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At least 541 records · Page 30

Microgreens Root Zone/Shoot Zone Partitioned Planting Box

To enable sustainable food production in future human exploration missions, plant growth is being studied by the Space Crop Production Team at KSC. Microgreens are good candidates for food supplements and contain specific nutrients that are lacking in the prepackaged diet, including vitamin C and vitamin K. Because they are densely sown, typical growth methods do not allow the ability to distinguish between the levels of evaporation from the rooting substrate and transpiration from the leaves. With larger plants, the root and shoot zone can be separated to distinguish these fluxes and accurate transpiration measurements of plant canopies are feasible. Furthermore, separation of the root and shoot zone may also be beneficial when harvesting microgreens in microgravity as it may reduce microbial contamination of the edible biomass by the roots, which have high microbial loads. Using a root and shoot separator box when harvesting may help with microbial contamination, but these tiny plants are challenging to handle in microgravity, so harvest management remains an open question. The innovation proposed here is a microgreen root/shoot partitioned planting box, which offers a solution to these challenges with accurate gas exchange measurements and a safe microgreen harvest in low gravity environments. Being able to measure transpiration of a microgreen canopy will be important for modeling plant growth in reduced gravity environments, so the first objective was to develop a planting unit with a seal between the root zone and the shoot zone. With an unsuitable harvesting technique, freshly harvested microgreens may add debris to the cabin, so the second objective was to test different harvesting techniques and management approaches associated with this innovation. These two objectives were pursued in parallel since many goals were the same: develop a planting unit that 1) separates the shoots from the roots, 2) allows acceptable germination rate, and 3) allows for seedlings to emerge and develop. What differed was the need to have a seal, which was only applicable for our gas exchange goal, and the need to have an embedded harvesting mechanism and bagging method which only applied to our harvesting goal. Testing of the various harvesting mechanisms and bagging methods was performed during a series of parabolic flights. All parabolic flight procedures took place inside a rented secondary containment chamber (e.g., glovebox) that was developed by the University of Louisville specifically for experiments involving fluids and other materials that may become airborne during reduced gravity flight. Three different harvesting methods and two different bagging collection methods were tested for microgreens. A third bagging method was initially tested but found to be unsuitable. Human factors were also taken into consideration, to identify which harvest and bagging collection methods would be easiest to use with favorable results in microgravity. Three parabolic flight tests were performed in total, one in November 2021 and two in December 2021.

Gioia Massa↗

Exposure of Plant Seeds to the Space Environment Outside the International Space Station

Crop seeds may prove to be a vital component of future long-term spaceflight missions, and the impacts of extended exposure on seed degradation is not well understood. The MISSE-Seed project was designed to investigate the effects of space exposure on seed quality and storage. The project also served as a test of biological materials aboard the Materials International Space Station Experiment (MISSE) platform, and evaluated the capability of a newly designed passive sample containment vessel for the provision of acceptable storage conditions for seed and other biological samples to be preserved upon exposure to the space environment outside the ISS. MISSE-Seed was launched to the ISS on NG-15 in July of 2021 and returned to Earth aboard SpX-24 after approximately 8 months of exposure to the space environment. The specimens consisted of eleven seed varieties (Lettuce, Scarlet Frills, Amara, Garnet Giant, Pac Choi, Radish, Mizuna, Tomato, Cauliflower, Pepper, and Arabidopsis). Data-loggers and thermoluminescent dosimeters (TLDs) were included in each container to record environmental data. Temperature profiles and radiation/UV exposure data were also provided by Aegis Aerospace, the MISSE Implementation Partner. Hardware and experimental design, environmental profiles, and post-flight germination and growth results will be presented.

Alexander D Meyers↗

Rapid Composting of Crop Space Waste

This project processed multiple types of waste simulant feedstocks using commercial composting units and NASA Trash-to-Gas (TtG) technology processing units to see what solids, liquids, and gases could be recovered. The feedstock waste included inedible biomass, mission waste from the Johnson Space Center (JSC) Crew Health and Performance Exploration Analog (CHAPEA), Mars analog, and the long duration Orbital Syngas/Commodity Augmentation Reactor (OSCAR) Waste Simulant (OWS) and OSCAR Full Scale (FS) (also referred to as Mars 850-day mission waste simulant). The performance data was collected, and overall performance of the waste processing systems, as well as elemental analysis of the product yields for enabling Lunar and Martian regolith mixtures in a crop grow-out study, were performed. Germination took place in certain Lunar and Martian regolith studies, with promising preliminary results that TtG solid products can be used as plant nutrients to enable crop growth in off-world regolith simulants.

