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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 541 records · Page 30
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

Effects of Polymer Morphology on Solvent and Catalyst Accessibility during Polyethylene and Polystyrene Autoxidation

Efficient catalytic deconstruction of plastics requires facile solvent and catalyst access to polymer substrates to minimize mass transfer effects. Autoxidation using Co(II) acetate, Mn(II) acetate, and a radical carrier in acetic acid is a promising strategy to deconstruct mixed plastic waste, yet the role of polymer morphology in governing solvent and catalyst accessibility remains poorly understood. Here, in situ simultaneous small- and wide-angle X-ray scattering (SAXS/WAXS), complemented by X-ray fluorescence (XRF) imaging and high-pressure differential scanning calorimetry (DSC), were used to elucidate interactions between acetic acid, a Co/Mn catalyst solution, and semicrystalline polyethylene (PE) and amorphous polystyrene (PS) from room temperature to 160 °C. In PE, acetic acid and catalyst access were confined to amorphous regions and cryomilled particle interfaces at room temperature, while crystalline lamellae remained intact after soaking for up to 34 h. Increasing temperature enabled solvent uptake into PE, followed by solvent-assisted softening above 100 °C, and a modest melting-point depression that removed lamellar transport barriers upon melting. Conversely for PS, acetic acid penetrated the glassy polymer without inducing chain mobility until the glass transition was reached, above which the observed structural changes were consistent with enhanced segmental mobility which enabled bulk penetration. These results suggest that polymer morphology and thermally activated physical transitions arising from diffusion and polymer–solvent interactions can influence whether autoxidation of plastics is transport-limited or kinetically controlled, providing a framework for aligning reaction conditions with reaction outcomes.

09 BIOMASS FUELS↗
DOE OSTI2020

Internal Fragments Generated by Electron Ionization Dissociation Enhance Protein Top-Down Mass Spectrometry

Top-down proteomics by mass spectrometry (MS) involves the mass measurement of an intact protein followed by subsequent activation of the protein to generate product ions. Electron-based fragmentation methods like electron capture dissociation and electron transfer dissociation are widely used for these types of analyses. Recently, electron ionization dissociation (EID), which utilizes higher energy electrons (>20 eV) has been suggested to be more efficient for top-down protein fragmentation compared to other electron-based dissociation methods. In this paper, we demonstrate that the use of EID enhances protein fragmentation and subsequent detection of protein fragments. Protein product ions can form by either single cleavage events, resulting in terminal fragments containing the C-terminus or N-terminus of the protein, or by multiple cleavage events to give rise to internal fragments that include neither the C-terminus nor the N-terminus of the protein. Conventionally, internal fragments have been disregarded, as reliable assignments of these fragments were limited. Here, we demonstrate that internal fragments generated by EID can account for ~20–40% of the mass spectral signals detected by top-down EID-MS experiments. By including internal fragments, the extent of the protein sequence that can be explained from a single tandem mass spectrum increases from ~50 to ~99% for 29 kDa carbonic anhydrase II and 8.6 kDa ubiquitin. When searching for internal fragments during data analysis, previously unassigned peaks can be readily and accurately assigned to confirm a given protein sequence and to enhance the utility of top-down protein sequencing experiments.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

193 nm Ultraviolet Photodissociation for the Characterization of Singly Charged Proteoforms Generated by MALDI

MALDI imaging allows for the near-cellular profiling of proteoforms directly from microbial, plant, and mammalian samples. Despite detecting hundreds of proteoforms, identification of unknowns with only intact mass information remains a distinct challenge, even with high mass resolving power and mass accuracy. To this end, many supplementary methods have been used to create experimental databases for accurate mass matching, including bulk or spatially resolved bottom-up and/or top-down proteomics. Herein, we describe the application of 193 nm ultraviolet photodissociation (UVPD) for fragmentation of quadrupole isolated singly charged ubiquitin (m/z 8565) by MALDI-UVPD on a UHMR HF Orbitrap. This platform permitted the high-resolution accurate mass measurement of not just terminal fragments but also large internal fragments. Finally, the outlined workflow demonstrates the feasibility of top-down analyses of isolated MALDI protein ions and the potential toward more comprehensive characterization of proteoforms in MALDI imaging applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

