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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 541 records · Page 30
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Discovering Innovations in Stress Tolerance through Comparative Gene Regulatory Network Analysis and Cell-Type Specific Expression Maps (Final Technical Report with Cover Page)

Through this grant, we developed a comparative framework to elucidate the mechanisms behind variations in environmental stress responses among a diverse group of species within the Brassicaceae family. Our focus was on the differences in physiological and transcriptomic responses to abscisic acid (ABA), a hormone associated with water stress. We examined the differential growth responses of four Brassicaceae species, finding that most exhibited reduced root growth correlated with smaller meristem size. In contrast, Schrenkiella parvula showed accelerated growth due to increased root cell elongation. We employed RNA sequencing to analyze the transcriptional responses to ABA across these species, and innovative bioinformatics techniques were used to pinpoint biological pathways with significant divergence. Additionally, we utilized DAP-seq to map the gene regulatory networks associated with ABAresponsive transcription factors, revealing that variations in the regulation of growth hormone biosynthesis play a critical role in the distinct ABA effects on root growth among the species. This research sets a new standard for comparative physiology by integrating comparative genomics and transcriptomics to uncover pathway divergences.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Combining genome-wide association studies and expression quantitative trait nucleotide mapping with molecular and genetic validations to identify transcriptional networks regulating drought tolerance in Populus

Objectives: (i). To deploy a large-scale experimental drought trial for up to 1000 unique genotypes of Populus equipping the sites with controlled irrigation and drought treatments that are fully automated and monitored. FULLY COMPLETED (ii) To test the hypothesis that a suite of traits identified for drought tolerance in P. nigra can be measured in drought and control treatments in the wide germplasm collection of P. trichocarpa. FULLY COMPLETED (iii) To use established and novel GWAS model approaches to identify gene loci linked to drought tolerance traits on interest in P. trichocarpa. FULLY COMPLETED (iv) To undertake comparative analysis of GWAS results for drought tolerance traits in P. nigra and P. trichocarpa. PARTIALLY COMPLETED – remains active (v) Using RNAseq in P. trichocarpa, in droughted and control treatments to identify cis- and trans-regulated eQTN. FULLY COMPLETED (vi) Validate up to 50 cis-QTNs, from network hubs using transient protoplast assays. FULLY COMPLETED (vii) To establish Agrobacterium-based gene editing protocols in Populus. FULLY COMPLETED (viii) To utilize early leads from previous research to investigate at least 6 candidate genes for drought tolerance in Populus. FULLY COMPLETED (ix) To validate up to 20 candidate genes for drought tolerance in P. trichocarpa refined from the long-list tested in the transient assays for cis-acting hub gene targets. PARTIALLY COMPLETED- remains active.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Arctic Impact Identification with Less Data Using Variable Relationships: An Exploratory Express LDRD project.

Regional impacts from sea ice loss can be challenging to separate from internal climate variability, potentially requiring thousands of ensemble members. East Asian wintertime cooling has been linked to sea ice loss from present day conditions in the Polar Amplification Model Intercomparison Project with these large ensemble counts. This cooling is theorized to arise from a strengthened Siberian High and East Asian Jet response. The strengthened Siberian High can be detected with one fifth the ensemble members needed for the East Asian wintertime cooling in a single model. We thus hypothesize that leveraging relationships between multiple variables in a conditional pathways-based approach would reduce the number of required ensemble members to conclusively attribute East Asian wintertime cooling to future sea ice concentrations. In all analyzed cases, confidence was increased when evaluating sea ice loss’s responsibility for the joint effects of East Asian cooling, East Asian Jet strengthening, and Siberian High strengthening over just East Asian cooling. However, we were not able to confidently attribute future East Asian wintertime cooling to sea ice loss in a single model. We found that significant intra-ensemble variability within single Earth System Models (ESMs) produced highly uncertain forcing response models upon which attribution results were undermined. We were able to show that ensemble mean seasonally averaged metrics from multiple ESMs greatly improved the accuracy of the forcing response linear models and exposed the necessity of all three steps in the pathway (sea ice area, Siberian High pressure, and East Asian Jet speed) for accurate prediction of East Asian wintertime cooling. Although all three steps were necessary, East Asian wintertime cooling possesses a large dependence on the Siberian High pressure, which weakens the confidence associated with overall strong joint-attribution comparing present day and future scenarios. We believe transitioning the pathway nodes to relative changes between the Siberian High and Aleutian Low as well as between the midlatitude westerlies and subtropical jet in the East Asianj Jet region may be able to produce significant attribution more fully dependent upon all three steps. Ultimately, this research demonstrates the simple extensibility of conditional pathways-based attribution to sea ice loss forcing on the Earth system.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Analytic Expressions for Extracting Far Scrape-Off Layer Transport Coefficients from the Plasma-Wall Interaction of Divertor Tokamaks

Magnetic-confinement DT pilot plants and DEMO-class devices will employ thin breeding blanket first walls with substantially lower steady-state power-handling margins than ITER-like thick walls, making reliable prediction of main-chamber particle and heat loads increasingly critical. This report addresses that need by developing analytic tools to interpret far scrape-off layer (far-SOL) plasma–wall interaction measurements in divertor tokamaks, with the goal of extracting effective cross-field transport coefficients from “window-frame” experiments and related diagnostics.

