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At least 55 records · Page 3

WA-IsoC_MSC1.1.0

The soil microbiome is central to the cycling of carbon and other nutrients and to the promotion of plant growth. Despite its importance, analysis of the soil microbiome is difficult due to its sheer complexity, with thousands of interacting species. Here, we reduced this complexity by developing model soil microbial consortia that are simpler and more amenable to experimental analysis but still represent important microbial functions of the native soil ecosystem. Samples were collected from an arid grassland soil and microbial communities (consisting mainly of bacterial species) were enriched on agar plates containing chitin as the main carbon source. Chitin was chosen because it is an abundant carbon and nitrogen polymer in soil that often requires the coordinated action of several microorganisms for complete metabolic degradation. Several soil consortia were derived that had tractable richness (30-50 OTUs) with diverse phyla representative of the native soil, including Actinobacteria, Bacteroidetes, Firmicutes, Proteobacteria and Verrucomicrobia. The resulting consortia can be stored as glycerol or lyophilized stocks at -80° C and revived while retaining community composition, greatly increasing their use as tools for the research community at large. One of the consortia that was particularly stable was chosen as a model soil consortium (MSC-1) for further analysis. MSC-1 species interactions were studied using both pairwise co-cultivation in liquid media and during growth in soil under several perturbations. Co-abundance analyses highlighted interspecies interactions and helped to define keystone species, including Mycobacterium, Rhodococcus, and Rhizobiales taxa. These experiments demonstrate the success of an approach based on naturally enriching a community of interacting species that can be stored, revived, and shared. The knowledge gained from querying these communities and their interactions will enable better understanding of the soil microbiome and the roles these interactions play in this environment.

54 ENVIRONMENTAL SCIENCES↗

WA-Omic_LA.1.0 - Quantitative Lipidomics, Metabolomics, and Sequencing (16S/ITS) Publication Data DOI Package

Corresponding Data Publication: "Rapid remodeling of the soil lipidome in response to a drying-rewetting event." This study reveals specific changes in lipids and metabolites that are indicative of stress adaptation, substrate use, and cellular recovery during soil drying and subsequent rewetting. Drought induced nutrient limitation was reflected in the lipidome and polar metabalome, both of which rapidly shifted (within hours) upon rewet. Reduced nutrient access in dry soil caused the replacement of glycerophospholipids with phosphorus-free lipids and impeded resource-expensive osmolyte accumulation. Elevated levels of ceramides and lipids with long chain polyunsaturated fatty acids, in dry soil suggests that lipids play an important role in fungal drought tolerance. Increasing abundance of bacterial glycerophospholipids and triacylglycerols with fatty acids typical of bacteria and polar metabolites suggest metabolic recovery in representative bacteria once the environmental conditions are conducive for growth. These results underscore the importance of the soil lipidome as a robust indicator of microbial community responses, especially at the short time scales of cell-environment reactions. Data package contents reported here are the first version and contain pre- and post-processed data acquisition and subsequent downstream analysis files using various data source instrument method techniques and Mass Spectroscopy (MS) EMSL capabilities. This publication data package DOI is a comprehensive high-throughput multi-omics data lifecycle collection containing processed data method metadata. Support files include additional data download “Read Me” file containing data descriptor information and data source application ontologies (see data dictionary). Reported data download contents are structured for compliance with project data sharing guidelines, community standards initiatives, and sponsor stakeholder policies supporting FAIR data principles. For increased data availability and interoperability, GC-MS/LC-MS mass spectrometry datasets (Thermo .raw ) were deposited at the MassIVE database repository under the related data accession MSV000086931 and can be accessed by using the API. Statistical data processing software, analysis tools, and data workflows are listed below corresponding to the host repository long-term location.

