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At least 541 records · Page 30

Elastic properties of gold supracrystals: Effects of nanocrystal size, ligand length, and nanocrystallinity

Atomistic molecular dynamics simulations are performed to study the elastic properties of alkylthiol-functionalized gold supracrystals. The predicted Young’s and shear moduli are around 1 GPa and 100 MPa, respectively. We show that, with increasing NC size, the Young’s modulus decreases while the shear modulus essentially remains invariant; with increasing ligand length, the Young’s modulus increases but the shear modulus decreases. Moreover, significant increase in the Young’s modulus is seen when the polycrystalline NCs are replaced by single-crystal ones of the same size. All these are in reasonable agreement with available experiments. We attribute the mechanisms to the interaction between capping ligands as well as its variations caused by the change in ligand length and NC geometry. The results may deepen our understanding of elastic properties of the supracrystals and their influential factors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effects of laser-plasma instabilities on hydro evolution in an OMEGA-EP long-scale-length experiment

Laser-plasma instabilities and hydro evolution of the coronal plasma in an OMEGA EP long-scale-length experiment with planar targets were studied with particle-in-cell (PIC) and hydrodynamic simulations. Plasma and laser conditions were first obtained in a two-dimensional DRACO hydro simulation with only inverse-bremsstrahlung absorption. Using these conditions, an OSIRIS PIC simulation was performed to study laser absorption and hot-electron generation caused by laser-plasma instabilities (LPIs) near the quarter-critical region. The obtained PIC information was subsequently coupled to another DRACO simulation to examine how the LPIs affect the overall hydrodynamics. Lastly, the results showed that the LPI-induced laser absorption increased the electron temperature but did not significantly change the density scale length in the corona.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

In situ control of synchronous germanide/silicide reactions with Ge/Si core/shell nanowires to monitor formation and strain evolution in abrupt 2.7 nm channel length

The metal-semiconductor interface in self-aligned contact formation can determine the overall performance of nanoscale devices. This interfacial morphology is predicted and well researched in homogenous semiconductor nanowires (NWs) but was not pursued in heterostructured core/shell nanowires. Here, we found here that the solid-state reactions between Ni and Ge/Si core/shell nanowires resulted in a protruded and a leading NiSiy segment into the channel. A single Ni 2 Ge/NiSi y to Ge/Si core/shell interface was achieved by the selective shell removal near the Ni source/drain contact areas. In using in situ transmission electron microscopy, we measured the growth rate and anisotropic strain evolution in ultra-short channels. We also found elevated compressive strains near the interface between the compound contact and the NW and relatively lower strains near the center of the channel which increased exponentially below the 10 nm channel length to exceed 10% strain at ~3 nm lengths. These compressive strains are expected to result in a non-homogeneous energy band structure in Ge/Si core/shell NWs below 10 nm and potentially benefit their transistor performance.

36 MATERIALS SCIENCE↗

Electron critical gradient scale length measurements of ICRF heated L-mode plasmas at Alcator C-Mod tokamak

A profile for the critical gradient scale length ( L c ) has been measured in L-mode discharges at the Alcator C-Mod tokamak, where electrons were heated by an ion cyclotron range of frequency through minority heating with the intention of simultaneously varying the heat flux and changing the local gradient. The electron temperature gradient scale length ( L Te -1 = |∇ T e |/ T e ) profile was measured via the B T -jog technique and it was compared with electron heat flux from power balance (TRANSP) analysis. The T e profiles were found to be very stiff and already above the critical values, however, the stiffness was found to be reduced near the q = 3/2 surface. The measured L c profile is in agreement with electron temperature gradient (ETG) models which predict the dependence of L c -1 on local , Z eff , T e /T i , and the ratio of the magnetic shear to the safety factor. The results from linear Gene gyrokinetic simulations suggest ETG to be the dominant mode of turbulence in the electron scale ( k ⊥ ρ s > 1), and ion temperature gradient/trapped electron mode modes in the ion scale ( k ⊥ ρ s > 1). Finally, the measured L c profile is in agreement with the profile of ETG critical gradients deduced from GENE simulations.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

