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At least 559 records · Page 31

All sources NASA NTRS DOE OSTI

NASA NTRSDate not supplied

Open Science for Life in Space: Data Sharing and Tools for Knowledge Discovery

Molecular-omics, physiological-phenotypic-behavioral, and environmental-radiation telemetry data from spaceflight biological and health studies are increasingly being made findable, accessible, interoperable, and reusable for the scientific public. These data, as well as space science-relevant biospecimens, are available through NASA’s Open Science Data Repository (OSDR), which is the new umbrella grouping of NASA GeneLab, the Ames Life Sciences Data Archive (ALSDA), and the NASA Biological Institutional Scientific Collection (NBISC). The quality of data is underpinned by datasets having rich metadata (determined through Analysis Working Group members), processing pipelines to enable data reuse standards, and ontologies specifying terminology semantics (e.g., the Radiation Biology Ontology).

space biology↗

NASA NTRSDate not supplied

QuARC: Development of a Service to Enable FAIR-er Metadata

The ARC Project: The ARC Team located at NASA’s Marshall Space Flight Center conducts quality assessments of metadata records that catalog NASA’s collection of over 9,000 Earth observation data products, stored in a centralized database called the Common Metadata Repository (CMR). The ARC Team has developed a metadata quality assessment framework to evaluate metadata completeness, correctness, and consistency with the goal of making NASA’s data products more discoverable, accessible, and usable. ARC = Analysis and Review of the CMR

Earth Science Informatics↗

NASA NTRSDate not supplied

Ramdb: The NASA Raman Spectral Database (version 1.00).

Given that, in most instances, minimal sample preparation is required and due to its contactless instrument design, Raman spectroscopy is one of the most versatile vibrational spectroscopic techniques for the chemical analysis of environmental and biological specimens. The diversity of applications of Raman spectroscopy ranges anywhere from art [1] to planetary science missions [2]. The advancement in the use of Raman spectroscopy in Solar System missions, notably in post-mission sample return analysis, requires a spectral library holding the broad range of specimens that could be found in Solar System sources. For this purpose, we have initiated the development of a Raman spectral database (Ramdb) at NASA Ames Research Center. Currently, the database includes experimental and theoretical Raman spectra of PAHs [3, 4], as well as laboratory Raman spectra of amino acids, carbon allotropes, minerals, and analogs relevance to Earth Sciences [5], Exobiology [6], Planetary [7], and Astrochemistry [8] to name just a few examples. Ramdb can be found on the web at www.astrochemistry.org/ramdb, where raw and processed Raman spectra can be downloaded in CSV format. The laboratory Raman spectra are measured using a laser Raman spectrometer (JASCO NRS-5500-532QRI). The Raman instrument is equipped with three excitation lasers, with wavelengths of 405, 532, and 785 nm. A clean silicon substrate is used as the internal standard for wavenumber calibration. Powdered samples were prepared (microscopic >10 um, grounded microscopic < 10 um) on glass slides. Some raw data exhibited a background signal arising as a combination of laser-induced fluorescence from the sample. To correct this background, we developed a Python pipeline that uses open-source Python libraries. Ramdb provides both raw and processed (using Python pipeline) data, which includes tabulated Raman shift transitions and other measurement details. The theoretical Raman band positions of PAHs (pyrene monomers and tetramer clusters) were computed using density functional theory (DFT) with the help of the Gaussian 16 suite of programs [9]. In the near future, Ramdb will serve as a repository of Raman spectral data from Laboratory Astrophysics and Planetary Science experiments involving the irradiation of organic compounds under simulated space and planetary conditions. In addition, online and offline tools will be developed for utilising the database for comparison to the user’s sample.

N Punnakayathil↗

NASA NTRSDate not supplied

MIKA: Manager for Intelligent Knowledge Access Toolkit for Engineering Knowledge Discovery and Information Retrieval

Repositories of safety reports are often underutilized and only analyzed manually by trained experts, despite safety management systems requiring reports. These collections of documents contain a wealth of information from past projects and operations that could improve system safety and design. Advances in natural language processing techniques have improved information extraction and retrieval in consumer technology, biomedicine, and finance, for instance, but have not been applied to engineering documents on the same scale. To this end, the Manager for Intelligent Knowledge Access (MIKA) open-source toolkit has been developed for rapid knowledge discovery and information retrieval in safety engineering applications. The MIKA toolkit uses state-of-the-art natural language processing algorithms and allows a user to apply these methods to their own dataset. This paper describes the MIKA toolkit and its two primary capabilities, knowledge discovery and information retrieval, and demonstrates the toolkit via a case study on National Transportation Safety Board (NTSB) reports.

