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At least 541 records · Page 30

Graph-EAM: An Interpretable and Efficient Graph Neural Network Potential Framework

The development of deep learning interatomic potentials has enabled efficient and accurate computations in quantum chemistry and materials science, circumventing computationally expensive ab initio calculations. However, the huge number of learnable parameters in deep learning models and their complex architectures hinder physical interpretability and affect the robustness of the derived potential. In this work, we propose graph-EAM, a lightweight graph neural network (GNN) inspired by the empirical embedded atom method to model the interatomic potential of single-element structures. Four material systems: platinum, niobium, silicon, and amorphous-carbon, for which quantum simulation data sets are publicly available, are examined to demonstrate that graph-EAM can achieve high energy and force prediction accuracy-comparable or better than existing state-of-the-art machine learning models-with much fewer parameters. It is also shown that the explicit inclusion of the angular information via three-body atomic density increases the prediction accuracy. In conclusion, the accuracy and efficiency of potentials obtained from graph-EAM can help accelerate the molecular dynamics simulation.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Coupling High-Throughput Experiments and Regression Algorithms to Optimize PGM-Free ORR Electrocatalyst Synthesis

Over the past decades, significant improvement has been achieved in the performance of platinum group metal-free (PGM-free) materials as an alternative to Pt-based electrocatalysts for oxygen reduction reaction (ORR). However, further progress in ORR activity requires evaluation of precursors and synthesis approaches. In response to this challenge, we generated a first of its kind experimental data set of 36 samples using high-throughput synthesis and activity measurements. Several control parameters (e.g., Fe precursor identity, the precursor content, and pyrolysis temperature) were varied. We then developed several state-of-the-art machine learning (ML) based regression models to predict ORR activity, dependent on selected synthesis variables. Through an iterative algorithm, higher prediction accuracy (smaller root-mean-square error) was achieved. We identified that gradient boosting regression (GBR) and support vector regression (SVR), among several methods, work best for this data set. Aided by our ML-based surrogate models, we decided to alter catalyst synthesis conditions, which resulted in a 36% increase in measured ORR activity in comparison to the maximum ORR mass activity value of 21.9 A/g catalyst in the original data set. Overall, this combined experiment and machine learning approach represents a promising path forward toward developing highly efficient next-generation ORR electrocatalysts and, more generally, functional materials.

25 ENERGY STORAGE↗

Detecting lithium plating dynamics in a solid-state battery with operando X-ray computed tomography using machine learning

Operando X-ray micro-computed tomography (µCT) provides an opportunity to observe the evolution of Li structures inside pouch cells. Segmentation is an essential step to quantitatively analyzing µCT datasets but is challenging to achieve on operando Li-metal battery datasets due to the low X-ray attenuation of the Li metal and the sheer size of the datasets. Herein, we report a computational approach, batteryNET, to train an Iterative Residual U-Net-based network to detect Li structures. The resulting semantic segmentation shows singular Li-related component changes, addressing diverse morphologies in the dataset. In addition, visualizations of the dead Li are provided, including calculations about the volume and effective thickness of electrodes, deposited Li, and redeposited Li. We also report discoveries about the spatial relationships between these components. The approach focuses on a method for analyzing battery performance, which brings insight that significantly benefits future Li-metal battery design and a semantic segmentation transferrable to other datasets.

25 ENERGY STORAGE↗

Molecular dynamics studies of knotted polymers

Molecular dynamics calculations have been used to explore the influence of knots on the strength of a polymer strand. In particular, the mechanism of breaking 31, 41, 51, and 52 prime knots has been studied using two very different models to represent the polymer: (1) the generic coarse-grained (CG) bead model of polymer physics and (2) a state-of-the-art machine learned atomistic neural network (NN) potential for polyethylene derived from electronic structure calculations. While there is a broad overall agreement between the results on the influence of the pulling rate on chain rupture based on the CG and atomistic NN models, for the simple 31 and 41 knots, significant differences are found for the more complex 51 and 52 knots. Notably, in the latter case, the NN model more frequently predicts that these knots can break not only at the crossings at the entrance/exit but also at one of the central crossing points. The relative smoothness of the CG potential energy surface also leads to stabilization of tighter knots compared to the more realistic NN model.