Anne Meier↗

VEG-05 Tomato Crop Testing on the International Space Station

Production of fresh, nutritious, and tasty produce for astronauts during spaceflight may provide health-promoting, bioavailable nutrients, enhance the dietary experience, and reduce menu fatigue as we move into longer-duration missions. Growing and caring for plants may also reduce the psychological stresses associated with spaceflight and enhance connection to Earth. A diversity of crops will be required to provide nutrition, variety, and resiliency, however requirements for consistent growth under spaceflight environmental conditions remain unclear. VEG-05 is part of a series of experiments with pick-and-eat salad crops to better define best practices for crop production in space. VEG-05 and predecessor experiments VEG-04A and VEG-04B, grew salad crops in the Veggie vegetable production facilities on the International Space Station using different lighting treatments. In VEG-05 we grew ‘Red Robin’ dwarf cherry tomatoes under two different red: blue lighting spectra. Light can impact the growth habit, yield, nutritional composition, microbial levels, and even flavor attributes within crops, and our goal was to assess these characteristics in ‘Red Robin’ tomatoes during VEG-05. Considerable pre-flight verification testing was performed prior to launch in Nov. 2022. Prior to the flight and ground experiments, lighting in both Veggie units on ISS was measured and lights were standardized between flight and ground hardware. VEG-05 flight operations ran between December 2022 and March 2023, with a ground control initially 48 hours delayed. Due to environmental challenges of very low humidity during the first week of the experiment, seed germination was low for both flight and ground plants. The flight experiment ultimately had 4 - 5 plants per treatment out of the planned 6 plants, but the initial ground control had only three plants in one treatment and none in the other, so this ground control was restarted at the beginning of Feb. 2023 and ran through May, with successful growth of all 12 plants. Both flight and ground control ran 100 days, with harvests of fruit at day 83, day 90, and day 100. Flight plants had uneven growth, and following the early drying events, excess water was frequently observed, which led to a variety of plant stress responses including uneven plant growth, excess adventitious root formation, flower and fruit abortion, and visible microbial growth. In total, from the five surviving red-rich lighted plants, only 5 ripe fruit were produced, and from the four surviving blue-rich lighted plants, 10 fruit were produced with only 6 of these ripe by day 100. Because of the small fruit number and the unsatisfactory growth, crew members were not allowed to consume the tomatoes, and all fruit, as well as large branches with leaves, samples of the adventitious roots, two plant rooting pillows from each treatment, microbial sampling swabs, and some water samples were returned for analysis. Because of the small sample sizes and factors affecting growth on the ISS, objectives of assessing light quality effect (red: blue light treatments) will not be achieved. Revised objectives of this study include to compare stressed flight plants with normal ground plants to determine the impact of plant overwatering stress in space on food safety and the plant microbial community, to determine nutrient content changes in fruit and leaves from stressed plants, and to evaluate stress metabolism changes in returned tissue by transcriptomic analysis. Postflight analysis is underway with the following analyses being conducted: A. culturable microbiology and food safety as well as molecular microbial community analysis of 1. ripe fruit, 2. leaves, stems, and adventitious roots, 3. pillow components (roots, wicks, and substrates), 4. swabs, and 5. water samples from root mats before and after growth. B. transcriptomics of leaf tissue and adventitious roots, and C. elemental analysis of leaf tissue. If sufficient tissue remains elemental analyses will also be conducted on fruit. While not generating the desired information on spaceflight growth responses of healthy crops, our team is hopeful that these analyses will shed light on tomato responses to stress in this environment as plant overwatering stress is a mission-relevant condition that could occur in future space crop growth systems. This research was co-funded by the Human Research Program and Space Biology (MTL#1075) in the ILSRA 2015 NRA call.

