenone crystal has higher laser damage threshold value than the conventional method grown crystal. Microhardness measurement shows that crystals grown by SR method have a higher mechanical stability than the crystals grown by SEST method. Dielectric permittivity and birefringence are high in SR grown crystal compared to SEST grown BP crystal. The UV-vis-NIR results show that SR method grown crystal exhibits 7% higher transmittance as against crystals grown by conventional method.

36 MATERIALS SCIENCE↗

A comparative study of physico-chemical properties of CBD and SILAR grown ZnO thin films

Graphical abstract: Schematic model indicating ZnO nanorods by CBD (Z{sub 1}) and nanograins by SILAR (Z{sub 2}). - Highlights: • Simple methods for the synthesis of ZnO thin films. • Comparative study of physico-chemical properties of ZnO thin films prepared by CBD and SILAR methods. • CBD outperforms SILAR method. - Abstract: In the present work, nanocrystalline zinc oxide (ZnO) thin films have been successfully deposited onto glass substrates by simple and economical chemical bath deposition (CBD) and successive ionic layer adsorption reaction (SILAR) methods. These films were further characterized for their structural, optical, surface morphological and wettability properties. The X-ray diffraction (XRD) patterns for both CBD and SILAR deposited ZnO thin films reveal the highly crystalline hexagonal wurtzite structure. From optical studies, band gaps obtained are 2.9 and 3.0 eV for CBD and SILAR deposited thin films, respectively. The scanning electron microscope (SEM) patterns show growth of well defined randomly oriented nanorods and nanograins on the CBD and SILAR deposited samples, respectively. The resistivity of CBD deposited films (10{sup 2} Ω cm) is lower than that of SILAR deposited films (10{sup 5} Ω cm). Surface wettability studies show hydrophobic nature for both films. From the above results it can be concluded that CBD grown ZnO thin films show better properties as compared to SILAR method.

36 MATERIALS SCIENCE↗

Synthesis, structure and photoluminescence of (PLAGH){sub 2}[ZnCl{sub 4}] and comparative analysis of photoluminescence properties with tris(2,2′-bipyridine)ruthenium(II)

Highlights: • New zinc(II) complex with pyridoxalaminoguanidine was synthesized. • The enhancement of the photoluminescence due to the compound formation was achieved. • Very high photoluminescence of Zn(II) compound was noticed. • Comparative analysis of photoluminescence with tris(2,2′-bipyridine) ruthenium(II) was provided. - Abstract: The first compound of zinc(II) containing pyridoxalaminoguanidine has been synthesized and characterized by elemental analysis, infrared spectra, conductometric measurements and X-ray crystallography. Single crystals of the compound were obtained in the reaction of methanolic solution of zinc(II) chloride and pyridoxalaminoguanidine hydrochloride. In this compound the coordination of chelate ligand is absent and tetrachlorido complex of zinc(II) with pyridoxalaminuguanidinium cation as contraion is obtained. Photoluminescence spectra were measured. Lorentzian multipeak technique was used to determine peak wavelengths and their intensities. Photoluminescence spectroscopy upon 325, 488 and 514 nm laser excitation light was used to obtain results. This novel compound of zinc(II) was compared to the well-known organic light emitting diode material—ruthenium(II) complex with bypiridine i.e., tris(2,2′-bipyridine)ruthenium(II), under the same circumstances and the identical experimental setup. A scheme of energy levels and transitions is proposed to explain the obtained experimental results.

36 MATERIALS SCIENCE↗

Under conditions of large geometric miss, tumor control probability can be higher for static gantry intensity-modulated radiation therapy compared to volume-modulated arc therapy for prostate cancer

