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DOE OSTI2024

Exaggerated Plurivory of Macrophomina phaseolina : Accounting for the Large Host Range Claim and the Shifting of Scientific Language

Macrophomina phaseolina is a plant pathogenic fungus that is frequently described as having a broad host range encompassing more than 500 species. We noticed that citations provided in support of this statement do not actually demonstrate such a broad host range. To elucidate the true documented host range of this fungus, we initiated a literature meta-analysis of 894 publications on M. phaseolina since 1913. We discovered that the first host range summaries did not require Koch's postulates or other experimental demonstrations of pathogenicity. Most of the available early host claims were based on tenuous associations between the fungus and symptoms, sometimes without reporting isolation or morphological examination in vitro. These statements apparently led to a pattern of increasingly exaggerated host range claims, without support from a primary reference, until the claim that M. phaseolina has 500 hosts became common in the early 2000s. At present, the scientific community typically requires Koch's postulates to characterize pathogenicity on a new host. Among all the available literature, we only found primary experimental evidence for M. phaseolina’s pathogenicity on 97 hosts; 74 hosts confirmed by Koch's postulates and 23 hosts with all steps from Koch's postulates completed except for recovery of the pathogen from symptomatic tissues. This study demonstrates how scientific concepts can change over time and necessitate changes to historic axioms. We propose that the hyperbole surrounding the host range of M. phaseolina has obscured an accurate depiction of its biology.

Plant Sciences↗

NASA NTRS2016

International Research Results and Accomplishments From the International Space Station - A New Compilation

In 2016, the International Space Station (ISS) partnership published the first-ever compilation of international ISS research publications resulting from research performed on the ISS through 2011 (Expeditions 0 through 30). International Space Station Research Accomplishments: An Analysis of Results. From 2000-2011 is a collection of over 1,200 journal publications that describe ISS research in the areas of biology and biotechnology; Earth and space science; educational activities and outreach; human research; physical sciences; technology development and demonstration; and, results from ISS operations. This paper will summarize the ISS results publications obtained through 2011 on behalf of the ISS Program Science Forum that is made up of senior science representatives across the international partnership. NASA's ISS Program Science office maintains an online experiment database (www.nasa.gov/iss- science) that tracks and communicates ISS research activities across the entire ISS partnership, and it is continuously updated by cooperation and linking with the results tracking activities of each partner. It captures ISS experiment summaries and results and includes citations to the journals, conference proceedings, and patents as they become available. This content is obtained through extensive and regular journal and patent database searches, and input provided by the ISS international partners ISS scientists themselves. The International Space Station Research Accomplishments: An Analysis of Results From 2000-2011 is a testament to the research that was underway even as the ISS laboratory was being built. It rejects the scientific knowledge gained from ISS research, and how it impact the fields of science in both space and traditional science disciplines on Earth. Now, during a time when utilization is at its busiest, and with extension of the ISS through at least 2024, the ISS partners work together to track the accomplishments and the new knowledge gained in a way that will impact humanity like no laboratory on Earth. Examples of the highest pro le publications to date from each discipline will also be presented. As ISS research activities and operations continue, scientific data derived from earlier experiments will continuously be re-examined, refined, and assembled with new data and findings, including data from other fields never considered. New results will be produced, allowing breakthroughs in new areas of research and innovative solutions to problems on Earth. The ISS Program Science Forum will continue to capture and report on these results in the form of journal publications, conference proceedings, and patents. We anticipate that successful ISS research will continue to contribute to the science literature in a way that helps to formulate new hypotheses and conclusions that will enable science advancements across a wide range of scientific disciplines both in space and on Earth.