Gioia D. Massa↗

Impact of Space Radiation with Other Combined Space Environmental Factors on Plant Seeds and Plant Development: from Arabidopsis thaliana to Crops

One of the major concerns for long-term exploration missions beyond Earth’s magnetosphere is radiation risk, primarily from solar particle events (SPE) and galactic cosmic rays (GCR). With the goal of manned Mars exploration, the production of fresh food during long-duration space missions provides critical nutritional supplementation and may also benefit astronauts’ behavioral health. However, the effects of space radiation on plants and plant propagules have not been sufficiently investigated and characterized. To evaluate the effects of space radiation on plant seeds and development, we explored several platforms, including ground-based radiation facilities, the MISSE platform outside the ISS, and other Low Earth Obit (LEO) opportunities. Radiation particle types ranged from neutrons, single charged particles, simulated galactic cosmic rays, simulated solar particle events, the radiation field outside the ISS (total 10 months on the ISS), and the field inside a LEO vehicle (over 3 years). Radiation doses ranged from around 10 cGy to 80 cGy with acute or chronic exposures. In these studies up to 15 types of model plant and crop seeds were evaluated. In addition, tests were conducted to determine whether the combination of radiation exposure and simulated microgravity could have synergetic effects. Exposure to space radiation at the levels tested had no significant impact on the germination rate in Arabidopsis and the seeds from multiple crop plants; however, radiation exposure alone or with other combined factors reduced the viability of some seed types. Overall, the changes within plants grown from irradiated seeds were dose- and ion quality- dependent, with heavier ions causing more severe damage. These changes ranged from cotyledon deformation, shortened root length, smaller seedling size, and other signs of stress, depending on the seed types. Radiation exposure also significantly altered transcriptomic profiles in seedlings grown from irradiated seeds. The impact of space radiation on seeds and plants potentially affects the ability of plants to adapt to other environmental stresses (e.g. microgravity, water stress, and hardware constraints) as well as susceptibility to plant diseases, which need to be furtherly investigated.

Y Zhang↗

BLV-2011 Workshop, September 22-24, 2011. Final Report

The 3rd International 3-days Workshop "Baryon and Lepton Number Violations: BLV-2011" took place at Gatlinburg, TN for September 22-24, 2011. Workshop was organized by the International Organizing Committee and had received advice from the International Program Advisory Committee (see Appendix 1). Workshop was co-chaired by Pavel Fileviez Perez (University of Wisconsin) for theory and Yuri Kamyshkov (University of Tennessee) for experiment and local organization. Workshop was supported and sponsored by the University of Tennessee, Indiana University, North Carolina State University together with TUNL, and by the HEP office of the Department of Energy. DOE financial support in this sponsoring grant was $8,000; that was 23% of the overall budget of the Workshop. Remaining 77% were provided by the sponsoring Universities. Workshop sponsors including DOE are shown on the Workshop webpage. There were 90 workshop participants with 52 from US and remaining from Bosnia/Herzegovina (1), Brazil (1), China (1), Columbia (1), France (1), Germany (10), Italy (9), Japan (4), Russian Federation (3), Slovenia (2), Spain (4), and Switzerland (1). Among Workshop participants there were 17 postdocs and young researchers and 11 graduate students. Total 67 talks and 14 posters were presented at Workshop during 3 days of sessions. Appendix 2 shows the list of talks and posters. Main topic of the Workshop was Baryon and Lepton number violation that has become a vital part of the current discussions of the physics beyond the Standard Model (SM), specifically in connection with understanding the nature of neutrinos, origin of matter in universe, as well as possible Grand Unification of matter and forces. The goal of the Workshop was to have a focused comprehensive discussion of the Baryon (B) and Lepton (L) number violating processes, and possible new physics combining violation of both, including (B-L) violation, as a probe of unification, baryo- and lepto-genesis, Left-Right symmetry restoration, matter-antimatter asymmetry, sterile matter, mirror matter, dark matter, low-scale gravity, etc. Related experimental observations to these physics aspects included searches for Majorana neutrinos (2βΟν decays), proton decays, neutron-antineutron oscillations, μe transitions, mirror and sterile matter transformations, and possible other new phenomena that can be seen at LHC and future colliders. Combination of theoretical and experimental discussions at the Workshop was most stimulating for germinating of new theoretical ideas and promoting new experimental efforts in particle physics. As one of new developments stemmed from this Workshop was an idea of performing new neutron-antineutron transformation search at the Project X accelerator to be built at Fermilab. BLV2011 Workshop website: http://www.phys.utk.edu/BLV2011/ contains all the talks delivered at this Workshop. Agenda of the Workshop can be found in Appendix 2 to this report. During the Workshop all presentation talks were available at the web in parallel with the talks. This made the discussions of the new ideas and results at the meeting more prompt and efficient. Previous Workshops on Baryon and Lepton Number Violation search in 2007 at LBL and 2009 at the University of Wisconsin were organized essentially by the same initiative group of people as this Workshop. We are observing increased interest in the community to this physics topic. Next BLV-2013 Workshop now at bi-annual basis is being organized at the Max Plank Institute at Heidelberg by Pavel Fileviez Perez.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Uses of thaxtomin and thaxtomin compositions as herbicides

