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At least 559 records · Page 31

Full empirical potential curves for the X{sup 1}Σ{sup +} and A{sup 1}Π states of CH{sup +} from a direct-potential-fit analysis

All available “conventional” absorption/emission spectroscopic data have been combined with photodissociation data and translational spectroscopy data in a global analysis that yields analytic potential energy and Born-Oppenheimer breakdown functions for the X{sup 1}Σ{sup +} and A{sup 1}Π states of CH{sup +} and its isotopologues that reproduce all of the data (on average) within their assigned uncertainties. For the ground X{sup 1}Σ{sup +} state, this fully quantum mechanical “Direct-Potential-Fit” analysis yielded an improved empirical well depth of D{sub e} = 34 362.8(3) cm{sup −1} and equilibrium bond length of r{sub e} = 1.128 462 5 (58) Å. For the A{sup 1}Π state, the resulting well depth and equilibrium bond length are D{sub e} = 10 303.7(3) cm{sup −1} and r{sub e} = 1.235 896 (14) Å, while the electronic isotope shift from the hydride to the deuteride is ΔT{sub e} = − 5.99(±0.08) cm{sup −1}.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A noniterative asymmetric triple excitation correction for the density-fitted coupled-cluster singles and doubles method: Preliminary applications

An efficient implementation of the asymmetric triples correction for the coupled-cluster singles and doubles [ΛCCSD(T)] method [S. A. Kucharski and R. J. Bartlett, J. Chem. Phys. 108, 5243 (1998); T. D. Crawford and J. F. Stanton, Int. J. Quantum Chem. 70, 601 (1998)] with the density-fitting [DF-ΛCCSD(T)] approach is presented. The computational time for the DF-ΛCCSD(T) method is compared with that of ΛCCSD(T). Our results demonstrate that the DF-ΛCCSD(T) method provide substantially lower computational costs than ΛCCSD(T). Further application results show that the ΛCCSD(T) and DF-ΛCCSD(T) methods are very beneficial for the study of single bond breaking problems as well as noncovalent interactions and transition states. We conclude that ΛCCSD(T) and DF-ΛCCSD(T) are very promising for the study of challenging chemical systems, where the coupled-cluster singles and doubles with perturbative triples method fails.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

On the correct choice of equivalent circuit for fitting bulk impedance data of ionic/electronic conductors

Bulk conductivity data of ionically and electronically conducting solid electrolytes and electronic ceramics invariably show a frequency dependence that cannot be modelled by a single-valued resistor. To model this, common practice is to add a constant phase element (CPE) in parallel with the bulk resistance. To fit experimental data on a wide variety of materials, however, it is also essential to include the limiting, high frequency permittivity of the material in the equivalent circuit. Failure to do so can lead to incorrect values for the sample resistance and CPE parameters and to an inappropriate circuit for materials that are electrically heterogeneous.

36 MATERIALS SCIENCE↗

Analytic energy gradients for the coupled-cluster singles and doubles method with the density-fitting approximation

An efficient implementation is presented for analytic gradients of the coupled-cluster singles and doubles (CCSD) method with the density-fitting approximation, denoted DF-CCSD. Frozen core terms are also included. When applied to a set of alkanes, the DF-CCSD analytic gradients are significantly accelerated compared to conventional CCSD for larger molecules. The efficiency of our DF-CCSD algorithm arises from the acceleration of several different terms, which are designated as the “gradient terms”: computation of particle density matrices (PDMs), generalized Fock-matrix (GFM), solution of the Z-vector equation, formation of the relaxed PDMs and GFM, back-transformation of PDMs and GFM to the atomic orbital (AO) basis, and evaluation of gradients in the AO basis. For the largest member of the alkane set (C{sub 10}H{sub 22}), the computational times for the gradient terms (with the cc-pVTZ basis set) are 2582.6 (CCSD) and 310.7 (DF-CCSD) min, respectively, a speed up of more than 8-folds. For gradient related terms, the DF approach avoids the usage of four-index electron repulsion integrals. Based on our previous study [U. Bozkaya, J. Chem. Phys. 141, 124108 (2014)], our formalism completely avoids construction or storage of the 4-index two-particle density matrix (TPDM), using instead 2- and 3-index TPDMs. The DF approach introduces negligible errors for equilibrium bond lengths and harmonic vibrational frequencies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