Stangeby, P. C. [Univ. of Toronto, ON (Canada)]↗
DOE OSTI2022

Overview of Diverse Methyl/Alkyl-Coenzyme M Reductases and Considerations for Their Potential Heterologous Expression

Methyl-coenzyme M reductase (MCR) is an archaeal enzyme that catalyzes the final step of methanogenesis and the first step in the anaerobic oxidation of methane, the energy metabolisms of methanogens and anaerobic methanotrophs (ANME), respectively. Variants of MCR, known as alkyl-coenzyme M reductases, are involved in the anaerobic oxidation of short-chain alkanes including ethane, propane, and butane as well as the catabolism of long-chain alkanes from oil reservoirs. MCR is a dimer of heterotrimers (encoded by mcrABG) and requires the nickel-containing tetrapyrrole prosthetic group known as coenzyme F430. MCR houses a series of unusual post-translational modifications within its active site whose identities vary depending on the organism and whose functions remain unclear. Methanogenic MCRs are encoded in a highly conserved mcrBDCGA gene cluster, which encodes two accessory proteins, McrD and McrC, that are believed to be involved in the assembly and activation of MCR, respectively. The requirement of a unique and complex coenzyme, various unusual post-translational modifications, and many remaining questions surrounding assembly and activation of MCR largely limit in vitro experiments to native enzymes with recombinant methods only recently appearing. Production of MCRs in a heterologous host is an important step toward developing optimized biocatalytic systems for methane production as well as for bioconversion of methane and other alkanes into value-added compounds. This review will first summarize MCR catalysis and structure, followed by a discussion of advances and challenges related to the production of diverse MCRs in a heterologous host.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Zika Virus Infection and Antibody Neutralization in FcRn Expressing Placenta and Engineered Cell Lines

As a developmental toxicant, Zika virus (ZIKV) attacks both the growing nervous system, causing congenital Zika syndrome, and the placenta, resulting in pathological changes and associated adverse fetal outcomes. There are no vaccines, antibodies, or other treatments for ZIKV, despite the potential for its re-emergence. Multiple studies have highlighted the risk of antibodies for enhancing ZIKV infection, including during pregnancy, but the mechanisms for such effects are not fully understood. We have focused on the ability of the neonatal Fc receptor (FcRn) to interact with ZIKV in the presence and absence of relevant antibodies. We found that ZIKV replication was higher in Marvin Darby Canine Kidney (MDCK) cells that overexpress FcRn compared to those that do not, and knocking down FcRn decreased ZIKV RNA production. In the placenta trophoblast BeWo cell line, ZIKV infection itself downregulated FcRn at the mRNA and protein levels. Addition of anti-ZIKV antibodies to MDCK/FcRn cells resulted in non-monotonous neutralization curves with neutralization attenuation and even enhancement of infection at higher concentrations. Non-monotonous neutralization was also seen in BeWo cells at intermediate antibody concentrations. Our studies highlight the underappreciated role FcRn plays in ZIKV infection and may have implications for anti-ZIKV prophylaxis and therapy in pregnant women.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Early Holocene cold snaps and their expression in the moraine record of the eastern European Alps

Glaciers preserve climate variations in their geological and geomorphological records, which makes them prime candidates for climate reconstructions. Investigating the glacier–climate system over the past millennia is particularly relevant first because the amplitude and frequency of natural climate variability during the Holocene provides the climatic context against which modern, human-induced climate change must be assessed. Second, the transition from the last glacial to the current interglacial promises important insights into the climate system during warming, which is of particular interest with respect to ongoing climate change. Evidence of stable ice margin positions that record cooling during the past 12 kyr are preserved in two glaciated valleys of the Silvretta Massif in the eastern European Alps, the Jamtal (JAM) and the Laraintal (LAR). We mapped and dated moraines in these catchments including historical ridges using beryllium-10 surface exposure dating (10Be SED) techniques and correlate resulting moraine formation intervals with climate proxy records to evaluate the spatial and temporal scale of these cold phases. The new geochronologies indicate the formation of moraines during the early Holocene (EH), ca. 11.0 ± 0.7 ka (n = 19). Boulder ages along historical moraines (n = 6) suggest at least two glacier advances during the Little Ice Age (LIA; ca. 1250–1850 CE) around 1300 CE and in the second half of the 18th century. An earlier advance to the same position may have occurred around 500 CE. The Jamtal and Laraintal moraine chronologies provide evidence that millennial-scale EH warming was superimposed by centennial-scale cooling. The timing of EH moraine formation coincides with brief temperature drops identified in local and regional paleoproxy records, most prominently with the Preboreal Oscillation (PBO) and is consistent with moraine deposition in other catchments in the European Alps and in the Arctic region. This consistency points to cooling beyond the local scale and therefore a regional or even hemispheric climate driver. Freshwater input sourced from the Laurentide Ice Sheet (LIS), which changed circulation patterns in the North Atlantic, is a plausible explanation for EH cooling and moraine formation in the Nordic region and in Europe.

54 ENVIRONMENTAL SCIENCES↗