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At least 541 records · Page 30

The Solvation of the E. coli CheY Phosphorylation Site Mapped by XFMS

The Escherichia coli CheY protein belongs to a large bacterial response regulator superfamily. X-ray hydroxy radical foot-printing with mass spectroscopy (XFMS) has shown that allosteric activation of CheY by its motor target triggers a concerted internalization of aromatic sidechains. We reanalyzed the XFMS data to compare polar versus non-polar CheY residue positions. The polar residues around and including the 57D phosphorylated site had an elevated hydroxy radical reactivity. Bioinformatic measures revealed that a water-mediated hydrogen bond network connected this ring of residues with the central 57D. These residues solvated 57D to energetically stabilize the apo-CheY fold. The abundance of these reactive residues was reduced upon activation. This result was supported by the bioinformatics and consistent with the previously reported activation-induced increase in core hydrophobicity. It further illustrated XFMS detection of structural waters. Direct contacts between the ring residues and the phosphorylation site would stabilize the aspartyl phosphate. In addition, we report that the ring residue, 18R, is a constant central node in the 57D solvation network and that 18R non-polar substitutions determine CheY diversity as assessed by its evolutionary trace in bacteria with well-studied chemotaxis. These results showcase the importance of structured water dynamics for phosphorylation-mediated signal transduction.

59 BASIC BIOLOGICAL SCIENCES↗

Colossal transverse magnetoresistance due to nematic superconducting phase fluctuations in a copper oxide

Electronic anisotropy (“nematicity”) has been detected in cuprate superconductors by various experimental techniques. Using angle-resolved transverse resistance (ARTR) measurements, a very sensitive and background-free technique that can detect 0.5% anisotropy in transport, we have observed it also in La 2-x Sr x CuO 4 (LSCO) for 0.02 ≤ x ≤ 0.25. A central enigma in LSCO is the rotation of the nematic director (orientation of the largest longitudinal resistance) with temperature; this has not been seen before in any material. Here, we address this puzzle by measuring the angle-resolved transverse magnetoresistance (ARTMR) in LSCO. We report the discovery of colossal transverse magnetoresistance (CTMR)—an order-of-magnitude drop in the transverse resistivity in the magnetic field of 6 T. We show that the apparent rotation of the nematic director is caused by anisotropic superconducting fluctuations, which are not aligned with the normal electron fluid, consistent with coexisting bond-aligned and diagonal nematic orders. We quantify this by modeling the (magneto-)conductivity as a sum of normal (Drude) and paraconducting (Aslamazov–Larkin) channels but extended to contain anisotropic Drude and Cooper-pair effective mass tensors. Strikingly, the anisotropy of Cooper-pair stiffness is much larger than that of the normal electrons. It grows dramatically on the underdoped side, where the fluctuations become quasi-one-dimensional. Our analysis is general rather than model dependent. Still, we discuss some candidate microscopic models, including coupled strongly-correlated ladders where the transverse (interladder) phase stiffness is low compared with the longitudinal intraladder stiffness, as well as the anisotropic superconducting fluctuations expected close to the transition to a pair-density wave state.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Higher harmonic non-linear flow modes of charged hadrons in Pb-Pb collisions at $\sqrt{s_{\mathrm{NN}}}$ = 5.02 TeV

Anisotropic flow coefficients, v n , non-linear flow mode coefficients, χ n,mk , and correlations among different symmetry planes, ρ n,mk are measured in Pb-Pb collisions at $\sqrt{s_{NN}}$ = 5.02 TeV. Results obtained with multi-particle correlations are reported for the transverse momentum interval 0.2 < p T < 5.0 GeV/c within the pseudorapidity interval 0.4 < |η| < 0.8 as a function of collision centrality. The v n coefficients and χ n,mk and ρ n,mk are presented up to the ninth and seventh harmonic order, respectively. Calculations suggest that the correlations measured in different symmetry planes and the non-linear flow mode coefficients are dependent on the shear and bulk viscosity to entropy ratios of the medium created in heavy-ion collisions. The comparison between these measurements and those at lower energies and calculations from hydrodynamic models places strong constraints on the initial conditions and transport properties of the system.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Measurements of mixed harmonic cumulants in Pb–Pb collisions at √ s NN = 5.02 TeV