High energy electron diffraction instrument with tunable camera length

Ultrafast electron diffraction (UED) stands as a powerful technique for real-time observation of structural dynamics at the atomic level. In recent years, the use of MeV electrons from radio frequency guns has been widely adopted to take advantage of the relativistic suppression of the space charge effects that otherwise limit the temporal resolution of the technique. Nevertheless, there is not a clear choice for the optimal energy for a UED instrument. Scaling to beam energies higher than a few MeV does pose significant technical challenges, mainly related to the inherent increase in diffraction camera length associated with the smaller Bragg angles. In this study, we report a solution by using a compact post-sample magnetic optical system to magnify the diffraction pattern from a crystal Au sample illuminated by an 8.2 MeV electron beam. Our method employs, as one of the lenses of the optical system, a triplet of compact, high field gradients (>500 T/m), small-gap (3.5 mm) Halbach permanent magnet quadrupoles. Shifting the relative position of the quadrupoles, we demonstrate tuning the magnification by more than a factor of two, a 6× improvement in camera length, and reciprocal space resolution better than 0.1 Å –1 in agreement with beam transport simulations.

47 OTHER INSTRUMENTATION↗

Effect of surface properties and polymer chain length on polymer adsorption in solution

In polymer nanoparticle composites (PNCs) with attractive interactions between nanoparticles (NPs) and polymers, a bound layer of the polymer forms on the NP surface, with significant effects on the macroscopic properties of the PNCs. The adsorption and wetting behaviors of polymer solutions in the presence of a solid surface are critical to the fabrication process of PNCs. In this study, we use both classical density functional theory (cDFT) and molecular dynamics (MD) simulations to study dilute and semi-dilute solutions of short polymer chains near a solid surface. Using cDFT, we calculate the equilibrium properties of polymer solutions near a flat surface while varying the solvent quality, surface–fluid interactions, and the polymer chain lengths to investigate their effects on the polymer adsorption and wetting transitions. Using MD simulations, we simulate polymer solutions near solid surfaces with three different curvatures (a flat surface and NPs with two radii) to study the static conformation of the polymer bound layer near the surface and the dynamic chain adsorption process. Additionally, we find that the bulk polymer concentration at which the wetting transition in the poor solvent system occurs is not affected by the difference in surface–fluid interactions; however, a threshold value of surface–fluid interaction is needed to observe the wetting transition. We also find that with good solvent, increasing the chain length or the difference in the surface–polymer interaction relative to the surface–solvent interaction increases the surface coverage of polymer segments and independent chains for all surface curvatures. Finally, we demonstrate that the polymer segmental adsorption times are heavily influenced only by the surface–fluid interactions, although polymers desorb more quickly from highly curved surfaces.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Bond length alternation of π -conjugated polymers predicted by the Fermi–Löwdin orbital self-interaction correction method

π-conjugated polymers have been used in a wide range of practical applications, partly due to their unique properties that originate in the delocalization of electrons through the polymer backbone. The level of delocalization can be characterized by the induced bond length alternation (BLA), with shorter BLA connected with strong delocalization and vice versa. The accurate description of this structural parameter can be considered a benchmark for testing the capability of different electronic structure methods for self-interaction error (SIE) removal and electron correlation inclusion. Density functional theory (DFT), in its local or semi-local flavors, suffers from SIE and, thus, underestimates the BLA compared to self-interaction-free methods. In this work, we utilize the Fermi–Löwdin orbital self-interaction correction (FLOSIC) method for one-electron self-interaction removal to characterize the BLA of five oligomers with increasing length extrapolated to the polymeric limit. We compare the self-interaction-free BLA to several DFT approximations, Møller–Plesset second-order perturbation theory (MP2), and the BLA obtained with the domain based local pair natural orbital CCSD(T) [DLPNO-CCSD(T)] approximation. Our findings show that FLOSIC corrects for the small BLA given by (semi-)local DFT approximations, but it tends to overcorrect with respect to CAM-B3LYP, MP2, and DLPNO-CCSD(T).

