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All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Compost Amendment to a Grazed California Annual Grassland Increases Gross Primary Productivity Due To a Longer Growing Season

Abstract Compost amendment to rangelands is a proposed nature‐based climate solution to increase plant productivity and soil carbon sequestration. However, it has not been evaluated using quasicontinuous ecosystem‐scale measurements. Here, we present the first study to utilize eddy covariance and footprint partitioning to monitor carbon exchange in a grassland with and without compost amendment, monitoring for 1 year before and 1 year after treatment. Compost amendment to an annual California grassland was found to enhance net ecosystem removal of carbon. Our study confirmed that compost‐amended grasslands, similar to nonamended grasslands, are net carbon sources to the atmosphere; however, the amendment appears to be slowing down the rate at which these ecosystems lose carbon by 0.71 Mg C ha −1 per growing season. Digital repeated imagery of the canopy revealed that compost‐amended grasslands experienced an earlier green‐up, resulting in an overall longer growing season by >60 days. Notably, we did not detect significantly higher amounts of soil carbon in compost‐amended soils. High variability in soil carbon demands greater sampling replication in future studies. A longer growing season and higher productivity are hypothesized to be a result of greater availability of macronutrients and micronutrients in the top layer of soil (specifically nitrogen, phosphorus, and zinc).

Fenster, Tommy L. D.↗
DOE OSTI2021

The influence of fire aerosols on surface climate and gross primary production in the Energy Exascale Earth System Model (E3SM)

Fire-emitted aerosols play an important role in influencing Earth’s climate, directly by scattering and absorbing radiation and indirectly by influencing cloud microphysics. The quantification of fire-aerosol interactions, however, remains challenging and subject to uncertainties in emissions, plume parameterizations, and aerosol properties. Here we optimized fire-associated aerosol emissions in the Energy Exascale Earth System Model (E3SM) using the Global Fire Emissions Database (GFED) and AERONET aerosol optical depth (AOD) observations during 1997-2016. Furthermore, we distributed fire emissions vertically using smoke plume heights from Multi-angle Imaging SpectroRadiometer (MISR) satellite observations. From the optimization, we estimate that global fires emit 45.5 Tg y -1 of primary particulate organic matter and 3.9 Tg y -1 of black carbon. We then performed two climate simulations with and without the optimized fire emissions. We find that fire aerosols significantly increase global AOD by 14 ± 7% and contribute to a reduction in net shortwave radiation at the surface (-2.3 ± 0.5 W m -2 ). Together, fire-induced direct and indirect aerosol effects cause annual mean global land surface air temperature to decrease by 0.17 ± 0.15°C, relative humidity to increase by 0.4 ± 0.3%, and diffuse light fraction to increase by 0.5 ± 0.3%. In response, GPP declines by 2.8 Pg C y -1 , as a result of large positive drivers (decreases in temperature and increases in humidity and diffuse light) nearly cancelling out large negative drivers (decreases shortwave radiation and soil moisture). Our analysis highlights the importance of fire aerosols in modifying surface climate and photosynthesis across the tropics.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Impacts of land use change and elevated CO 2 on the interannual variations and seasonal cycles of gross primary productivity in China

Climate change, rising CO 2 concentration, and landuse and land cover change (LULCC) are primary driving forces for terrestrialgross primary productivity (GPP), but their impacts on the temporal changesin GPP are uncertain. In this study, the effects of the three main factorson the interannual variation (IAV) and seasonal cycle amplitude (SCA) of GPPin China were investigated using 12 terrestrial biosphere models from theMulti-scale Synthesis and Terrestrial Model Intercomparison Project. Thesimulated ensemble mean value of China's GPP between 1981 and 2010, drivenby common climate forcing, LULCC and CO 2 data, was found to be7.4±1.8 Pg C yr -1 . In general, climate was the dominant controlfactor of the annual trends, IAV and seasonality of China's GPP. Theoverall rising CO2 led to enhanced plant photosynthesis, thusincreasing annual mean and IAV of China's total GPP, especially innortheastern and southern China, where vegetation is dense. LULCC decreasedthe IAV of China's total GPP by ~7%, whereas rising CO 2 induced an increase of 8 %. Compared to climate change andelevated CO 2 , LULCC showed less contributions to GPP's temporalvariation, and its impact acted locally, mainly in southwestern China.Furthermore, this study also examined subregional contributions to thetemporal changes in China's total GPP. Southern and southeastern Chinashowed higher contributions to China's annual GPP, whereas southwestern andcentral parts of China explained larger fractions of the IAV in China's GPP.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Diverging climate response of corn yield and carbon use efficiency across the U.S.

