Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “structural modeling”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 55 records · Page 3
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Structural Models and Sequence Alignment Results of the Desulfovibrio vulgaris Proteome

This dataset contains the structural models for the primary transcripts of the Desulfovibrio vulgaris proteome as well as sequence alignment results for a subset of the encoded proteins. For each protein, the five models inferred from AlphaFold 2 are provided. The largest pTM-scoring model for each protein was energy minimized; this minimized structure as well as its AlphaFold pickle output file are also provided. This set of structures represent an alternate source of models for the D. vulgaris proteome to those available in the AlphaFold Protein Structure Database (AFDB). This is a bit more complicated since the proteins reporting in the AFDB originate from an outdated form of the D. vulgaris sequence. The different versions of the D. vulgaris gene annotation are collected in the Chronology subdirectory; further consideration of these changes on the structural space of the proteome are currently underway. For proteins that have been annotated as hypothetical, sequence alignment results from the HHblits and SAdLSA alignment methods are provided. These methods are often more capable to resolve sequence homology than other methods. Therefore, the results from both HHblits and SAdLSA are provided to identify possible homologs for these challenging proteins. Numerous sequence databases are utilized for these alignments. References AlphaFold v2 Multimer: https://doi.org/10.1101/2021.10.04.463034. References HHblits: hhtps://doi.org/10.1186/s12859-019-3019-7. References SAdLSA: hhtps://doi.org/10.3389/fbinf.2021.689960.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1982

Structural modeling of high Reynolds number wind tunnel models

A solid uninstrumented wing and a pressure instrumented wing having a tongue and groove type joint have been structurally modeled by using SPAR Structural Analysis System. The solid wing model can be analyzed by SPAR, using either solid elements or plate elements with reasonable accuracy. The instrumented wing models with tongue and groove joint can be modeled by using solid elements. A solid model representation for the wing with tongue and groove joint can be used for the cases where an error of 6 percent in deflections is acceptable.

Mehrotra, S. C.↗
NASA NTRS2019

Aero-Structural Modeling of the Truss-Braced Wing Aircraft Using Potential Method with Correction Methods for Transonic Viscous Flow and Wing-Strut Interference Aerodynamics

This paper describes an aero-structural modeling method for the Transonic Truss-Braced Wing (TTBW) aircraft using VSPAERO. A vortex-lattice model of the TTBW aircraft is developed, and a transonic and viscous flow correction method is implemented in the VSPAERO models to account for transonic and viscous flow effects. A correction method for the wing-strut interference aerodynamics is developed and applied to the VSPAERO solver. Also, a structural dynamic finite-element model of the TTBW aircraft is developed. This finite-element model includes the geometric nonlinear effect due to the tension in the struts which cause a deflection dependent nonlinear stiffness. The VSPAERO models are coupled to the finite-element model to provide a rapid capability for aero-structural modeling and flutter analysis. A flight-optimized jig twist model is being developed and will be applied for the purpose of generating a full flight dynamic model of the TTBW aircraft.

Fugate, Jason↗
NASA NTRS2014

Diagnosability-Based Sensor Placement through Structural Model Decomposition

Systems health management, and in particular fault diagnosis, is important for ensuring safe, correct, and efficient operation of complex engineering systems. The performance of an online health monitoring system depends critically on the available sensors of the system. However, the set of selected sensors is subject to many constraints, such as cost and weight, and hence, these sensors must be selected judiciously. This paper presents an offline design-time sensor placement approach for complex systems. Our diagnosis method is built upon the analysis of model-based residuals, which are computed using structural model decomposition. Sensor placement in this framework manifests as a residual selection problem, and we aim to find the set of residuals that achieves single-fault diagnosability of the system, uses the minimum number of sensors, and corresponds to the best model decomposition for the best distribution of the diagnosis system. We present a set of algorithms for solving this problem and compare their performance in terms of computational complexity and optimality of solutions. We demonstrate the approach using a benchmark multi-tank system.