Correlations between moments of different flow coefficients are measured in Pb–Pb collisions at √ s NN = 5.02 TeV recorded with the ALICE detector. These new measurements are based on multiparticle mixed harmonic cumulants calculated using charged particles in the pseudorapidity region |η| < 0.8 with the transverse momentum range 0.2 < p T < 5.0 GeV/c. The centrality dependence of correlations between two flow coefficients as well as the correlations between three flow coefficients, both in terms of their second moments, are shown. In addition, a collection of mixed harmonic cumulants involving higher moments of v 2 and v 3 is measured for the first time, where the characteristic signature of negative, positive and negative signs of four-, six- and eight-particle cumulants are observed, respectively. The measurements are compared to the hydrodynamic calculations using iEBE-VISHNU with AMPT and TRENTo initial conditions. It is shown that the measurements carried out using the LHC Run 2 data in 2015 have the precision to explore the details of initial-state fluctuations and probe the nonlinear hydrodynamic response of v 2 and v 3 to their corresponding initial anisotropy coefficients and ε 2 and ε 3 . These new studies on correlations between three flow coefficients as well as correlations between higher moments of two different flow coefficients will pave the way to tighten constraints on initial-state models and help to extract precise information on the dynamic evolution of the hot and dense matter created in heavy-ion collisions at the LHC.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

ORNL Neutron Cross Section Measurements of 90 Zr NCSP ND-1 Task [Slides]

Luiz Leal's idea to integrate the experimental uncertainties, covariances, and sensitivities in this workflow and centralize the process at one location led to the creation of a cohesive tool for data testing. It has been practiced for more than two decades by the NCS and ND groups at ORNL. The development and use of the ORNL codes TSUNAMI and TSURFER within SCALE made it possible. Today, it has been extended to SAMINT which enables the coupling of differential and integral data evaluation in a continuous-energy framework.

43 PARTICLE ACCELERATORS↗

Charged-particle multiplicity fluctuations in Pb–Pb collisions at $\sqrt{s_{\mathrm {NN}}}$ = 2.76 TeV

Measurements of event-by-event fluctuations of charged-particle multiplicities in Pb–Pb collisions at $\sqrt{s_{\mathrm {NN}}}$ = 2.76 TeV using the ALICE detector at the CERN Large Hadron Collider (LHC) are presented in the pseudorapidity range |η| < 0.8 and transverse momentum 0.2 < p T < 2.0 GeV/c. The amplitude of the fluctuations is expressed in terms of the variance normalized by the mean of the multiplicity distribution. The η and p T dependences of the fluctuations and their evolution with respect to collision centrality are investigated. The multiplicity fluctuations tend to decrease from peripheral to central collisions. The results are compared to those obtained from HIJING and AMPT Monte Carlo event generators as well as to experimental data at lower collision energies. Additionally, the measured multiplicity fluctuations are discussed in the context of the isothermal compressibility of the high-density strongly-interacting system formed in central Pb–Pb collisions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

The Physics of the Coronal-line Region for Galaxies in Mapping Galaxies at Apache Point Observatory

