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All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Multi-Attribute Subset Selection enables prediction of representative phenotypes across microbial populations

The interpretation of complex biological datasets requires the identification of representative variables that describe the data without critical information loss. This is particularly important in the analysis of large phenotypic datasets (phenomics). Here we introduce Multi-Attribute Subset Selection (MASS), an algorithm which separates a matrix of phenotypes (e.g., yield across microbial species and environmental conditions) into predictor and response sets of conditions. Using mixed integer linear programming, MASS expresses the response conditions as a linear combination of the predictor conditions, while simultaneously searching for the optimally descriptive set of predictors. We apply the algorithm to three microbial datasets and identify environmental conditions that predict phenotypes under other conditions, providing biologically interpretable axes for strain discrimination. MASS could be used to reduce the number of experiments needed to identify species or to map their metabolic capabilities. The generality of the algorithm allows addressing subset selection problems in areas beyond biology.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Characterization and differentiation of aluminum powders used in improvised explosive devices. Part 2: Micromorphometric method refinement and preliminary statistical analysis

Abstract Aluminum (Al) powder is commonly encountered in improvised explosive devices (IEDs) as a metallic fuel due to its availability and low cost. Although available commercially in powder form, amateur bomb‐makers also produce their own Al powder via simple methods found online. In order to provide investigative leads and forensic intelligence, it is important to evaluate not only the composition of homemade devices, but also to distinguish between the various forms of Al powder they contain. To achieve this goal, a method using automated microscopy in combination with statistical techniques has been demonstrated to have the potential to provide source discrimination and investigative leads in source attribution of Al powders in IEDs. The present research refined this method and investigated 59 industrially and amateurly produced Al powder sources with seven subsamples per source using two traditional linear discriminant analyses (LDA), one with a standard data split for training and testing, and another using leave‐one‐out cross‐validation. Averaging the classification accuracies for the two LDA‐based analyses, LDA has the ability to correctly classify 59.26%, 83.35%, and 80.69% of the samples based on their powder source, type, and production method, respectively. This classification accuracy represents a 3407%, 317%, and 61.38% increase in accuracy from random class assignment, respectively. Further, in most instances of incorrect data attribution to a particular source, the subsample has been misidentified with another sample of the same powder type or production method.

Ommen, Danica M.↗
DOE OSTI2024

Application of Partial Least Squares Approaches to Pyroprocessing ER Data

Multivariate approaches show promise for application to process monitoring for safeguards of pyroprocessing. Past MPACT work explored the application of Principal Component Analysis (PCA) to detect off-normal conditions in pyroprocessing electrorefiner (ER) data from in the Hot Fuel Examination Facility (HFEF) at Idaho National Laboratory (INL) known as the Scalable Pyrochemical Recycling testbed (SPyRe) ER. PCA, however, does not consider the output variables. In FY24, multivariate analysis was extended from PCA to Partial Least Squares (PLS) analysis. PLS maximizes the variance between both the input signals and output variables. In the case of this work, PLS was applied in two different manners: Predictive PLS and Discriminant PLS. Predictive PLS maximizes the covariance between the process variables of the ER and the measured U concentration from in-situ voltammetry. Discriminant PLS maximizes the covariance between the process variables and a set of training process “states” such as known off-normal conditions. By projecting into the latent variable space in PLS, the process variables can be regressed onto the outputs and predictions can be made for new data sets. In this work, by applying predictive PLS, a penalized non-linear PLS approach was able to make predictions of concentration based on test and training data and detect when operations were off-normal. However, the predictive PLS does not classify the signals to which off-normal operations are attributable. Discriminant PLS can be used to classify off-normal operations but is inadequate to properly classify specific off-normal classes like power supply faults when the Discriminant PLS model is only specifically trained to detect that off-normal class. When all faults are trained against the observation data, all three operational classes are accurately classified and distinguished. Thus, future application of latent variable techniques should not select any given method, but should use a mixture of PCA, Predictive PLS, and Discriminant PLS.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2020

Discriminating Accretion States via Rotational Symmetry in Simulated Polarimetric Images of M87