Abstract In this paper, we developed an open-source package to analyze the overall trend and responses of both carbon use efficiency (CUE) and corn yield to climate factors for the contiguous United States. Our algorithm enables automatic retrieval of remote sensing data through the Google Earth Engine (GEE) and U.S. Department of Agriculture (USDA) agricultural production data at the county level through application programming interface (API). Firstly, we integrated satellite products of net primary productivity and gross primary productivity based on the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor, and climatic variables from the European Centre for Medium-Range Weather Forecasts. Secondly, we calculated CUE and commonly used climate metrics. Thirdly, we investigated the spatial heterogeneity of these variables. We applied a random forest algorithm to identify the key climate drivers of CUE and crop yield, and estimated the responses of CUE and yield to climate variability using the spatial moving window regression across the U.S. Our results show that growing degree days (GDD) has the highest predictive power for both CUE and yield, while extreme degree days (EDD) is the least important explanatory variable. Moreover, we observed that in most areas of the U.S., yield increases or stays the same with higher GDD and precipitation. However, CUE decreases with higher GDD in the north and shows more mixed and fragmented interactions in the south. Notably, there are some exceptions where yield is negatively correlated with precipitation in the Missouri and Mississippi River Valleys. As global warming continues, we anticipate a decrease in CUE throughout the vast northern part of the country, despite the possibility of yield remaining stable or increasing.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Constraining long‐term model predictions for woody growth using tropical tree rings

The strength and persistence of the tropical carbon sink hinges on the long-term responses of woody growth to climatic variations and increasing CO 2 . However, the sensitivity of tropical woody growth to these environmental changes is poorly understood, leading to large uncertainties in growth predictions. Here, we used tree ring records from a Southeast Asian tropical forest to constrain ED2.2-hydro, a terrestrial biosphere model with explicit vegetation demography. Specifically, we assessed individual-level woody growth responses to historical climate variability and increases in atmospheric CO 2 (C a ). When forced with historical C a , ED2.2-hydro reproduced the magnitude of increases in intercellular CO 2 concentration (a major determinant of photosynthesis) estimated from tree ring carbon isotope records. In contrast, simulated growth trends were considerably larger than those obtained from tree rings, suggesting that woody biomass production efficiency (WBPE = woody biomass production:gross primary productivity) was overestimated by the model. The estimated WBPE decline under increasing C a based on model-data discrepancy was comparable to or stronger than (depending on tree species and size) the observed WBPE changes from a multi-year mature-forest CO 2 fertilization experiment. In addition, we found that ED2.2-hydro generally overestimated climatic sensitivity of woody growth, especially for late-successional plant functional types. The model-data discrepancy in growth sensitivity to climate was likely caused by underestimating WBPE in hot and dry years due to commonly used model assumptions on carbon use efficiency and allocation. To our knowledge, this is the first study to constrain model predictions of individual tree-level growth sensitivity to C a and climate against tropical tree-ring data. Our results suggest that improving model processes related to WBPE is crucial to obtain better predictions of tropical forest responses to droughts and increasing C a . Finally, more accurate parameterization of WBPE will likely reduce the stimulation of woody growth by C a rise predicted by biosphere models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Data and Scripts associated with a manuscript on ecosystem responses to wildfires in the Columbia River Basin