The fundamental nature and extent of the coronal-line region (CLR), which may serve as a vital tracer for active galactic nucleus (AGN) activity, remain unresolved. Previous studies suggest that the CLR is produced by AGNdriven outflows and occupies a distinct region between the broad-line region and the narrow-line region, which places it tens to hundreds of parsecs from the galactic center. Here, we investigate 10 coronal line (CL; ionization potential ≳100 eV) emitting galaxies from the Sloan Digital Sky Survey IV Mapping Galaxies at Apache Point Observatory (MaNGA) catalog with emission from one or more CLs detected at ≥5$σ$ above the continuum in at least 10 spaxels—the largest such MaNGA catalog. We find that the CLR is far more extended, reaching out to 1.3–23 kpc from the galactic center. We crossmatch our sample of 10 CL galaxies with the largest existing MaNGA AGN catalog and identify seven in it; two of the remaining three are galaxy mergers and the final one is an AGN candidate. Further, we measure the average CLR electron temperatures as ranging between 12,331 and 22,530 K, slightly above the typical threshold for pure AGN photoionization (~20,000 K) and indicative of shocks (e.g., merger induced or from supernova remnants) in the CLR. In conclusion, we reason that ionizing photons emitted by the central continuum source (i.e., AGN photoionization) primarily generate the CLs, and that energetic shocks are an additional ionization mechanism that likely produce the most extended CLRs we measure.

79 ASTRONOMY AND ASTROPHYSICS↗

A full year of aerosol size distribution data from the central Arctic under an extreme positive Arctic Oscillation: insights from the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition

Abstract. The Arctic environment is rapidly changing due to accelerated warming in the region. The warming trend is driving a decline in sea ice extent, which thereby enhances feedback loops in the surface energy budget in the Arctic. Arctic aerosols play an important role in the radiative balance and hence the climate response in the region, yet direct observations of aerosols over the Arctic Ocean are limited. In this study, we investigate the annual cycle in the aerosol particle number size distribution (PNSD), particle number concentration (PNC), and black carbon (BC) mass concentration in the central Arctic during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition. This is the first continuous, year-long data set of aerosol PNSD ever collected over the sea ice in the central Arctic Ocean. We use a k-means cluster analysis, FLEXPART simulations, and inverse modeling to evaluate seasonal patterns and the influence of different source regions on the Arctic aerosol population. Furthermore, we compare the aerosol observations to land-based sites across the Arctic, using both long-term measurements and observations during the year of the MOSAiC expedition (2019–2020), to investigate interannual variability and to give context to the aerosol characteristics from within the central Arctic. Our analysis identifies that, overall, the central Arctic exhibits typical seasonal patterns of aerosols, including anthropogenic influence from Arctic haze in winter and secondary aerosol processes in summer. The seasonal pattern corresponds to the global radiation, surface air temperature, and timing of sea ice melting/freezing, which drive changes in transport patterns and secondary aerosol processes. In winter, the Norilsk region in Russia/Siberia was the dominant source of Arctic haze signals in the PNSD and BC observations, which contributed to higher accumulation-mode PNC and BC mass concentrations in the central Arctic than at land-based observatories. We also show that the wintertime Arctic Oscillation (AO) phenomenon, which was reported to achieve a record-breaking positive phase during January–March 2020, explains the unusual timing and magnitude of Arctic haze across the Arctic region compared to longer-term observations. In summer, the aerosol PNCs of the nucleation and Aitken modes are enhanced; however, concentrations were notably lower in the central Arctic over the ice pack than at land-based sites further south. The analysis presented herein provides a current snapshot of Arctic aerosol processes in an environment that is characterized by rapid changes, which will be crucial for improving climate model predictions, understanding linkages between different environmental processes, and investigating the impacts of climate change in future Arctic aerosol studies.