DelloStritto, Mark (ORCID:0000000206785860)↗

Electrochemically addressable trisradical rotaxanes organized within a metal–organic framework

Significance This research paper presents a strategy for the organization of artificial molecular switches based on mechanically interlocked molecules within a porous crystalline framework. Once arranged within the pores of the framework, the electronic state of the switches can be altered by the application of an electrochemical potential. This strategy is particularly useful when it comes to integrating dynamic, stimulus-responsive, mechanically interlocked molecules with the robustness and periodicity of porous solids. The findings of the research establish proof-of-concept for the application of postsynthetic transformations of porous crystalline frameworks in the creation of solid-state molecular switches and machines.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Popnet : computer vision based deep learning model for forecasting gridded population

Here, this study introduces Popnet, a deep learning model for forecasting 1 km-gridded populations, integrating U-Net, ConvLSTM, a Spatial Autocorrelation module and deep ensemble methods. Using spatial variables and population data from 2000 to 2020, Popnet predicts South Korea’s population trends by age groups (under 14, 15-64 and over 65) up to 2040. In validation, it outperforms traditional machine learning and state-of-the-art computer vision models. The output of this model discovered significant polarisation: population growth in urban areas, especially the capital region, and severe depopulation in rural areas. Popnet is a robust tool for offering significant insights to policymakers and related stakeholders about the detailed future population, which allows them to establish detailed, localised planning and resource allocations.

computer vision↗

Transformer quantum state: A multipurpose model for quantum many-body problems

Here, inspired by the advancements in large language models based on transformers, we introduce the transformer quantum state (TQS): a versatile machine learning model for quantum many-body problems. In sharp contrast to Hamiltonian/task specific models, TQS can generate the entire phase diagram, predict field strengths with experimental measurements, and transfer such a knowledge to new systems it has never been trained on before, all within a single model. With specific tasks, fine-tuning the TQS produces accurate results with small computational cost. Versatile by design, TQS can be easily adapted to new tasks, thereby pointing towards a general-purpose model for various challenging quantum problems.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Hybrid Data-Driven Physics-Based Model Framework Implementation: Towards a Secure Cyber-Physical Operation of the Smart Grid

False data injection cyber-attack detection models on smart grid operation have been much explored recently, considering analytical physics-based and data-driven solutions. Recently, a hybrid data-driven physics-based model framework for monitoring the smart grid is developed. However, the framework has not been implemented in real-time environment yet. In this paper, the framework of the hybrid model is developed within a real-time simulation environment. OPAL-RT real-time simulator is used to enable Hardware-in-the-Loop testing of the framework. IEEE 9-bus system is considered as a testing grid for gaining insight. The process of building the framework and the challenges faced during development are presented. The performance of the framework is investigated under various false data injection attacks.

false data injection attack, machine learning, sta↗

Security Enhancement of Network Constraint Grid-Edge Energy Management System

Network constrained grid edge energy management system (EMS) provides economic solution for active and reactive power dispatch of distributed energy resources (DERs) at the grid edge level. Grid edge EMS ensures secure interconnection of a circuit segment to the distribution system by maintaining grid code requirements (e.g. IEEE 1547–2018). Grid edge EMS is dependent on communication to receive load measurement, which brings a risk of unobservable false data injection attacks (FDIAs). To mitigate the risk, this paper proposes a framework to enhance resilient operation of grid edge EMS by detecting the unobservable FDIAs on loads and replacing them with forecasted values. In this work, a two-step detection algorithm is proposed. In first step, conventional residual based algorithm is deployed. Autoencoder (AE) based data driven mechanism is included in second step to detect the presence of unobservable FDIAs. After ensuring the presence of FDIA, its specific location is detected by checking the maximum residue values till the predefined threshold value is reached. Detected false data injected loads are then replaced with forecasted load values following long-short term memory (LSTM) based forecast to ensure resilient performance of grid edge EMS in the presence of attacks. This proposed security enhancement framework for grid edge EMS is evaluated in IEEE 13 bus system with three integrated DERs. Numerical simulation shows the validation of the proposed framework by reducing voltage violation in real operation of grid edge EMS.

