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All sourcesNASA NTRSDOE OSTI
NASA NTRS1996

Approximate scaling properties of RNA free energy landscapes

RNA free energy landscapes are analysed by means of "time-series" that are obtained from random walks restricted to excursion sets. The power spectra, the scaling of the jump size distribution, and the scaling of the curve length measured with different yard stick lengths are used to describe the structure of these "time series". Although they are stationary by construction, we find that their local behavior is consistent with both AR(1) and self-affine processes. Random walks confined to excursion sets (i.e., with the restriction that the fitness value exceeds a certain threshold at each step) exhibit essentially the same statistics as free random walks. We find that an AR(1) time series is in general approximately self-affine on timescales up to approximately the correlation length. We present an empirical relation between the correlation parameter rho of the AR(1) model and the exponents characterizing self-affinity.

Signal Processing, Computer-Assisted↗
NASA NTRS1985

Simulations of the mean solar magnetic field during sunspot cycle 21

Regarding new bipolar magnetic regions as sources of flux, the evolution of the photospheric magnetic field during 1976-1984 was computed and the corresponding evolution of the mean line-of-sight field as seen from earth was derived. A good, but imperfect, agreement was obtained between the observed mean field and the field computed for a nominal choice of flux transport parameters. The response of the computed mean field to variations in the transport parameters and the source properties was determined. The results suggest that the mean-field evolution is a random-walk process with dissipation. New eruptions of flux produce the random walk, and together differential rotation, meridional flow, and diffusion provide the dissipation. The net effect of each new source depends on its strength and orientation and on the time elapsed before the next eruption.

Sheeley, N. R., Jr.↗
NASA NTRS1999

Migration of lymphocytes on fibronectin-coated surfaces: temporal evolution of migratory parameters

Lymphocytes typically interact with implanted biomaterials through adsorbed exogenous proteins. To provide a more complete characterization of these interactions, analysis of lymphocyte migration on adsorbed extracellular matrix proteins must accompany the commonly performed adhesion studies. We report here a comparison of the migratory and adhesion behavior of Jurkat cells (a T lymphoblastoid cell line) on tissue culture treated and untreated polystyrene surfaces coated with various concentrations of fibronectin. The average speed of cell locomotion showed a biphasic response to substrate adhesiveness for cells migrating on untreated polystyrene and a monotonic decrease for cells migrating on tissue culture-treated polystyrene. A modified approach to the persistent random walk model was implemented to determine the time dependence of cell migration parameters. The random motility coefficient showed significant increases with time when cells migrated on tissue culture-treated polystyrene surfaces, while it remained relatively constant for experiments with untreated polystyrene plates. Finally, a cell migration computer model was developed to verify our modified persistent random walk analysis. Simulation results suggest that our experimental data were consistent with temporally increasing random motility coefficients.

NASA Program Fundamental Space Biology↗
NASA NTRS1976

The interplanetary magnetic field and energetic electrons from Jupiter

The reported four-month 'season' for observation of Jovian electron events at AU is shown to be a plausible consequence of field-line random walk in the solar wind. Values of the field-line random-walk coefficient deduced earlier in connection with observations of solar protons, photospheric supergranulation, and the interplanetary magnetic-field power spectrum, lead to an approximate value for the spread of Jovian electrons at 1 AU, which corresponds to an approximate four-month duration of events. This model is consistent with a point source at Jupiter.

Jokipii, J. R.↗
NASA NTRS1972

Variance reduction in Monte Carlo analysis of rarefied gas diffusion

The present analysis uses the Monte Carlo method to solve the problem of rarefied diffusion between parallel walls. The diffusing molecules are evaporated or emitted from one of two parallel walls and diffused through another molecular species. The analysis treats the diffusing molecule as undergoing a Markov random walk and the local macroscopic properties are found as the expected value of the random variable, the random walk payoff. By biasing the transition probabilities and changing the collision payoffs the expected Markov walk payoff is retained but its variance is reduced so that the M. C. result has a much smaller error.

Perlmutter, M.↗
NASA NTRS1972

Variance reduction in Monte Carlo analysis of rarefied gas diffusion.

The problem of rarefied diffusion between parallel walls is solved using the Monte Carlo method. The diffusing molecules are evaporated or emitted from one of the two parallel walls and diffuse through another molecular species. The Monte Carlo analysis treats the diffusing molecule as undergoing a Markov random walk, and the local macroscopic properties are found as the expected value of the random variable, the random walk payoff. By biasing the transition probabilities and changing the collision payoffs, the expected Markov walk payoff is retained but its variance is reduced so that the Monte Carlo result has a much smaller error.

