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DOE OSTI2021

Cylinder Occupancy and Measurement Suite

This software automatically records data from the Unattended Cylinder Verification Station, determines the state of the instrument, captures images of uranium hexafluoride shipment cylinders, and determines their weight. The code has been developed primarily for the International Atomic Energy Agency, but this type of instrument could be of interest to any facility operator in the uranium supply chain that handles uranium hexafluoride shipment cylinders (e.g. the 30B and 48Y cylinder). Operators may be interested in having this instrument confirm shipper declared measurement values upon receipt of a cylinder. They may also use it to aid in process monitoring if the quantity of material in the cylinder changes due to a processing activity.

Stewart, Scott L↗

NASA NTRS2006

Very High-Speed Digital Video Capability for In-Flight Use

digital video camera system has been qualified for use in flight on the NASA supersonic F-15B Research Testbed aircraft. This system is capable of very-high-speed color digital imaging at flight speeds up to Mach 2. The components of this system have been ruggedized and shock-mounted in the aircraft to survive the severe pressure, temperature, and vibration of the flight environment. The system includes two synchronized camera subsystems installed in fuselage-mounted camera pods (see Figure 1). Each camera subsystem comprises a camera controller/recorder unit and a camera head. The two camera subsystems are synchronized by use of an MHub(TradeMark) synchronization unit. Each camera subsystem is capable of recording at a rate up to 10,000 pictures per second (pps). A state-of-the-art complementary metal oxide/semiconductor (CMOS) sensor in the camera head has a maximum resolution of 1,280 1,024 pixels at 1,000 pps. Exposure times of the electronic shutter of the camera range from 1/200,000 of a second to full open. The recorded images are captured in a dynamic random-access memory (DRAM) and can be downloaded directly to a personal computer or saved on a compact flash memory card. In addition to the high-rate recording of images, the system can display images in real time at 30 pps. Inter Range Instrumentation Group (IRIG) time code can be inserted into the individual camera controllers or into the M-Hub unit. The video data could also be used to obtain quantitative, three-dimensional trajectory information. The first use of this system was in support of the Space Shuttle Return to Flight effort. Data were needed to help in understanding how thermally insulating foam is shed from a space shuttle external fuel tank during launch. The cameras captured images of simulated external tank debris ejected from a fixture mounted under the centerline of the F-15B aircraft. Digital video was obtained at subsonic and supersonic flight conditions, including speeds up to Mach 2 and altitudes up to 50,000 ft (15.24 km). The digital video was used to determine the structural survivability of the debris in a real flight environment and quantify the aerodynamic trajectories of the debris.

Corda, Stephen↗

NASA NTRS2002

Recursive Hierarchical Image Segmentation by Region Growing and Constrained Spectral Clustering

This paper describes an algorithm for hierarchical image segmentation (referred to as HSEG) and its recursive formulation (referred to as RHSEG). The HSEG algorithm is a hybrid of region growing and constrained spectral clustering that produces a hierarchical set of image segmentations based on detected convergence points. In the main, HSEG employs the hierarchical stepwise optimization (HS WO) approach to region growing, which seeks to produce segmentations that are more optimized than those produced by more classic approaches to region growing. In addition, HSEG optionally interjects between HSWO region growing iterations merges between spatially non-adjacent regions (i.e., spectrally based merging or clustering) constrained by a threshold derived from the previous HSWO region growing iteration. While the addition of constrained spectral clustering improves the segmentation results, especially for larger images, it also significantly increases HSEG's computational requirements. To counteract this, a computationally efficient recursive, divide-and-conquer, implementation of HSEG (RHSEG) has been devised and is described herein. Included in this description is special code that is required to avoid processing artifacts caused by RHSEG s recursive subdivision of the image data. Implementations for single processor and for multiple processor computer systems are described. Results with Landsat TM data are included comparing HSEG with classic region growing. Finally, an application to image information mining and knowledge discovery is discussed.