NR sulphur vulcanization: Interaction study between TBBS and DPG by means of a combined experimental rheometer and meta-model best fitting strategy

The paper is aimed at studying the possible interaction between two different accelerators (DPG and TBBS) in the chemical kinetic of Natural Rubber (NR) vulcanized with sulphur. The same blend with several DPG and TBBS concentrations is deeply analyzed from an experimental point of view, varying the curing temperature in the range 150-180°C and obtaining rheometer curves with a step of 10°C. In order to study any possible interaction between the two accelerators –and eventually evaluating its engineering relevance-rheometer data are normalized by means of the well known Sun and Isayev normalization approach and two output parameters are assumed as meaningful to have an insight into the possible interaction, namely time at maximum torque and reversion percentage. Two different numerical meta-models, which belong to the family of the so-called response surfaces RS are compared. The first is linear against TBBS and DPG and therefore well reproduces no interaction between the accelerators, whereas the latter is a non-linear RS with bilinear term. Both RS are deduced from standard best fitting of experimental data available. It is found that, generally, there is a sort of interaction between TBBS and DPG, but that the error introduced making use of a linear model (no interaction) is generally lower than 10%, i.e. fully acceptable from an engineering standpoint.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Permutation invariant polynomial neural network approach to fitting potential energy surfaces. IV. Coupled diabatic potential energy matrices

A machine learning method is proposed for representing the elements of diabatic potential energy matrices (PEMs) with high fidelity. This is an extension of the so-called permutation invariant polynomial-neural network (PIP-NN) method for representing adiabatic potential energy surfaces. While for one-dimensional irreducible representations the diagonal elements of a diabatic PEM are invariant under exchange of identical nuclei in a molecular system, the off-diagonal elements require special symmetry consideration, particularly in the presence of a conical intersection. A multiplicative factor is introduced to take into consideration the particular symmetry properties while maintaining the PIP-NN framework. Here, we demonstrate here that the extended PIP-NN approach is accurate in representing diabatic PEMs, as evidenced by small fitting errors and by the reproduction of absorption spectra and product branching ratios in both H 2 O$(\tilde{X} / \tilde{B})$ and NH 3 $(\tilde{X} $/Ã) non-adiabatic photodissociation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Particle transport constraints via Bayesian spectral fitting of multiple atomic lines

Optimized operation of fusion devices demands detailed understanding of plasma transport, a problem that must be addressed with advances in both measurement and data analysis techniques. In this work, we adopt Bayesian inference methods to determine experimental particle transport, leveraging opportunities from high-resolution He-like ion spectra in a tokamak plasma. The Bayesian spectral fitting code is used to analyze resonance (w), forbidden (z), intercombination (x, y), and satellite (k, j) lines of He-like Ca following laser blow-off injections on Alcator C-Mod. This offers powerful transport constraints since these lines depend differently on electron temperature and density, but also differ in their relation to Li-like, He-like, and H-like ion densities, often the dominant Ca charge states over most of the C-Mod plasma radius. Using synthetic diagnostics based on the AURORA package, we demonstrate improved effectiveness of impurity transport inferences when spectroscopic data from a progressively larger number of lines are included.

47 OTHER INSTRUMENTATION↗

Extension of the flux fit method for estimating power deposition profiles

The flux fit method is used to self-consistently estimate the power deposition profile and heat transport profiles from temperature measurements originating from perturbative experiments with a modulated source. Furthermore, this letter improves on this method by addressing the limitations and assumptions. The most crucial improvement is the additional freedom in the source deposition profile. Allowing for a variable central deposition location and height and including a skewness parameter produces deposition profiles more consistent with the measurement data, but still wider than equilibrium ray tracing in two different DIII-D discharges. Moreover, we show that the quality of the estimated deposition profile is key to the accuracy of diffusivity and connectivity estimates, but inversely, the estimated transport parameters hardly affect the quality of the power deposition estimate. Using this method, we show that the power deposition profile estimate is broadened with respect to ray-tracing by about 1.7-1.8 times in two DIII-D discharges.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Implementing Faraday effect measurement constraints into the Grad–Shafranov equilibrium fitting code EFIT