IsoMatchMS : Open-Source Software for Automated Annotation and Visualization of High Resolution MALDI-MS Spectra

Due to its speed, accuracy, and adaptability to various sample types, matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) has become a popular method to identify molecular isotope profiles from biological samples. Often MALDI-MS data do not include tandem MS fragmentation data, and thus the identification of compounds in samples requires external databases so that the accurate mass of detected signals can be matched to known molecular compounds. Most relevant MALDI-MS software tools developed to confirm compound identifications are focused on small molecules (e.g., metabolites, lipids) and cannot be easily adapted to protein data due to their more complex isotopic distributions. Here, we present an R package called IsoMatchMS for the automated annotation of MALDI-MS data for multiple datatypes: intact proteins, peptides, and glycans. This tool accepts already derived molecular formulas or, for proteomics applications, can derive molecular formulas from a list of input peptides or proteins including proteins with post-translational modifications. In conclusion, visualization of all matched isotopic profiles is provided in a highly accessible HTML format called a trelliscope display, which allows users to filter and sort by several parameters such as match scores and the number of peaks matched. IsoMatchMS simplifies the annotation and visualization of MALDI-MS data for downstream analyses.

47 OTHER INSTRUMENTATION↗
DOE OSTI2025

Unimodal Imaging of Monovalent Metal-Chelator Complexes and Lipids by MALDI Imaging Mass Spectrometry

Careful regulation of monovalent metal ions (M + ) is necessary to maintain a functional cellular system. Of these ions, appropriate sodium (Na + ) and potassium (K + ) concentrations are particularly integral for electrochemical signaling, as well as the secondary transport of nutrients and waste. Dysregulation of M + homeostasis can disrupt these mechanisms, potentially influencing the metabolism of downstream biomolecules such as lipids. Thus, the relationship between M + abundances and related biomolecular distributions must be elucidated to better understand the physiology of healthy and disordered tissues. Traditional techniques for imaging biological metal distributions include SIMS, LA-ICP-MS, and XRF; however, these capabilities are limited to elemental analysis or the analysis of molecular fragments and must be paired with other modalities to visualize distributions of more complex biomolecules within the same or similar samples. Conversely, matrix-assisted laser desorption/ionization imaging mass spectrometry (MALDI IMS) is a powerful tool often used for mapping such biomolecular distributions, but current methods are unable to detect metals within tissue. This study illustrates a novel methodology that adds metal detection to the MALDI IMS repertoire through which the simultaneous detection of M + metals and lipids is achievable. Using a robotic sprayer for homogeneous application, on-tissue deposition of the chelator deferiprone (DEF) enables subsequent detection of the ionizable metal-chelator complex by MALDI without hindering lipid detection. Our work provides proof-of-concept data for the simultaneous detection of K + , Na + , and intact lipids using MALDI IMS.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

Scalable En Echelon Shear‐Fracture Aperture‐Roughness Mechanism: Theory, Validation, and Implications

Abstract Shear fractures can facilitate fluid conductivity through rock. Aperture and roughness are controlling characteristics for a fracture's fluid conductivity. Inspired by en echelon fractures, we develop a shear “fracturelet” model that predicts anisotropic aperture with respect to the direction of shearing, rougher (nonplanar) rather than smoother (planar) fractures, and the bounds of this roughness for a coalesced fracture. This tendency for rougher fracture creation is validated by in situ X‐ray images and fluid conductivity measurements from triaxial direct shear experiments on anhydrite and shale. These experiments were conducted at confining stresses from 4 to 30 MPa and shear displacement magnitudes from 0 to 2 mm on initially intact rock specimens. Hydraulic, dilatational, and local fracture apertures were measured in the experiments. Apertures exhibited strong anisotropy with more conductive flow paths forming perpendicular to the direction of shearing. Local and dilatational aperture were found to be positively correlated with increasing shear displacement but hydraulic aperture was found to vary significantly, always having values smaller than the other aperture measures at factors ranging from 0.6 to 0.0. An implication of these results is that shear fractures have a mechanism for simultaneously exhibiting very low fluid conductivity and high fluid storage volume.