Perlmutter, M.↗
NASA NTRS1996

Random root movements in weightlessness

The dynamics of root growth was studied in weightlessness. In the absence of the gravitropic reference direction during weightlessness, root movements could be controlled by spontaneous growth processes, without any corrective growth induced by the gravitropic system. If truly random of nature, the bending behavior should follow so-called 'random walk' mathematics during weightlessness. Predictions from this hypothesis were critically tested. In a Spacelab ESA-experiment, denoted RANDOM and carried out during the IML-2 Shuttle flight in July 1994, the growth of garden cress (Lepidium sativum) roots was followed by time lapse photography at 1-h intervals. The growth pattern was recorded for about 20 h. Root growth was significantly smaller in weightlessness as compared to gravity (control) conditions. It was found that the roots performed spontaneous movements in weightlessness. The average direction of deviation of the plants consistently stayed equal to zero, despite these spontaneous movements. The average squared deviation increased linearly with time as predicted theoretically (but only for 8-10 h). Autocorrelation calculations showed that bendings of the roots, as determined from the 1-h photographs, were uncorrelated after about a 2-h interval. It is concluded that random processes play an important role in root growth. Predictions from a random walk hypothesis as to the growth dynamics could explain parts of the growth patterns recorded. This test of the hypothesis required microgravity conditions as provided for in a space experiment.

STS-65 Shuttle Project↗
NASA NTRS1972

Quiet-time electron increases, a measure of conditions in the outer solar system

One possible explanation for quiet-time electron increases, increases in the intensity of 3-12 MeV interplanetary electrons that have been reported by McDonald, Cline and Simnett, is discussed. It is argued that the electrons in quiet-time increases are galactic in origin, but that the observed increases are not the result of any variation in the modulation of these particles in the inner solar system. It is suggested instead that quiet-time increases may occur when more electrons than normal penetrate a modulating region that lies far beyond the orbit of earth. The number of electrons penetrating this region may increase when field lines that have experienced an unusually large random walk in the photosphere are carried by the solar wind out to the region. As evidence for this increased random walk, it is shown that five solar rotations before most of the quiet-time increases there is an extended period when the amplitude of the diurnal anisotropy, as is measured by the Deep River neutron monitor, is relatively low. Five rotations delay time implies that the proposed modulating region lies at approximately 30 AU from the Sun, assuming that the average solar wind speed is constant over this distance at approximately 400 km/sec.

Fisk, L. A.↗
NASA NTRS1972

Quiet-time electron increases - A measure of conditions in the outer solar system.

Discussion of a possible explanation for the increases in the intensity range of 3- to 12-MeV interplanetary electrons that McDonald et al. (1972) have labeled as 'quiet-time electron increases.' It is argued that the electrons in quiet-time increases are galactic in origin but that the observed increases are not the result of any variation in the modulation of these particles in the inner solar system. It is suggested instead that quiet-time increases may occur when more electrons than normal penetrate a modulating region that lies far beyond the orbit of the earth. The number of electrons penetrating this region may increase when field lines that have experienced an unusually large random walk in the photosphere are carried by the solar wind out to the region. As evidence of this increased random walk, it is shown that five solar rotations before most of the quiet-time increases occur there is an extended period when the amplitude of the diurnal anisotropy (measured by the Deep River neutron monitor) is relatively low. A delay time of five rotations implies that the proposed modulating region lies at about 30 AU from the sun if the average solar-wind speed is assumed to be constant at about 400 km/sec over this distance. The implications for the correlation between periods of low-amplitude diurnal anisotropy and quiet-time increases on interplanetary conditions out to about 30 AU and some possible models for the proposed modulating region are also considered.

Fisk, L. A.↗
NASA NTRS1990

A chaotic attractor in timing noise from the Vela pulsar?

Fourteen years of timing residual data from the Vela pulsar have been analyzed in order to determine if a chaotic dynamical process is the origin of timing noise. Using the correlation sum technique, a dimension of about 1.5 is obtained. This low dimension indicates underlying structure in the phase residuals which may be evidence for a chaotic attractor. It is therefore possible that nonlinear dynamics intrinsic to the spin-down may be the cause of the timing noise in the Vela pulsar. However, it has been found that the stimulated random walks in frequency and frequency derivative often used to model pulsar timing noise also have low fractal dimension, using the same analysis technique. Recent work suggesting that random processes with steep power spectra can mimic strange attractors seems to be confirmed in the case of these random walks. It appears that the correlation sum estimator for dimension is unable to distinguish between chaotic and random processes.