A new tool for the exploration and diagnosis of the internal magnetic field of plasmas in the DIII-D tokamak in the form of a constraint on the EFIT (Equilibrium Fitting) Grad–Shafranov code based on the Faraday-effect Radial Interferometer-Polarimeter (RIP) diagnostic is presented, including description, verification, and sample application. The physics underlying the diagnostic and its implementation into EFIT are discussed, and the results showing the verification of the model are given, and the model’s limitations are discussed. The influence of the diagnostic’s input on the resulting equilibrium parameters is characterized. Furthermore, the effect of electron density profile refinement is evaluated and found to be negligible. A sample application of the diagnostic is shown, indicating that the RIP constraint has similar effects on the equilibrium as motional Stark effect constraints do.

47 OTHER INSTRUMENTATION↗

Life history variation is maintained by fitness trade-offs and negative frequency-dependent selection

Significance Many populations and species have different strategies for maximizing reproductive success in changing environments. For example, some species of plants reproduce only once in their lifetime (annuals), whereas others can reproduce over multiple years (perennials). Such variation can also occur in fishes, and we examine how this variation in life history strategies is maintained in a Pacific salmonid species ( Oncorhynchus mykiss ). We find that fish that successfully migrate between the ocean and their freshwater spawning grounds multiple times (repeat spawners) have more than twice the lifetime reproductive success of fish that only spawn once (single spawners). We also find a striking pattern of negative frequency-dependent selection in which older, larger females have higher lifetime fitness when they are less abundant.

Christie, Mark R.↗

Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry-based Assay Development Using a Fit-for-Purpose Approach

Adoption of targeted mass spectrometry (MS) approaches such as multiple reaction monitoring (MRM) to study biological and biomedical questions is well underway in the proteomics community. Successful application depends on the ability to generate reliable assays that uniquely and confidently identify target peptides in a sample. Unfortunately, there is a wide range of criteria being applied to say that an assay has been successfully developed. There is no consensus on what criteria are acceptable and little understanding of the impact of variable criteria on the quality of the results generated. Publications describing targeted MS assays for peptides frequently do not contain sufficient information for readers to establish confidence that the tests work as intended or to be able to apply the tests described in their own labs. Guidance must be developed so that targeted MS assays with established performance can be made widely distributed and applied by many labs worldwide. To begin to address the problems and their solutions, a workshop was held at the National Institutes of Health with representatives from the multiple communities developing and employing targeted MS assays. Participants discussed the analytical goals of their experiments and the experimental evidence needed to establish that the assays they develop work as intended and are achieving the required levels of performance. Using this “fit-for-purpose” approach, the group defined three tiers of assays distinguished by their performance and extent of analytical characterization. Computational and statistical tools useful for the analysis of targeted MS results were described. Participants also detailed the information that authors need to provide in their manuscripts to enable reviewers and readers to clearly understand what procedures were performed and to evaluate the reliability of the peptide or protein quantification measurements reported. This paper presents a summary of the meeting and recommendations. Molecular & Cellular Proteomics 13: 10.1074/mcp.M113.036095, 907–917, 2014.

Environmental Molecular Sciences Laboratory↗

Fit for Purpose: An Evolutionary Strategy for the Implementation and Verification of the Treaty on the Prohibition of Nuclear Weapons

The Treaty on the Prohibition of Nuclear Weapons requires States Parties to designate a “competent international authority or authorities” for negotiating and verifying the irreversible elimination of nuclear-weapons programs. Ensuring that such an authority or authorities is able to be fit for purpose when required to meet these tasks will be crucial for both the future implementation and legitimacy of the Treaty. To address this challenge, this article proposes the early creation of a two-part organizational structure, comprising an implementation support unit and a dedicated scientific and technical advisory body, to begin the process of institutionalizing the treaty, and build the technical basis for meeting its verification goals should a nuclear-weapon-possessing state decide to join. The article then discusses how such two-part structure could be scaled-up as a standing international organization tasked with the coordination of an ad hoc inspectorate, which would also cooperate and complement the work of existing nuclear verification organizations, such as the International Atomic Energy Agency. This evolutionary and adaptive strategy to institution building could empower the new Treaty by supporting the emergence of a new regime complex for nuclear disarmament, while taking into account the initially limited financial and technical resources of its member states.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗

MAGNETICALLY AND BARYONICALLY DOMINATED PHOTOSPHERIC GAMMA-RAY BURST MODEL FITS TO FERMI-LAT OBSERVATIONS

We consider gamma-ray burst models where the radiation is dominated by a photospheric region providing the MeV Band spectrum, and an external shock region responsible for the GeV radiation via inverse Compton scattering. We parameterize the initial dynamics through an acceleration law {Gamma}{proportional_to}r {sup {mu}}, with {mu} between 1/3 and 1 to represent the range between an extreme magnetically dominated and a baryonically dominated regime, depending also on the magnetic field configuration. We compare these models to several bright Fermi-LAT bursts, and show that both the time-integrated and the time-resolved spectra, where available, can be well described by these models. We discuss the parameters which result from these fits, and discuss the relative merits and shortcomings of the two models.

79 ASTRONOMY AND ASTROPHYSICS↗

Early-type galaxy archeology: Ages, abundance ratios, and effective temperatures from full-spectrum fitting

The stellar populations of galaxies hold vital clues to their formation histories. In this paper we present results based on modeling stacked spectra of early-type galaxies drawn from the Sloan Digital Sky Survey as a function of velocity dispersion, σ, from 90 km s{sup –1} to 300 km s{sup –1}. The spectra are of extremely high quality, with typical signal-to-noise ratio of 1000 Å{sup –1}, and a wavelength coverage of 4000 Å –8800 Å. Our population synthesis model includes variation in 16 elements from C to Ba, a two-component star formation history, the shift in effective temperature, Δ T {sub eff}, of the stars with respect to a solar metallicity isochrone, and the stellar initial mass function, among other parameters. In our approach we fit the full optical spectra rather than a select number of spectral indices and are able to, for the first time, measure the abundances of the elements V, Cr, Mn, Co, and Ni from the integrated light of distant galaxies. Our main results are as follows: (1) light-weighted stellar ages range from 6-12 Gyr from low to high σ; (2) [Fe/H] varies by less than 0.1 dex across the entire sample; (3) Mg closely tracks O, and both increase from ≈0.0 at low σ to ∼0.25 at high σ; Si and Ti show a shallower rise with σ, and Ca tracks Fe rather than O; (4) the iron peak elements V, Cr, Mn, and Ni track Fe, while Co tracks O, suggesting that Co forms primarily in massive stars; (5) C and N track O over the full sample and [C/Fe] and [N/Fe] exceed 0.2 at high σ; and (6) the variation in Δ T {sub eff} with total metallicity closely follows theoretical predictions based on stellar evolution theory. This last result is significant because it implies that we are robustly solving not only for the detailed abundance patterns but also the detailed temperature distributions (i.e., isochrones) of the stars in these galaxies. A variety of tests reveal that the systematic uncertainties in our measurements are probably 0.05 dex or less. Our derived [Mg/Fe] and [O/Fe] abundance ratios are 0.05-0.1 dex lower than most previous determinations. Under the conventional interpretation that the variation in these ratios is due to star formation timescale variations, our results suggest longer star formation timescales for massive early-type galaxies than previous studies. Detailed chemical evolution models are necessary in order to translate the abundance ratio distributions of these galaxies into constraints on their formation histories. Alternatively, these data may provide useful constraints on the nucleosynthetic pathways for elements whose production is not well understood.

79 ASTRONOMY AND ASTROPHYSICS↗

Spectral energy distribution fitting of HETDEX pilot survey Lyα emitters in cosmos and GOODS-N

We use broadband photometry extending from the rest-frame UV to the near-IR to fit the individual spectral energy distributions of 63 bright (L(Lyα) > 10{sup 43} erg s{sup –1}) Lyα emitting galaxies (LAEs) in the redshift range 1.9 < z < 3.6. We find that these LAEs are quite heterogeneous, with stellar masses that span over three orders of magnitude, from 7.5 < log M/M {sub ☉} < 10.5. Moreover, although most LAEs have small amounts of extinction, some high-mass objects have stellar reddenings as large as E(B – V) ∼ 0.4. Interestingly, in dusty objects the optical depths for Lyα and the UV continuum are always similar, indicating that Lyα photons are not undergoing many scatters before escaping their galaxy. In contrast, the ratio of optical depths in low-reddening systems can vary widely, illustrating the diverse nature of the systems. Finally, we show that in the star-formation-rate-log-mass diagram, our LAEs fall above the 'main-sequence' defined by z ∼ 3 continuum selected star-forming galaxies. In this respect, they are similar to submillimeter-selected galaxies, although most LAEs have much lower mass.