Frash, Luke P.↗
DOE OSTI2019

Experimental Relationship Between Compressional Wave Attenuation and Surface Strains in Brittle Rock

Linear ultrasonic testing (LUT) has been extensively used as a tool for the evaluation of damage processes in various materials ranging from synthetic metals to natural geomaterials, such as rocks. A key limitation of LUT-based damage studies to date is the lack of explicit evidence used in associating material damage with the changes in measured LUT attributes (e.g., ultrasonic wave amplitude and velocity). In this study, the evolution of the full-field strains in brittle rock specimens (Lyons sandstone) subjected to failure are analyzed in real time and linked with the changes in the ultrasonic wave amplitude in localized areas illuminated by ultrasonic beams, termed as the ultrasonic image areas. The noncontact optical full-field displacement measurement method of 2-D digital image correlation is implemented in combination with the LUT procedure to continuously track changes in the ultrasonic wave amplitude with the evolution of strains across the surface of the uniaxially loaded intact rock specimens. The ultrasonic amplitude showed near-linear correlation with the intensity of inelastic tensile strain recorded in the rock specimens. The results from the study corroborate that the ultrasonic changes are in fact influenced by the regions of tensile cracking, which is the primary inelastic deformation mechanism in brittle rocks.

15 GEOTHERMAL ENERGY↗
DOE OSTI2019

Improving Representation of Deforestation Effects on Evapotranspiration in the E3SM Land Model

Abstract Evapotranspiration (ET) plays an important role in land‐atmosphere coupling of energy, water, and carbon cycles. Following deforestation, ET is typically observed to decrease substantially as a consequence of decreases in leaf area and roots and increases in runoff. Changes in ET (latent heat flux) revise the surface energy and water budgets, which further affects large‐scale atmospheric dynamics and feeds back positively or negatively to long‐term forest sustainability. In this study, we used observations from a recent synthesis of 29 pairs of adjacent intact and deforested FLUXNET sites to improve model parameterization of stomatal characteristics, photosynthesis, and soil water dynamics in version 1 of the Energy Exascale Earth System Model (E3SM) Land Model (ELMv1). We found that default ELMv1 predicts an increase in ET after deforestation, likely leading to incorrect estimates of the effects of deforestation on land‐atmosphere coupling. The calibrated model accurately represented the FLUXNET observed deforestation effects on ET. Importantly, the search for global optimal parameters converged at values consistent with recent observational syntheses, confirming the reliability of the calibrated physical parameters. Applying this improved model parameterization to the globe scale reduced the bias of annual ET simulation by up to ~600 mm/year. Analysis on the roles of parameters suggested that future model development to improve ET simulation should focus on stomatal resistance and soil water‐related parameterizations. Finally, our predicted differences in seasonal ET changes from deforestation are large enough to substantially affect land‐atmosphere coupling and should be considered in such studies.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Discriminating Underground Nuclear Explosions Leading To Late-Time Radionuclide Gas Seeps

Utilizing historical data from the U.S. nuclear test program and freely available barometric pressure data, we performed an analytical barometric-pumping efficiency analysis to determine factors resulting in late-time radionuclide gas seeps from underground nuclear explosions. In this work, we considered 16 underground nuclear explosions with similar geology and test setup, of which five resulted in the measurement of late-time radionuclide gas concentrations at the ground surface. Additionally, the factors we considered include barometric frequency and amplitude, depth of burial, air-filled porosity, intact-rock permeability, fracture aperture, and fracture spacing. The analysis indicates that the best discriminators of late-time radionuclide gas seeps for these explosions are barometric frequency and amplitude and air-filled porosity. While geologic information on fracture aperture and spacing is not available for these explosions, the sensitivity of barometric-pumping efficiency to fracture aperture indicates that it would likely also be a good discriminator.

