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At least 559 records · Page 31

Microbial detection with low molecular weight RNA

The need to monitor microorganisms in the environment has increased interest in assays based on hybridization probes that target nucleic acids (e.g., rRNA). We report the development of liquid-phase assays for specific bacterial 5S rRNA sequences or similarly sized artificial RNAs (aRNAs) using molecular beacon technology. These beacons fluoresce only in the presence of specific target sequences, rendering as much as a 27-fold fluorescence enhancement. The assays can be used with both crude cell lysates and purified total RNA preparations. Minimal sample preparation (e.g., heating to promote leakage from cells) is sufficient to detect many Gram-negative bacteria. Using this approach it was possible to detect an aRNA-labeled Escherichia coli strain in the presence of a large background of an otherwise identical E. coli strain. Finally, by using a longer wavelength carboxytetramethylrhodamine beacon it was possible to reduce the fraction of the signal due to cellular autofluorescence to below 0.5%.

NASA Discipline Life Sciences Technologies↗

Biochemical Detection and Identification False Alarm Rate Dependence on Wavelength Using Laser Induced Fluorescence

Most organic and many inorganic materials absorb strongly in specific wavelength ranges in the deep UV between about 220nm and 300nm. Excitation within these absorption bands results in native fluorescence emission. Each compound or composite material, such as a bacterial spore, has a unique excitation-emission fingerprint that can be used to provide information about the material. The sensitivity and specificity with which these materials can be detected and identified depends on the excitation wavelength and the number and location of observation wavelengths.We will present data on our deep ultraviolet Targeted Ultraviolet Chemical Sensors that demonstrate the sensitivity and specificity of the sensors. In particular, we will demonstrate the ability to quantitatively differentiate a wide range of biochemical agent targets against a wide range of background materials. We will describe the relationship between spectral resolution and specificity in target identification, as well as simple, fast, algorithms to identify materials.Hand-held, battery operated instruments using a deep UV laser and multi-band detection have been developed and deployed on missions to the Antarctic, the Arctic, and the deep ocean with the capability of detecting a single bacterial spore and to differentiate a wide range of organic and biological compounds.

native flourescence↗

Large Interferometer for Exoplanets (Life) I. Improved Exoplanet Detection Yield Estimates for A Large Mid-Infrared Space-Interferometer Mission

Context. One of the long-term goals of exoplanet science is the atmospheric characterization of dozens of small exoplanets in order to understand their diversity and search for habitable worlds and potential biosignatures. Achieving this goal requires a space mission of sufficient scale that can spatially separate the signals from exoplanets and their host stars and thus directly scrutinize the exoplanets and their atmospheres. Aims. We seek to quantify the exoplanet detection performance of a space-based mid-infrared (MIR) nulling interferometer that measures the thermal emission of exoplanets. We study the impact of various parameters and compare the performance with that of large single-aperture mission concepts detecting exoplanets in reflected light. Methods. We have developed an instrument simulator that considers all major astrophysical noise sources and coupled it with Monte Carlo of a synthetic exoplanet population around main-sequence stars within 20 pc. This allows us to quantify the number (and types) of exoplanets that our mission concept could detect over a certain time period. Two different scenarios to distribute the observing time among the stellar targets are discussed and different apertures sizes and wavelength ranges are considered. Results. An interferometer consisting of four 2 m apertures working in the 4–18.5 μ.m wavelength range with a total instrument throughput of 5% could detect up to ≈550 exoplanets with radii between 0.5 and 6 R ⊕ with an integrated S/N ≥ 7. At least ≈160 of the detected exoplanets have radii ≤1.5 R ⊕ . Depending on the observing scenario, ≈25–45 rocky exoplanets (objects with radii between 0.5 and 1.5 R ⊕ ) orbiting within the empirical habitable zone (eHZ) of their host stars are among the detections. With four 3.5 m apertures, the total number of detections can increase to up to ≈770, including ≈60–80 rocky eHZ planets. With four times 1 m apertures, the maximum detection yield is ≈315 exoplanets, including ≤20 rocky eHZ planets. The vast majority of small, temperate exoplanets are detected around M dwarfs. The impact of changing the wavelength range to 3–20 μm or 6–17 μm on the detection yield is negligible. Conclusions. A large space-based MIR nulling interferometer will be able to directly detect hundreds of small, nearby exoplanets, tens of which would be habitable world candidates. In terms of predicted detection yield, such a mission can compete with large single-aperture reflected light missions. Given that we assumed only 2.5 years for the search phase, a significant sub-set of the detected exoplanets can be followed-up in a second mission phase to obtain high SNR thermal emission spectra, leveraging the superior diagnostic power of the MIR wavelength regime compared to shorter wavelengths.