79 ASTRONOMY AND ASTROPHYSICS↗

Seven-period asteroseismic fit of the Kepler DBV

We present a new, better-constrained asteroseismic analysis of the helium-atmosphere (DB) white dwarf discovered in the field of view of the original Kepler mission. Observations obtained over the course of 2 yr yield at least seven independent modes, two more than were found in the discovery paper for the object. With several triplets and doublets, we are able to fix the ℓ and m identification of several modes before performing the fitting, greatly reducing the number of assumptions we must make about mode identification. We find a very thin helium layer for this relatively hot DB, which adds evidence to the hypothesis that helium diffuses outward during DB cooling. At least a few of the modes appear to be stable on evolutionary timescales and could allow us to obtain a measurement of the rate of cooling with monitoring of the star over the course of the next few years with ground-based follow-up.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

BayeSED: A GENERAL APPROACH TO FITTING THE SPECTRAL ENERGY DISTRIBUTION OF GALAXIES

We present a newly developed version of BayeSED, a general Bayesian approach to the spectral energy distribution (SED) fitting of galaxies. The new BayeSED code has been systematically tested on a mock sample of galaxies. The comparison between the estimated and input values of the parameters shows that BayeSED can recover the physical parameters of galaxies reasonably well. We then applied BayeSED to interpret the SEDs of a large K{sub s} -selected sample of galaxies in the COSMOS/UltraVISTA field with stellar population synthesis models. Using the new BayeSED code, a Bayesian model comparison of stellar population synthesis models has been performed for the first time. We found that the 2003 model by Bruzual and Charlot, statistically speaking, has greater Bayesian evidence than the 2005 model by Maraston for the K{sub s} -selected sample. In addition, while setting the stellar metallicity as a free parameter obviously increases the Bayesian evidence of both models, varying the initial mass function has a notable effect only on the Maraston model. Meanwhile, the physical parameters estimated with BayeSED are found to be generally consistent with those obtained using the popular grid-based FAST code, while the former parameters exhibit more natural distributions. Based on the estimated physical parameters of the galaxies in the sample, we qualitatively classified the galaxies in the sample into five populations that may represent galaxies at different evolution stages or in different environments. We conclude that BayeSED could be a reliable and powerful tool for investigating the formation and evolution of galaxies from the rich multi-wavelength observations currently available. A binary version of the BayeSED code parallelized with Message Passing Interface is publicly available at https://bitbucket.org/hanyk/bayesed.

79 ASTRONOMY AND ASTROPHYSICS↗

A global fit of the γ-ray galactic center excess within the scalar singlet Higgs portal model

We analyse the excess in the γ-ray emission from the center of our galaxy observed by Fermi-LAT in terms of dark matter annihilation within the scalar Higgs portal model. In particular, we include the astrophysical uncertainties from the dark matter distribution and allow for unspecified additional dark matter components. We demonstrate through a detailed numerical fit that the strength and shape of the γ-ray spectrum can indeed be described by the model in various regions of dark matter masses and couplings. Constraints from invisible Higgs decays, direct dark matter searches, indirect searches in dwarf galaxies and for γ-ray lines, and constraints from the dark matter relic density reduce the parameter space to dark matter masses near the Higgs resonance. We find two viable regions: one where the Higgs-dark matter coupling is of O(10{sup −2}), and an additional dark matter component beyond the scalar WIMP of our model is preferred, and one region where the Higgs-dark matter coupling may be significantly smaller, but where the scalar WIMP constitutes a significant fraction or even all of dark matter. Both viable regions are hard to probe in future direct detection and collider experiments.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