Chemistry↗

Influence of the laser beam size on the length of a filament formed by high-power femtosecond laser radiation in air

The single-filamentation regime of GW femtosecond laser beams of millimetre diameter, propagating in atmospheric air under collimated and tight focusing, has been theoretically and experimentally (at wavelengths of 800 and 400 nm) investigated. The influence of the initial size of the light beam on the spatial characteristics of the filamentation region is systematically analysed. The filamentation length for collimated beams with the same initial power is found to nonmonotonically depend on the initial beam radius. In this case, the filament start point is displaced, and the longitudinal continuity of the related plasma channel is lost. For tightly focused beams, the observed filament length barely depends of the initial beam radius, provided that the peak intensity remains constant. (interaction of radiation with matter)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Path length and spectrum of single-cycle mid-IR light bullets in transparent dielectrics

Filamentation of femtosecond laser radiation with a wavelength of 800 – 3900 nm and a power slightly exceeding the critical self-focusing power is studied using the spectral method and the method of laser coloration in LiF crystal. It is found that the length of a filament formed in the single-pulse regime increases with increasing excitation wavelength from a few tens of micrometres at 80 nm to hundreds of micrometres at 3900 nm. In the spectral region of anomalous group velocity dispersion, starting from 2600 nm, the initially smooth luminescence profile of the long-lived induced colour centres acquires a periodic structure, demonstrating the formation of a light bullet with a duration of about one cycle of the light field oscillation and a diameter smaller than 10 μm. The path length of such bullets does not exceed 0.5 mm in the single-pulse regime and 2.7 mm in the waveguide regime. A consequence of periodic modulation of the bullet light field in the process of propagation, observed experimentally and confirmed by calculations, is the appearance of sidebands near the excitation wavelength, as well as the appearance of visible spectral components in the supercontinuum radiation, whose angular divergence increases with increasing wavelength. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Precision loss measurements in short lengths of optical fibre by reflectometry without using Rayleigh scattering

To improve accuracy of light attenuation measurements in optical fibres, especially in short ones, tens and hundreds of metres in length, we propose rejecting a conventional reflectometric approach based on Rayleigh scattering intensity measurements. To this end, we propose for the first time the use of boson peaks in Raman scattering, which, on the one hand, produce no interference effects and no related noise in reflectograms, and, on the other, lie within the C-band. Even at a fibre length as short as 50 m, the attenuation measurement error does not exceed 0.002 dB km{sup −1}. We demonstrate the possibility of compensating for the temperature variation of boson peak intensity by concurrently obtaining a reflectogram for the anti-Stokes line of the fundamental Raman band. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Effect of recovery time of nonlinear absorber saturated losses on the soliton pulse structure in a fibre laser with different cavity lengths

Using numerical simulation methods, we have calculated the dependences of the pulse profile and spectrum of a ring fibre laser in the region of anomalous group velocity dispersion on the length of the laser cavity and the recovery time of the nonlinear absorber saturated losses. It is found that with increasing cavity length the laser pulse acquires a pedestal, the positions of its edges corresponding to the frequencies of the Kelly sidebands. It is shown that the finiteness of the recovery time of the saturable absorber leads to an asymmetry in the profile and spectrum of the laser pulse. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Dependence of emittance on the length of an electron bunch during laser-plasma acceleration in guiding structures