There is a need for a selective, low-risk herbicide that can be used to control weeds in cereal cultures and turf. The present invention discloses that a bacterial secondary metabolite, thaxtomin and optionally another herbicide is an effective herbicide on broadleaved, sedge and grass weeds. Thaxtomin A and structurally similar compounds can be used as natural herbicides to control the germination and growth of weeds in cereal, turf grass, Timothy grass and pasture grass cultures with no phytotoxicity to these crops. As a natural, non-toxic compound, thaxtomin can be used as a safe alternative for weed control in both conventional and organic farming and gardening systems.

59 BASIC BIOLOGICAL SCIENCES↗

Portable Flux Tower Deployments Field Campaign Report

In May of 2015, a portable eddy covariance flux tower was installed by David Billesbach at the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) user facility’s Southern Great Plains (SGP) observatory E-32 extended facility west of Medford, Oklahoma. The goal of this deployment was to provide data sets that could be used to test land-atmosphere models and surface forcing from the SGP region. This site was chosen as being underrepresented in current data inventories. In January of 2016, a second portable flux system was installed (by Billesbach and Sebastien Biraud) in a field at the southeast corner of the intersection of Oklahoma highways 11 and 74 (also near Medford and designated as site 74). This site was chosen because it was to be planted in grain sorghum (milo) which is also an underrepresented crop. A secondary goal for this deployment was to refine the operational parameters of the newly rebuilt portable eddy correlation flux systems (ECOR), which incorporate several new sensors. These new measurements were designed to accommodate more advanced modeling and integration with remote-sensing products such as normalized difference vegetation index (NDVI), photochemical reflectance index (PRI), and diffuse solar radiation. Another secondary goal was to assess how well surface energy components—sensible heat flux (H) and latent heat flux (LE)—measured by ECOR and energy balance Bowen ratio (EBBR) instruments could be compared. Operations were terminated at the E-32 site in June of 2017 and Billesbach removed the equipment from the site. Operations at site 74 were terminated in October of 2017 and Billesbach (with assistance from SGP-Central Facility personnel) again removed the equipment from the field. The most notable event at the E-32 site was the retrenching of site power. This operation opened a wide gap in the normally grass-covered footprint of our optical sensors. We are still evaluating the effects that the bare soil had on our NDVI and PRI data. At site 74, we learned after germination that soy beans instead of grain sorghum had been planted for the second (2017) growing season.

energy balance Bowen ratio station, eddy correlati↗

Ambient monitoring to inform the protection of beneficial uses and achieve water quality goals in Sinclair and Dyes Inlets, Puget Sound, WA