The purpose of this work was to compare static gantry intensity-modulated radiation therapy (IMRT) with volume-modulated arc therapy (VMAT) in terms of tumor control probability (TCP) under scenarios involving large geometric misses, i.e., those beyond what are accounted for when margin expansion is determined. Using a planning approach typical for these treatments, a linear-quadratic–based model for TCP was used to compare mean TCP values for a population of patients who experiences a geometric miss (i.e., systematic and random shifts of the clinical target volume within the planning target dose distribution). A Monte Carlo approach was used to account for the different biological sensitivities of a population of patients. Interestingly, for errors consisting of coplanar systematic target volume offsets and three-dimensional random offsets, static gantry IMRT appears to offer an advantage over VMAT in that larger shift errors are tolerated for the same mean TCP. For example, under the conditions simulated, erroneous systematic shifts of 15 mm directly between or directly into static gantry IMRT fields result in mean TCP values between 96% and 98%, whereas the same errors on VMAT plans result in mean TCP values between 45% and 74%. Random geometric shifts of the target volume were characterized using normal distributions in each Cartesian dimension. When the standard deviations were doubled from those values assumed in the derivation of the treatment margins, our model showed a 7% drop in mean TCP for the static gantry IMRT plans but a 20% drop in TCP for the VMAT plans. Although adding a margin for error to a clinical target volume is perhaps the best approach to account for expected geometric misses, this work suggests that static gantry IMRT may offer a treatment that is more tolerant to geometric miss errors than VMAT.

61 RADIATION PROTECTION AND DOSIMETRY↗

A Comparative Tribo-Mechanical Behavior Analysis of Laser Cladded Nitronic 60 Coating Against Wrought Nitronic 60 Alloy

In this study the tribological and mechanical behavior of a laser cladded Nitronic 60 coating on maraging steel is compared to that of a wrought Nitronic 60 alloy. A multi-layer Nitronic 60 coating was deposited using laser directed energy deposition, and its microstructure, porosity, and microhardness were characterized. The microhardness of the coated region in the laser cladded Nitronic 60 varied between 270-300 HV whereas that for wrought form was 230 HV. Controlled tribological tests under motor oil lubricated conditions were conducted at both room and elevated temperatures. The laser cladded Nitronic coating exhibited poorer wear resistance at room temperature but higher wear resistance at elevated temperature as compared to the wrought Nitronic alloy. Severe plastic deformation and fracture was observed on the laser cladded coating after the wear tests at both temperatures. Wear mechanisms were investigated based on the morphological and compositional characterization of the wear tracks.

36 MATERIALS SCIENCE↗

Linking microstructure to creep behavior in vertically and horizontally built LPBF Haynes 282 compared with wrought material via θ -projection

Laser Powder Bed Fusion (LPBF) has emerged as a promising route for fabricating intricate geometries in high-performance alloys. Haynes 282 (H282) is a strong candidate for applications such as heat exchangers or engines due to its excellent creep strength and thermal stability; however, the long-term creep behavior of LPBF-processed H282 remains poorly understood. In this study, the θ -projection method is used to analyze and extrapolate the creep behavior of vertically built LPBF, horizontally built LPBF, compared to wrought H282 tested at 816 °C. Vertically built LPBF H282 exhibits the lowest minimum creep rate (MCR), while the horizontally built condition shows a higher MCR comparable to that of wrought H282. Despite these differences, both LPBF conditions exhibit significantly shorter rupture life and reduced rupture strain than the wrought material, with the most severe degradation observed in the horizontal builds, consistent with an earlier onset of tertiary creep and accelerated strain-rate evolution. Microstructural characterization reveals that both LPBF and wrought H282 exhibit abundant twin-related boundary character; however, their grain boundary topologies differ markedly. The wrought alloy contains a higher fraction of low-angle grain boundaries and continuous twin lamellae, whereas the LPBF microstructure is characterized by a suppressed low-angle boundary population and fragmented twin-related boundaries embedded within irregular high-angle grain boundary networks. Fractographic analysis further reveals predominantly intergranular cracking in LPBF H282, accompanied by grain-boundary-decorated carbides, Al 2 O 3 inclusions, and high-aspect-ratio pores. These results demonstrate that grain boundary topology, rather than minimum creep rate alone, plays a critical role in governing creep damage accumulation and rupture behavior in LPBF and wrought H282.