Harding, Alice K.↗
NASA NTRS2008

Multiscale Modeling of Ablation and Pyrolysis in PICA-Like materials

During atmospheric entry of planetary probes, the thermal protection system (TIPS) of the probe is exposed to high temperatures under low pressures. In these conditions, carbonous fibrous TIPS materials may undergo oxidation leading to mass loss and wall recession called ablation. This work aims to improve the understanding of material/environment interactions through a study of the coupling between oxygen transport in the Knudsen regime, heterogeneous oxidation of carbon, and surface recession. A 3D Random Walk Monte Carlo simulation tool is used for this study. The fibrous architecture of a model material, consisting of high porosity random array of carbon fibers, is numerically represented on a 3D Cartesian grid. Mass transport in the Knudsen regime from the boundary layer to the surface, and inside this porous material is simulated by random walk. A reaction probability is used to simulate the heterogeneous oxidation reaction. The surface recession of the fibers is followed by front tracking using a simplified marching cube approach. The output data of the simulations are ablation velocity and dynamic evolution of the material porosity. A parametric study is carried out to analyze the material behavior as a function of Knudsen number for the porous media (length of the mean free path compared to the mean pore diameter) and the intrinsic reactivity of the carbon fibers. The model is applied to Stardust mission reentry conditions and explains the unexpected behavior of the TIPS material that underwent mass loss in volume.

Lachaud, Jean↗
NASA NTRS1985

Monte Carlo lattice models for adsorbed polymer conformation

The adhesion between a polymer film and a metal surface is of great technological interest. However, the prediction of adhesion and wear properties of polymer coated metals is quite difficult because a fundamental understanding of the polymer surface interaction does not yet exist. A computer model for the conformation of a polymer molecule adsorbed on a surface is discussed. The chain conformation is assumed to be described by a partially directed random walk on a three dimensional simple cubic lattice. An attractive surface potential is incorporated into the model through the use of a random walk step probability distribution that is anisotropic in the direction normal to the attractive surface. The effects of variations in potential characteristics are qualitatively included by varying both the degree of anisotropy of the step distribution and the range of the anisotropy. Polymer conformation is characterized by the average end to end distance, average radius of gyration, and average number of chain segments adsorbed on the surface.

Good, B. S.↗
NASA NTRS1976

Low pressure radon diffusion - A laboratory study and its implications for lunar venting

Results of a study of radon migration through columns of fine particulate materials, at total pressures of 0.02-0.2 torr, are reported. Materials studied were: NBS Glass Spheres (SRM 1003), Emerson & Cuming Eccospheres (IG-101), activated coconut charcoal, Lipaci obsidian, and W-1 Standard Diabase. Rates of diffusion were used to derive heats of adsorption for radon on the materials tested. The most reliable values found clustered around 8-9 kcal/mole. These high heats of adsorption, if typical for most materials, combined with low percentages of radon emanation by lunar soils found by other researchers, imply that random walk diffusion will not be an important mechanism for redistributing the radon and the radon daughters produced in the lunar regolith. In particular, since random walk migration is not a sufficient mechanism to account for localized high concentrations of radon-222 and its daughter polonium-210 observed by the Apollo 15 and 16 command modules, an alternative mechanism is proposed, in which radon would be swept to the surface by other gases during intermittent venting events.

Friesen, L. J.↗
NASA NTRS1982

The noise of BL Lacertae

Results are presented from an intensive optical and IR monitoring program of the flux and polarization characteristics of BL Lac. It is found that the polarization variations increase in amplitude with increasing time interval, and that the path traced out by the polarization vector in the Q-U plane is a random walk. In view of earlier measurements of BL Lac, the polarization fluctuations can be represented at low frequencies by the flat power spectrum of white noise, up to a frequency of 0.05 cycles/day. Above this frequency, the spectrum steepens to that of a random walk. A model for BL Lac suggested by the polarimetric noise can be constructed from independent sources of light with randomly oriented, strong polarization. Small random differences in spectral index from source to source could also explain the variable wavelength dependence of polarization.