Tilton, James C.↗

DOE OSTI2022

An automated fast neutron computed tomography instrument with on-line focusing for non-destructive evaluation

A fast neutron tomography imaging instrument has been designed, built, and tested at The Ohio State University 500 kW Research Reactor on a fast neutron beamline with a peak neutron flux ≈5.4 × 107 n·cm−2·s−1 at 1.6 MeV median neutron energy. The instrument and beamline are also configurable for thermal neutron imaging. The imaging apparatus is composed of a lens coupled, water-cooled Electron Multiplying Charge Coupled Device camera, a front-surface mirror, and a high light yield plastic Polyvinyl toluene scintillator. The instrument sits on a mobile cart. A total of 5 motion-control stages are built into the system for XYZ and rotational degrees of freedom for sample positioning; the fifth stage fine tunes the focal distance between the camera and the scintillator to achieve on-line focusing. A Python code with a user-friendly graphical user interface controls the fully automated image acquisition, not requiring user interaction, yet facilitating tracking of the image acquisition. A complete fast neutron computed tomography dataset with 360 projections requires less than 3 h, with 30 s per projection. On-line focusing is accomplished with a commercial, off-the-shelf, dielectrically actuated liquid lens. Finally, tomographic reconstructions are visualized using the Livermore Tomography Tools software package. The effective pixel size (width and height) is ≈0.1058 mm, yielding a minimum voxel size of 0.1058 × 0.1058 × 0.1058 mm3, and produces a spatial resolution of 231 μm when calculated from knife-edge measurements.

Bisbee, M. G. (ORCID:0000000313466697)↗

NASA NTRS2019

The Event Horizon General Relativistic Magnetohydrodynamic Code Comparison Project

Recent developments in compact object astrophysics, especially the discovery of merging neutron stars by LIGO, the imaging of the black hole in M87 by the Event Horizon Telescope, and high- precision astrometry of the Galactic Center at close to the event horizon scale by the GRAVITY experiment motivate the development of numerical source models that solve the equations of general relativistic magnetohydrodynamics (GRMHD). Here we compare GRMHD solutions for the evolution of a magnetized accretion flow where turbulence is promoted by the magnetorotational instability from a set of nine GRMHD codes: Athena++, BHAC, Cosmos++, ECHO, H-AMR, iharm3D, HARM-Noble, IllinoisGRMHD, and KORAL. Agreement among the codes improves as resolution increases, as measured by a consistently applied, specially developed set of code performance metrics. We conclude that the community of GRMHD codes is mature, capable, and consistent on these test problems.

relativistic processes↗

DOE OSTI2026

High-speed quantitative X-ray multi-contrast imaging with deep learning based modulated pattern analysis

The advent of X-ray multi-contrast imaging methods, providing absorption, phase, and dark-field images, holds tremendous promise for complementary and non-destructive visualization of inner structures within materials and bio-samples. However, the low efficiency in measuring and analyzing X-ray modulated patterns has hindered their application in high-resolution in situ imaging. In this work, the Enhanced Scanning Pattern-based Imaging Neural Network (ESPINNet) is introduced as a powerful tool for achieving high-speed, high-resolution quantitative imaging. ESPINNet is faster than correlation-based speckle tracking methods such as XSVT and UMPA, and provides a balanced performance in terms of resolution and speed for data collection by using fewer scanning images. In comparison with our previously developed neural network, ESPINNet introduces the capability to generate dark-field images, further enhancing its versatility. By leveraging scanning patterns, ESPINNet significantly improves resolution and measurement precision. Furthermore, its adaptability to various modulation patterns, including those produced by sandpaper, coded masks, or gratings, ensures broad applicability. These features enable real-time 2D and 3D multi-contrast imaging, positioning ESPINNet as a transformative solution for applications in materials science and biomedical research, particularly for high-speed and in situ measurements.