58 GEOSCIENCES↗
DOE OSTI2020

Thaw Transitions and Redox Conditions Drive Methane Oxidation in a Permafrost Peatland

Thawing permafrost, ground that has been frozen for 2 or more years, often results in wet conditions that promote the production of methane (CH 4 ). Methane is a greenhouse gas that is over 30 times more powerful than carbon dioxide at warming the atmosphere. Microorganisms called methanotrophs can consume a substantial portion of this CH 4 before it reaches the atmosphere, but the extent of this consumption is not well understood. Methanotrophs are affected by environmental conditions, such as oxygen availability, that change with permafrost thaw. We used laboratory experiments to measure how quickly methanotrophs consume CH 4 from sites within a permafrost peatland with little, intermediate, and full permafrost thaw. We found that CH 4 consumption increased as permafrost thawed and that sites transitioning between thaw stages had a different potential to consume CH 4 than intact and fully thawed sites. Methane consumption was also high in locations with low dissolved oxygen, which suggests that methanotrophs in these sites may tolerate low oxygen conditions in the field. We found that redox potential, a measurement that describes the tendency for a compound to be oxidized or reduced, was a strong predictor of CH 4 consumption in partially and fully thawed sites. Overall, these measurements highlight the potential for methanotrophs to mitigate CH 4 emissions in peatlands with thawing permafrost and provide new insights to modeling CH 4 dynamics across the full thaw gradient.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Hydraulic Modeling of Induced and Propagated Fractures: Analysis of Flow and Pressure Data From Hydromechanical Experiments in the COSC-1 Deep Borehole in Crystalline Rock Near Åre, Sweden

To characterize the coupled hydromechanical behavior of rock fractures, the step-rate injection method for fracture in-situ properties (SIMFIP) was conducted with a specialized downhole probe developed by Guglielmi et.al. In June 2019, a field campaign was carried out near Åre, Sweden, where the SIMFIP probe was applied in the Collisional Orogeny in the Scandinavian Caledonides-1 scientific borehole to understand the dynamics of injection-induced fracture initiation, fracture opening, and shearing due to water injection-withdrawal in a borehole interval isolated by two packers. Three intervals were investigated at ~500 m depth: (a) an unfractured section (intact rock), (b) a section with non-conductive fractures, and (c) a section with hydraulically conductive fractures. Pressure, injection flow rate, and borehole wall displacement were simultaneously measured during the tests. In the present study, the geometry of the induced fracture and deformation of existing fractures at different time stages of the tests are determined based on a hydrologic model by using the measured pressure and flow data during each time stage of the experiment. A numerical model for the fluid flow within the fracture and the packed-off borehole interval is implemented within COMSOL Multiphysics. By matching model simulations with observed data for all three sections, estimates of the induced and propagated fractures' radius and aperture at successive time stages have been obtained in each case. We could also determine the non-linear relationship between fracture aperture and pressure for values above fracture opening pressures. The model results provide insights for the understanding of pressure-induced fracture initiation and propagation in crystalline rock.