This data package is associated with the publication “Ecosystem leaf area, gross primary production, and evapotranspiration responses to wildfire in the Columbia River Basin” submitted to Biogeosciences (Shi et al., 2024; doi: 10.22541/au.171053013.30286044/v1). In this research, data products, leaf area index (LAI), gross primary production (GPP), and evapotranspiration (ET), from the Moderate Resolution Imaging Spectroradiometer (MODIS) are used to quantify the resistance and resilience of different ecosystem types in the Columbia River Basin (CRB). A machine learning algorithm, random forest (RF), was used to examine the impacts of precipitation, vapor pressure deficit (VPD), and burn severity from Monitoring Trends in Burn Severity (MTBS) on ecosystem resilience. The data package includes the processed MODIS data products, precipitation, VPD, and burn severity in 138 fire regions in CRB and the input files for RF model training. This data package includes six folders. The MODIS products are included in three MODIS_* folders with shell scripts for data clipping and *ncl files for data processing: (1) “/MODIS_LAI_CRB”; (2) “/MODIS_GPP_CRB”; and (3) “/MODIS_ET_CRB”. All the processed data for each fire event are NetCDF formatted. The MTBS burn severity data and the shell and *ncl scripts used for data processing are in the folder named (4) “MTBS_fire”. The ERA meteorological fields and the data processing scritps are in (5) “ERA_Var_CR”. All the scripts for figure development are in the format of *ncl and in the folder (6) “paper_scripts”. See the file ending in “flmd.csv” for a list of all files contained in this data package and descriptions for each. Tabular column headers and units are described in the data dictionary file ending in “dd.csv”.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Remotely Sensed Carbonyl Sulfide Constrains Model Estimates of Amazon Primary Productivity

We report understanding the magnitude of tropical gross primary production (GPP) is critical for carbon cycle modeling and climate projections, but this quantity is poorly constrained at regional scales. Biospheric uptake of carbonyl sulfide (OCS) provides a promising approach to estimating regional GPP. Here, we simulate OCS concentrations driven by surface flux scenarios encompassing a wide range of GPP estimates for the Amazon basin. We compare the model output to satellite retrievals and find a regional GPP estimate of 2375 ± 914 g(C) m –2 yr –1 , consistent with previous estimates, including the TRENDY model ensemble range of 1431–3812 g(C) m –2 yr –1 .

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Global maximum carboxylation rate trait scaling in the Sheffield Dynamic Global Vegetation Model 1901-2012

This data package contains model output data and climate input data associated with the New Phytologist publication: Walker, A.P., Quaife, T., van Bodegom, P.M., De Kauwe, M.G., Keenan, T.F., Joiner, J., Lomas, M.R., MacBean, N., Xu, C., Yang, X., Woodward, F.I., 2017. The impact of alternative trait-scaling hypotheses for the maximum photosynthetic carboxylation rate (Vcmax) on global gross primary production. New Phytologist 215, 1370–1386. https://doi.org/10.1111/nph.14623. This dataset contains maximum carboxylation rate at 25 ºC (Vcmax,25), Gross Primary Production (GPP), Net Biome Production (NBP), vegetation carbon, and soil carbon data from Sheffield Dynamic Global Vegetation Model (SDGVM) for multiple trait-scaling methods for scaling Vcmax,25 across Earth, and alternative instantaneous temperature scaling functions. Vcmax,25 values are mean top-leaf values taken during the growing seasons, which were defined as periods during which leaf area index (LAI) was greater than one. Vcmax,25 values were reported prior to scaling of Vcmax by water-stress or leaf-age. The attached metadata file (SDGVM_vcmax_dataset.docx) describes the methods used and explains the organization of data within the included .zip file. This metadata file is also included in PDF format.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Systematic Evaluation of Atmospheric Forcing, Surface Datasets, and Mesh Effects on Kilometer-Scale Land Surface and River Modeling