Daigle, Matthew↗
DOE OSTI2024

Updated resources for exploring experimentally-determined PDB structures and Computed Structure Models at the RCSB Protein Data Bank

The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB, RCSB.org), the US Worldwide Protein Data Bank (wwPDB, wwPDB.org) data center for the global PDB archive, provides access to the PDB data via its RCSB.org research-focused web portal. We report substantial additions to the tools and visualization features available at RCSB.org, which now delivers more than 227000 experimentally determined atomic-level three-dimensional (3D) biostructures stored in the global PDB archive alongside more than 1 million Computed Structure Models (CSMs) of proteins (including models for human, model organisms, select human pathogens, crop plants and organisms important for addressing climate change). In addition to providing support for 3D structure motif searches with user-provided coordinates, new features highlighted herein include query results organized by redundancy-reduced Groups and summary pages that facilitate exploration of groups of similar proteins. Newly released programmatic tools are also described, as are enhanced training opportunities.

Burley, Stephen K.↗
NASA NTRS1980

Finite element structural model of a large, thin, completely free, flat plate

A finite element structural model of a 30.48 m x 30.48 m x 2.54 mm completely free aluminum plate is described and modal frequencies and mode shape data for the first 44 modes are presented. An explanation of the procedure for using the data is also presented. The model should prove useful for the investigation of controller design approaches for large flexible space structures.

Joshi, S. M.↗
NASA NTRS1988

SRM (Solid Rocket Motor) propellant and polymer materials structural modeling

The following investigation reviews and evaluates the use of stress relaxation test data for the structural analysis of Solid Rocket Motor (SRM) propellants and other polymer materials used for liners, insulators, inhibitors, and seals. The stress relaxation data is examined and a new mathematical structural model is proposed. This model has potentially wide application to structural analysis of polymer materials and other materials generally characterized as being made of viscoelastic materials. A dynamic modulus is derived from the new model for stress relaxation modulus and is compared to the old viscoelastic model and experimental data.

Moore, Carleton J.↗
DOE OSTI2022

RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning

Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB), founding member of the Worldwide Protein Data Bank (wwPDB), is the US data center for the open-access PDB archive. As wwPDB-designated Archive Keeper, RCSB PDB is also responsible for PDB data security. Annually, RCSB PDB serves >10 000 depositors of three-dimensional (3D) biostructures working on all permanently inhabited continents. RCSB PDB delivers data from its research-focused RCSB.org web portal to many millions of PDB data consumers based in virtually every United Nations-recognized country, territory, etc. This Database Issue contribution describes upgrades to the research-focused RCSB.org web portal that created a one-stop-shop for open access to ∼200 000 experimentally-determined PDB structures of biological macromolecules alongside >1 000 000 incorporated Computed Structure Models (CSMs) predicted using artificial intelligence/machine learning methods. RCSB.org is a ‘living data resource.’ Every PDB structure and CSM is integrated weekly with related functional annotations from external biodata resources, providing up-to-date information for the entire corpus of 3D biostructure data freely available from RCSB.org with no usage limitations. Within RCSB.org, PDB structures and the CSMs are clearly identified as to their provenance and reliability. Both are fully searchable, and can be analyzed and visualized using the full complement of RCSB.org web portal capabilities.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1981

Research and development program for non-linear structural modeling with advanced time-temperature dependent constitutive relationships

Results of a 20-month research and development program for nonlinear structural modeling with advanced time-temperature constitutive relationships are reported. The program included: (1) the evaluation of a number of viscoplastic constitutive models in the published literature; (2) incorporation of three of the most appropriate constitutive models into the MARC nonlinear finite element program; (3) calibration of the three constitutive models against experimental data using Hastelloy-X material; and (4) application of the most appropriate constitutive model to a three dimensional finite element analysis of a cylindrical combustor liner louver test specimen to establish the capability of the viscoplastic model to predict component structural response.

Walker, K. P.↗
DOE OSTI2023

Structural models and functional annotations for the Sphagnum divinum proteome

This dataset contains the structural models for the primary transcripts of the Sphagnum divinum proteome. Additionally, for a subset of these proteins, sequence and structural alignment results are provided. This dataset represents the most thorough structural study of a Sphagnum species, also known as peat mosses, by providing three-dimensional atomic resolution structures of the majority of the encoded proteins as well as structural alignment results used in the application of annotating the proteome. References (DOI) AlphaFold v2 Monomer: https://doi.org/10.1038/s41586-021-03819-2. References (DOI) US-align2: https://doi.org/10.1038/s41592-022-01585-1

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1994

Equivalent plate structural modeling for wing shape optimization including transverse shear