58 GEOSCIENCES↗
DOE OSTI2021

Viscous Behavior of Clay‐Rich Rocks and Its Role in Focused Fluid Flow

Abstract Focused fluid flow is common in sedimentary basins worldwide, where flow structures often penetrate through sandy reservoir rocks, and clay‐rich caprocks. To better understand the mechanisms forming such structures, the impacts of the viscoelastic deformation and strongly nonlinear porosity‐dependent permeability of clay‐rich materials are assessed from an experimental and numerical modeling perspective. The experimental methods to measure the poroviscoelastic and transport properties of intact and remolded shale have been developed, and the experimental data is used to constrain the numerical simulations. It is demonstrated that viscoelastic deformation combined with nonlinear porosity‐dependent permeability triggers the development of localized flow channels, often imaged as seismic chimneys. The permeability inside a channel increases by several orders of magnitude compared to the background values. In addition, the propagation time scale and the channel size strongly depend on the material properties of the fluid and the rock. The time‐dependent behavior of the clay‐rich rock may play a key role in the long‐term integrity of the subsurface formations.

58 GEOSCIENCES↗
DOE OSTI2021

Permeability Evolution of Fractures in Shale in the Presence of Supercritical CO 2

We experimentally examined the impact of supercritical carbon dioxide (scCO 2 ) on fracture permeability and fracture surface characteristics in shales of various compositions. We measured permeability and fracture normal displacement at different effective stresses using both argon and scCO 2 as pore fluids. Both natural fractures and saw cuts in intact samples were used in our study. The permeability and fracture normal displacement decrease after multiple loading/unloading cycles, apparently as the result of inelastic compaction. In samples with high carbonate content, we observe an increase in permeability and fracture surface degradation after more than 3.5 days of exposure to scCO 2 , apparently due to carbonate dissolution. We demonstrate that the sensitivity of permeability to effective normal stress correlates well with the fracture normal displacement. The dependence of permeability on effective normal stress increases after exposure to scCO 2 as the fracture surface became more compliant.

58 GEOSCIENCES↗
DOE OSTI2024

Electrical Resistivity Changes During Heating Experiments Unravel Heterogeneous Thermal‐Hydrological‐Mechanical Processes in Salt Formations

Abstract Rock salt is considered a suitable medium for the permanent disposal of heat‐generating radioactive waste due to its isolation properties. However, excavation damage and heating induce complex and heterogeneous thermal‐hydrological‐mechanical (THM) processes across different zones. Quantifying this heterogeneity is crucial for accurate long‐term performance assessment models, but traditional methods lack the necessary resolution. This study employs 4D electrical resistivity tomography (ERT) monitoring during controlled heating experiments in a salt formation to unravel the spatiotemporal dynamics of THM processes. Advanced time‐lapse inversion and clustering analysis quantify subsurface properties and map the heterogeneity of THM dynamics. The ERT results can estimate subsurface properties and delineate the damaged and intact zones, enabling appropriate parameterization and representation of processes for long‐term modeling. This approach may be used in further improving the predictive models and ensuring the safe long‐term disposal of radioactive waste in rock salt.

58 GEOSCIENCES↗
DOE OSTI2025

Stormwater Storage and Retention Within an Urban Prairie Wetland Complex

Climate change is expected to increase the frequency and severity of flooding in the Great Lakes region. In many cities, flood-control infrastructure is insufficient to protect against future climate conditions. Consequently, there is increasing focus on stormwater storage provided by urban greenspace, such as wetlands and prairies, but the ecohydrological behavior of these ecosystems is not well understood when they are embedded within cities. To improve understanding of hydrological connectivity between urban areas and natural greenspaces, we deployed a sensor network in Gensburg Markham Prairie (GMP), a large intact prairie-wetland complex in south suburban Chicago. We used the resulting high-frequency time-series data to assess surface-subsurface hydrologic dynamics between upland and low-lying wetland areas, interactions between the prairie and surrounding environment, and stormwater storage provided by the prairie. Rapid infiltration within the prairie during and after storm events provides subsurface flow that stores considerable water, flattens storm hydrographs, and increases the wetland hydroperiod. Much of the stormwater input to GMP derives from the surrounding cityscape. Consequently, storage within the prairie-wetland system reduces and slows stormwater discharge to downstream urban communities. For a typical 5-year 24-hr storm with 10.9 cm of rain, GMP stores 77,100 m 3 , 64% greater than the estimated direct rainfall volume onto the prairie, yielding 30,000 m 3 of offsite stormwater storage. This improved understanding of ecohydrological dynamics in urban prairies and wetlands informs the design and implementation of green infrastructure to meet growing needs for stormwater management.