Creep↗

The comparative strength and fracture toughness properties of commercial 95W-3.5Ni1.5Fe and 95W-3.5Ni1.5Cu tungsten heavy alloys

Due to the sharp surface cracks resulting from high and cyclic thermal loads, fracture toughness is a crucial property for fusion divertor materials. Tungsten heavy alloys (WHA) have emerged as a leading candidate for plasma facing component applications. Both the WNiFe and WNiCu WHAs have been considered. However, there is no fracture toughness data in the literature on the WNiCu WHA. Therefore, maximum load elastic–plastic fracture toughness (K Jm ) of a commercial 95W-3.5Ni1.5Cu (NiCu) WHA plate is reported here for the first time. The NiCu WHA K Jm is compared to a corresponding K Jm for commercial 95W-3.5Ni1.5Fe (NiFe) WHA, along with comparisons of their respective microstructures, microhardness, and tensile properties. Although their room temperature yield strengths are similar (≈ 600 MPa), the NiFe WHA has higher ultimate stress (818 MPa vs. 642 MPa) and total elongation (8% vs. 1.2%) compared to the NiCu WHA. Most notably, the room temperature elastic–plastic K Jm for the NiFe WHA of ≈ 80 ± 8 MPa$\sqrt{m}$, is nearly twice that of the NiCu WHA at ≈ 47 ± 4 MPa$\sqrt{m}$. Further, while the NiFe WHA experienced stable ductile tearing, the crack propagated unstably (approximately elastically) after reaching the maximum load in the NiCu WHA. The higher K Jm of the NiFe WHA is attributed to its higher flow stress and ductility, along with the energy dissipation and microcrack dilatational stress shielding, provided by a wide distribution of arrested process-zone microcracks, which are largely absent in the NiCu WHA. Since, the 95W-NiFe WHA has distinctly better mechanical properties than 95W-NiCu WHA, it is a more suitable candidate for the fusion reactor application.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Experiment-modeling studies comparing energy dissipation in the DIII-D SAS and SAS-VW divertors

Recent DIII-D experiments on Small Angle Slot (SAS) divertors have confirmed that a combination of divertor closure and target shaping can enhance cooling across the divertor target and increase energy dissipation, but with significant dependence on B T (toroidal magnetic field) direction. In these novel divertors, the roles of closure, target shaping, drifts, and scale lengths are all interconnected in optimizing dissipation, with the separatrix electron density n eSEP being the key parameter associated with the level of dissipation/detachment. After modifying the original flat-targeted graphite SAS to include a V shape with a tungsten coating on the outer side of the divertor (SAS-VW), matched series of discharges were run to compare to detailed SOLPS-ITER modeling. Experimentally, when run as designed with the outer strike point at the slot vertex, SAS-VW requires nearly identical n eSEP for detachment as the original SAS, with little difference in dissipation for the new geometry. This is in contrast to (1) earlier modeling predictions that a small change of the SAS geometry to a V shape should enhance dissipation at the same n eSEP for magnetic configurations having better H-mode access (ion B × ∇B drift directed into the divertor), and (2) despite the achievement of significantly higher (2-7x) neutral pressures and compression in the SAS-VW slot. Comparisons of experimental density scans to the most recent SOLPS-ITER modeling with ExB drifts show reasonable agreement for dissipation/detachment onset when using separatrix density as the independent parameter. In order to help understand the discrepancy in modeled vs actual performance for the new configuration, additional measurements varying gas injection location and impurity injection were undertaken. In-slot D 2 gas fueling is more effective (5–22 %) in promoting detachment, in accord with modeling. In-slot impurity injection (N 2 or Ne) can yield 30 % lower core Z eff and 15 % less confinement degradation after detachment compared to main chamber puffing, as well as relatively lower tungsten leakage from the divertor. Modeling can also reproduce the improved detachment seen as the strike point moves inboard of the slot vertex. While we can explain the effects of the most important parameters causing energy dissipation in these slot divertors, it remains that many aspects of their behavior cannot be accurately modeled using state-of-art codes such as SOLPS-ITER. This is of concern for future model-driven designs utilizing similar V-shaped geometries.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Comparative evaluation and selection of heat exchangers using multicriteria decision-making