Earth system models are advancing toward kilometer-scale resolution to capture local climate impacts and extremes. High-resolution land and river modeling depends on multiple factors, including mesh, surface datasets, and atmospheric forcing, but their relative effects at kilometer scales remain unquantified. We evaluated five Energy Exascale Earth System Model land and river configurations over the Mid-Atlantic region using two mesh (1/8° structured versus variable-resolution unstructured mesh), two surface datasets (default versus newly developed), and three atmospheric forcings (NLDAS2, MSWX, GSWP). Evaluation against satellite, reanalysis, and in situ benchmarks across water, energy, and carbon cycles quantifies how these factors affect model performance. Forcing selection produces the largest bias reductions (12-99% across variables), followed by surface datasets (7-75%) and mesh (up to 21%). Forcing effects vary by variable, with MSWX reducing biases for snow water equivalent, evapotranspiration, albedo, temperature, and gross primary productivity, GSWP for snow cover and runoff, and NLDAS for soil moisture and streamflow. The use of newly developed surface datasets improves gross primary productivity (58% bias reduction) and evapotranspiration but increase soil moisture and albedo biases due to current modeling limitations. Variable-resolution unstructured mesh improves the simulation of small-basin streamflow through better capturing drainage networks, though mesh minimally affects other land variables. These findings provide important guidance for high-resolution modeling development and actionable science.

Land and River modeling↗
DOE OSTI2022

Cross-biome synthesis of source versus sink limits to tree growth

Uncertainties surrounding tree carbon allocation to growth are a major limitation to projections of forest carbon sequestration and response to climate change. The prevalence and extent to which carbon assimilation (source) or cambial activity (sink) mediate wood production are fundamentally important and remain elusive. We quantified source-sink relations across biomes by combining eddy-covariance gross primary production with extensive on-site and regional tree ring observations. We found widespread temporal decoupling between carbon assimilation and tree growth, underpinned by contrasting climatic sensitivities of these two processes. Substantial differences in assimilation-growth decoupling between angiosperms and gymnosperms were determined, as well as stronger decoupling with canopy closure, aridity, and decreasing temperatures. Our results reveal pervasive sink control over tree growth that is likely to be increasingly prominent under global climate change.

Science & Technology - Other Topics↗
DOE OSTI2023

Spatial Study 2022: Water Column, Sediment, and Total Ecosystem Respiration Rates across the Yakima River Basin, Washington, USA (v2)

This dataset supports a broader study examining the drivers of spatial variability in sediment respiration rates in the Yakima River Basin and is associated with the manuscript “Sediment-associated processes account for most of the spatial variation in ecosystem respiration in the Yakima River basin” submitted to Nature Communications Earth & Environment (Garayburu-Caruso et al., in review). The dataset provides ecosystem metabolism estimates generated from streamMetabolizer (Appling et al.; 2018) using data collected during the same five-week period at 48 sites within multiple rivers throughout the Yakima River Basin in Washington, USA. Additionally, it includes the scripts used for the analysis and producing the figures in the manuscript. The contents include streamMetabolizer inputs and outputs and additional relevant data needed to generate the main manuscript results. The data included are: total ecosystem respiration, water respiration, calculated sediment-associated respiration, gross primary production outputs from the river corridor model for the Yakima River Basin, median grain size (d50), depth, dissolved oxygen, water temperature, pressure, and annual oxygen consumption. The associated GitHub repository can be found at https://github.com/river-corridors-sfa/SSS_metabolism. Samples collected during this study were labeled as “Second Spatial Study” or “SSS.” Raw time series sensor data, total suspended solids, and depth data from SSS were published at https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1969566. A subset of data from the SSS samples were published in the contiguous United States (CONUS)-Scale Model-Sample (CM) study data package available at https://data.ess-dive.lbl.gov/view/doi:10.15485/1923689 that presents data from across the CONUS. They include dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC), total nitrogen (TN), grain size, aerobic sediment respiration, dissolved oxygen (DO), and temperature. Parent IDs and Site IDs are consistent between the SSS and CM data packages, and they can be mapped directly so data across packages can be used together. Field metadata for the samples in this da This dataset is comprised of one main data folder with four subfolders. The main data folder contains of (1) file-level metadata; (2) data dictionary; (3) total/water column/sediment respiration; (4) gross primary production (GPP); (5) median grain size (d50); and (6) annual oxygen consumption. The “Figures” subfolder contains the figures used in the paper and all intermediate files (including geospatial files). The “Published_Data” contains a readme directing the user to download the public data to reproduce analyses and figures. The “Scripts” folder contains all scripts used in the analyses that were not part of running StreamMetabolizer. Lastly, the “Stream_Metabolizer” folder contains all files associated with running StreamMetabolizer including (1) model input files, (2) model output files, (3) processing scripts, (4) histogram plots of the outputs, and (5) an R project. All files are .csv, .pdf, .R, .Rmd, .Rproj, .html, .png, .txt, .qgz, .cpg, .dbf, .prj, .shp, .shp.ea.iso.xml, .shp.iso.xml, .shx, .sbn. ta package can be found at either link. We acknowledge the Yakama Nation as owners and caretakers of the lands where we collected these data. We thank the Confederated Tribes and Bands of the Yakama Nation Tribal Council and Yakama Nation Fisheries for working with us to facilitate sample collection and optimization of data usage according to their values and worldview.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Causal relationships of vegetation productivity with root zone water availability and atmospheric dryness at the catchment scale