planets and satellites: terrestrial planets↗

Measurement of the spectral signature of small carbon clusters at near and far infrared wavelengths

A significant percentage of the carbon inventory of the circumstellar and interstellar media may be in the form of large refractory molecules (or small grains) referred to as carbon clusters. At the small end, uneven numbers of carbon atoms seem to be preferred, whereas above 12 atoms, clusters containing an even number of carbon atoms appear to be preferred in laboratory chemistry. In the lab, the cluster C-60 appears to be a particularly stable form and has been nicknamed Bucky Balls because of its resemblance to a soccer ball and to geodesic domes designed by Buckminster Fuller. In order to investigate the prevalence of these clusters, and their relationship to the polycyclic aromatic hydrocarbons (PAHs) that have become the newest focus of IR astronomy, it is necessary to determine the spectroscopic characteristics of these clusters at near and far infrared wavelengths. Described here is the construction of a near to far IR laser magnetic resonance spectrometer that has been built at the University of California Berkeley in order to detect and characterize these spectra. The equipment produces carbon clusters by laser evaporation of a graphitic target. The clusters are then cooled in a supersonic expansion beam in order to simulate conditions in the interstellar medium (ISM). The expansion beam feeds into the spectrometer chamber and permits concentrations of clusters sufficiently high as to permit ultra-high resolution spectroscopy at near and far IR wavelengths. The first successful demonstration of this apparatus occurred last year when the laboratory studies permitted the observational detection of C-5 in the stellar outflow surrounding IRC+10216 in the near-IR. Current efforts focus on reducing the temperature of the supersonic expansion beam that transport the C clusters evaporated from a graphite target into the spectrometer down to temperatures as low as 1 K.

Tarter, J.↗

Thin membrane sensor with biochemical switch

A modular biosensor system for chemical or biological agent detection utilizes electrochemical measurement of an ion current across a gate membrane triggered by the reaction of the target agent with a recognition protein conjugated to a channel blocker. The sensor system includes a bioresponse simulator or biochemical switch module which contains the recognition protein-channel blocker conjugate, and in which the detection reactions occur, and a transducer module which contains a gate membrane and a measuring electrode, and in which the presence of agent is sensed electrically. In the poised state, ion channels in the gate membrane are blocked by the recognition protein-channel blocker conjugate. Detection reactions remove the recognition protein-channel blocker conjugate from the ion channels, thus eliciting an ion current surge in the gate membrane which subsequently triggers an output alarm. Sufficiently large currents are generated that simple direct current electronics are adequate for the measurements. The biosensor has applications for environmental, medical, and industrial use.

Case, George D.↗

Development and Airborne Demonstration of the Concurrent Artificially-Intelligent Spectrometry and Adaptive Lidar System: Advancing Lidar Capabilities for the STV Observing System