X-ray at-wavelength metrology↗

DOE OSTI2021

Using Verified Lifting to Optimize Legacy Stencil Codes (Final Project Report)

This project investigated new techniques for compiling stencil and stencil-like computations. Stencils computations are commonly found in applications such as image processing, physical simulations, image processing, and machine learning. In recent years, many high-performance domain-specific languages (DSLs) have been proposed to optimize stencil computations. To leverage such DSLs, however, existing codes often need to be rewritten. Such rewriting is manual, labor intensive, and error-prone. To alleviate such issues, this project investigated the application of program synthesis and artificial learning techniques to enable stencil computations to automatically leverage new high-performance DSLs. Rather than constructing syntax driven rules, verified lifting uses program synthesis to search for a target code fragment to compile the given input code into. In addition, it also searches for a proof that validates how the found target code fragment preserves the semantics of the original input. Thus, the target code fragment is guaranteed to be semantically equivalent to the input.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2025

Design-to-Deployment Continuum Platform for Microscopes and Computing Ecosystems

Science ecosystems with networked computing systems and physical instruments are increasingly being deployed with a goal to achieve the productivity promised by AI-supported remote automation. In support of these efforts, the virtual infrastructure twins (VITs) have been successfully utilized to develop the orchestration codes for these ecosystems without requiring physical access to expensive instruments, such as electron microscopes. Currently, the utility of such a VIT is severely limited by the computing capacity and capability of the computing system used as its host. Furthermore, codes developed on the VIT typically need to be transferred and refactored for production use, particularly, on high-performance systems with accelerators. In response, we develop a design-to-deployment continuum platform wherein a VIT runs natively on the ecosystem's own computing system, and thereby facilitates the continual in-situ testing and transition of codes for production use. Here, we describe the development and testing of software for remote microscope steering and GPU-based image reconstruction using this platform on a multi-GPU computing system networked to Nion microscopes. We demonstrate a continual transition of steering and reconstruction codes developed under VIT platform to production ecosystem deployment.

Al-Najjar, Anees [Oak Ridge National Laboratory (O↗

NASA NTRS2021

The CHIMAERA System for Retrievals of Cloud Top, Optical and Microphysical Properties from Imaging Sensors

Continuity and consistency of geophysical retrieval products obtained from different Earth-observing spaceborne or airborne atmospheric multispectral imagers can be challenging due to inherent differences in the instruments and/or the use of different retrieval algorithms. The Cross-platform HIgh resolution Multi-instrument AtmosphEric Retrieval Algorithms (CHIMAERA) system addresses the latter aspect of the inter-sensor continuity problem for cloud property retrievals by removing retrieval methodology and implementation as a source of inconsistency when applied to instruments that share common measurement capabilities. Transferring an existing retrieval algorithm to a new sensor oftentimes is a nontrivial task, as it is common for an algorithm code to be tightly coupled to the sensor for which it was developed. By creating a clear division between the science algorithm and the instrument I/O codes, CHIMAERA allows easy migration of science algorithms to different sensors. CHIMAERA is built from C and FORTRAN source code, and can operate in a variety of environments ranging from a personal laptop to a high-performance computing environment for near real-time satellite data production. It is highly adaptable, low-maintenance and allows for easy expansion such that adding new instruments into the system requires only instrument-specific I/O and provision of any external lookup tables specific to the instrument's spectral characteristics. CHIMAERA currently supports 14 spaceborne and airborne atmospheric imagers from a single code base, and has been in use since 2007. In this paper we describe the engineering aspects of CHIMAERA and briefly discuss a few examples from its many current applications.

Galina (Gala) Wind↗

DOE OSTI2025

Swap Path Network for Robust Person Search Pre-training

This code corresponds to the WACV25 conference paper, "Swap Path Network for Robust Person Search Pre-training". In that paper, we introduce a new model for the person search task called the Swap Path Net (SPNet). The person search task is a problem in computer vision, where we locate and rank matches to an image of a query person in a set of other images where we want to find them. We also introduce a novel pre-training algorithm specific to the Swap Path Net architecture. The code implements pre-training and fine-tuning of the Swap Path Net (SPNet). This includes ingesting image datasets and updating the weights of the SPNet neural network to train it for the person search task. The repository contains code, configs, and instructions to reproduce all results from the paper.