Ruttley, Tara↗

DOE OSTI2022

Bibliometric review and recent advances in total scattering pair distribution function analysis: 21 years in retrospect

Global research activities have been driven by the quest to develop and characterize novel materials for technological advancements. The total scattering pair distribution function (TSPDF) is a powerful and versatile characterization technique for examining the structural details of diverse complex materials including liquid, amorphous, disordered crystalline, and nanostructured materials. Thus, it is critical to keep track of research progress, identify research gaps, and future research directions of the application of the TSPDF technique in materials development and discovery. In this work, a bibliometric analysis of literature regarding the TSPDF technique between 2000 and 2021 was conducted using datasets retrieved from the Web of Science database. The research trends based on publication outputs, research subject distribution, co-authorships among institutions, countries/regions, co-citation of referenced sources, and keyword co-occurrence are evaluated and discussed herein. The impact of the TSPDF technique is projected to increase due to its importance in probing emerging functional materials, and the advances in specialized facilities and instrumentation among the scientific communities engaged with it. Finally, current and emerging research hotspots related to TSPDF technique such as catalysis, computer modeling and simulation, pharmaceutics, machine learning, hydrogen storage, battery materials, and layered structured materials are also identified and discussed.

36 MATERIALS SCIENCE↗

DOE OSTI2025

Design and Construction of a High-Resolution Hodoscope for the GlueX Experiment with High-Statistics Analysis of the p0, ¿, and ¿1 Photoproduction Cross Sections from the RadPhi Experiment

Differential cross sections for forward-angle photoproduction of p0, ¿, and ¿ 1 pseudoscalar mesons were measured using data from the RadPhi experiment conducted in Hall B at Jef ferson Lab. RadPhi utilized a tagged bremsstrahlung photon beam incident on a stationary 9Be target, with a detector system configured to trigger on a recoil proton in coincidence with multiple neutral showers in the calorimeter. Events were reconstructed and subjected to kinematic constraints, with background suppressed via sideband subtraction guided by Monte Carlo modeling of background contributions. Cross sections were extracted over the photon energy range 4.4– 5.4 GeV and binned in invariant momentum transfer t, providing measurements from one of the first high-statistics experiments of forward ¿ and ¿1 pro duction from a nuclear target at these energies. Acceptance corrections were applied using a detailed GEANT-based simulation of the detector geometry and response. The resulting cross sections are consistent with 2020 CLAS results, when scaled by the number of protons in beryllium, and show broad agreement with other data and theoretical models. In parallel, a high-resolution photon tagger detector, the Tagger Microscope (TAGM), was designed, constructed, and commissioned for the GlueX experiment in Hall D at Jefferson Lab. The TAGM was developed to provide high-rate tagging capability in the coherent bremsstrahlung peak by detecting post-bremsstrahlung electrons across a one GeV range along the focal plane of the tagging spectrometer. The detector consists of a 5ˆ102 array of 2ˆ2 mm2 square BCF-20 plastic scintillating fibers thermally fused to BCF-98 light guide fibers optically coupled to silicon photomultipliers. These fibers are mounted in a precision machined framework enabling fine positional adjustments to maintain precise alignment with post-bremsstrahlung electron trajectories, while ensuring mechanical rigidity, thermal stability, optical isolation, minimal inactive area, and radiation shielding for electronics. The construction effort involved extensive testing of fiber quality, light transmission, thermal fusing, radiation hardness, and defect analysis using SEM and EDX techniques. Following its installation and commissioning, the TAGM became a critical component of the GlueX beamline, enabling high-rate tagging essential for studies of hybrid mesons and gluonic ex citations.

McIntyre, James [Univ. of Connecticut, Storrs, CT ↗

NASA NTRS1975

Fracture toughness testing data. A bibliography

This bibliography is comprised of approximately 800 reference citations related to the mechanics of failure in aerospace structures. Most of the references are for documents that include fracture toughness testing data and its application or documents on the availability and usefulness of fracture mechanics analysis methodology. The bibliography represents a search of the literature published in the period April 1962 through April 1974 and is largely limited to documents published in the United States.