cyber attack detection↗

Model-Free State Estimation Using Low-Rank Canonical Polyadic Decomposition

As electric grids experience high penetration levels of renewable generation, fundamental changes are required to address real-time situational awareness. Here, we utilize unique traits of tensors to devise a model-free situational awareness and energy forecasting framework for distribution networks. This work formulates the state of the network at multiple time instants as a three-way tensor; hence, recovering full state information of the network is tantamount to estimating all the values of the tensor. Given measurements received from µphasor measurement units and/or smart meters, the recovery of unobserved quantities is carried out using the low-rank canonical polyadic decomposition of the state tensor—that is, the state estimation task is posed as a tensor imputation problem utilizing observed patterns in measured (sampled) quantities. Two structured sampling schemes are considered, namely, asynchronous slab and fiber sampling. For both schemes, we present sufficient conditions on the number of sampled slabs and fibers that guarantee identifiability of the factors of the state tensor. Numerical results demonstrate the ability of the proposed framework to achieve high estimation accuracy in multiple sampling scenarios.

42 ENGINEERING↗

Online Anomaly Detection Using Machine Learning and HPC for Power System Synchrophasor Measurements

This paper presents an online early anomaly detection framework for phasor measurement units (PMUs) to monitor the power system dynamics and help prevent blackouts using machine learning approaches. Dynamical machine learning solutions including state space model and Kalman filter are conducted in this study to learn the nonlinear and nonstationary PMU measurements and accurately predict system behaviors in real-time. The anomalies can be detected within seconds by comparing the predicted system behaviors with the real system observations. The method proposed in this framework trains PMU data with a given time window (e.g., 5 seconds) using a dynamic nonlinear model, and then predicts system behaviors during the following time window. High prediction accuracy is achieved by applying the dynamic nonlinear model to the real-world PMU measurements – the anomalies detected are successfully validated given the recorded real-world events. High-performance-computing (HPC) techniques are utilized to further reduce computational time to provide real time power system situational awareness.

Ren, Huiying↗

HIDES: Hybrid Intrusion Detector for Energy Systems

The establishment of a resilient electric grid accompanied by a secure communications network is an ongoing battle as advanced persistent threats continue to exploit existing vulnerabilities in legacy supervisory control and data acquisition system (SCADA) infrastructure. Traditional intrusion detection systems (IDSs) lack consistent performance because of the continuously evolving attack surface of SCADA systems. These shortcomings can be overcome by integrating logical system behavior, protocol-specific knowledge, and data-based learning to develop a comprehensive IDS solution. In this paper, we present a Hybrid Intrusion Detector for Energy Systems by integrating a network-based IDS, state-of-the-art machine learning-based IDS, and model-based IDS to detect unknown and stealthy cyberattacks targeting the SCADA networks. The proposed IDS uses synchrophasor measurements and cyber logs to learn patterns of different scenarios based on spatiotemporal behaviors of power systems. As a proof of concept, we implement and validate the proposed IDS by leveraging resources available at the National Renewable Energy Laboratory's Energy Systems Integration Facility test bed. Experimental results show promising performance in detecting cyberattacks while providing realtime visualization of power system measurements and cyber logs.