In 2017 April, the Event Horizon Telescope observed the shadow of the supermassive black hole at the core of the elliptical galaxy Messier 87. While the original image was constructed from measurements of the total intensity, full polarimetric data were also collected, and linear polarimetric images are expected in the near future. We propose a modal image decomposition of the linear polarization field into basis functions with varying azimuthal dependence of the electric vector position angle. We apply this decomposition to images of ray traced general relativistic magnetohydrodynamics simulations of the Messier 87 accretion disk. Furthermore, for simulated images that are physically consistent with previous observations, the magnitude of the coefficient associated with rotational symmetry, β2, is a useful discriminator between accretion states. We find that at 20 μas resolution, $| {\beta }_{2}| $ is greater than 0.2 only for models of disks with horizon-scale magnetic pressures large enough to disrupt steady accretion. We also find that images with a more radially directed electric vector position angle correspond to models with higher black hole spin. Our analysis demonstrates the utility of the proposed decomposition as a diagnostic framework to improve constraints on theoretical models.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Response of a high-pressure 4 He scintillation detector to nuclear recoils up to 9 MeV

Helium-4-based scintillation detector technology is emerging as a strong alternative to pulse-shape discrimination-capable organic scintillators for fast neutron detection and spectroscopy, particularly in extreme gamma-ray environments. The 4 He detector is intrinsically insensitive to gamma radiation, as it has a relatively low cross-section for gamma-ray interactions, and the stopping power of electrons in the 4 He medium is low compared to that of 4 He recoil nuclei. Consequently, gamma rays can be discriminated by simple energy deposition thresholding instead of the more complex pulse shape analysis. The energy resolution of 4 He scintillation detectors has not yet been well-characterized over a broad range of energy depositions, which limits the ability to deconvolve the source spectra. In this work, an experiment was performed to characterize the response of an Arktis S670 4 He detector to nuclear recoils up to 9 MeV. The 4 He detector was positioned in the center of a semicircular array of organic scintillation detectors operated in coincidence. Deuterium–deuterium and deuterium–tritium neutron generators provided monoenergetic neutrons, yielding geometrically constrained nuclear recoils ranging from 0.0925 to 8.87 MeV. The detector response provides evidence for scintillation linearity beyond the previously reported energy range. Finally, the measured response was used to develop an energy resolution function applicable to this energy range for use in high-fidelity detector simulations needed by future applications.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2022

Digital pulse analysis for fast neutron recoil spectroscopy with a 4 He scintillation detector

Helium-4-based fast neutron scintillation detectors are an attractive alternative to pulse-shape discrimination-capable organic scintillators for fast neutron detection and spectroscopy, as the response of the detectors to gamma rays is intrinsically limited to low energy deposition. Consequently, the neutron recoil distribution can be measured with these detectors without the need for pulse shape analysis. In this work, the response of an Arktis S670 4 He scintillation detector to D-D, D-T, and 252 Cf neutrons was measured. The detector has a unique construction and readout mechanism, with multiple output channels observing the same scintillation event, and an analysis method was developed to aggregate the outputs from all channels into a single list. The D-D and D-T neutron responses were used to perform a two-point energy calibration, which yielded a near-zero intercept, suggesting that the 4 He scintillation medium behaves linearly to a higher energy than previously reported, and that a two-point calibration is sufficient for nuclear recoil energies below 9 MeV. As a result, the detector was measured to have 16.7-ns FWHM time resolution when using the developed custom analysis, a reduction of 4.9 ns when compared to the conventional pulse analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2022

Application of Linear Additive Conditions for Near-Infrared Diffuse Reflectance Absorption Spectroscopy

Determining the homogeneity of material mixing in real time during product processing is critical for quality control. According to the Kubelka–Munk (K-M) function of diffuse reflectance absorption spectrum, absorbance (A) is approximately linear with the content of the components when the sample scattering coefficient (S) is in a certain range. The S is determined by the particle size of powder samples. Therefore, this study determined particle size ranges that satisfy linear additivity in near-infrared diffuse reflectance spectroscopy (NIRDRS). Thus, the proposed NIRDRS analysis technique can be used to determine the homogeneity of material mixes or analyze the percentages of the components in the mixture. In this study, vitamin B3 and vitamin C were used for preparing mixed samples with varying percentages. The experimental results revealed that linear additivity is satisfied when the powder particle size is in the range of less than 280, 280–450, and 450–900 μm. When the confidence level is 0.01, the actual mixed spectra are not significantly different from the “simulated mixed spectra” constructed by linear addition, with their relative deviations less than 1.08%. The absolute errors of the actual and analytic percentages were within 2.98% for each component in the mixtures. The above conclusions also hold for sorghum, which has a complex material composition. Statistical models cannot analyze the percentages of components in the mixture. In contrast, linear addition and direct calibration approach avoids the use of a large number of samples for statistical modeling and analyze the percentages of mixed samples. Meanwhile, it can be used to discriminate and analyze the material mixing uniformity by building a mechanistic model.