Amplicon sequencing 16S ITS LC-MS/MS lipidomics mu↗

WA-Omic_LA.1.0 - Quantitative Lipidomics, Metabolomics, and Sequencing (16S/ITS) Publication Data DOI Package

Corresponding Data Publication: "Rapid remodeling of the soil lipidome in response to a drying-rewetting event." This study reveals specific changes in lipids and metabolites that are indicative of stress adaptation, substrate use, and cellular recovery during soil drying and subsequent rewetting. Drought induced nutrient limitation was reflected in the lipidome and polar metabalome, both of which rapidly shifted (within hours) upon rewet. Reduced nutrient access in dry soil caused the replacement of glycerophospholipids with phosphorus-free lipids and impeded resource-expensive osmolyte accumulation. Elevated levels of ceramides and lipids with long chain polyunsaturated fatty acids, in dry soil suggests that lipids play an important role in fungal drought tolerance. Increasing abundance of bacterial glycerophospholipids and triacylglycerols with fatty acids typical of bacteria and polar metabolites suggest metabolic recovery in representative bacteria once the environmental conditions are conducive for growth. These results underscore the importance of the soil lipidome as a robust indicator of microbial community responses, especially at the short time scales of cell-environment reactions. Data package contents reported here are the first version and contain pre- and post-processed data acquisition and subsequent downstream analysis files using various data source instrument method techniques and Mass Spectroscopy (MS) EMSL capabilities. This publication data package DOI is a comprehensive high-throughput multi-omics data lifecycle collection containing processed data method metadata. Support files include additional data download “Read Me” file containing data descriptor information and data source application ontologies (see data dictionary). Reported data download contents are structured for compliance with project data sharing guidelines, community standards initiatives, and sponsor stakeholder policies supporting FAIR data principles. For increased data availability and interoperability, GC-MS/LC-MS mass spectrometry datasets (Thermo .raw ) were deposited at the MassIVE database repository under the related data accession MSV000086931 and can be accessed by using the API. Statistical data processing software, analysis tools, and data workflows are listed below corresponding to the host repository long-term location.

Amplicon sequencing 16S ITS LC-MS/MS lipidomics mu↗

WA-TmG.2.0

Soil samples were collected in triplicate in the Fall of 2017 across three grassland locations having differences in historical annual precipitation. For each of the three field site soil collections, one deeply sequenced composite metagenome (> 1 terabase) was obtained and individually sequenced in replicate to provide three additional terabase metagenomes for replicate statistical comparison in addition to screening for viral soil contigs for assessing the impact of historical annual precipitation. This data package provides new knowledge of viral types, abundances, diversity, and auxiliary metabolic genes (AMGs) in grassland soils for predicting viral response to changes in their environment.

59 BASIC BIOLOGICAL SCIENCES↗

B747/JT9D flight loads and their effect on engine running clearances and performance deterioration; BCAC NAIL/P and WA JT9D engine diagnostics programs

Flight loads on the 747 propulsion system and resulting JT9D blade to outer airseal running clearances during representative acceptance flight and revenue flight sequences were measured. The resulting rub induced clearance changes, and engine performance changes were then analyzed to validate and refine the JT9D-7A short term performance deterioration model.

Olsson, W. J.↗

Annual Conference on Nuclear and Space Radiation Effects, 18th, University of Washington, Seattle, WA, July 21-24, 1981, Proceedings

Single event upset phenomena are discussed, taking into account cosmic ray induced errors in IIL microprocessors and logic devices, single event upsets in NMOS microprocessors, a prediction model for bipolar RAMs in a high energy ion/proton environment, the search for neutron-induced hard errors in VLSI structures, soft errors due to protons in the radiation belt, and the use of an ion microbeam to study single event upsets in microcircuits. Basic mechanisms in materials and devices are examined, giving attention to gamma induced noise in CCD's, the annealing of MOS capacitors, an analysis of photobleaching techniques for the radiation hardening of fiber optic data links, a hardened field insulator, the simulation of radiation damage in solids, and the manufacturing of radiation resistant optical fibers. Energy deposition and dosimetry is considered along with SGEMP/IEMP, radiation effects in devices, space radiation effects and spacecraft charging, EMP/SREMP, and aspects of fabrication, testing, and hardness assurance.