machine-learning intrusion detection system↗

MO-G-304-02: Knowledge Based DVH Prediction Using a Geometric Dose Transform

Purpose: To demonstrate a novel method for predicting patient dose-volume histograms (DVHs) using a prior database of optimized radiotherapy treatment plans. Such predicted DVHs could be useful for automating treatment planning. Methods: Our initial demonstration utilized a database of 100 prostate intensity-modulated radiotherapy (IMRT) data-sets. Each data-set contained a CT image with contours of the planning target volume (PTV), rectum, and bladder, the parameters of a clinically approved IMRT plan, and a corresponding simulated dose distribution. We applied a novel geometric transformation to remove the influence of the PTV size, shape, and location on the dose distribution. We termed the transformed distribution the geometrically normalized dose distribution (GNDD). This normalization transform was applied to 80 data-sets randomly selected from the database, and a population GNDD was computed as the average. Next, the population GNDD was mapped onto each of the remaining 20 patient datasets using the reverse of the geometric normalization transform, and predicted DVHs were calculated from the reverse transformed dose distributions (GNDD-DVHs). In addition, a state of the art machine learning based method from the literature was tested for comparison. Results: DVH prediction accuracy was quantified by calculating the relative root mean squared error (rRMSE) on predicted DVHs for the 20 test patients using their known DVHs. For bladder, rectum, and PTV average rRMSEs for the GNDD method were 9.7 ± 4.2%, 13.9 ± 6.0%, and 2.3 ± 0.5% respectively. Prediction results using GNDD were roughly equivalent to that from the machine learning method. Conclusion: We developed a new method for predicting DVH curves from a database of prior patient plans. We demonstrated that our simple approach achieves accuracy comparable to a method using a complicated machine learning based approach.

60 APPLIED LIFE SCIENCES↗

acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data

Abstract Background A major obstacle in single-cell sequencing is sample contamination with foreign DNA. To guarantee clean genome assemblies and to prevent the introduction of contamination into public databases, considerable quality control efforts are put into post-sequencing analysis. Contamination screening generally relies on reference-based methods such as database alignment or marker gene search, which limits the set of detectable contaminants to organisms with closely related reference species. As genomic coverage in the tree of life is highly fragmented, there is an urgent need for a reference-free methodology for contaminant identification in sequence data. Results We present acdc, a tool specifically developed to aid the quality control process of genomic sequence data. By combining supervised and unsupervised methods, it reliably detects both known and de novo contaminants. First, 16S rRNA gene prediction and the inclusion of ultrafast exact alignment techniques allow sequence classification using existing knowledge from databases. Second, reference-free inspection is enabled by the use of state-of-the-art machine learning techniques that include fast, non-linear dimensionality reduction of oligonucleotide signatures and subsequent clustering algorithms that automatically estimate the number of clusters. The latter also enables the removal of any contaminant, yielding a clean sample. Furthermore, given the data complexity and the ill-posedness of clustering, acdc employs bootstrapping techniques to provide statistically profound confidence values. Tested on a large number of samples from diverse sequencing projects, our software is able to quickly and accurately identify contamination. Results are displayed in an interactive user interface. Acdc can be run from the web as well as a dedicated command line application, which allows easy integration into large sequencing project analysis workflows. Conclusions Acdc can reliably detect contamination in single-cell genome data. In addition to database-driven detection, it complements existing tools by its unsupervised techniques, which allow for the detection of de novo contaminants. Our contribution has the potential to drastically reduce the amount of resources put into these processes, particularly in the context of limited availability of reference species. As single-cell genome data continues to grow rapidly, acdc adds to the toolkit of crucial quality assurance tools.

59 BASIC BIOLOGICAL SCIENCES↗

Resonance Control for Future Linear Accelerators

Many of the next generation of particle accelerators (LCLS II, PIP II) are designed for relatively low beam loading. Low beam loading requirement means the cavities can operate with narrow bandwidths, minimizing capital and base operational costs of the RF power system. With such narrow bandwidths, however, cavity detuning from microphonics or dynamic Lorentz Force Detuning becomes a significant factor, and in some cases can significantly increase both the acquisition cost and the operational cost of the machine. In addition to the efforts to passive environmental detuning reduction (microphonics) active resonance control for the SRF cavities for next generation linear machine will be required. State of the art in the field of the SRF Cavity active resonance control and the results from the recent efforts at FNAL will be presented in this talk.