A new technique for structural modeling of airplanes wings is presented taking transverse shear effects into account. The kinematic assumptions of first-order shear deformation plate theory in combination with numerical analysis, where simple polynomials are used to define geometry, construction, and displacement approximations, lead to analytical expressions for elements of the stiffness and mass matrices and load vector. Contributions from the cover skins, spar and rib caps, and spar and rib webs are included as well as concentrated springs and concentrated masses. Limitations of wing modeling techniques based on classical plate theory are discussed, and the improved accuracy of the new equivalent plate technique is demonstrated through comparison with finite element analysis and test results. Expressions for analytical derivatives of stiffness, mass, and load terms with respect to wing shape are given. Based on these, it is possible to obtain analytic sensitivities of displacements, stresses, and natural frequencies with respect to planform shape and depth distribution. This makes the new capability an effective structural tool for wing shape optimization.

Livne, Eli↗
NASA NTRS1994

Equivalent Plate Structural Modeling for Wing Shape Optimization Including Transverse Shear

A new technique for structural modeling of airplane wings is presented taking transverse shear effects into account. The kinematic assumptions of first-order shear deformation plate theory In combination with numerical analysis, where simple polynomials are used to define geometry, construction, and displacement approximations, lead to analytical expressions for elements of the stiffness and mass matrices and load vector. Contributions from the cover skins, spar and rib caps, and spar and rib webs are included as well as concentrated springs and concentrated masses. Limitations of wing modeling techniques based on classical plate theory are discussed, and the Improved accuracy of the new equivalent plate technique is demonstrated through comparison with finite element analysis and test results. Expressions for analytical derivatives of stiffness, mass, and load terms with respect to wing shape are given. Based on these, it is possible to obtain analytic sensitivities of displacements, stresses, and natural frequencies with respect to planform shape and depth distribution. This makes the new capability an effective structural tool for wing shape optimization.

Livne, Eli↗
DOE OSTI2026

RCSB protein data Bank: Next‐generation advanced search for exploration of experimental structures and computed structure models

Abstract The Protein Data Bank (PDB), established in 1971, is the primary global, open‐access archive for experimentally determined 3D macromolecular structures (proteins, RNA, DNA). The research‐focused RCSB.org web‐portal provides access to these data alongside more than one million machine‐learning‐predicted structure models, greatly expanding the available structural landscape. Rapid growth of both experimental and computational structures has increased the need for powerful yet accessible search tools that serve a broad and diverse scientific community. Herein, we describe a redesigned RCSB Protein Data Bank RCSB.org Advanced Search capability that supports intuitive discovery of 3D structures through a unified interface. This interface integrates annotation‐, sequence‐, and 3D structure‐based searches, embeds an interactive 3D viewer, and incorporates curated biological knowledge, such as catalytic site definitions from Mechanism and Catalytic Site Atlas and ligand‐guided structural motifs, for constructing geometry‐driven queries. A new Chemical Search tool allows definition of chemical queries via an integrated drawing tool or standard identifiers, seamlessly combining them with annotation filters. By allowing query definition directly within spatial and chemical contexts, these search interfaces reduce the need for detailed knowledge of residue numbering, chain identifiers, or external cheminformatics software. This capability enables efficient exploration of structures, chemical diversity, and structure–function relationships across all life domains. The redesigned interfaces can be accessed directly at rcsb.org/search/advanced for Advanced Search and rcsb.org/search/chemical for Chemical Search.

Rose, Yana [Research Collaboratory for Structural ↗
NASA NTRSDate not supplied

Pathfinder Networks for Measuring Operator Mental Model Structure with a Simple Autopilot System

Pathfinder networks are a method to represent mental models from empirically generated pairwise relatedness ratings. This study examined the effects of training exposure on mental model structures based on relatedness ratings collected using the Target Rating method. Forty-eight participants read instruction slides with or without explicit information on the functionality of an autopilot system (Advanced Mental Model or Basic Mental Model groups, respectively). Participants provided relatedness ratings and completed a comprehension test. The Advanced Mental Model group had more common links with the expected model, higher within-group network similarity scores, and higher mental model assessment questionnaire scores than the Basic Mental Model group. Both groups had coherence scores above the minimum threshold for internal consistency. Pathfinder network analysis was sensitive to changes produced by a simple exposure training intervention. In practice, a simple training program may effectively influence operator mental models in novel technological environments such as Advanced Air Mobility.

Mental Models↗