We report on the design, build and planned airborne demonstration of a spaceflight-prototype Concurrent Artificially-intelligent Spectrometry and Adaptive Lidar System (CASALS). The CASALS lidar is an Adaptive Wavelength Scanning Lidar (AWSL) operating in push broom mode. The demonstration has three major goals: advance the Technical Readiness Level of the AWSL hardware, validate its measurement performance and mature algorithms and methods needed for the Surface Topography and Vegetation (STV) observing system. AWSL acquires parallel tracks of surface heights by rapidly steering a laser beam across a swath. A 1040nm-centered laser is tuned across 30nm and carved into 2-ns pulses, the pulse energy is fiber amplified and the pulses are dispersed cross-track using a non-mechanical wavelength-to-angle grating. For the spaceflight system the beam will be pointable to 1200 10m footprints across a 7km swath. For the airborne demonstration there will be 256 0.7m footprints across a 110m swath. In both cases the footprints overlap across- and along-track for uniform target illumination. For the airborne demonstration a steering mirror will increase the accessible swath width to 4km. At the receiver, solar radiation is filtered with a narrow-slit grating-spectrometer and the footprints are imaged onto a linear-mode, photon-sensitive HgCdTe APD-array. The received pulses are time-division-multiplexed to a few high-speed analog-to-digital converters to record waveforms. Spaceflight and airborne CASALS are designed to nominally detect 20 photons per pulse and, by averaging 27 overlapping footprints, achieve 2cm flat target range precision and high-quality vegetation structure waveforms The AWSL will be flown in the summer of 2024, along with a Headwall VNIR-SWIR hyperspectral sensor imaging a 4km wide swath, at NEON eddy covariance flux towers in the U.S. mid-Atlantic where high resolution hyperspectral and lidar data, acquired annually, are available for validation.

Guangning Yang↗

Hybrid solution for high-speed target acquisition and identification systems

A typical hierarchy for a general object recognition problem consists of object detection, classification and identification. This paper establishes necessary building blocks required for high-speed object recognition applications. An architecture that combines digital and optical processing, exploiting current image processing techniques for detection and classification, and optical processing hardware is described. An optical processing scheme is suggested for the identification aspect. Numerical results of each proposed concept are presented.

Udomkesmalee, Suraphol↗

Investigating the Effects of Gamma Radiation on Selected Chemicals for Use in Biosignature Detection Instruments on the Surface of Jupiter's Moon Europa

Jupiter's moon Europa is a prime target for the search for potential signs of life in the solar system. The Europa Lander Science Definition Team Report outlined investigations and measurement requirements on a future Europa Lander and has led us to consider application of powerful techniques such as pyrolysis and derivatization gas chromatography mass spectrometry (GC-MS) and laser desorption mass spectrometry (LD-MS) to elucidate the organic composition of near-surface ice and minerals. Definitive identification of chemical biosignatures using such techniques is strongly enabled by the use of various chemicals, such as perfluorotributylamine (PFTBA) for the MS calibration, α-cyano-hydroxycinnamic acid (CHCA) for matrix-assisted laser desorption and ionization (MALDI) and N,N-dimethylformamide dimethyl acetal (DMF-DMA), N-tert-butyldimethylsilyl-N-methyltrifluoroacetamide (MTBSTFA) and tetramethylammonium hydroxide (TMAH) for wet chemistry GC-MS protocols. The jovian radiation environment is known to represent a uniquely challenging risk to mission performance and lifetime, principally due to high radiation levels. To assess the potential ionizing radiation damage to these important chemicals, we tested their effectiveness following gamma radiation exposure doses up to the anticipated Europa Lander rating requirement of 300 krad(Si). The chemicals were sealed in glass ampules under vacuum (<10 mTorr), to reduce trapped oxygen gas, as the oxidation by O2 may be enhanced in the presence of radiation. We report that all five chemicals exposed to total ionizing doses of 0, 150 and 300 krad(Si) maintained their full effectiveness, and no significant degradation was observed.

Radiation↗

Simulation of an enhanced TCAS 2 system in operation

Described is a computer simulation of a Boeing 737 aircraft equipped with an enhanced Traffic and Collision Avoidance System (TCAS II). In particular, an algorithm is developed which permits the computer simulation of the tracking of a target airplane by a Boeing 373 which has a TCAS II array mounted on top of its fuselage. This algorithm has four main components: namely, the target path, the noise source, the alpha-beta filter, and threat detection. The implementation of each of these four components is described. Furthermore, the areas where the present algorithm needs to be improved are also mentioned.