Tasca, D. M.↗

Heat transfer in space systems; Proceedings of the Symposium, AIAA/ASME Thermophysics and Heat Transfer Conference, Seattle, WA, June 18-20, 1990

Theoretical and experimental studies of heat-tranfer in a space environment are discussed in reviews and reports. Topics addressed include a small-scale two-phase thermosiphon to cool high-power electronics, a low-pressure-drop heat exchanger with integral heat pipe, an analysis of the thermal performance of heat-pipe radiators, measurements of temperature and concentration fields in a rectangular heat pipe, and a simplified aerothermal heating method for axisymmetric blunt bodies. Consideration is given to entropy production in a shock wave, bubble-slug transition in a two-phase liquid-gas flow under microgravity, plasma arc welding under normal and zero gravity, the Microgravity Thaw Experiment, the flow of a thin film on stationary and rotating disks, an advanced ceramic fabric body-mounted radiator for Space Station Freedom phase 0 design, and lunar radiators with specular reflectors.

Chan, S. H.↗

Cool stars, stellar systems, and the sun; Proceedings of the 6th Cambridge Workshop, Seattle, WA, Sept. 18-21, 1989

The present conference on cool stars, stellar systems, and the sun encompasses stellar chromospheres and coronae, binary stars, the stellar evolution of contracting stars and red giants, stellar evolution abundances of the elements, mass loss and envelopes, and stellar pulsation. Specific issues addressed include theories regarding the acoustic and magnetic heating of stellar chromospheres and coronae, stellar granulation, wave heating in magnetic flux tubes, observations of the solar Ca-II lines, longitudinal-transverse magnetic tube waves in the solar atmosphere, radio emission from rapidly rotating cool giant stars, and spot temperatures and area coverages on active dwarf stars. Also addressed are the optical and UV spectra of RS-CVn stars, emission lines from T-Tauri stars, the spectroscopy of HR1614 group stars, red giants in external galaxies, the rotation of evolved stars, the transition from red giant to planetary nebula, and radiative transfer in the dynamic atmospheres of variable stars.

Wallerstein, George↗

Chapman Conference on the Hydrologic Aspects of Global Climate Change, Lake Chelan, WA, June 12-14, 1990, Selected Papers

The present conference on the hydrological aspects of global climate change discusses land-surface schemes for future climate models, modeling of the land-surface boundary in climate models as a composite of independent vegetation, a land-surface hydrology parameterizaton with subgrid variability for general circulation models, and conceptual aspects of a statistical-dynamical approach to represent landscape subgrid-scale heterogeneities in atmospheric models. Attention is given to the impact of global warming on river runoff, the influence of atmospheric moisture transport on the fresh water balance of the Atlantic drainage basin, a comparison of observations and model simulations of tropospheric water vapor, and the use of weather types to disaggregate the prediction of general circulation models. Topics addressed include the potential response of an Arctic watershed during a period of global warming and the sensitivity of groundwater recharge estimates to climate variability and change.

Lettenmaier, Dennis P.↗

Using Satellite Data to Characterize the Temporal Thermal Behavior of an Active Volcano: Mount St. Helens, WA

