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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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48 records · Page 3
All sourcesNASA NTRSDOE OSTI
DOE OSTI2012

Full Core Reactor Analysis: Running Denovo on Jaguar

Fully-consistent, full-core, 3D, deterministic simulations using the orthogonal mesh code Denovo were run on the massively parallel computing architecture Jaguar XT5. Using energy and spatial parallelization schemes, Denovo was able to efficiently scale to over 160k processors. Cell-homogenized cross-sections were used with Step-Characteristics, Linear-Discontinuous Finite Element, and Tri-Linear-Discontinuous Finite Element spatial methods. It was determined that using the finite element methods gave considerably more accurate eigenvalue solutions for large aspect ratios meshes than those using Step-Characteristics.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2012

Lustre at Petascale: Experiences in Troubleshooting and Upgrading

Some veterans in the HPC industry semi-facetiously define supercomputers as devices that convert compute-bound problems into I/O-bound problems. Effective utilization of large high performance computing resources often requires access to large amounts of fast storage. The National Institute for Computational Sciences (NICS) operates Kraken, a 1.17 PetaFLOPS Cray XT5 for the National Science Foundation (NSF). Kraken s primary file system has migrated from Lustre 1.6 to 1.8 and is currently being moved to servers external to the machine. Additional bandwidth will be made available by mounting the NICS-wide Lustre file system. Newer versions of Lustre, beyond what Cray provides, are under evaluation for stability and performance. Over the past several years of operation, Kraken s Lustre file system has evolved to be extremely stable in an effort to better serve Kraken s users.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2012

A Next-Generation Parallel File System Environment for the OLCF

When deployed in 2008/2009 the Spider system at the Oak Ridge National Laboratory s Leadership Computing Facility (OLCF) was the world s largest scale Lustre parallel file system. Envisioned as a shared parallel file system capable of delivering both the bandwidth and capacity requirements of the OLCF s diverse computational environment, Spider has since become a blueprint for shared Lustre environments deployed worldwide. Designed to support the parallel I/O requirements of the Jaguar XT5 system and other smallerscale platforms at the OLCF, the upgrade to the Titan XK6 heterogeneous system will begin to push the limits of Spider s original design by mid 2013. With a doubling in total system memory and a 10x increase in FLOPS, Titan will require both higher bandwidth and larger total capacity. Our goal is to provide a 4x increase in total I/O bandwidth from over 240GB=sec today to 1TB=sec and a doubling in total capacity. While aggregate bandwidth and total capacity remain important capabilities, an equally important goal in our efforts is dramatically increasing metadata performance, currently the Achilles heel of parallel file systems at leadership. We present in this paper an analysis of our current I/O workloads, our operational experiences with the Spider parallel file systems, the high-level design of our Spider upgrade, and our efforts in developing benchmarks that synthesize our performance requirements based on our workload characterization studies.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2011

Performance of the Community Earth System Model

The Community Earth System Model (CESM), released in June 2010, incorporates new physical process and new numerical algorithm options, significantly enhancing simulation capabilities over its predecessor, the June 2004 release of the Community Climate System Model. CESM also includes enhanced performance tuning options and performance portability capabilities. This paper describes the performance engineering aspects of the CESM and reports performance and performance scaling on both the Cray XT5 and the IBM BG/P for four representative production simulations, varying both problem size and enabled physical processes. The paper also describes preliminary performance results for high resolution simulations using over 200,000 processor cores, indicating the promise of ongoing work in numerical algorithms and where further work is required.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2011

Design and Implementation of Broadcast Algorithms for Extreme-Scale Systems

The scalability and performance of collective communication operations limit the scalability and performance of many scientific applications. This paper presents two new blocking and nonblocking Broadcast algorithms for communicators with arbitrary communication topology, and studies their performance. These algorithms benefit from increased concurrency and a reduced memory footprint, making them suitable for use on large-scale systems. Measuring small, medium, and large data Broadcasts on a Cray-XT5, using 24,576 MPI processes, the Cheetah algorithms outperform the native MPI on that system by 51%, 69%, and 9%, respectively, at the same process count. These results demonstrate an algorithmic approach to the implementation of the important class of collective communications, which is high performing, scalable, and also uses resources in a scalable manner.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2012

Integrated Radiation Transport and Thermo-Mechanics Simulation of a PWR Assembly

The Advanced Multi-Physics (AMP) Nuclear Fuel Performance code (AMPFuel) is focused on predicting the temperature and strain within a nuclear fuel assembly to evaluate the performance and safety of existing and advanced nuclear fuel bundles within existing and advanced nuclear reactors. AMPFuel was extended to include an integrated nuclear fuel assembly capability for (one-way) coupled radiation transport and nuclear fuel assembly thermo-mechanics. This capability is the initial step towards incorporating an improved predictive nuclear fuel assembly modeling capability to accurately account for source terms, such as the neutron flux distribution, coolant conditions, and assembly mechanical stresses, of traditional (single-pin) nuclear fuel performance simulation. AMPFuel was used to model an entire 17 x 17 Pressurized Water Reactor (PWR) fuel assembly with many of the features resolved in three dimensions (for thermo-mechanics and/or neutronics), including the fuel, gap, and cladding of each of the 264 fuel pins, the 25 guide tubes, top and bottom structural regions, and the upper and lower (neutron) reflector regions. The final full-assembly calculation was executed on Jaguar (Cray XT5) at the Oak Ridge Leadership Computing Facility using 40,000 cores in under 10 hours to model over 162 billion degrees of freedom for 10 loading steps.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2011