Jaffe, LucasW [Lawrence Livermore National Laborat↗

NASA NTRS2010

Context Modeler for Wavelet Compression of Spectral Hyperspectral Images

A context-modeling sub-algorithm has been developed as part of an algorithm that effects three-dimensional (3D) wavelet-based compression of hyperspectral image data. The context-modeling subalgorithm, hereafter denoted the context modeler, provides estimates of probability distributions of wavelet-transformed data being encoded. These estimates are utilized by an entropy coding subalgorithm that is another major component of the compression algorithm. The estimates make it possible to compress the image data more effectively than would otherwise be possible. The following background discussion is prerequisite to a meaningful summary of the context modeler. This discussion is presented relative to ICER-3D, which is the name attached to a particular compression algorithm and the software that implements it. The ICER-3D software is summarized briefly in the preceding article, ICER-3D Hyperspectral Image Compression Software (NPO-43238). Some aspects of this algorithm were previously described, in a slightly more general context than the ICER-3D software, in "Improving 3D Wavelet-Based Compression of Hyperspectral Images" (NPO-41381), NASA Tech Briefs, Vol. 33, No. 3 (March 2009), page 7a. In turn, ICER-3D is a product of generalization of ICER, another previously reported algorithm and computer program that can perform both lossless and lossy wavelet-based compression and decompression of gray-scale-image data. In ICER-3D, hyperspectral image data are decomposed using a 3D discrete wavelet transform (DWT). Following wavelet decomposition, mean values are subtracted from spatial planes of spatially low-pass subbands prior to encoding. The resulting data are converted to sign-magnitude form and compressed. In ICER-3D, compression is progressive, in that compressed information is ordered so that as more of the compressed data stream is received, successive reconstructions of the hyperspectral image data are of successively higher overall fidelity.

Kiely, Aaron↗

NASA NTRS2017

Image Navigation and Registration Performance Assessment Evaluation Tools for GOES-R ABI and GLM

The GOES-R Flight Project has developed an Image Navigation and Registration (INR) Performance Assessment Tool Set (IPATS) for measuring Advanced Baseline Imager (ABI) and Geostationary Lightning Mapper (GLM) INR performance metrics in the post-launch period for performance evaluation and long term monitoring. IPATS utilizes a modular algorithmic design to allow user selection of data processing sequences optimized for generation of each INR metric. This novel modular approach minimizes duplication of common processing elements, thereby maximizing code efficiency and speed. Fast processing is essential given the large number of sub-image registrations required to generate INR metrics for the many images produced over a 24 hour evaluation period. This paper describes the software design and implementation of IPATS and provides preliminary test results.

Image registration↗

NASA NTRS2017

Image Navigation and Registration Performance Assessment Evaluation Tools for GOES-R ABI and GLM

image registration↗

NASA NTRS1988

Ray tracing optical analysis of offset solar collector for space station solar dynamic system

OFFSET, a detailed ray tracing computer code, was developed at NASA Lewis Research Center to model the offset solar collector for the Space Station solar dynamic electric power system. This model traces rays from 50 points on the face of the Sun to 10 points on each of the 456 collector facets. The triangular facets are modeled with spherical, parabolic, or toroidal reflective surface contour and surface slope errors. The rays are then traced through the receiver aperture to the walls of the receiver. Images of the collector and of the Sun within the receiver produced by this code provide insight into the collector receiver interface. Flux distribution on the receiver walls, plotted by this code, is improved by a combination of changes to aperture location and receiver tilt angle. Power loss by spillage at the receiver aperture is computed and is considerably reduced by using toroidal facets.

Jefferies, Kent S.↗

NASA NTRS1988

Ray tracing optical analysis of offset solar collector for Space Station solar dynamic system

OFFSET, a detailed ray tracing computer code, was developed at NASA Lewis Research Center to model the offset solar collector for the Space Station solar dynamic electric power system. This model traces rays from 50 points on the face of the sun to 10 points on each of the 456 collector facets. The triangular facets are modeled with spherical, parabolic, or toroidal reflective surface contour and surface slope errors. The rays are then traced through the receiver aperture to the walls of the receiver. Images of the collector and of the sun within the receiver produced by this code provide insight into the collector receiver interface. Flux distribution on the receiver walls, plotted by this code, is improved by a combination of changes to aperture location and receiver tilt angle. Power loss by spillage at the receiver aperture is computed and is considerably reduced by using toroidal facets.