Machine Learning↗

NASA NTRSDate not supplied

An Overview of NASA’s Catalog of Archived Suborbital Earth Science Investigations (CASEI): Supporting FAIR and Open Access to Airborne and Field Data

Since 2019, NASA’s Airborne Data Management Group (ADMG) within the Interagency Implementation and Advanced Concepts Team (IMPACT) has worked to promote and ensure the discoverability and accessibility of the agency’s non-satellite Earth science observations. A primary component of this effort is the development of NASA’s Catalog of Archived Suborbital Earth Science Investigations (CASEI) and the vetting of key contextual details required to sustain this unique inventory of airborne and field metadata. CASEI provides information on the science objectives motivating data collection, key events/time periods in the observational record aligned with the science objectives, complementary simultaneous observations, programmatic details, and much more. The diverse set of data formats and disciplines served by CASEI have required the implementation of a common data model to organize suborbital observation metadata and efficiently connect appropriate campaigns, platforms, and instruments. The CASEI inventory provides a single entry point for users to search and browse NASA’s airborne and field data archives, regardless of which repository is responsible for their stewardship. This presentation will provide a summary of the motivations for and the development of the CASEI system. Particular attention will be granted to how CASEI facilitates discovery and reuse of these lesser-known NASA data, supporting the Open Science vision and enhancing the return on investments made to collect these unique and varied observations. An up-to-date summary of CASEI inventory content and initial metrics will be provided. Current and future avenues ADMG is pursuing to enhance both CASEI and specific components of suborbital data stewardship at various stages of the data life cycle will also be discussed.

Stephanie M. Wingo↗

NASA NTRSDate not supplied

Enabling Space Biological Knowledge Discovery Through Image and Video Data Sharing

Increased biomedical risks associated with deep space crewed missions (cis-Lunar, Mars transit/surface) require development of health countermeasures, novel ecosystem support, risk modeling, and fundamental space biological knowledge discovery. Molecular-omics, physiological-phenotypic-behavioral, and environmental-radiation telemetry data from space biological and health studies are needed for reuse by scientists to address these tasks. The data as well as space-relevant biospecimens are being made more findable, accessible, interoperable, and reusable through NASA’s Open Science Data Repository (OSDR). This new OSDR umbrella grouping includes NASA GeneLab, the NASA Ames Life Sciences Data Archive (ALSDA), and the NASA Biological Institutional Scientific Collection. The OSDR system design appropriately handles metadata and processed-tabular results from ALSDA studies collected from space experiments. But raw and processed ALSDA bioimage and video datasets require an expansion of OSDR’s data architecture to handle ingestion, curation, and egress. The academic-industry bioimaging field saw a scientific renaissance in the past several years through leveraging open-source software, international collaborations, machine learning, and other open science/programming approaches. As crewed missions and more biological experiments are on the deep space horizon, OSDR is embracing data stewardship through listening to feedback from subject matter experts and designing an expanded architecture which is appropriate for NASA’s goals to enable analysis and reuse of bioimaging and video data for the public science community.Discovery Through Image and Video Data Sharing

space biology↗

NASA NTRSDate not supplied

Laying the Foundations for FAIR-er Science: ISA and the LSDA Data Submission Process in NASA's Evolving Data Management Environment

The Life Sciences Data Archive (LSDA) archives data resulting from research on the effects of spaceflight on humans and the development of countermeasures to mitigate spaceflight hazards. Archivists work with researchers to ensure that unique and high value data products and their metadata are preserved and managed to support current and future research. Currently, LSDA is updating its procedures and data submission requirements in response to the evolving data preservation environment at NASA. LSDA is implementing best practices for research data management through the establishment of clear data submission guidelines, integration of the FAIR (Findability, Accessibility, Interoperability, Reusability) principles, and use of the ISA (Investigation, Study, Assay) research metadata framework for data discoverability and transparency into the data management processes. These changes directly impact LSDA’s requirements for research data submissions. The newly revised Research Data Submission Agreement (RDSA), formerly the Data Submission Agreement (DSA), introduces ISA-compatible metadata collection standards to LSDA’s process. Adherence to LSDA’s data submission guidelines enhances the FAIR-ness of the repository’s collections for future users. This presentation will discuss (1) how submission of research data and associated metadata are impacted by current data management policies, (2) benefits of the adoption of FAIR principles and the ISA metadata framework for retrospective studies utilizing existing LSDA datasets and historic data collections, and (3) the support LSDA will provide to researchers during this transition.