ASTER thermal infrared data over Mt. St Helens were used to characterize its thermal behavior from Jun 2000 to Feb 2006. Prior to the Oct 2004 eruption, the average crater temperature varied seasonally between -12 and 6 C. After the eruption, maximum single-pixel temperature increased from 10 C (Oct 2004) to 96 C (Aug 2005), then showed a decrease to Feb 2006. The initial increase in temperature was correlated with dome morphology and growth rate and the subsequent decrease was interpreted to relate to both seasonal trends and a decreased growth rate/increased cooling rate, possibly suggesting a significant change in the volcanic system. A single-pixel ASTER thermal anomaly first appeared on Oct 1, 2004, eleven hours after the first eruption - 10 days before new lava was exposed at the surface. By contrast, an automated algorithm for detecting thermal anomalies in MODIS data did not trigger an alert until Dec 18. However, a single-pixel thermal anomaly first appeared in MODIS channel 23 (4 um) on Oct 13, 12 days after the first eruption - 2 days after lava was exposed. The earlier thermal anomaly detected with ASTER data is attributed to the higher spatial resolution (90 m) compared with MODIS (1 m) and the earlier visual observation of anomalous pixels compared to the automated detection method suggests that local spatial statistics and background radiance data could improve automated detection methods.

Advanced Spaceborne Thermal Emission and Reflectio↗

Bloom Modeling and Prediction of the Harmful Algae Alexandrium in Bellingham Bay, WA

Bellingham, Washington is located near the American-Canadian border in the northwestern part of Washington state, and is bordered on its west side by the Lummi reservation. Between Lummi and Bellingham lies Bellingham bay, which has a history of harmful algae related closures dating back to 1978. The subject of this work is a genus of dinoflagellates: Alexandrium, within which many species have the capacity to produce a suite of toxins known as saxitoxin. These toxins bioaccumulate in bivalves, which in turn cause paralytic shellfish poisoning in marine consumers (mammals, birds, and fish), including humans. Symptoms in humans can range from tingling and numbness to difficulty or inability to breathe, resulting in death. Because of the longstanding history of shellfish gathering among Salish tribes and the fact that Washington is the leading U.S. producer of farmed bivalves, harmful algae blooms impact both native and non-native peoples living in the Salish Sea area negatively. The objective of this work is to identify factors which influence Alexandrium blooms in Bellingham Bay, as well as predict Alexandrium blooms in the future. The method of doing so involves two processes: an initial statistical modeling phase to find in situ and remote sensing observations correlated to bloom density (including, but not limited to: water temperature, chlorophyll-a, salinity, color dissolved organic matter, and discharge rate of local rivers), followed by use of that data as a training set for a recursive neural network. This predictive capacity may inform future closures, help ensure the safety of shellfish consumers, and act as a baseline for future modeling efforts in the region.

Harmful↗

DOE ZERH Case Study: Clifton View Homes, Marine Drive and Port Hadlcok, Coupeville and Port Hadlock WA

Case study of two DOE 2015 Housing Innovation Award winning custom homes in the marine climate that got HERS 39 and 38 without PV or HERS 2-12 and -9 with PV, with 6.5” SIP walls and 10.25” SIP roof; 11.75 ICF around slab, R-20 rigid foam under slab; radiant floor heat and passive design; air-to-water heatpump, fresh air intake with fan, triple-pane windows, 100% LED.

Building America↗

DOE ZERH Case Study: Dwell Development, Reclaimed Modern, Seattle, WA

Case study of a DOE 2015 Housing Innovation Award winning custom home in the cold climate that got a HERS 30 without PV, with 2x8 24” on center walls with blown fiberglass and 4” polysio rigid foam; basement with 2” XPS interior, 4” under slab, 4” exterior of foundation wall; vented attic with R-100 blown cellulose; wo air-to-air heat pumps SEER 14.1; HSPF 9.6; heat pump water heater.

Building America↗

DOE ZERH Case Study: TC Legend Homes, Bellingham Power House, Bellingham, WA

Case study of a DOE 2015 Housing Innovation Award winning custom home in the marine climate that got HERS 34 without PV or HERS -12 with PV, with 6” SIP walls and 10” SIP roof; R-28 ICF around slab, R-20 rigid foam under slab; radiant floor heat and passive design; air-to-water heat pump COP 4.4; HRV; earth tube ventilation; triple-pane windows, 100% LED.

Building America↗