Carpenter, J. L., Jr.↗

NASA NTRSDate not supplied

Developing a Vision for Maturing the Heliophysics Infrastructure towards Open Science: The DIARieS Analysis Ecosystem

In the dawn of open science and the upcoming requirements, we speak about the existing state of Heliophysics infrastructure and detail the evolution required to address capability or interconnection shortcomings. Such a daunting barrier calls for an analysis ecosystem with multi-faceted capability. We propose such an ecosystem, called DIARieS, to be built upon five conceptual pillars: Discovery, Implementation, Analysis, Reproducibility, and Sharing of results. The combination of these concepts in a single platform will enable users to more intuitively combine recent advances in technology to create ‘DIARieS’ of their workflows, which can be easily made open to others in the community. The DIARieS ecosystem will also increase our efficiency by streamlining our various workflow processes, including automatic incorporation of the impending requirements of open science. The various components of the ecosystem will simplify software installation and data implementation, including automatically generated citation lists based on the components included. Automatic containerization and version control of the ecosystem will make the custom workflows easily reproducible. Employing widget technology will ease the difficulty of producing publication and commercial quality visualizations and applying common analyses techniques. Incorporating multiple technologies will streamline the various sharing methods common in our work environments today. Overall, the totality of capabilities to be offered by this analysis ecosystem will drastically simplify the application of open science principles to our work in addition to improving our efficiency and ease of collaboration. This talk summarizes a vision of the proposed ecosystem, which is described in more detail in Ringuette et al. (2022: https://doi.org/10.1016/j.asr.2022.05.012).

infrastructure↗

NASA NTRSDate not supplied

Developing a Vision for Maturing the Heliophysics Infrastructure towards Open Science

Infrastructure↗

NASA NTRS2003

Preliminary Analysis and Simulations of July 23rd Extended Anvil Case

A key focus of CRYSTAL-FACE (Cirrus Regional Study of Tropical Anvils and cirrus Layers - Florida Area Cirrus Experiment) was the generation and subsequent evolution of cirrus outflow from deep convective cloud systems. A preliminary integrated look at the observations of an extended cirrus anvil cloud system observed on 23 July 2002 will be presented, including lidar and millimeter radar observations from NASA's ER-2 and in- situ observations from NASA's WB-57 and University of North Dakota Citation. The observations will be compared to preliminary results of simulations using 1-D and 2-D high-resolution (100 meter) cloud resolving models. The CRMs explicitly account for cirrus microphysical development by resolving the evolving ice crystal size distribution (bin model) in time and space. Both homogeneous and heterogeneous nucleation are allowed in the model. The CRM simulations are driven using the output of regional simulations using MM5 that produces deep convection similar to what was observed. The MM5 model employs a 2 km inner grid (32 layers) over a 360 km domain, nested within a 6 km grid over a 600 km domain. Initial and boundary conditions for the 36- hour MM5 simulation are taken from NCEP Eta model analysis at 32 km resolution. Key issues to be explored are the settling of the observed anvil versus the model simulations, and comparisons of dynamical properties, such as vertical motions, occurring in the observations and models. The former provides an integrated measure of the validity of the model microphysics (fallspeed) while the latter is the key factor in forcing continued ice generation.

Lin, R.-F.↗

DOE OSTI2022

New Industry Partnerships: Solar Energy Technologies Office Support for Early Projects in the Energy Systems Integration Facility: An Agreement Closeout Summary Report

The U.S. Department of Energy (DOE) Office of Energy Efficiency and Renewable Energy (EERE) Solar Energy Technologies Office (SETO)-funded New Industry Partnerships (NIPs) agreement established multiple new cooperative research projects with industry partners. Each project demonstrated the use of the National Renewable Energy Laboratory's Energy Systems Integration Facility (ESIF) as a national asset for research and development, testing, and validation of new technologies to support high penetrations of solar energy on the electric grid. The agreement was launched in 2013 and represented the SETO portion of the DOE EERE-wide Integrated Network Testbed for Energy Grid Research and Technology Experimentation (INTEGRATE) program. The focus of INTEGRATE was on multi-energy system testing and on testing the interactions of energy systems with information technology, communications, and telecommunications (ICT) systems. The NIPs agreement was a bit different from traditional research projects because it was specifically structured to enable partnerships for ESIF testing and as such required at least a 1:1 funds-in cost share from industry partners. In the end, the project engaged six different industry partnerships and resulted in testing a large number of innovative technologies. These included tiny inverters; power-to-gas technologies; and advanced simulation, analysis, and power-hardware-in-the-loop testing techniques. The agreement also provided significant impact for both research and industrial communities. This summary report provides a brief, high-level overview of these projects and their highlights along with lists of citations and other impacts. Readers are referred to the corresponding project reports for more in-depth information.