LSDA↗

NASA NTRSDate not supplied

The Anatomy of Software Changes and Bugs in Autonomous Operating System

Cyberphysical systems with autonomous functions are complex pieces of software, consisting of many components, some of which implement autonomous functionality and some may use AI or machine learning algorithms. Software bugs in an autonomous system are of particular concern, as they can have catastrophic consequences. However, detailed studies based on empirical data are rare and therefore these bugs are not well understood. This paper aims to contribute towards filling that gap by investigating the software changes and bugs in Autonomy Operating System (AOS) for Unmanned Aircraft Systems (UAS), which consist of 26 components containing about 103,000 lines of code and having a total of 772 bugfixes. Based on the data extracted from the code repository and semi-structured interviews with the developers of AOS, we explore the differences among autonomous software components, components developed using Model-based Software Engineering, and reuse with respect to change proneness, fault proneness, distribution of bugfixes among AOS components and files of these components, and characteristics of bugs of different AOS components. Our results show that the autonomous components were significantly more change prone (measured in number of commits and code churn) and fault prone (measured in bugfixes per KLoC) than non-autonomous components. The distribution of the locations of bugfixes was skewed, both at component and file level (i.e., a small number of components / files contained the majority of bugs). These evidence-based findings provide important insights to researchers and practitioners alike and can be used to efficiently improve the quality and reliability of autonomous systems.

Katerina Goseva-Popstojanova↗

NASA NTRS1950

Preliminary Investigation of Fretting

An experimental investigation, using microscopic observation and color motion photomicrographs of the action, was conducted to determine the cause of fretting. Glass and other noncorrosive materials, as well as metals, were used as specimens. A very simple apparatus vibrated convex surfaces in contact with stationary flat surfaces at frequencies of 120 cycles or less than one cycle per second, an amplitude of 0.001 inch, and a load of 0.2 pound. The observations and analysis led to the conclusions that fretting was initiated by the loosening, due to the inherent adhesive forces, of finely divided and apparently virgin material, and that its initiation is independent of vibratory motion or high sliding speeds. The fretting of platinum, glass, quartz, ruby, and mica relegated the role of oxidation as a cause to that of a secondary factor. Fretting occurred to clean nonmetals and metals readily, and glass microscope slides and steel balls provide excellent method for visual studies. Video run time 9:54, color and sound (mp4). Available for download for best viewing. Document indicated in video is related in the repository and can also be downloaded for use at https://ntrs.nasa.gov/citations/19930083206.

fretting↗

NASA NTRSDate not supplied

The Emphasis of Design Patterns in Expressing Expert Knowledge From A Technical Solution – A Framework for Continued Research

Digital Engineering is a transformative strategy that leverages an integrated model-based approach to improve communication, decision making, design understanding, and acquisition efficiency of system development. As modern systems are derived from pre-existing systems, harvesting expert knowledge from proven systems in a useful, model-based way will reduce the experiential learning and cognition required for new system development, contributing to a Digital Engineering transformation. Motivated by performance gains observed during a multi-year, sequential development activity, this survey reviews knowledge, architecture, and pattern literature to establish a framework for research of architectural methods for expert knowledge identification and description using Model Based System Engineering. The multi-year sequential development activity is offered as the experimental system of interest for this research. This work aims to enable a digital engineering strategy that improves concept phase decision making, accelerates knowledge acquisition from lessons learned repositories, and eases the burden of generational knowledge loss.

Lithium Ion↗

NASA NTRSDate not supplied

WET Water Resources: A Google Earth Engine Python API Tool to Automate Wetland Extent Mapping Using Radar Satellite Sensors for Wetland Management and Monitoring

Wetland ecosystems are annually or seasonally wet transition zones between land and water. They provide a range of ecosystem services such as water filtration, flood mitigation, and carbon sequestration, as well as hosting biodiversity hotspots. Although they fulfill fundamental physical and natural processes, wetland extent and health are threatened by anthropogenic influences related to urbanization, population increase, pollution, and climate change. Recognizing the need to quantitatively monitor changes in these recently threatened ecosystems in a timely and cost-effective way, we developed a Google Earth Engine (GEE) Python API tool for automated wetland extent mapping using optical and radar satellite sensors that can be applied globally. The tool will significantly improve wetland change analysis and monitoring as the optical and SAR data proves high resolution (5-10 m) imagery, and SAR data is unaffected by cloud cover and light availability (day vs. night), which are common limitations for other remotely sensed sensors. The tool utilizes Copernicus Sentinel-1 C-band and NISAR L-band synthetic aperture radar (SAR) imagery. During image preprocessing, we applied a MODIS snow mask product to mask global snow coverage, which would affect land classification sensitivity. Calibration and validation were conducted through a historical change and sensitivity analysis of the Sudd watershed located in central Sudan. The tool was the first of its kind, as it enables NISAR data processing through an open-source GEE repository, further expanding and improving the utility of NASA Earth observations and contributing to NASA Open Science initiatives. We anticipate the tool will be used by researchers and practitioners interested in wetland monitoring and management..