Here, this study presents a well-structured method for comparing and selecting Heat Exchanger (HE) technologies for Integrated Energy Systems (IES). The decision to select a HE for a particular IES configuration can vary greatly depending not only on engineering requirements but also on customer’s specific demand. In other words, the HE selection for IES requires a multicriteria decision-making approach, taking into account diverse technical, economic, and safety aspects, as well as the relative priorities considered by energy users. This study employs a HE evaluation approach combining multicriteria decision-making techniques widely used in various industries: quality function deployment (QFD) and analytic hierarchy process (AHP) techniques. Of particular interest is the use of the proposed method to select a high-temperature HEs that couples advanced nuclear reactors and industrial processes. To build a practical basis for comparing HEs within the proposed framework, efforts were made to identify the various HEs requirements for IES purposes. In addition, leveraging the insights obtained from the literature review and the market survey of commercial HE suppliers, a knowledge base was built to facilitate the comparison of each requirement across various HE designs. Also, evaluation metrics were identified for HE requirements with robust rational to enhance the quality of decisions made throughout the proposed evaluation process. The evaluation procedure and knowledge base described in this study can provide a useful basis for those interested in screening the appropriate HE designs for various IES scenarios.

Analytic Hierarchy Process (AHP)↗

A comparative reactivity study of 1-alkene fuels from ethylene to 1-heptene

In this work, a comparative reactivity study of 1-alkene fuels from ethylene to 1-heptene has been performed using ignition delay time (IDT) measurements from both a high-pressure shock tube and a rapid compression machine, at an equivalence ratio of 1.0 in ‘air’, at a pressure of 30 atm in the temperature range of 600–1300 K. At low temperatures (< 950 K), the results show that 1-alkenes with longer carbon chains show higher fuel reactivity, with 1-pentene being the first fuel to show negative temperature coefficient (NTC) behavior followed by 1-hexene and 1-heptene. At high temperatures (> 950 K), the experimental results show that all of the fuels except propene show very similar fuel reactivity, with the IDTs of propene being approximately four times longer than for all of the other 1-alkenes. To analyze the experimental results, a chemistry mechanism has been developed using consistent rate constants for these alkenes. At 650 K, flux analyses show that hydroxyl radicals add to the double bond, followed by addition to molecular oxygen producing hydroxy-alkylperoxy radicals, which can proceed via the Waddington mechanism or alternate internal H-atom isomerizations in chain branching similar to those for alkanes. We have found that the major chain propagation reaction pathways that compete with chain branching pathyways mainly produce hydroxyl rather than hydroperoxyl radicals, which explains the less pronounced NTC behavior for larger 1-alkenes compared to their corresponding alkanes. At 1200 K, flux analyses show that the accumulation of hydroperoxyl radicals is important for the auto-ignition of 1-alkenes from propene to 1-heptene. The rate of production of hydroperoxyl radicals for 1-alkenes from 1-butene to 1-heptene is higher than that for propene, which is due to the longer carbon chain facilitating hydroperoxyl radical formation via more efficient reaction pathways. This is the major reason that propene presents lower fuel reactivity than the other 1-alkenes at high temperatures.

1-Alkene↗

Large Scale Comparative Visualisation of Regulatory Networks with TRNDiff

The advent of Next Generation Sequencing (NGS) technologies has seen explosive growth in genomic datasets, and dense coverage of related organisms, supporting study of subtle, strain-specific variations as a determinant of function. Such data collections present fresh and complex challenges for bioinformatics, those of comparing models of complex relationships across hundreds and even thousands of sequences. Transcriptional Regulatory Network (TRN) structures document the influence of regulatory proteins called Transcription Factors (TFs) on associated Target Genes (TGs). TRNs are routinely inferred from model systems or iterative search, and analysis at these scales requires simultaneous displays of multiple networks well beyond those of existing network visualisation tools [1]. In this paper we describe TRNDiff, an open source system supporting the comparative analysis and visualization of TRNs (and similarly structured data) from many genomes, allowing rapid identification of functional variations within species. The approach is demonstrated through a small scale multiple TRN analysis of the Fur iron-uptake system of Yersinia, suggesting a number of candidate virulence factors; and through a larger study exploiting integration with the RegPrecise database (http://regprecise.lbl.gov; [2]) - a collection of hundreds of manually curated and predicted transcription factor regulons drawn from across the entire spectrum of prokaryotic organisms.

Bioinformatics, Visualisation, Transcription, Regu↗