14 SOLAR ENERGY↗

DOE OSTI2026

REFSafE: A RAG-Enabled Framework for Predictive Risk Analysis and Automated Safety Report Generation in Mission-Critical Environments

Operational safety in mission-critical environments requires AI systems that are accurate, interpretable, and resistant to hallucination. We present an agentic Retrieval-Augmented Generation (RAG) framework, REFSafe, for grounded hazard analysis and automated safety report generation. The system integrates Large Language Models (LLMs) with structured operational data, historical incident repositories, policy documents, and external authoritative sources. Through iterative agentic reasoning, the framework retrieves, verifies, and synthesizes evidence prior to generation, enforcing citation-backed outputs with explicit source attribution (documents, links, and prior events) to ensure traceability and trust. To mitigate hallucinations and unsupported claims, all risk assessments and forecasts are constrained to retrieved evidence, with confidence signals derived from retrieval relevance and source consistency. A transparent pipeline enables subject matter experts (SMEs) to validate predictions, and provide structured feedback, forming a continuous performance calibration loop. Preliminary deployment demonstrates improved reliability in hazard detection and safety/vulnerability report generation. This work advances trustworthy, evidence-grounded AI for predictive safety intelligence in mission-critical operations.

Das, Sanjay [ORNL] (ORCID:0009000542591915)↗

NASA NTRS2003

CRYSTAL-FACE Analysis and Simulations of the July 23rd Extended Anvil Case

A key focus of CRYSTAL-FACE (Cirrus Regional Study of Tropical Anvils and cirrus Layers - Florida Area Cirrus Experiment) was the generation and subsequent evolution of cirrus outflow from deep convective cloud systems. Present theoretical background and motivations will be discussed. An integrated look at the observations of an extended cirrus anvil cloud system observed on 23 July 2002 will be presented, including lidar and millimeter radar observation; from NASA s ER-2 and in-situ observations from NASA s WB-57 and University of North Dakota Citation. The observations will be compared to results of simulations using 1-D and 2-D high-resolution (100 meter) cloud resolving models. The CRMs explicitly account for cirrus microphysical development by resolving the evolving ice crystal size distribution (bin model) in time and space. Both homogeneous and heterogeneous nucleation are allowed in the model. The CRM simulations are driven using the output of regional simulations using MM5 that produces deep convection similar to what was observed. The MM5 model employs a 2 km inner grid (32 layers) over a 360 km domain, nested within a 6-km grid over a 600-km domain. Initial and boundary conditions for the 36-hour MM5 simulation are taken from NCEP Eta model analysis at 32 km resolution. Key issues to be explored are the settling of the observed anvil versus the model simulations, and comparisons of dynamical properties, such as vertical motions, occurring in the observations and models. The former provides an integrated measure of the validity of the model microphysics (fallspeed) while the latter is the key factor in forcing continued ice generation.

Starr, David↗

NASA NTRS2000

Probabilistic Risk Assessment: A Bibliography

Probabilistic risk analysis is an integration of failure modes and effects analysis (FMEA), fault tree analysis and other techniques to assess the potential for failure and to find ways to reduce risk. This bibliography references 160 documents in the NASA STI Database that contain the major concepts, probabilistic risk assessment, risk and probability theory, in the basic index or major subject terms, An abstract is included with most citations, followed by the applicable subject terms.