Moore, R. L.↗
NASA NTRS2003

Self-Supervised Dynamical Systems

Some progress has been made in a continuing effort to develop mathematical models of the behaviors of multi-agent systems known in biology, economics, and sociology (e.g., systems ranging from single or a few biomolecules to many interacting higher organisms). Living systems can be characterized by nonlinear evolution of probability distributions over different possible choices of the next steps in their motions. One of the main challenges in mathematical modeling of living systems is to distinguish between random walks of purely physical origin (for instance, Brownian motions) and those of biological origin. Following a line of reasoning from prior research, it has been assumed, in the present development, that a biological random walk can be represented by a nonlinear mathematical model that represents coupled mental and motor dynamics incorporating the psychological concept of reflection or self-image. The nonlinear dynamics impart the lifelike ability to behave in ways and to exhibit patterns that depart from thermodynamic equilibrium. Reflection or self-image has traditionally been recognized as a basic element of intelligence. The nonlinear mathematical models of the present development are denoted self-supervised dynamical systems. They include (1) equations of classical dynamics, including random components caused by uncertainties in initial conditions and by Langevin forces, coupled with (2) the corresponding Liouville or Fokker-Planck equations that describe the evolutions of probability densities that represent the uncertainties. The coupling is effected by fictitious information-based forces, denoted supervising forces, composed of probability densities and functionals thereof. The equations of classical mechanics represent motor dynamics that is, dynamics in the traditional sense, signifying Newton s equations of motion. The evolution of the probability densities represents mental dynamics or self-image. Then the interaction between the physical and metal aspects of a monad is implemented by feedback from mental to motor dynamics, as represented by the aforementioned fictitious forces. This feedback is what makes the evolution of probability densities nonlinear. The deviation from linear evolution can be characterized, in a sense, as an expression of free will. It has been demonstrated that probability densities can approach prescribed attractors while exhibiting such patterns as shock waves, solitons, and chaos in probability space. The concept of self-supervised dynamical systems has been considered for application to diverse phenomena, including information-based neural networks, cooperation, competition, deception, games, and control of chaos. In addition, a formal similarity between the mathematical structures of self-supervised dynamical systems and of quantum-mechanical systems has been investigated.

Zak, Michail↗
NASA NTRS1995

Putting quasilinear theory to the test: A comparison of analytical theory with results from a trajectory code

Parallel and perpendicular diffusion coefficients were computed numerically by following particle orbits in a simulated magnetic field. The simulated field was chosen to have delta B/B(sub o) small, so as to provide a test of quasilinear theory in a regime where the theory should be most accurate. The simulation space is large enough to contain many magnetic field correlation lengths, so that effects of field line random walk can be studied. After presenting results for parallel diffusion, we will focus on two controversial issues relating to perpendicular diffusion: (1) Do quasilinear descriptions of perpendicular diffusion retain any validity for particles whose Larmor radius is smaller than a correlation length? (2) Does field line random walk lead to particle diffusion in the usual sense, or does it produce 'compound' diffusion for which particles spread out proportionally to t(exp 1/4) instead of t(exp 1/2)?

Bieber, J. W.↗
NASA NTRS2000

Comparison of On-Orbit Performance of Rate Sensing Gyroscopes

This work presents results from the study of a large volume of spacecraft flight data pertaining to gyroscope performance. We have examined long and short term trends of gyroscope biase of first, an exact solution for the time-dependence of the attitude part of the state error covariance, averaged over the three spacecraft axes, is given. This solution is more complete than the usual cubic polynomial for the variance in that it includes coupling among the three gyroscope axes and includes an important term arising from the initial correlations. Second, several continuous 24-hour spans of gyroscope data are examined to verify the short-term statistical model. This analysis demonstrates that in-flight data can be used to determine the strength of the white noise driving the random walk of the gyroscope bias. This may be useful for postlaunch improvement to the noise model and for diagnosing the health of the gyroscope. Third, the long-term trends in gyroscope biases show a nearly linear systematic variation over time scales of years. This has been found on three different missions. While the random walk model is adequate as a basis for onboard Kalman filters or for state estimation using relatively short time spans, these trends indicate that some applications could benefit by accounting for the secular changes in the biases. One example is a new gyroscope calibration method that is under development that allows for multi-epoch bias solutions.

Sedlak, Joseph↗
NASA NTRS1990

Stochastic estimation of tropospheric path delays in global positioning system geodetic measurements

Water vapor radiometric and surface meteorological measurements taken during three GPS geodetic experiments are used to calculate process noise levels for random walk and first-order Gauss-Markov temporal models of tropospheric path delays. Entire wet and combined wet and dry zenith delays at each network site are estimated simultaneously with the geodetic parameters without prior calibration. The path delays and corresponding baseline estimates are compared to those obtained with calibrated data and stochastic residual delays. In this manner, the marginal utility of a priori tropospheric calibration is assessed given the ability to estimate the path delays directly using only the GPS data. Estimation of total zenith path delays with appropriate random walk or Gauss-Markov models yields baseline repeatabilities of a few parts in 100 million. Results suggest that GPS data alone have sufficient strength to resolve centimeter-level zenith path delay fluctuations over periods of a few minutes.

Tralli, David M.↗