Lori Berberian↗

NASA NTRSDate not supplied

The Complex Refractive Indices of Mineral Aerosols and Why They Matter

Aerosol refractive indices are fundamental parameters that are generally measured by spec-troscopists with specialized knowledge. We in the Earth science community frequently utilizethese refractive indices because they are essential for computing aerosol radiative effects andretrieving aerosol composition. Unfortunately, there are a wide variety of refractive indiceswith significant differences for some aerosol species (e.g., hematite) and a lack of refractiveindex choices for other aerosols (e.g., clay minerals, goethite), and this hinders our ability toaccurately compute the radiative effect of mineral dust. Additionally, the mineral refractiveindices used in atmospheric science are not necessarily linked to the mineral reflectancesused to identify surface mineralogy; this creates a disconnect between the atmosphere andthe surface that frustrates closure analyses.In this talk, we will present an overview of some refractive indices of radiative importancein aeolian dust (illite, kaolinite, montmorillonite, hematite, goethite). We will discuss howmineral refractive indices are used in aerosol retrievals, and how we can use remote sensingretrievals to narrow the range of viable choices. We will also discuss how we can use pub-lished spectroscopic measurements to extrapolate the refractive indices that are inferred ata handful of visible and near-infrared wavelengths to the longwave regime. Finally, we willdiscuss how working groups like MIRA (Models, In situ, and Remote sensing of Aerosols;https://science.larc.nasa.gov/mira-wg/) and community repositories like TAO (Tables ofAerosol Optics) can improve radiative closure by enhancing interactions between the threedisciplines.1

aerosols↗

NASA NTRSDate not supplied

MIKA: Manager for Intelligent Knowledge Access Toolkit for Engineering Knowledge Discovery and Information Retrieval

Systems Engineering↗

NASA NTRSDate not supplied

Extracting Lessons of Resilience Using Machine Mining of the ASRS Database

NASA’s Aviation Safety Reporting System (ASRS) database is the world's largest repository of voluntary, confidential safety information provided by aviation's frontline personnel, including pilots, air traffic controllers, mechanics, flight attendants, dispatchers, and other members of the aviation community and the public. The database contains close to 2 million narratives, many of which describe everyday situations in which people saved the day. In these situations, people’s resilient behavior solved a problem, dealt with a malfunction, and maintained a safe operation despite a serious perturbation. To be able to extract lessons of such resilience from this large database, the use of machine learning algorithms is being explored. In this report, we describe a comparison between two such algorithms: Perilog and Word2Vec. An identical search using both programs was done on a database containing approximately 470,000 ASRS reports submitted between 1988 and 2022. The comparison reveals some of the strength and weaknesses of each algorithm as well as the challenges inherent in using such algorithms to extract lessons of resilience from the ASRS database.

resilience↗

NASA NTRSDate not supplied

Preserving NASA Historic and Current Mission Data and Adding Value to These for Future Researchers

The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) has been actively involved in many aspects of ensuring the long-term preservation of NASA earth science data and knowledge. This involves both the recovery and preservation of early NASA meteorological and other earth observation data, as well as preserving the more recent Earth Observation System (EOS) mission data sets which continue or have reached their end of lifetime. The GES DISC adds value to these preserved data by adding metadata and making the data available online to future researchers. The early NASA meteorological and earth observation data sets from the 1960s and 70s were originally archived on magnetic tapes, and visualizations of these data were preserved on 70-mm film. As these media have aged, their contents have been at risk of permanent loss. NASA has given the task of preserving these early data sets to the GES DISC and making these data sets easily available to the public. The data from these early missions are potentially useful to climate researchers as these are some of the only global measurements made at their time. These old data on magnetic tapes and film strips do not contain easily readable metadata, and so to add value the GES DISC has added digital metadata to them so that the data are searchable and findable. The GES DISC is also involved in preserving the data and knowledge from the EOS era missions. The GES DISC follows the guidelines developed for the preservation of data as specified in the NASA EOS Data and Information System (EOSDIS) Earth Science Data Preservation Content Specification (423-SPEC-001) document. To date, the GES DISC has consulted with the data science teams from the following missions: UARS, Earth Probe TOMS, Aura HIRDLS, and SORCE, in order to properly preserve their data and accompanying documentation. The GES DISC is also currently working with the EOS science teams from TRMM, AIRS, MLS, OMI and additional missions to ensure that the relevant documents and data sets are properly archived for future researchers. A standardized procedure for mission data preservation following 423-SPEC-001 makes preservation among the many NASA EOSDIS data centers uniform, so that these could be transitioned easily to a common EOSDIS preservation repository. This presentation will give an overview of the preservation and recovery of the old NASA historical data sets archived at the GES DISC, as well as the data and documentation preservation efforts of the EOS era missions.