43 PARTICLE ACCELERATORS↗

Probabilistic Photometric Redshifts in the Era of Petascale Astronomy

With the growth of large photometric surveys, accurately estimating photometric redshifts, preferably as a probability density function (PDF), and fully understanding the implicit systematic uncertainties in this process has become increasingly important. These surveys are expected to obtain images of billions of distinct galaxies. As a result, storing and analyzing all of these photometric redshift PDFs will be non-trivial, and this challenge becomes even more severe if a survey plans to compute and store multiple different PDFs. In this thesis, we have developed an end-to-end framework that will compute accurate and robust photometric redshift PDFs for massive data sets by using two new, state-of-the-art machine learning techniques that are based on a random forest and a random atlas, respectively. By using data from several photometric surveys, we demonstrate the applicability of these new techniques, and we demonstrate that our new approach is among the best techniques currently available. We also show how different techniques can be combined by using novel Bayesian techniques to improve the photometric redshift precision to unprecedented levels while also presenting new approaches to better identify outliers. In addition, our framework provides supplementary information regarding the data being analyzed, including unbiased estimates of the accuracy of the technique without resorting to a validation data set, identification of poor photometric redshift areas within the parameter space occupied by the spectroscopic training data, and a quantification of the relative importance of the variables used during the estimation process. Furthermore, we present a new approach to represent and store photometric redshift PDFs by using a sparse representation with outstanding compression and reconstruction capabilities. We also demonstrate how this framework can also be directly incorporated into cosmological analyses. The new techniques presented in this thesis are crucial to enable the development of precision cosmology in the era of petascale astronomical surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

Assisting the Tooling and Machining Industry to Become Energy Efficient

The Arizona Commerce Authority (ACA) conducted an Innovation in Advanced Manufacturing Grant Competition to support and grow southern and central Arizona’s Aerospace and Defense (A&D) industry and its supply chain. The problem statement for this grant challenge was that many A&D machining processes utilize older generation CNC machine tool technologies that can result an inefficient use of resources – energy, time and materials – compared to the latest state-of-the-art CNC machines. Competitive awards funded projects to develop innovative new tools and technologies that reduce energy consumption for older generation machine tools and foster working relationships between industry small to medium-sized manufacturing enterprises and third-party solution providers. During the 42-month term of this grant, 12 competitive awards were made. Final reports have been included with this submission.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Estimating Residual Gas Beam Loss in the BNL AGS Booster:Model, Numerical Tools, and Implications for a Polarimeter Chamber

Beamloss from residual gas scattering is calculated for a storage ring of circumference C = 200m, covering a linear magnetic rigidity ramp from B ρ inj = 1.25Tm to B ρ ext = 9.50Tm over tramp = 1.00s. Three loss mechanisms are considered: nuclear inelastic reactions, single Coulomb scattering beyond the acceptance angle of the machine, and charge-state exchange for heavy ions. Calculations are performed for protons and Au 32+ ions, the latter being the charge state delivered by the EBIS pre-injector into the BNL AGS Booster. At a baseline vacuum of P 0 = 5 × 10 −11 mbar the integrated fractional beam loss over the full ramp is negligible for protons (< 0.001%) and 33.1% for Au 32+ . The impact of a 1m polarimeter section at elevated pressure P s = 5 × 10 −9 mbar is evaluated: the proton loss remains negligible, while the Au 32+ loss rises to 45.1%, establishing the vacuum requirement for the polarimeter chamber. In the present compact approximate model, Au 32+ losses are dominated by charge exchange at injection, while proton losses are dominated by single Coulomb scattering. The design, outgassing budget, pumping strategy, and commissioning sequence for a UHV polarimeter chamber housing silicon detectors and ASICs are described in detail.

43 PARTICLE ACCELERATORS↗