Currently discharge limits enforced under the Clean Water Act are focused on meeting water quality standards at the end of the pipe and environmental performance is measured based on meeting the discharge limits; but meeting discharge limits has very little to do with achieving water quality goals for coastal and estuarine ecosystems. Therefore, an effective monitoring and assessment program is needed to assess continuous process improvement, evaluate the ecological conditions, and provide metrics that can inform effective management of coastal and estuarine water quality. As part of an integrated Environmental Investment (ENVVEST) project for Sinclair and Dyes Inlets (ENVVEST 2006; Johnston et al. 2009) a network of monitoring stations was established to characterize environmental conditions, assess potential impacts, and establish environmental quality trends within the Inlets. Water, sediment, and biota monitoring locations were selected that were co-located near suspected sources (industrial, waste water, and stormwater outfalls; marinas, stream mouths, and other sources) or were representative of ambient marine and nearshore conditions. Water column stations and effluents from industrial outfalls were sampled seasonally for trace metals (Cd, Cr, Cu, Hg, Pb, and Zn) using analytical procedures appropriate for seawater (Strivens, Brandenberger and Johnston, 2018), conventional parameters (salinity, dissolved and total organic carbon, total and suspended solids, dissolved O2, pH, turbidity, NO2+NO3, NH4, N, and P), and toxicity. Effluent and water column toxicity tests included mysid shrimp (Americamysis bahia) 96 hr survival, sand dollar (Dendraster excentricus) or purple sea urchin (Strongylocentrotus purpuratus) 96 hr embryo development, QwikLite – dinoflagellate (Pyrocystis lunula) 24 hr bioluminescence response, mussel larvae (Mytilus sp.) 48 hr larvae survival and development, and kelp (Macrocystis pyrifera) 48 hr growth and germination. Additionally, indigenous mussels (Mytilis spp.) were sampled biennially for contaminant residues of metals, polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), lipid content, and stable isotopes of C and N. The mussel data were compared to benchmarks of ecological effects (Johnston et al. 2007, Applied Biomonitoring 2009), samples obtained from a local seafood market harvested from Penn Cove on Whidbey Island (PKPLPC), and data from the national mussel watch status and trends monitoring program (Kimbrough et al. 2008). Results from 2009-2016 showed that dissolved metals nearly always met water quality standards and that water quality in Navy nearshore areas appeared to improve after best management practices (BMPs) for industrial process improvements (US Navy 2012) were completed in Sept. 2013 (Figure 1). In general, toxicity from exposure to whole effluent samples was not observed and ambient water samples were not toxic to test organisms, except that ambient toxicity was only observed during the presence of algal blooms which showed that toxicity was highly correlated with the abundance of the toxic algae Gymnodinium splendens (Rosen et al. 2009). Overall, mussel tissue residues were below benchmarks at most locations (Figure 2), however there were locations that had elevated levels of PAHs, PCBs, Hg, and Cu. Results from the monitoring provide metrics that are being used to assess progress toward meeting environmental quality goals for the watershed.

ENVVEST, PSEMP↗

Assessment of SFR fuel pin performance codes under advanced fuel for minor actinide transmutation

Americium is a strong contributor to the long term radiotoxicity of high activity nuclear waste. Transmutation by irradiation in nuclear reactors of long-lived nuclides like {sup 241}Am is, therefore, an option for the reduction of radiotoxicity and residual power packages as well as the repository area. In the SUPERFACT Experiment four different oxide fuels containing high and low concentrations of {sup 237}Np and {sup 241}Am, representing the homogeneous and heterogeneous in-pile recycling concepts, were irradiated in the PHENIX reactor. The behavior of advanced fuel materials with minor actinide needs to be fully characterized, understood and modeled in order to optimize the design of this kind of fuel elements and to evaluate its performances. This paper assesses the current predictability of fuel performance codes TRANSURANUS and GERMINAL V2 on the basis of post irradiation examinations of the SUPERFACT experiment for pins with low minor actinide content. Their predictions have been compared to measured data in terms of geometrical changes of fuel and cladding, fission gases behavior and actinide and fission product distributions. The results are in good agreement with the experimental results, although improvements are also pointed out for further studies, especially if larger content of minor actinide will be taken into account in the codes. (authors)

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

An Overview of R and D on Retrievability and Retrieval Technology in Germany - 20462