Abstract. This study explores the causal relationships between catchment water availability, vapor pressure deficit, and gross primary productivity (GPP) across 341 catchments in the contiguous US. Seasonal climatic, hydrological, and vegetation characteristics were represented using the Horton index, ecological aridity index, evaporative fraction index, and carbon uptake efficiency. Statistical methods, including circularity statistics, correlation analysis, and causality tests, were employed to determine the complex interactions between catchment wetness, atmospheric dryness, and vegetation carbon uptake. The results revealed a maximum lag of 2 months in the intra-annual variability of catchment water supply–productivity and atmospheric water demand–productivity relationships, with hysteresis patterns varying with the catchment's hydrological characteristics. In catchments not permanently under water-limited or energy-limited conditions, vegetation experiences hydrological stress during the peak growing period, coinciding with the highest gross primary productivity and carbon uptake efficiency being out of phase with the Horton index and in phase with the evaporative fraction index. Causality analysis highlights strong temporal continuity in GPP seasonal characteristics, with a cause–effect relationship between catchment water supply, atmospheric demand, and vegetation productivity spanning a maximum of 2 months. These findings underscore the need for a comprehensive functional framework that integrates catchment water supply, atmospheric demand, and vegetation productivity to enhance our understanding and predictive capabilities with regard to ecosystem responses to climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Interactions Between Climate Mean and Variability Drive Future Agroecosystem Vulnerability

ABSTRACT Agriculture is crucial for global food supply and dominates the Earth's land surface. It is unknown, however, how slow but relentless changes in climate mean state, versus random extreme conditions arising from changing variability , will affect agroecosystems' carbon fluxes, energy fluxes, and crop production. We used an advanced weather generator to partition changes in mean climate state versus variability for both temperature and precipitation, producing forcing data to drive factorial‐design simulations of US Midwest agricultural regions in the Energy Exascale Earth System Model. We found that an increase in temperature mean lowers stored carbon, plant productivity, and crop yield, and tends to convert agroecosystems from a carbon sink to a source, as expected; it also can cause local to regional cooling in the earth system model through its effects on the Bowen Ratio. The combined effect of mean and variability changes on carbon fluxes and pools was nonlinear, that is, greater than each individual case. For instance, gross primary production reduces by 9%, 1%, and 13% due to change in mean temperature, change in temperature variability, and change in both temperature mean and variability, respectively. Overall, the scenario with change in both temperature and precipitation means leads to the largest reduction in carbon fluxes (−16% gross primary production), carbon pools (−35% vegetation carbon), and crop yields (−33% and −22% median reduction in yield for corn and soybean, respectively). By unambiguously parsing the effects of changing climate mean versus variability and quantifying their nonadditive impacts, this study lays a foundation for more robust understanding and prediction of agroecosystems' vulnerability to 21st‐century climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Empirical Dynamic Modeling Reveals Complexity of Methane Fluxes in a Temperate Salt Marsh