Feng, Zhiyue↗
DOE OSTI2025

Photon counting with intensified charge coupled device (ICCD) – II. Laser induced breakdown spectroscopy (LIBS) spectral measurement

This study explores the application of photon counting (PC) to enhance the resolution of spectra acquired by an intensified charge-coupled device (ICCD) detector, with a focus on analytical atomic emission spectrometry using laser-induced breakdown spectroscopy (LIBS) as a use-case example. It demonstrates that, for spectra obtained with the same spectrometer–ICCD system, PC provides higher spectral resolution compared to conventional analog detector readout. This enhancement is particularly evident in the line wings of spectral peaks, facilitating better discrimination of isotopic peaks in the measured spectra. Although PC does not improve the resolution of an optical spectrometer directly, it rectifies the resolution lost caused by signal spreading in conventional ICCD analog measurement. However, similar to other counting techniques, excessive photons compromise detector linearity due to signal pileup. A correction model is proposed to mitigate the pileup effect, resulting in improved linearity and dynamic range in PC measurements. Additionally, the study reveals unexpected periodic structures in the flatfield image of the ICCD, which cause non-uniform detector gain in conventional analog as well as PC measurement modes and must be addressed for high-precision measurements.

47 OTHER INSTRUMENTATION↗
DOE OSTI2022

High-fidelity photoneutron detection via neutron activation analysis

To interdict illicit radioactive sources and prevent nuclear terror, governments have deployed portal monitor systems at ports of entry. Such portal monitors rely upon the detection of spontaneously-emitted radiation signatures, however, detection scenarios become more challenging for highly enriched uranium, which emits relatively few spontaneous radiation signatures. Photon active interrogation techniques can augment current cargo inspection scenarios and improve detection capabilities for illicit nuclear material. A high-energy photon interrogation source can induce photofission in nuclear material, producing strong radiation signatures for detection. Prompt fission signals are of specific interest because prompt neutrons are greater than 99% of the fission signal. When using detectors capable of spectroscopy, e.g., pulse shape discrimination-capable organic scintillators, the intense interrogating source often will cause pulse pile-up, degrading particle classification. In this work, we demonstrate photoneutron detection via neutron activation of aluminum and iron. The experiments rely upon nuclear reactions that can only be induced by neutrons, and are robust against pile-up, thereby providing high-confidence neutron rates. In this work, we apply neutron activation analysis for the detection of high-energy neutrons produced by high-energy photon irradiation; the depleted uranium sample was irradiated with a 9-MeV bremsstrahlung beam. We find that the irradiated depleted uranium produced an aluminum activation flux of 1.77 × 10 5 n cm –2 s –1 and an iron-56 activation flux of 1.05 × 10 5 n cm –2 s –1 . Furthermore, the ability to detect radioactivity induced by neutrons created in (, n) and photofission reactions demonstrates a new approach for photon active interrogation to identify nuclear materials.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2021

Galaxy morphological classification catalogue of the Dark Energy Survey Year 3 data with convolutional neural networks

ABSTRACT We present in this paper one of the largest galaxy morphological classification catalogues to date, including over 20 million galaxies, using the Dark Energy Survey (DES) Year 3 data based on convolutional neural networks (CNNs). Monochromatic i-band DES images with linear, logarithmic, and gradient scales, matched with debiased visual classifications from the Galaxy Zoo 1 (GZ1) catalogue, are used to train our CNN models. With a training set including bright galaxies (16 ≤ i < 18) at low redshift (z < 0.25), we furthermore investigate the limit of the accuracy of our predictions applied to galaxies at fainter magnitude and at higher redshifts. Our final catalogue covers magnitudes 16 ≤ i < 21, and redshifts z < 1.0, and provides predicted probabilities to two galaxy types – ellipticals and spirals (disc galaxies). Our CNN classifications reveal an accuracy of over 99 per cent for bright galaxies when comparing with the GZ1 classifications (i < 18). For fainter galaxies, the visual classification carried out by three of the co-authors shows that the CNN classifier correctly categorizes discy galaxies with rounder and blurred features, which humans often incorrectly visually classify as ellipticals. As a part of the validation, we carry out one of the largest examinations of non-parametric methods, including ∼100 ,000 galaxies with the same coverage of magnitude and redshift as the training set from our catalogue. We find that the Gini coefficient is the best single parameter discriminator between ellipticals and spirals for this data set.

79 ASTRONOMY AND ASTROPHYSICS↗