54 ENVIRONMENTAL SCIENCES↗

Measurement of internal dark current in a 17 GHz accelerator structure with an elliptical sidewall

A 17 GHz single cell, standing wave, copper accelerator structure with an axisymmetric elliptical central cell sidewall was tested for internal and downstream dark current as a function of gradient up to 93 MV/m. The elliptical sidewall was predicted to suppress the internal dark current and the lower order multipactor modes as compared with a previously tested structure having a straight sidewall. During the conditioning phase of the elliptical sidewall structure, strong internal dark current generated by an N = 1 multipactor mode was observed at gradients in the 10 to 20 MV/m range. After conditioning with 2.2x10^5 pulses to 93 MV/m, the N = 1 mode was completely suppressed and no multipactor resonances were observed. The internal dark current was reduced to a comparatively low level, much smaller than in the previously studied, straight sidewall structure, in good agreement with simulations. The energy spectrum of the electrons colliding with the sidewall was measured using an isolated side dark current monitor and a bias voltage. As the conditioning progressed, the electron energy spectrum showed an increase in the concentration of lower energy electrons, also in good agreement with simulations. Studies of internal dark current may help to understand the rf conditioning and ultimate performance of high gradient accelerator structures.

43 PARTICLE ACCELERATORS↗

PyPop: a mature open-source software pipeline for population genomics

Python for Population Genomics (PyPop) is a software package that processes genotype and allele data and performs large-scale population genetic analyses on highly polymorphic multi-locus genotype data. In particular, PyPop tests data conformity to Hardy-Weinberg equilibrium expectations, performs Ewens-Watterson tests for selection, estimates haplotype frequencies, measures linkage disequilibrium, and tests significance. Standardized means of performing these tests is key for contemporary studies of evolutionary biology and population genetics, and these tests are central to genetic studies of disease association as well. Here, we present PyPop 1.0.0, a new major release of the package, which implements new features using the more robust infrastructure of GitHub, and is distributed via the industry-standard Python Package Index. New features include implementation of the asymmetric linkage disequilibrium measures and, of particular interest to the immunogenetics research communities, support for modern nomenclature, including colon-delimited allele names, and improvements to meta-analysis features for aggregating outputs for multiple populations.

59 BASIC BIOLOGICAL SCIENCES↗

Multiplicity trigger detector for the S π RIT experiment

A multiplicity trigger detector (MTD) was developed for the SπRIT experiment that aims to probe the high- density symmetry energy via heavy-ion collisions (HICs). The MTD is designed to measure the charged-particle multiplicity in HICs to provide a trigger signal that can be used to select high-multiplicity events induced by central collisions. The MTD consists of two side-walls segmented into 30 plastic scintillation paddles, each equipped with a multi-pixel photon counter. A custom board with EASIROC front-end ASIC is used as readout electronics. A multiplicity logic signal is generated by an on-board FPGA that processes the discriminated signals from EASIROCs. The overall latency of the whole detector system for outputting the trigger is less than 100 ns, including 52 ns of electronics latency for processing the signals. During the measurement of 112 Sn + 124 Sn reactions at an incident energy of 270 MeV/nucleon, the minimum multiplicity threshold of the MTD was set to 4, where the overall trigger efficiency was obtained to be about 39 % for inclusive nuclear reactions. Furthermore, a simulation study with a numerical calculation of HICs found that the central collisions of impact parameters of less than 4 fm can be triggered with a high efficiency of more than 95 % by the experimental trigger condition.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Observations of Fog-Aerosol Interactions Over Central Greenland

Supercooled fogs can have an important radiative impact at the surface of the Greenland Ice Sheet, but they are difficult to detect and our understanding of the factors that control their lifetime and radiative properties is limited by a lack of observations. This study demonstrates that spectrally resolved measurements of downwelling longwave radiation can be used to generate retrievals of fog microphysical properties (phase and particle effective radius) when the fog visible optical depth is greater than ~0.25. For 12 cases of fog under otherwise clear skies between June and September 2019 at Summit Station in central Greenland, nine cases were mixed-phase. The mean ice particle (optically-equivalent sphere) effective radius was 24.0 ± 7.8 µm, and the mean liquid droplet effective radius was 14.0 ± 2.7 µm. These results, combined with measurements of aerosol particle number concentrations, provide evidence supporting the hypotheses that (a) low surface aerosol particle number concentrations can limit fog liquid water path, (b) fog can act to increase near-surface aerosol particle number concentrations through enhanced mixing, and (c) multiple fog events in quiescent periods gradually deplete near-surface aerosol particle number concentrations.