Rojas, R. G.↗

An electromagnetic noncontacting sensor for thickness measurement in a dispersive medium

This paper describes a general purpose imaging technology developed by the U.S. Bureau of Mines (USBM) that, when fully implemented, will solve the general problem of 'seeing into the earth.' A first-generation radar coal thickness sensor, the RCTS-1, has been developed and field-tested in both underground and highwall mines. The noncontacting electromagnetic technique uses spatial modulation created by moving a simple sensor antenna in a direction along each axis to be measured while the complex reflection coefficient is measured at multiple frequencies over a two-to-one bandwidth. The antenna motion imparts spatial modulation to the data that enables signal processing to solve the problems of media, target, and antenna dispersion. Knowledge of the dielectric constant of the media is not necessary because the electrical properties of the media are determined automatically along with the distance to the target and thickness of each layer of the target. The sensor was developed as a navigation guidance sensor to accurately detect the coal/noncoal interface required for the USBM computer-assisted mining machine program. Other mining applications include the location of rock fractures, water-filled voids, and abandoned gas wells. These hazards can be detected in advance of the mining operation. This initiating technology is being expanded into a full three-dimensional (3-D) imaging system that will have applications in both the underground and surface environment.

Chufo, Robert L.↗

Neural mechanisms of kinesthesia

Our primary interest is in where the signals for position and movement of the limbs originate and how the information is encoded. Humans can independently sense the positions and movements of their limbs in the absence of vision, and their senses are derived from mechanoreceptors located in the limbs. Receptors in muscles, skin and joints are potential sources of position and movement signals, but how (and whether) each of these groups contributes to kinesthesia remains uncertain. Recent evidence indicates that a sense of static-position derives from length receptors in muscle, whereas receptors in the skin, and possibly though not likely the joints, can signal movement of a limb but not its static position. At present, we are examining the consequences of not having a static-position sense at the fingers apart from an inability to detect very slow displacements. Using a more demanding test, we have found no substantial difference in the accuracy of reproducing target positions passively imposed on the MCP joint and the proximal interphalangeal (PIP) joint of the index finger. Our working hypothesis is that subjects normally use movement sense mechanisms to detect displacements, probably because they are faster, but how (or whether) subjects manage to obtain an absolute position reference with only a movement sense available remains unknown and is an issue under investigation.

Clark, Francis J.↗

Good Enough for the X-38, but Made for Commercial Aircraft

Aircraft Belts, Inc. (ABI), of Kemah, Texas, was looking for a way to ensure the safety of its customers by developing a thorough test system for aviation restraint systems. Previous safety restraint test methods did not properly measure the load distribution placed on the restraints, leaving an unknown factor in meeting safety standards. ABI needed to improve its testing methods and update its test equipment. Through a partnership with NASA's Johnson Space Center Technical Outreach Program, the need was met. With the assistance of NASA engineers, ABI developed a hydraulic test system that provides the consumer with in-depth data about the load placed on the restraint system throughout the duration of the test. The old systems were only able to detect if the belts could sustain the applied force and could not target the problem of providing load data. In comparison, the new system modeled after the one used by NASA, can collect data that tells exactly what went wrong with belts that break and why. Depending on the test requirements of various restraint components, the system can exert a subjected force ranging from merely a few pounds to thousands. The test force can be applied to an entire safety restraint system or to its individual parts, including, stitching, webbing, and hardware.

Source record↗

Monitoring and Detecting X-ray Transients with the Swift Observatory

Swift is a multi-wavelength observatory specifically designed to detect transients sources in the gamma-ray energy band 15-200 keV. The primary goals of the mission involve gamma ray burst (GRB) astronomy, namely to determine the origin of GRBs and their afterglows, and use bursts to probe the early Universe. However, Swift will also discover new X-ray transient sources, and it will be possible to bring Swift's considerable multi-wavelength capabilities to bear on these sources, and those discovered by other means. The Burst Alert Telescope (BAT) is a coded mask instrument sensitive to 15-200 keV gamma rays, and has a field of view which covers approximately 1/8th of the sky in a single pointing. Over a typical observing day, the almost the entire sky will be observed and monitored for new transient sources. Sources will be detected within several hours of observation. The two narrow field instruments, the X-ray Telescope and Ultra-Violet Optical Telescope, can provide sensitive simultaneous imaging and spectroscopy observations in the optical through soft X-ray bands. The Swift science operations team will entertain requests for targets of opportunity for sources which are astrophysically significant. Swift will be ideally suited for the detection of transients which produce hard X-rays, such as black hole binaries and some neutron star systems.