Retrievability is a term that is included in most radioactive waste management programs around the world. Although national definitions vary, the overall understanding of retrievability concerns the ability to recover waste packages from the repository mine after their emplacement. Different countries may implement retrievability in very different ways, ranging from a built-in reversibility into the emplacement process to the stipulation that retrievability may in no way impede passive safety in the post-closure phase. Germany takes a middle course such that retrievability in a HLW repository (repository for high level radioactive waste) may have no significant detrimental effect on passive safety. In Germany, the current siting process considers rock salt, clay rock, and crystalline rock as potential host rocks. Therefore, Research and Development (R and D) has been investigating repository concepts and retrievability in all host rocks. After introduction of retrievability in 2010, existing repository concepts were modified to facilitate retrieval. The changes made comprised, for example, equipping boreholes with steel liners, developing new technologies, and modifying existing emplacement devices. Apart from retrieval of HLW, retrieval of other wastes from underground repositories that were designed and operated without retrievability in mind, poses major technical and scientific challenges. Currently, studies are under way to investigate the feasibility and costs of partial retrieval of waste from an underground repository for hazardous and highly toxic waste in France, Stocamine. With regard to retrieval, the rock-mechanical conditions are deteriorating rapidly, so time is of the essence. In the Asse II mine in Germany, about 126,500 waste casks with low and intermediate level waste await retrieval. The repository mine suffers from difficult rock-mechanical conditions and inflow of brine, locally into emplacement areas. The Federal Company for Radioactive Waste Disposal (BGE) is legally required to retrieve all wastes from the Asse. Due to the specific challenges, R and D is needed to develop technical solutions for the safe retrieval from each of the emplacement chambers. R and D on retrievability and retrieval technology does not only address challenges in radioactive or toxic waste retrieval but may also help to germinate innovation to better master complex underground situations in general, e.g. in deep mining, tunneling, or repository construction. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Study of the Wigner function at the device boundaries in one-dimensional single- and double-barrier structures

In this work, we compute the Wigner distribution function on one-dimensional devices from wave functions generated by solving the Schroedinger equation. Our goal is to investigate certain issues that we encountered in implementing Wigner transport equation solvers, such as the large discrepancies observed between the boundary conditions and the solution in the neighborhood of the boundaries. By evaluating the Wigner function without solving the Wigner transport equation, we intend to ensure that the actual boundary conditions are consistent with those commonly applied in literature. We study both single- and double-barrier unbiased structures. We use simple potential profiles, so that we can compute the wave functions analytically for better accuracy. We vary a number of structure geometry, material, meshing, and numerical parameters, among which are the contact length, the barrier height, the number of incident wave functions, and the numerical precision used for the computations, and we observe how the Wigner function at the device boundaries is affected. For the double-barrier structures, we look at the density matrix function and we study a model for the device transmission spectrum which helps explain the lobelike artifacts that we observe on the Wigner function.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Local-Ising-type magnetic order and metamagnetism in the rare-earth pyrogermanate Er 2 Ge 2 O 7

The recent discoveries of proximate quantum spin-liquid compounds and their potential application in quantum computing informs the search for new candidate materials for quantum spin-ice and spin-liquid physics. While the majority of such work has centered on members of the pyrochlore family due to their inherently frustrated linked tetrahedral structure, the rare-earth pyrogermanates also show promise for possible frustrated magnetic behavior. With the familiar stoichiometry R 2 Ge 2 O 7 , these compounds generally have tetragonal symmetry with a rare-earth sublattice built of a spiral of alternating edge and corner-sharing rare-earth site triangles. Studies on Dy 2 Ge 2 O 7 and Ho 2 Ge 2 O 7 have shown tunable low temperature antiferromagnetic order, a high frustration index, and spin-ice-like dynamics. Here we use neutron diffraction to study magnetic order in Er 2 Ge 2 O 7 (space group P4 1 2 1 2) and find the lowest yet Neél temperature in the pyrogermanates of 1.15 K. Using neutron powder diffraction, we find the magnetic structure to order with k=(0,0,0) ordering vector, magnetic space group symmetry P4' 1 2 1 2', and a refined Er moment of m=8.1μ B near the expected value for the Er 3+ free ion. Provocatively, the magnetic structure exhibits similar “local Ising” behavior to that seen in the pyrocholres where the Er moment points up or down along the short Er-Er bond. Upon applying a magnetic field, we find a first-order metamagnetic transition at ~0.35T to a lower symmetry P2' 1 2' 1 2 structure. This magnetic transition involves an inversion of Er moments aligned antiparallel to the applied field describing a class I spin-flip-type transition, indicating a strong local anisotropy at the Er site—reminiscent of that seen in the spin-ice pyrochlores.