Abstract Methane dynamics within salt marshes are complex because vegetation types, temperature, oscillating water levels, and changes in salinity and redox conditions influence CH 4 production, consumption, oxidation, and emissions. These non‐linear and complex interactions among variables affect the traditionally expected functional relationships and present challenges for interpreting and developing process‐based models. We employed empirical dynamic modeling (EDM) and convergent cross mapping (CCM) as a novel approach for characterizing seasonal/multiday and diurnal CH 4 dynamics by inferring causal variables, lags, and interconnections among multiple biophysical variables within a temperate salt marsh using 5 years of eddy covariance data. EDM/CCM is a nonparametric approach capable of quantifying the coupling between variables while determining time scales where variable interactions are the most relevant. We found that gross primary productivity, tidal creek dissolved oxygen, and temperature were important for seasonal/multiday dynamics (rho = 0.73–0.80), while water level was most important for diurnal dynamics during both the growing and dormancy phenoperiods (rho = 0.72 and 0.56, respectively). Lags for the top‐ranked variables (i.e., gross primary productivity, dissolved oxygen, temperature, water level) occurred between 1 and 5 weeks at the seasonal scale and 1–24 hr at the diurnal scale. The EDM had high prediction capabilities for intra‐/inter‐seasonal patterns and annual CH 4 sums but had limitations in representing large, infrequent fluxes. Results highlight the importance of non‐linearity, drivers, lag times, and interconnections among multiple biophysical variables that regulate CH 4 fluxes in tidal wetlands. This research introduces a novel approach to examining CH 4 fluxes, which will aid in evaluating current paradigms in wetlands and other ecosystems.

Environmental Sciences & Ecology↗
DOE OSTI2024

Quantifying Seasonal and Diurnal Cycles of Solar‐Induced Fluorescence With a Novel Hyperspectral Imager

Abstract Solar‐induced fluorescence (SIF) is a proxy of ecosystem photosynthesis that often scales linearly with gross primary productivity (GPP) at the canopy scale. However, the mechanistic relationship between GPP and SIF is still uncertain, especially at smaller temporal and spatial scales. We deployed a ultra‐hyperspectral imager over two grassland sites in California throughout a soil moisture dry down. The imager has high spatial resolution that limits mixed pixels, enabling differentiation between plants and leaves within one scene. We find that imager SIF correlates well with diurnal changes in leaf‐level physiology and gross primary productivity under well‐watered conditions. These relationships deteriorate throughout the dry down event. Our results demonstrate an advancement in SIF imaging with new possibilities in remotely sensing plant canopies from the leaf to the ecosystem. These data can be used to resolve outstanding questions regarding SIF's meaning and usefulness in terrestrial ecosystem monitoring.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

Accounting for Changes in Radiation Improves the Ability of SIF to Track Water Stress-Induced Losses in Summer GPP in a Temperate Deciduous Forest