Markwardt, Craig↗

Sub-micron surface plasmon resonance sensor systems

Wearable or implantable devices combining microfluidic control of sample and reagent flow and micro-cavity surface plasmon resonance sensors functionalized with surface treatments or coatings capable of specifically binding to target analytes, ligands, or molecules in a bodily fluid are provided. The devices can be used to determine the presence and concentration of target analytes in the bodily fluids and thereby help diagnose, monitor or detect changes in disease conditions.

Glazier, James A.↗

Texas Spectroscopic Search for Lyα Emission at the End of Reionization. II. The Deepest Near-infrared Spectroscopic Observation at z ≳ 7

Realizing the utility of Lyα emission to trace the evolution of the intergalactic medium (IGM) during the epoch of reionization requires deep spectroscopy across the boundary of optical and near-infrared (NIR) spectrographs at z ∼ 7.2 when Lyα emission is at ∼1 μm. Our Texas Spectroscopic Search for Lyα Emission at the End of Reionization includes 18 nights of deep spectroscopic observations using the Keck DEIMOS (optical) and MOSFIRE (NIR) spectrographs. Within this data set we observe Lyα emission from 183 photometric-redshift-selected galaxies at z = 5.5–8.3 from the Cosmic Assembly Near infrared Deep Extragalactic Legacy Survey. Our overlapping MOSFIRE observations, over 84 galaxies in total, provide the deepest NIR spectroscopic data yet obtained for Lyα from galaxies z > 7, with >16 hr integration time for four observed galaxies. Here we analyze these four targets, and we report the discovery of a new z = 7.60 Lyα detection as well as provide an updated observation of the previously confirmed z = 7.51 Lyα emission from Finkelstein et al. with a ∼3× longer exposure time. Our analysis of these Lyα emission-line profiles reveals a significant asymmetric shape. The detection of Lyα from two out of three bright sources (MUV < −20.25) could imply that these bright galaxies inhabit ionized bubbles in a partially neutral IGM, although deeper exposures may reveal Lyα emission in the fainter source.

Intae Jung↗

Intrinsic Lyα Profiles of High-velocity G, K, and M Dwarfs

Observations of HILymanα, the brightest UV emission line of late-type stars, are critical for understanding stellar chromospheres and transition regions, modeling photochemistry in exoplanet atmospheres, and measuring the abundances of neutral hydrogen and deuterium in the interstellar medium. Yet Lyαobservations are notoriously challenging owing to severe attenuation from interstellar gas, hindering our understanding of this important emission line’s basic morphology. We present high-resolution far- and near-UV spectroscopy of five G, K, and M dwarfs with radial velocities large enough to Doppler-shift the stellar Lyαemission line away from much of the interstellar attenuation, allowing the line core to be directly observed. We detect self-reversal in the Lyαemission-line core for all targets, and we show that the self-reversal depth decreases with increasing surface gravity. Mg II self-reversed emission-line profiles provide some useful information to constrain the Lyαline core, but the differences are significant enough that Mg II cannot be used directly as an intrinsic Lyαtemplate during reconstructions. We show that reconstructions that neglect self-reversal could overestimate intrinsic Lyαfluxes by as much as 60%–100% for G and K dwarfs and 40%–170% for M dwarfs. The five stars of our sample have low magnetic activity and subsolar metallicity; a larger sample size is needed to determine how sensitive these results are to these factors.

Allison Youngblood↗

Synchronized target subsystem for automated docking systems

A synchronized target subsystem for use in an automated docking or station keeping system for docking a chase vehicle with a target vehicle wherein the chase vehicle is provided with a video camera which provides adjacent frames each having a predetermined time duration. A light source mounted on the target vehicle flashes at a frequency which has a time duration which is a multiple of the duration time of the frames, the light being on for at least one frame duration and being off for the remainder of the cycle. An image processing unit is connected to the camera for receiving signals from the camera and subtracting one of the adjacent frames from the other to detect whether the light appears in one frame, both frames or neither frame. If the target light appears in both frames or neither frame, the image processing unit feeds a signal to a timing circuit to advance the video camera one frame. This process is continued until the target light appears in one frame and not in the other, at which time the process of advancing the video camera is stopped.

Howard, Richard T.↗