We report a theoretical analysis and numerical simulation of the dynamics of transverse emittance of an electron bunch during its acceleration in wake fields generated by a laser pulse in a weakly nonlinear mode. Analytical expressions are obtained for the main factors affecting the emittance growth during acceleration and the case is considered when the characteristic transverse size of the injected bunch exceeds the matched radius determined by the focusing force at the injection point, the initial emittance and the electron bunch energy, and the resulting value of emittance is much larger than the initial one. The dynamics of the emittance growth during acceleration as a function of the length of the electron bunch is described, and the length of the bunch is found at which there occurs a complete phase mixing of betatron oscillations of electrons and the emittance increases to its maximum value determined by the bunch parameters and the focusing force at the injection point. Analytical expressions are in good agreement with the results of numerical simulation. (paper)

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

First structure of full-length mammalian phenylalanine hydroxylase reveals the architecture of an autoinhibited tetramer

Improved understanding of the relationship among structure, dynamics, and function for the enzyme phenylalanine hydroxylase (PAH) can lead to needed new therapies for phenylketonuria, the most common inborn error of amino acid metabolism. PAH is a multidomain homo-multimeric protein whose conformation and multimerization properties respond to allosteric activation by the substrate phenylalanine (Phe); the allosteric regulation is necessary to maintain Phe below neurotoxic levels. A recently introduced model for allosteric regulation of PAH involves major domain motions and architecturally distinct PAH tetramers [Jaffe EK, Stith L, Lawrence SH, Andrake M, Dunbrack RL, Jr (2013) Arch Biochem Biophys 530(2):73–82]. Herein, we present, to our knowledge, the first X-ray crystal structure for a full-length mammalian (rat) PAH in an autoinhibited conformation. Chromatographic isolation of a monodisperse tetrameric PAH, in the absence of Phe, facilitated determination of the 2.9 Å crystal structure. The structure of full-length PAH supersedes a composite homology model that had been used extensively to rationalize phenylketonuria genotype–phenotype relationships. Small-angle X-ray scattering (SAXS) confirms that this tetramer, which dominates in the absence of Phe, is different from a Phe-stabilized allosterically activated PAH tetramer. The lack of structural detail for activated PAH remains a barrier to complete understanding of phenylketonuria genotype–phenotype relationships. Nevertheless, the use of SAXS and X-ray crystallography together to inspect PAH structure provides, to our knowledge, the first complete view of the enzyme in a tetrameric form that was not possible with prior partial crystal structures, and facilitates interpretation of a wealth of biochemical and structural data that was hitherto impossible to evaluate.

59 BASIC BIOLOGICAL SCIENCES↗

Cardinal: A Lower-Length-Scale Multiphysics Simulator for Pebble-Bed Reactors

This paper demonstrates a multiphysics solver for pebble-bed reactors, in particular, for Berkeley’s pebble-bed -fluoride-salt-cooled high-temperature reactor (PB-FHR) (Mark I design). The FHR is a class of advanced nuclear reactors that combines the robust coated particle fuel form from high-temperature gas-cooled reactors, the direct reactor auxiliary cooling system passive decay removal of liquid-metal fast reactors, and the transparent, high-volumetric heat capacitance liquid-fluoride salt working fluids (e.g., FLiBe) from molten salt reactors. This fuel and coolant combination enables FHRs to operate in a high-temperature, low-pressure design space that has beneficial safety and economic implications. The PB-FHR relies on a pebble-bed approach, and pebble-bed reactors are, in a sense, the poster child for multiscale analysis. Relying heavily on the MultiApp capability of the Multiphysics Object-Oriented Simulation Environment (MOOSE), we have developed Cardinal, a new platform for lower-length-scale simulation of pebble-bed cores. The lower-length-scale simulator comprises three physics: neutronics (OpenMC), thermal fluids (Nek5000/NekRS), and fuel performance (BISON). Cardinal tightly couples all three physics and leverages advances in MOOSE, such as the MultiApp system and the concept of MOOSE-wrapped applications. Moreover, Cardinal can utilize graphics processing units for accelerating solutions. In this paper, we discuss the development of Cardinal and the verification and validation and demonstration simulations.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Modeling organic electronic materials: bridging length and time scales