54 ENVIRONMENTAL SCIENCES↗

Localized mix-induced radiative cooling in a capsule implosion at the National Ignition Facility

In this work, w present direct measurements of electron temperature variations within an inertially confined deuterium-tritium plasma caused by localized mix of higher-Z materials into the central hot spot. The data are derived from newly developed differentially filtered penumbral imaging of the bremsstrahlung continuum emission. Our analysis reveals distinct localized emitting features in the stagnated hot-spot plasma, and we infer spatial variations in the electron temperature: the mixed region is 660±130eV colder than the surrounding hot-spot plasma at 3.26±0.11keV. Our analysis of the energy flow shows that we measure approximately steady-state conditions where the radiative losses in the mix region are balanced by heat conduction from the surrounding hot deuterium-tritium plasma.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Characteristics and sources of fluorescent aerosols in the central Arctic Ocean

The Arctic is sensitive to cloud radiative forcing. Due to the limited number of aerosols present throughout much of the year, cloud formation is susceptible to the presence of cloud condensation nuclei and ice nucleating particles (INPs). Primary biological aerosol particles (PBAP) contribute to INPs and can impact cloud phase, lifetime, and radiative properties. We present yearlong observations of hyperfluorescent aerosols (HFA), tracers for PBAP, conducted with a Wideband Integrated Bioaerosol Sensor, New Electronics Option during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition (October 2019–September 2020) in the central Arctic. We investigate the influence of potential anthropogenic and natural sources on the characteristics of the HFA and relate our measurements to INP observations during MOSAiC. Anthropogenic sources influenced HFA during the Arctic haze period. But surprisingly, we also found sporadic “bursts” of HFA with the characteristics of PBAP during this time, albeit with unclear origin. The characteristics of HFA between May and August 2020 and in October 2019 indicate a strong contribution of PBAP to HFA. Notably from May to August, PBAP coincided with the presence of INPs nucleating at elevated temperatures, that is, >–9°C, suggesting that HFA contributed to the “warm INP” concentration. The air mass residence time and area between May and August and in October were dominated by the open ocean and sea ice, pointing toward PBAP sources from within the Arctic Ocean. As the central Arctic changes drastically due to climate warming with expected implications on aerosol–cloud interactions, we recommend targeted observations of PBAP that reveal their nature (e.g., bacteria, diatoms, fungal spores) in the atmosphere and in relevant surface sources, such as the sea ice, snow on sea ice, melt ponds, leads, and open water, to gain further insights into the relevant source processes and how they might change in the future.

54 ENVIRONMENTAL SCIENCES↗

Delayed Neutron Temporal Signatures for Uranium Enrichment Measurement NA-241 SGTech (Final Report)

Nondestructive determination of uranium enrichment is a core capability for nuclear material accounting and control (NMAC) and safeguards verification measurements; however, traditional gamma spectroscopy-based techniques for enrichment measurement rely on significant assumptions of material composition and geometry, precluding their use in scenarios where a heterogeneous spatial distribution of enrichments is encountered. As an alternative, we are developing a technique to use delayed neutron temporal signatures for the measurement of uranium enrichment. Each uranium isotope has unique delayed neutron group yields, resulting in a unique delayed neutron decay time profile which can be analyzed to determine enrichment without the need for calibration sources. As part of this effort, we performed a series of measurement campaigns in which we used an active well coincidence counter (AWCC) retrofitted with commercial D-D and D-T generators to evaluate the operational characteristics of this method in response to a set of uranium enrichment and mass standards, as well as representative diversion scenarios in which either “concealed” enriched uranium is shielded by depleted uranium or declared enriched uranium is “hollowed out” and replaced with a central region of depleted uranium. A standard operating procedure and best practices were compiled to facilitate the use of delayed neutron-based enrichment measurements for international safeguards inspections.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