36 MATERIALS SCIENCE↗

The seasonal climate niche predicts phenology and distribution of an ephemeral annual plant, Mollugo verticillata

Many short-lived species complete their life cycles during brief seasonal windows of favourable environmental conditions. Such species may persist in the face of climate warming by migration to track their seasonal climate niche in space and/or by phenological shifts to track favourable conditions in time within the year. To describe the seasonal climate niche of the short-lived annual Mollugo verticillata in California, we used data from herbarium specimens and historic climate records to estimate environmental conditions at the location, month and year of each collection. We used these data in a MaxEnt framework to construct a seasonal species distribution model (SDM) of the species’ climate niche within the total climate space available across all seasons and locations in California. The model provides fine-scale spatial and temporal predictions of habitat suitability, predicting both where and when the species should be observed. We compared the predictions of the model to those from a conventional SDM based on mean annual climate data. Both models showed that M. verticillata is limited to warm environments within California. However, the seasonal SDM also predicted phenology by mapping climate suitability across the state for each month of the year. Mollugo verticillata is limited to warm months, and its seasonal climate niche shifts in space across California in the course of the year. We used the seasonal SDM to map the predicted future species distribution for each month of the year under three warming scenarios. The species is predicted to expand its range and occur earlier in the year in most locations; in the warmest locations, seasonal suitability is predicted to decline in the warmest months, which may result in bimodal phenology with a mid-summer gap. Synthesis. We developed a novel species distribution model using herbarium records and monthly weather data, which predicts not only where a short-lived species should be found but also when during the year it is predicted to occur in those areas. Furthermore, this model can be used to predict how climate change will affect the species distribution in space as well as seasonal phenology across the landscape.

54 ENVIRONMENTAL SCIENCES↗

The Shade Avoidance Syndrome in Arabidopsis: The Antagonistic Role of Phytochrome A and B Differentiates Vegetation Proximity and Canopy Shade

Light limitation caused by dense vegetation is one of the greatest threats to plant survival in natural environments. Plants detect such neighboring vegetation as a reduction in the red to far-red ratio (R:FR) of the incoming light. The low R:FR signal, perceived by phytochromes, initiates a set of responses collectively known as the shade avoidance syndrome, intended to reduce the degree of current or future shade from neighbors by overtopping such competitors or inducing flowering to ensure seed production. At the seedling stage these responses include increased hypocotyl elongation. We have systematically analyzed the Arabidopsis seedling response and the contribution of phyA and phyB to perception of decreased R:FR, at three different levels of photosynthetically active radiation. Our results show that the shade avoidance syndrome, induced by phyB deactivation, is gradually antagonized by phyA, operating through the so-called FR-High Irradiance Response, in response to high FR levels in a range that simulates plant canopy shade. The data indicate that the R:FR signal distinguishes between the presence of proximal, but non-shading, neighbors and direct foliar shade, via a intrafamily photosensory attenuation mechanism that acts to suppress excessive reversion toward skotomorphogenic development under prolonged direct vegetation shade.

59 BASIC BIOLOGICAL SCIENCES↗

Data from: "Growth strategies and threshold responses to water deficit modulate effects of warming on tree seedlings from forest to alpine"

This data package contains data that were used to support conclusions drawn in “Growth strategies and threshold responses to water deficit modulate effects of warming on tree seedlings from forest to alpine”, by Lazarus, Castanha et al. 2017. Data were collected at field sites within the Alpine Treeline Warming Experiment (ATWE) on Niwot Ridge, Colorado, USA, and at the U.S. Geological Survey laboratory located in Boise, Idaho. This archive contains comma-separated-values (.csv) files, as well as the same files in Microsoft Excel (.xlsx) format, which can be opened by either Microsoft Excel, R, or any simple text editor program. There are two types of geospatial data files: .kml and ESRI shapefiles (.shp). The kml files contain placemarks, which can be opened by Google Earth, or Google Maps. The ESRI shapefiles can be opened by any geographic information system application that can read shapefiles, including ESRI's entire ArcGIS suite, and QGIS. We asked whether and how tree species differences in response to water deficit relates to their establishment along the gradient from forest to alpine. To do this, we compared growth and moisture stress responses in first-year seedlings of three species planted in common gardens subject to a factorial of heating and watering treatments below, at, and above tree line. This combination of an elevation gradient alongside warming and watering treatments enabled us to observe species differences in seedling responses to a broad set of climatic conditions.Entire seedlings were harvested at c. 3- and again at 9 weeks of age following germination/emergence in the experimental plots, and we then measured dry mass (DM) of above and belowground parts, root length, root mass fraction (RMF), relative growth rates (RGRs) from seed to 3 weeks and from 3 to 9 weeks, turgor-loss point (TLP), and photosynthetic WUE (as δ13C). Also included in this dataset (but not described in the manuscript) are measures of specific leaf area (SLA) and other variables generated by pressure-volume curves (saturated water content, osmotic potential at full turgor, elastic modulus).