Organic electronics is a popular and rapidly growing field of research. The optical, electrical and mechanical properties of organic molecules and materials can be tailored using increasingly well controlled synthetic methods. The challenge and fascination with this field of research is derived from the fact that not only the chemical identity, but also the spatial arrangement of the molecules critically affects the performance of the material. Thus synthetic, fabrication, characterisation and computational scientists need to work closely to relate a materials performance in a device to the molecular details that cause and optimise that performance. For computational scientists in particular, the need to relate macroscopic device performance to details of molecular electronic structure brings challenges in methodology due to the need to bridge many orders of time and length scales. Furthermore, this article provides a survey of computational methods applied to multiple-length and time scale problems in organic electronic materials. Here we seek to highlight a few particular approaches that expand the simulation toolbox.

36 MATERIALS SCIENCE↗

Effective defect diffusion lengths in Ar-ion bombarded 3C-SiC

Above room temperature, SiC exhibits pronounced processes of diffusion and interaction of radiation-generated point defects. Here, we use the recently developed pulsed ion beam method to measure effective defect diffusion lengths in 3C-SiC bombarded in the temperature range of 25–200 °C with 500 keV Ar ions. Results reveal a diffusion length of ~10 nm, which exhibits a weak temperature dependence, changing from 9 to 13 nm with increasing temperature. Lastly, these results have important implications for understanding and predicting radiation damage in SiC and for the development of radiation-resistant materials via interface-mediated defect reactions.

36 MATERIALS SCIENCE↗

Filamentary surface plasma discharge flow length and time scales

Nanosecond surface dielectric barrier discharges (ns-SDBDs) are a class of plasma actuators that utilize a high-voltage pulse of nanosecond duration between two surface-mounted electrodes to create an electrical breakdown of air, along with rapid heating. These actuators usually produce multiple filaments when operated at high pulse frequencies, and the rapid heating leads to the formation of shock waves and complex flow fields. In this work we replicate a single filament of the ns-SDBDs and characterize the induced flow using velocity measurements from particle image velocimetry and density measurements from background-oriented schlieren. The discharge is produced by a high voltage electrical pulse between two copper electrodes on an acrylic base. A hot gas kernel characterizes the flow field formed close to the electrodes that expands and cools over time and a vortex ring that propagates away from the surface while entraining cold ambient fluid. The gas density deficit inside the kernel displays a power-law decay over time. Based on the observations, we develop a simplified theoretical model based on vortex-driven cooling and perform a scaling analysis to obtain the induced flow length and time scales. The results show that the cooling process's time scales correspond to a circulation-based time scale of the vortex ring, and the length scale of the kernel corresponds to the vortex ring radius. Furthermore, these findings can guide the choice of optimal filament spacing and pulse frequencies in the design, deployment, and operation of ns-SDBDs for flow control.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

The magnetic gradient scale length explains why certain plasmas require close external magnetic coils

Abstract The separation between the last closed flux surface of a plasma and the external coils that magnetically confine it is a limiting factor in the construction of fusion-capable plasma devices. This plasma-coil separation must be large enough so that components such as a breeding blanket and neutron shielding can fit between the plasma and the coils. Plasma-coil separation affects reactor size, engineering complexity, and particle loss due to field ripple. For some plasmas it can be difficult to produce the desired flux surface shaping with distant coils, and for other plasmas it is infeasible altogether. Here, we seek to understand the underlying physics that limits plasma-coil separation and explain why some configurations require close external coils. In this paper, we explore the hypothesis that the limiting plasma-coil separation is set by the shortest scale length of the magnetic field as expressed by the ∇ B tensor. We tested this hypothesis on a database of > 40 stellarator and tokamak configurations. Within this database, the coil-to-plasma distance compared to the minor radius varies by over an order of magnitude. The magnetic scale length is well correlated to the coil-to-plasma distance of actual coil designs generated using the REGCOIL method (Landreman 2017 Nucl. Fusion 57 046003). Additionally, this correlation reveals a general trend that larger plasma-coil separation is possible with a small number of field periods.

Physics↗