MEASUREMENT OF THE GENERALIZED POLARIZABILITIES OF THE PROTON IN VIRTUAL COMPTON SCATTERING

Understanding how the visible matter in the universe arises from its elementary quark and gluon constituents is a central question for science. The visible world is founded on the proton, the only composite building block of matter that is stable in nature. Consequently, understanding the formation of matter relies on explaining the dynamics and the properties of the proton?s bound state. A fundamental property of the proton involves the system?s response to an external electromagnetic (EM) field. It is characterized by the EM polarizabilities that describe how easily the charge and magnetization distributions inside the system are distorted by the EM field. When the polarizabilities are generalized to finite momentum transfer, their Fourier transform can map out the spatial distribution of the polarization densities in a proton subject to an EM field. This thesis focuses on the measurement of the proton generalized polarizabilities (GPs) at low four-momentum transfer in experimental Hall C at the Thomas Jefferson National Accelerator Facility (TJNAF). Among the six independent GPs, we will focus on the electric (aE1) and the magnetic (bM1) scalar GPs. The GPs can be accessed through measurements of the Virtual Compton Scattering reaction, by replacing the incoming real photon of the Compton scattering process with a space-like virtual photon. The outgoing real photon provides the EM perturbation to the system. In addition, the Dispersion Relation Formalism is used for generalized polarizability extraction. In this work, the two scalar GPs measured with unprecedented precision, and the measurements help explore a momentum transfer region where an anomalous enhancement of the electric GP that contradicts the predictions of nuclear theory has been observed.

Li, Ruonan↗

First measurements of the absolute branching fraction of Λ c ( 2625 ) + → Λ c + π + π − and upper limit on Λ c ( 2595 ) + → Λ c + π + π −

The absolute branching fraction of the decay Λ c ( 2625 ) + → Λ c + π + π − is measured for the first time to be ( 50.2 ± 5.7 stat ± 3.5 syst ) % with 368.48 pb − 1 of e + e − collision data collected by the BESIII detector at the center-of-mass energies of s = 4.918 and 4.950 GeV. Although the central value of the result is lower than the theoretical prediction of 67%, obtained from isospin symmetry, they are consistent taking the uncertainties into account. This is the first absolute branching fraction measurement for Λ c ( 2625 ) + since it was found. This measurement is necessary to obtain the coupling constants for the transitions between s -wave and p -wave charmed baryons in heavy hadron chiral perturbation theory. In addition, we search for the decay Λ c ( 2595 ) + → Λ c + π + π − . No significant signal is observed, and the upper limit on its branching fraction is determined to be 85.0% at the 90% confidence level. Published by the American Physical Society 2024

Astronomy & Astrophysics↗

Magnetic Field Mapping Design for the MOLLER Spectrometer Magnets at Jefferson Lab

The Thomas Jefferson National Accelerator Facility (JLab) has developed a unique spectrometer system to study the weak interaction between electrons. The "Measurement of Lepton-Lepton Electroweak Reaction" (MOLLER) experiment, utilizing JLab's recent 12 GeV electron beam upgrade, is scheduled to operate for three years. Central to the MOLLER experiment are five water-cooled toroidal magnets, each with a unique geometry and seven-fold symmetry, designed to focus the particles. These magnets generate the magnetic field needed to separate incident beam electrons scattered from target electrons (Møller scattering) and protons (elastic e-p scattering) within a liquid hydrogen target. Here, this paper details the magnet field measuring technique developed to map all five MOLLER toroidal magnets at multiple locations inside and along the bore. It covers the design, mounting, and operation of the probe, along with the calibration procedure to determine the field and to prepare a field map for GEANT4 analysis. Additionally, the paper addresses the challenges of accurately measuring low magnetic fields.

Ghoshal, Probir K. [Thomas Jefferson National Acce↗