Rivera, Vivien Anne [Northwestern University, Evan↗
DOE OSTI2026

Early Solar Wind and Dynamo Magnetic Field Topology Predictions for (16) Psyche and Other Asteroids

Abstract Asteroid (16) Psyche is a metal‐rich body that might record an ancient coherent magnetization if some relict crust or mantle is preserved. Herein, we use magnetohydrodynamic simulations to predict (16) Psyche's field topology for several distinct pathways: (i) an early solar wind‐induced magnetization imparted after a larger body was impacted, forming the present‐day asteroid, (ii) a core dynamo magnetization imparted in an asteroid that is either presently largely intact or was a rubble pile, and (iii) magnetization in the turbulent solar nebula disk. For pathway (i) we find the field to be predominantly dipolar and spin axis‐aligned. For pathway (ii) we find the field to be either dipolar and spin axis‐misaligned, or highly multipolar. We also find that (iii) a field produced earlier before the solar nebula cleared, would be highly multipolar. In cases (i) and (ii) we also place constraints on the field strength. Simple detection of a magnetic field without constraining its topology and temporal variability would be insufficient to confirm a remanent source, due to the influence of the present‐day solar wind, electromagnetic induction, and (16) Psyche's high obliquity. For sufficiently strong fields however, the field topology and orientation may reveal key observable consequences of the nature and history of (16) Psyche. Our framework is also broadly applicable to the study of magnetic fields from other asteroids.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Rainforest-to-pasture conversion stimulates soil methanogenesis across the Brazilian Amazon

The Amazon rainforest is a biodiversity hotspot and large terrestrial carbon sink threatened by agricultural conversion. Rainforest-to-pasture conversion stimulates the release of methane, a potent greenhouse gas. The biotic methane cycle is driven by microorganisms; therefore, this study focused on active methane-cycling microorganisms and their functions across land-use types. We collected intact soil cores from three land use types (primary rainforest, pasture, and secondary rainforest) of two geographically distinct areas of the Brazilian Amazon (Santarém, Pará and Ariquemes, Rondônia) and performed DNA stable-isotope probing coupled with metagenomics to identify the active methanotrophs and methanogens. At both locations, we observed a significant change in the composition of the isotope-labeled methane-cycling microbial community across land use types, specifically an increase in the abundance and diversity of active methanogens in pastures. We conclude that a significant increase in the abundance and activity of methanogens in pasture soils could drive increased soil methane emissions. Furthermore, we found that secondary rainforests had decreased methanogenic activity similar to primary rainforests, and thus a potential to recover as methane sinks, making it conceivable for forest restoration to offset greenhouse gas emissions in the tropics. These findings are critical for informing land management practices and global tropical rainforest conservation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Structural basis for the second step of group II intron splicing

The group II intron and the spliceosome share a common active site architecture and are thought to be evolutionarily related. Here we report the 3.7 Å crystal structure of a eukaryotic group II intron in the lariat-3' exon form, immediately preceding the second step of splicing, analogous to the spliceosomal P complex. This structure reveals the location of the intact 3' splice site within the catalytic core of the group II intron. The 3'-OH of the 5' exon is positioned in close proximity to the 3' splice site for nucleophilic attack and exon ligation. The active site undergoes conformational rearrangements with the catalytic triplex having different configurations before and after the second step of splicing. We describe a complete model for the second step of group II intron splicing that incorporates a dynamic catalytic triplex being responsible for creating the binding pocket for 3' splice site capture.

59 BASIC BIOLOGICAL SCIENCES↗