Jefferies, Kent S.↗

NASA NTRS1993

Compensation for the Atmosphere in Radiance Measured by the Airborne Visible/Infrared Imaging Spectrometer and Applications to an Advanced Land Remote Sensing System

The Airborne Visible/Infrared Imaging Spectrometer measures spatial images of the total upwelling spectral radiance from 400 to 2500 nm through 10 nm spectral channels. Quantitative research and application objectives for surface investigations require conversion of the measured radiance to surface reflectance or surface leaving radiance. To calculate apparent surface reflectance an estimation of atmospheric water vapor abundance, cirrus cloud effects, surface pressure elevation and aerosol optical depth is also required. Algorithms for the estimation of these parameters from the AVIRIS data themselves are described. Based upon these determined atmospheric parameters we show an example of the calculation of apparent surface reflectance from the AVIRIS-measured radiance using a radiative transfer code.

Airborne Visible/Infrared Imaging Spectrometer AVI↗

DOE OSTI2026

PlantCV v4: Image analysis software for high‐throughput plant phenotyping

PlantCV is an open-source Python project aimed at developing tools to address a range of image-based, plant phenotyping questions. PlantCV has been used for more than 10 years to automate trait collection from image data, and the newest release, PlantCV version 4, continues to lower the barrier to entry for users without substantial coding experience through extensive example use-case tutorials and simplified installation. In addition to usability, we document added functionality since the release of PlantCV v2, including support for more image types such as fluorescence, thermal, and hyperspectral data. Finally, we describe the development of a new subpackage focused on morphological trait measurements like leaf angle, and demonstrate its utility as compared to more manual methods of data collection.

Schuhl, Haley [Donald Danforth Plant Science Cente↗

DOE OSTI2022

Implications of the correlation between bulge-to-total baryonic mass ratio and the number of satellites for SAGA galaxies

We searched for correlations between the number of satellites and fundamental galactic properties for the Milky Way-like host galaxies in order to better understand their diverse satellite populations. We specifically aim to understand why galaxies that are very similar in stellar mass content, star formation rate, and local environment have very different numbers of satellites. Deep and extensive spectroscopic observations are needed to characterize the complete satellite luminosity function beyond the Local Group. One such endeavor is an ongoing Satellites of Galactic Analogs (SAGA) spectroscopic survey that has completed spectroscopic observations of 36 Milky Way-like galaxies within their virial radii down to the luminosity of Leo I dwarf galaxy. We correlated the number of satellites of SAGA galaxies with several fundamental properties of their hosts – including total specific angular momentum, which is considered to be well preserved throughout galaxy lifetime – in an attempt to identify the main driver of their diverse satellite populations. We aim to reveal some intrinsic galactic property decisive in making more or less satellites irrespective of baryonic mass or the environment in which galaxies reside. We modeled Spitzer Heritage Archive images of SAGA host galaxies at 3.6 and 4.5 microns with GALFIT code to obtain their stellar masses. We also searched the Extragalactic Database for information on their gas content and rotation velocities. Empirical correlations, like the baryonic Tully–Fisher relation and the stellar mass–size relation were used to exclude outliers. All the available galactic properties from the literature along with measured stellar masses were correlated with the number of satellites and no significant correlation was found. However, when we considered the “expected” number of satellites based on the correlation between the baryonic bulge-to-total ratio and the number of satellites confirmed for several nearby galaxies then strong correlations emerge between this number and (1) the mass of the bulge, and (2) the total specific angular momentum. The first correlation is positive, implying that galaxies with more massive bulges have more satellites, as already confirmed. Furthermore, the second correlation with the angular momentum is negative, meaning that, the smaller the angular momentum, the greater the number of expected satellites. This would imply that either satellites cannot form if galaxy angular momentum is too high, or that satellites form inside-out, so that angular momentum is being transferred to the outer parts of the galaxies. However, deeper spectroscopic observations are needed to confirm these findings, because they rely on the expected rather than detected number of satellites. There was a luminosity limit to the SAGA survey equivalent to the luminosity of Leo I dwarf satellite of the Milky Way galaxy (the SAGA limit). In particular, correlations found in this work are very susceptible to the total number of satellites of the NGC 4158 galaxy. This galaxy is predicted to have many more satellites than detected up to the SAGA limit.

79 ASTRONOMY AND ASTROPHYSICS↗