James Johnson↗

NASA NTRSDate not supplied

SafeAeroBERT: Towards a Safety-Informed Aerospace-Specific Language Model

As aviation systems continue to operate with high traffic, large amounts of documents containing safety-relevant data continue to be generated via reporting systems such as the Aviation Safety Reporting System (ASRS). Advanced natural language processing techniques, specifically pre-trained language models, have shown great success in domain-specific applications; however, the text in aviation safety reports is inundated with jargon and thus not fully utilized by general pre-trained models. In this research, we work towards developing a safety-informed aerospace-specific language model by pre-training a Bidirectional Encoder Representations from Transformer (BERT) model on reports from the Aviation Safety Reporting System and the National Transportation Safety Board. The resulting model, called SafeAeroBERT, is fine-tuned for the specific task of document classification, and can be further tuned for named-entity recognition, relation detection, information retrieval, and summarization. Results from the classification task are compared between SafeAeroBERT, the base BERT, and SciBERT models and show SafeAeroBERT outperforms the general BERT and SciBERT on classifying reports about weather and procedure. SafeAeroBERT can be used on custom tasks, not limited to document classification, and is intended to aid an intelligent knowledge manager for safety report repositories.

Aviation↗

NASA NTRS2023

Cloud - Aerosol LIDAR Infrared Pathfinder Satellite Observations (CALIPSO) - Data Management System: Data Products Catalog V4.95

The CALIPSO V4.51 Lidar Level 1 and Level 2 data product is an updated version of an already order-able dataset. The changes were signed off by the CALIPSO Configuration Control Board, versioned, and the code uploaded to a code repository. There is no ITAR/SBU data or code associated with this product. Data will be publicly order-able at the NASA LaRC Atmospheric Sciences Data Center (ASDC). All documentation and web sites will be made public once the data product is released. The data is in HDF4 format and will be generated for majority of the mission (June 2006 - August 2023). The attached Data Products Catalog (v4.95) describes the content of these new data products.

Mark Vaughan↗

NASA NTRSDate not supplied

NASA GeneLab Multi-study Visualization Portal

NASA GeneLab has helped advance the field of Space Biology by providing a public repository where researchers can store, share, analyze and visualize the results of space flight related omics experiments. The GeneLab data visualization portal allows any user, regardless of bioinformatics knowledge or access to computational resources, to interact with the experimental data, draw their own conclusions, and gain insights about the effects of space on living systems. These tools help democratize scientific research and foster the NASA Open Science initiative. The new multi-study feature of the GeneLab visualization platform allows users to mine study metadata from RNA sequencing (RNA-seq) experiments to identify samples of interest by filtering datasets based on organism, tissue, assay technology type, and/or factor. Once samples are selected from multiple datasets, users can combine and normalize the sample data, then utilize the visualization displays, including Principal Component Analysis (PCA) plots, to assess sample distributions. Finally, users can perform differential gene expression analysis on the combined data and visualize the results through PCA plots, Volcano plots, Pair plots, Heatmap, Ideogram and Gene Set Enrichment Analysis. All user-generated results and visualizations will be available for download. Here, we present a biological study using samples from multiple GeneLab RNA-seq datasets and analyzed using the multi-study visualization platform to demonstrate inter- and intra-study variability, as well as commonly differentially expressed genes between spaceflight and ground control conditions across datasets. This new feature opens a wide range of possibilities and opportunities for further development including combining other assay technology types and integration with batch effect correction techniques and machine learning applications. Overall, this tool allows users to increase the statistical power of individual experiments, validate hypothesis, identify patterns, and opens the door to new and exciting research.

space biology↗