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At least 55 records · Page 3

Two-dimensional nonsteady viscous flow simulation on the Navier-Stokes computer miniNode

The needs of large-scale scientific computation are outpacing the growth in performance of mainframe supercomputers. In particular, problems in fluid mechanics involving complex flow simulations require far more speed and capacity than that provided by current and proposed Class VI supercomputers. To address this concern, the Navier-Stokes Computer (NSC) was developed. The NSC is a parallel-processing machine, comprised of individual Nodes, each comparable in performance to current supercomputers. The global architecture is that of a hypercube, and a 128-Node NSC has been designed. New architectural features, such as a reconfigurable many-function ALU pipeline and a multifunction memory-ALU switch, have provided the capability to efficiently implement a wide range of algorithms. Efficient algorithms typically involve numerically intensive tasks, which often include conditional operations. These operations may be efficiently implemented on the NSC without, in general, sacrificing vector-processing speed. To illustrate the architecture, programming, and several of the capabilities of the NSC, the simulation of two-dimensional, nonsteady viscous flows on a prototype Node, called the miniNode, is presented.

Nosenchuck, Daniel M.↗

Robotic Crane System for the Deconstruction of Chernobyl Unit 4 - 18583

The Chernobyl Nuclear Power Plant (ChNPP) Unit 4 accident occurred on April 26, 1986 leaving a severely damaged reactor building and a highly radioactive area. To minimize the long-term radiological impact to personnel and the environment, Unit 4 was immediately enclosed by a structure named the Object Shelter (OS). To transform the OS into an ecologically safe system, the Shelter Implementation Plan (SIP) was developed in 1997. The most significant SIP tasks was the design and construction of the New Safe Confinement (NSC). The NSC is a 36,000 tonne arch enclosure that includes a suite of process equipment to address the ruins of Unit 4 while assuring the safety of workers, public, and the environment. The NSC has a span of 257 meters, length of 164 meters, and height of 110 meters and is designed for a 100 years life. The New Safe Confinement was slid from its erection area to directly over Unit 4 (a distance of 327 meters) in November 2016. One of the major mechanical handling systems installed in the NSC is the Main Cranes System (MCS), designed and fabricated by PaR Systems (USA). The planned deconstruction activities require the handling of shielded waste disposal casks containing fuel as well as transporting extremely large structural elements -remotely controlled using video surveillance equipment. The lifting activities required the cranes to be tele-robotically controlled to prevent inadvertent collisions, expedite repetitive and high accuracy functions, protect the equipment and structures within the NSC as well as increase the overall effectiveness of the MCS. In addition, due to the elevated radiation levels, remote deconstruction activities will need to be performed. The MCS has design provisions included for a tele-robotically controlled manipulator and a suite of tooling to be used for multiple activities including concrete coring, cutting, debris collection and other heavy demolition activities. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

The transcription factor MEF2A plays a key role in the differentiation/maturation of rat neural stem cells into neurons

Highlights: • Undifferentiated and differentiated neural stem cells (NSCs) express MEF2A in vitro. • NSC-derived neurons express more MEF2A than NSC-derived glia. • Ablating MEF2A reduces NSC differentiation into neurons. Neural stem cells (NSCs) are self-renewing multipotent stem cells that can be proliferated in vitro and differentiated into neuronal and/or glial lineages, making them an ideal model to study the processes involved in neuronal differentiation. Here we have used NSCs to investigate the role of the transcription factor MEF2A in neuronal differentiation and development in vitro. We show that although MEF2A is present in undifferentiated NSCs, following differentiation it is expressed at significantly higher levels in a subset of neuronal compared to non-neuronal cells. Furthermore, shRNA-mediated knockdown of MEF2A reduces the number of NSC-derived neurons compared to non-neuronal cells after differentiation. Together, these data indicate that MEF2A participates in neuronal differentiation/maturation from NSCs.