Global observations of solar-induced chlorophyll fluorescence (SIF) are available from multiple satellite platforms, and SIF is increasingly used as a proxy for photosynthetic activity and ecosystem productivity. Because the relationship between SIF and gross primary productivity (GPP) depends on a variety of factors including ecosystem type and environmental conditions, it is necessary to study SIF observations across various spatiotemporal scales and ecosystems. To explore how SIF signals relate to productivity over a temperate deciduous forest, we deployed a PhotoSpec spectrometer system at the University of Michigan Biological Station AmeriFlux site (US-UMB) in the northern Lower Peninsula of Michigan during the 2018 and 2019 growing seasons. We found that SIF correlated with GPP across diurnal and seasonal cycles (R 2 = 0.61 and 0.64 for 90-min- and daily-averaged data), but that SIF signals were more strongly related to downwelling radiation than GPP (R 2 = 0.91 for daily-averaged data). The dependence of SIF on radiation obscured the impact of intraseasonal drought in the SIF timeseries, but drought stress was apparent as a decrease in relative SIF, which exhibited a stronger correlation with GPP (R 2 = 0.56) than other remotely sensed data over the drought period. These results highlight the potential of SIF for detecting stress-induced losses in forest productivity. Additionally, we found that the red:far-red SIF ratio did not exhibit a response to water stress-induced losses in productivity, but was largely driven by seasonal and interannual changes in canopy structure, as well as by synoptic changes in downwelling radiation.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Data for Impact of Vertical and Seasonal Variation in Leaf Traits on Simulating Soybean Canopy Photosynthesis via 1D and 3D Modeling

Accurate modeling of photosynthesis is crucial for predicting crop productivity and quantifying the carbon cycle in agroecosystems. Leaf traits are essential inputs for modeling canopy photosynthesis. Yet, many existing models still use fixed plant functional type (PTF)-based values to parameterize leaf traits under a big-leaf or two-big-leaf assumption, neglecting their vertical profiles and seasonal changes. This simplification may introduce significant uncertainties in estimating gross primary productivity (GPP). In this study, we simulated soybean GPP and tested the effects of vertical and seasonal variation in three key leaf photosynthetic traits: the maximum carboxylation rate at 25 °C (Vcmax25), leaf chlorophyll content (LCC), and leaf mass per area (LMA) in the 1D-SCOPE and 3D-Helios models. Weekly field measurements were conducted during the growing season of 2024 to support the simulation. We designed ten leaf trait parameterization schemes by incorporating different combinations of vertical profiles and seasonal changes, while assuming homogeneous canopy architecture in both models. Our results revealed that Vcmax25 vertical and seasonal variation had the strongest influence on simulated GPP in both 1D and 3D models, while LCC and LMA effects were minimal. Particularly, the scheme with an empirically parameterized Vcmax25 profile achieved comparable performance to the scheme with the measured Vcmax25 profile. Both 1D-SCOPE and 3D-Helios accurately modeled GPP (SCOPE: R2 = 0.87, Bias = 0.55 µmol m⁻² s⁻¹; Helios: R2 = 0.9, Bias = 0.22 µmol m⁻² s⁻¹) under the most complex scheme, and their responses to vertical and seasonal variation in leaf traits were consistent, demonstrating the robustness of our findings. Based on our findings, we propose a scalable framework for parameterizing leaf traits to improve GPP simulations. This study contributes to improving the representation of leaf trait dynamics in canopy-level photosynthesis models, potentially enhancing our ability to predict crop productivity and understand agroecosystem carbon dynamics.

Photosynthesis↗
DOE OSTI2019

Increasing impacts of extreme droughts on vegetation productivity under climate change

Terrestrial gross primary production (GPP) is the basis of food production and vegetation growth globally1 and plays a critical role in regulating atmospheric CO2 through its impact on ecosystem carbon balance. Even though higher CO2 concentrations in future decades can increase GPP2, low soil water availability, heat stress and disturbances associated with droughts could reduce the benefits of such CO2 fertilization. Here we analysed outputs of 13 Earth system models to show an increasingly stronger impact on GPP by extreme droughts than by mild and moderate droughts over the twenty-first century. Due to a dramatic increase in the frequency of extreme droughts, the magnitude of globally averaged reductions in GPP associated with extreme droughts was projected to be nearly tripled by the last quarter of this century (2075–2099) relative to that of the historical period (1850–1999) under both high and intermediate GHG emission scenarios. By contrast, the magnitude of GPP reduction associated with mild and moderate droughts was not projected to increase substantially. Our analysis indicates a high risk of extreme droughts to the global carbon cycle with atmospheric warming; however, this risk can be potentially mitigated by positive anomalies of GPP associated with favourable environmental conditions.

Xu, Chonggang↗