Real-Time System Log Monitoring/Analytics Framework

Analyzing system logs provides useful insights for identifying system/application anomalies and helps in better usage of system resources. Nevertheless, it is simply not practical to scan through the raw log messages on a regular basis for large-scale systems. First, the sheer volume of unstructured log messages affects the readability, and secondly correlating the log messages to system events is a daunting task. These factors limit large-scale system logs primarily for generating alerts on known system events, and post-mortem diagnosis for identifying previously unknown system events that impacted the systems performance. In this paper, we describe a log monitoring framework that enables prompt analysis of system events in real-time. Our web-based framework provides a summarized view of console, netwatch, consumer, and apsched logs in real- time. The logs are parsed and processed to generate views of applications, message types, individual/group of compute nodes, and in sections of the compute platform. Also from past application runs we build a statistical profile of user/application characteristics with respect to known system events, recoverable/non-recoverable error messages and resources utilized. The web-based tool is being developed for Jaguar XT5 at the Oak Ridge Leadership Computing facility.

Oral, H Sarp↗
DOE OSTI2012

A Tale of Two Systems: Flexibility of Usage of Kraken and Nautilus at the National Institute for Computational Sciences

The National Institute for Computational Sciences (NICS) at the University of Tennessee currently operates two computational resources for the eXtreme Science and Engineering Discovery Environment (XSEDE), Kraken, a 112,896-core Cray XT5 for general purpose computation, and Nautilus, a 1,024-core SGI Altix UV 1000 for data analysis and visualization. We analyze a year's worth of accounting logs for Kraken and Nautilus to understand how users take advantage of these two systems and how analysis jobs differ from general HPC computation We find that researchers take advantage of the flexibility offered by these systems, running a wide variety of jobs at many scales and using the full range of core counts and available memory for their jobs. The jobs on Nautilus tend to use less walltime and more memory per core than the jobs run on Kraken. Additionally, researchers are more likely to run interactive jobs on Nautilus than on Kraken. Small jobs experience a good quality of service on both systems. This information can be used for the management and allocation of time on existing HPC and analysis systems as well as for planning for deploying future HPC and analysis systems.

Szczepanski, Amy F↗
DOE OSTI2014

Simulating Billion-Task Parallel Programs

In simulating large parallel systems, bottom-up approaches exercise detailed hardware models with effects from simplified software models or traces, whereas top-down approaches evaluate the timing and functionality of detailed software models over coarse hardware models. Here, we focus on the top-down approach and significantly advance the scale of the simulated parallel programs. Via the direct execution technique combined with parallel discrete event simulation, we stretch the limits of the top-down approach by simulating message passing interface (MPI) programs with millions of tasks. Using a timing-validated benchmark application, a proof-of-concept scaling level is achieved to over 0.22 billion virtual MPI processes on 216,000 cores of a Cray XT5 supercomputer, representing one of the largest direct execution simulations to date, combined with a multiplexing ratio of 1024 simulated tasks per real task.

Perumalla, Kalyan S↗
DOE OSTI2012

An Analysis of Computational Workloads on the Jaguar Cray XT System

This study presents an analysis of science application workloads for the Jaguar Cray XT5 system during its tenure as a 2.3 petaflop supercomputer at Oak Ridge National Laboratory. Jaguar was the first petascale system to be deployed for open science and has been one of the world's top three supercomputers for six releases of the TOP500 list. Its workload is investigated here as a representative of the growing worldwide install base of petascale systems and also as a foreshadowing of science workloads to be expected for future systems. The study considers characteristics of the Jaguar workload such as resource utilization, typical job characteristics, most heavily used applications, application scaling and application usage patterns. Implications of these findings are considered for current petascale workflows and for exascale systems to be deployed later this decade.

Joubert, Wayne↗
DOE OSTI2012

Full core reactor analysis: Running Denovo on Jaguar

Fully-consistent, full-core, 3D, deterministic neutron transport simulations using the orthogonal mesh code Denovo were run on the massively parallel computing architecture Jaguar XT5. Using energy and spatial parallelization schemes, Denovo was able to efficiently scale to more than 160 k processors. Cell-homogenized cross sections were used with step-characteristics, linear-discontinuous finite element, and trilinear-discontinuous finite element spatial methods. It was determined that using the finite element methods gave considerably more accurate eigenvalue solutions for large-aspect ratio meshes than using step-characteristics. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2011

Collective Framework and Performance Optimizations to Open MPI for Cray XT Platforms

The performance and scalability of collective operations plays a key role in the performance and scalability of many scientific applications. Within the Open MPI code base we have developed a general purpose hierarchical collective operations framework called Cheetah, and applied it at large scale on the Oak Ridge Leadership Computing Facility's Jaguar (OLCF) platform, obtaining better performance and scalability than the native MPI implementation. This paper discuss Cheetah's design and implementation, and optimizations to the framework for Cray XT 5 platforms. Our results show that the Cheetah's Broadcast and Barrier perform better than the native MPI implementation. For medium data, the Cheetah's Broadcast outperforms the native MPI implementation by 93% for 49,152 processes problem size. For small and large data, it out performs the native MPI implementation by 10% and 9%, respectively, at 24,576 processes problem size. The Cheetah's Barrier performs 10% better than the native MPI implementation for 12,288 processes problem size.

99 GENERAL AND MISCELLANEOUS↗