Source record↗

NASA NTRS2004

[CO2 Budget and Atmospheric Rectification (COBRA) Over North America]

The purpose of the CO2 Budget and Rectification Airborne (COBRA) study was to assess terrestrial sources and sinks of carbon dioxide using an air-borne study. The study was designed to address the measurement gap between plot-scale direct flux measurements and background hemispheric-scale constraints and to refine techniques for measuring terrestrial fluxes at regional to continental scales. The initial funded effort (reported on here) was to involve two air-borne campaigns over North America, one in summer and one in winter. Measurements for COBRA (given the acronym C02BAR in the initial proposal) were conducted from the University of North Dakota Citation 11, a twin-engine jet aircraft capable of profiling from the surface to 12 km and cruising for up to 4 hours and 175m/s. Onboard instrumentation measured concentrations of CO2, CO, and H2O, and meteorological parameters at high rates. In addition, two separate flask sampling systems collected discrete samples for laboratory analysis of CO2,CO, CH4, N2O, SF6, H2, 13CO2, C18O16O,O2/N2, and Ar/N2. The project involved a collaboration between a number of institutions, including (but not limited to) Harvard, NOAA-CMDL, the University of North Dakota, and Scripps.

Source record↗

NASA NTRS2003

A Multi-Use Airborne Research Facility

Much of our progress in understanding the Earth system comes from measurements made in the atmosphere. Aircraft are widely used to collect in situ measurements of the troposphere and lower stratosphere, and they also serve as platforms for many remote sensing instruments. Airborne field measurement campaigns require a capable aircraft, a specially trained support team, a suite of basic instrumentation, space and power for new instruments, and data analysis and processing capabilities (e.g. Veal et al., 1977). However, these capabilities are expensive and there is a need to reduce costs while maintaining the capability to perform this type of research. To this end, NASA entered a Cooperative Agreement with the University of North Dakota (UND) to help support the operations of the UND Cessna Citation research aircraft. This Cooperative Agreement followed in form and substance a previous agreement. The Cooperative Agreement has benefited both NASA and UND. In part because of budget reductions, the NASA Airborne Science Office has elected to take advantage of outside operators of science research platforms to off-load some science requirements (Huning, 1996). UND has worked with NASA to identify those requirements that could be met more cost effectively with the UND platform. This has resulted in significant cost savings to NASA while broadening the base of researchers in the NASA science programs. At the same time, the Agreement has provided much needed support to UND to help sustain the Citation research facility. In this report, we describe the work conducted under this Cooperative Agreement.

Poellot, Michael R.↗

DOE OSTI2024

CyanoCyc cyanobacterial web portal

CyanoCyc is a web portal that integrates an exceptionally rich database collection of information about cyanobacterial genomes with an extensive suite of bioinformatics tools. It was developed to address the needs of the cyanobacterial research and biotechnology communities. The 277 annotated cyanobacterial genomes currently in CyanoCyc are supplemented with computational inferences including predicted metabolic pathways, operons, protein complexes, and orthologs; and with data imported from external databases, such as protein features and Gene Ontology (GO) terms imported from UniProt. Five of the genome databases have undergone manual curation with input from more than a dozen cyanobacteria experts to correct errors and integrate information from more than 1,765 published articles. CyanoCyc has bioinformatics tools that encompass genome, metabolic pathway and regulatory informatics; omics data analysis; and comparative analyses, including visualizations of multiple genomes aligned at orthologous genes, and comparisons of metabolic networks for multiple organisms. CyanoCyc is a high-quality, reliable knowledgebase that accelerates scientists’ work by enabling users to quickly find accurate information using its powerful set of search tools, to understand gene function through expert mini-reviews with citations, to acquire information quickly using its interactive visualization tools, and to inform better decision-making for fundamental and applied research.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS1993