54 ENVIRONMENTAL SCIENCES↗

Data from: "Warming and provenance limit tree recruitment across and beyond the elevation range of subalpine forest"

This data package contains data used to support conclusions drawn in “Warming and provenance limit tree recruitment across and beyond the elevation range of subalpine forest”, by Kueppers et al. 2017. Data were collected in field sites within the Alpine Treeline Warming Experiment (ATWE), located on Niwot Ridge, on the eastern slope of the Colorado Rocky Mountains, USA. Files containing geospatial data are also included, to provide additional locational context.There are four document formats associated with this archive: three comma-separated values (.csv) files, three Microsoft Excel (.xlsx) files, one .pdf data user’s guide, four keyhole markup language (.kml) files, and a compressed folder containing seven ESRI shapefiles (.shp). The .csv files can be opened using any simple text-editor software, R, or Microsoft Excel. The .xlsx files can only be opened using Microsoft Excel. The .kml file can be opened by Google Earth and Google Maps, and the shapefiles can be opened with any GIS application compatible with the file type, such as ESRI’s ArcGIS, and QGIS.We provide two versions of the seedling data file: “PIEN_PIFLseedlings20150522_20150525rev12222020.csv/.xlsx” (hereafter PIEN_PIFLseedlings2015) and “PIEN_PIFLseedlings20160408rev12222020.csv/.xlsx” (hereafter PIEN_PIFLseedlings2016). PIEN_PIFLseedlings2015 contains the data we used in the paper. PIEN_PIFLseedlings2016 contains an updated version of these data that includes sampling from later years. The main differences between the two files lie in the columns titled “k[YEAR],” which describe the number of seedlings that were killed in a particular year. In PIEN_PIFLseedlings2016, there also is an additional year of data for k2015, and k2014 also has additional data input for the 2014 cohort. Additionally, in years 2010-2014, there are minor differences in the number of seedlings killed -- in as few as 0 plots (in 2011) to as many as 5 plots (in 2014) -- due to errors in data input that were rectified in later years.------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Upslope range shifts by subalpine tree species are a widely anticipated effect of climate change. Climate niche models predict subalpine forests to expand upslope, given more suitable growing conditions for adult trees. However, these models do not take into account climates required for successful seedling recruitment and establishment, an essential element for expansion. Further, localized upper treeline populations are hypothesized to contain favorable traits for colonizing the alpine. To test these expectations and to expand our knowledge of seedling recruitment under climate change, we designed a common garden, climate-warming experiment spread across an elevation gradient at Niwot Ridge in the Colorado Rocky Mountains. We focus on two widespread Western North American species, Engelmann spruce (Picea engelmannii Parry ex. Engelm) and limber pine (Pinus flexilis James), which occur at treeline. While the former is considered a late-seral species more tolerant of shade, limber pine is a shade-intolerant pioneer species able to establish on infertile sites.Every autumn, seeds of the two species were collected from high- (3370 m–3570 m) and low-provenance (2910–3240 m) sources close to the experimental sites and sown in our plots. A subset of plots were heated and another subset watered over the summer months to offset the effects of warming. Across five years, we found that seeds originating from low elevation recruited more strongly for both species, although this provenance difference diminished by the fourth year for Engelmann spruce, likely due to small sample sizes. Despite the recruitment of low-provenance seed, warming treatments decreased recruitment at all elevations. Combining this with the likeliness and availability of lower-quality, high provenance seed moving upslope at the treeline, tree migration into the alpine may be slowed. Overall, our findings suggest that the hardier limber pine is likely to become a more significant species in subalpine forest communities in the future, while the more sensitive Engelmann spruce may experience range contraction.

54 ENVIRONMENTAL SCIENCES↗