Remote sensing of multilevel clouds during FIRE IFO 2

An unresolved difficulty in the remote sensing of clouds concerns the inability of the cloud retrieval algorithms to adequately recognize and analyze scenes containing overlapping cloud layers. Most cloud retrieval schemes, such as that used by the International Satellite Cloud Climatology Project (ISCCP) assume that each picture element (pixel) contains a single cloud layer. The current study begins to address the complexities of multilayered cloud property retrieval through the application of a modified multispectral, multiresolution (MSMR) method, first detailed in Baum et al. (1992), which merges 1.1 -km (at nadir) spectral data from the Advanced Very High Resolution Radiometer (AVHRR) with 17.4-km (at nadir) High Resolution Infrared Radiometer Sounder (HIRS/2, henceforth HIRS). Both instruments are flown aboard the National Oceanic and Atmospheric Administration (NOAA) polar-orbiting platforms. An ideal case study for this investigation is provided by the NOAA-11 overpass at 20:48 UTC on November 28, 1991. At this time, a large-scale cirrostratus veil overlaid a low-level stratus deck over much of the IFO region. There were both surface lidar and radar observations of the clouds as well as University of North Dakota (UND) Citation aircraft measurements. The presence of overlapping cloud layers within a HIRS FOV is determined from colocated AVHRR spectral data through the use of a fuzzy logic expert system. Conventional algorithms such as spatial coherence and CO2 slicing are used to retrieve cloud pressure and height for each identified cloud layer. The results from the satellite cloud retrieval analysis are compared to results from both surface- and aircraft-based measurements.

Baum, Bryan A.↗

NASA NTRS1991

Advanced Satellite Research Project: SCAR Research Database. Bibliographic analysis

The literature search was provided to locate and analyze the most recent literature that was relevant to the research. This was done by cross-relating books, articles, monographs, and journals that relate to the following topics: (1) Experimental Systems - Advanced Communications Technology Satellite (ACTS), and (2) Integrated System Digital Network (ISDN) and Advance Communication Techniques (ISDN and satellites, ISDN standards, broadband ISDN, flame relay and switching, computer networks and satellites, satellite orbits and technology, satellite transmission quality, and network configuration). Bibliographic essay on literature citations and articles reviewed during the literature search task is provided.

Pelton, Joseph N.↗

NASA NTRS1993

Meteorological analysis of the November 25 FIRE cirrus-2 case: A well-defined ridge-crest cirrus system over Oklahoma

On the morning of 25 Nov. 1991, a cirrus cloud system formed in a region extending eastward from the continental divide into central Oklahoma and southwestern Kansas. The system moved slowly eastward during the day and maintained a relatively constant scale and shape. From the satellite perspective, this cloud system had a number of morphological similarities to the 27-28 Oct. FIRE (First International Satellite Cloud Climatology Project Regional Experiment) Cirrus-1 case analyzed by Starr and Wylie. By comparison, the present case had much better rawinsonde coverage. The rawinsonde network was much more extensive and the cloud system was relatively slow moving and well-located with respect to the enhanced sounding network and the National Weather Service (NWS) Wind Profiler Network. In addition to the rawinsonde soundings (1200 and 1800 UTC on 25 Nov. and 0000 and 0600 UTC on 26 Nov.) and satellite observations, four aircraft sorties were flown in the northern portion of this cirrus cloud system from mid-morning to mid afternoon. These included microphysical-radiation profiling missions by the NCAR Sabreliner near Tulsa (about midway between COF and OUN) and the NCAR King Air near Ponca City (about 80 km upwind of Tulsa), a microphysical profiling mission by the UND Citation near Tulsa, and a NASA ER-2 overflight. Thus, very good data are available for this case although, unfortunately, the cloud system remained south of the FIRE Hub site at Coffeyville (COF) where extensive ground-based remote sensor was located. The northern edge of the cloud system was visible from COF during most of the day. Given the wealth of available in situ and remote sensing observations, the similarity to the FIRE Cirrus-1 focal case study, and the particularly good match in scale and location of the cloud system with the rawinsonde and profiler networks, analysis of this case may yield very useful results on the life-cycle of this cirrus cloud system. The quality of the meteorological description for this case was assessed based on our preliminary analysis of the rawinsonde observations.

Starr, David↗