60 APPLIED LIFE SCIENCES↗

Brush-Like Polymers and Entanglements: From Linear Chains to Filaments

Dynamics of melts and solutions of high molecular weight polymers and biopolymers is controlled by topological constraints (entanglements) imposing a sliding chain motion along an effective confining tube. For linear chains, the tube size is determined by universal packing number P e , the number of polymer strands within a confining tube that is required for chains to entangle. In this work, we show that in melts of brush-like (graft) polymers, consisting of linear chain backbones with grafted side chains, P e is not a universal number and depends on the molecular architecture. Specifically, we use coarse-grained molecular dynamics simulations to demonstrate that the packing number is a nonmonotonic function of the ratio R nsc /R ng of the size of the side chains R nsc to that of the backbone spacer between neighboring grafting points R ng . This parameter characterizes the degree of mutual interpenetration between side chains of the same macromolecule. We demonstrate that P e of brush-like polymers first decreases with increasing side chain grafting density in the dilute side chain regime (R nsc < R ng ), then begins to increase in the regime of overlapping side chains (R nsc > R ng ), approaching the value for linear chains in the limit of densely grafted side chains. This dependence of the packing number reflects a crossover from chain-like entanglements in systems with loosely grafted side chains (comb-like polymers) to entanglements between flexible filaments (bottlebrush-like polymers). Our simulation results are in agreement with the experimental data for the dependence of a plateau modulus on the molecular architecture of graft poly(n-butyl acrylates) and poly(norbornene)-graft-poly(lactide) melts.

36 MATERIALS SCIENCE↗

Effects of intermediate mass black holes on nuclear star clusters

Nuclear star clusters (NSCs) are dense stellar clusters observed in galactic nuclei, typically hosting a central massive black hole. Here we study the possible formation and evolution of NSCs through the inspiral of multiple star clusters hosting intermediate mass black holes (IMBHs). Using an N-body code, we examine the dynamics of the IMBHs and their effects on the NSC. We find that IMBHs inspiral to the core of the newly formed NSC and segregate there. Although the IMBHs scatter each other and the stars, none of them is ejected from the NSC. The IMBHs are excited to high eccentricities and their radial density profile develops a steep power-law cusp. The stars also develop a power-law cusp (instead of the central core that forms in their absence), but with a shallower slope. The relaxation rate of the NSC is accelerated due to the presence of IMBHs, which act as massive perturbers. This in turn fills the loss cone and boosts the tidal disruption rate of stars both by the MBH and the IMBHs to a value excluded by rate estimates based on current observations. Rate estimates of tidal disruptions can therefore provide a cumulative constraint on the existence of IMBHs in NSCs.

79 ASTRONOMY AND ASTROPHYSICS↗

Starch depletion in the xylem and phloem ray parenchyma of grapevine stems under drought

Abstract While nonstructural carbohydrate (NSC) storage can support long-lived woody plants during abiotic stress, the timing and extent of their use are less understood, as are the thresholds for cell mortality as NSCs and water supplies are consumed. Here, we combine physiological and imaging tools to study the response of Vitis riparia to a 6-week experimental drought. We focused on the spatial and temporal dynamics of starch consumption and cell viability in the xylem and phloem of the stem. Starch dynamics were further corroborated with enzymatic starch digestion and X-ray microcomputed tomography imaging. Starch depletion in the stems of droughted plants was detected after 2 weeks and continued over time. We observed distinct differences in starch content and cell viability in the xylem and phloem. By the end of the drought, nearly all the starch was consumed in the phloem ray parenchyma (98 % decrease), and there were almost no metabolically active cells in the phloem. In contrast, less starch was consumed in the xylem ray parenchyma (30 % decrease), and metabolically active cells remained in the ray and vessel-associated parenchyma in the xylem. Our data suggest that the higher proportion of living cells in the phloem and cambium, combined with smaller potential NSC storage area, rapidly depleted starch, which led to cell death. In contrast, the larger cross-sectional area of the xylem ray parenchyma with higher NSC storage and lower metabolically active cell populations depleted starch at a slower pace. Why NSC source-sink relationships between xylem and phloem do not allow for a more uniform depletion of starch in ray parenchyma over time is unclear. Our data help to pinpoint the proximate and ultimate causes of plant death during prolonged drought exposure and highlight the need to consider the influence of within-organ starch dynamics and cell mortality on abiotic stress response.

59 BASIC BIOLOGICAL SCIENCES↗

Declining carbohydrate content of Sitka-spruce treesdying from seawater exposure

Abstract Increasing sea levels associated with climate change threaten the survival of coastal forests, yet the mechanisms by which seawater exposure causes tree death remain poorly understood. Despite the potentially crucial role of nonstructural carbohydrate (NSC) reserves in tree survival, their dynamics in the process of death under seawater exposure are unknown. Here we monitored progressive tree mortality and associated NSC storage in Sitka-spruce (Picea sitchensis) trees dying under ecosystem-scale increases in seawater exposure in western Washington, USA. All trees exposed to seawater, because of monthly tidal intrusion, experienced declining crown foliage during the sampling period, and individuals with a lower percentage of live foliated crown (PLFC) died faster. Tree PLFC was strongly correlated with subsurface salinity and needle ion contents. Total NSC concentrations in trees declined remarkably with crown decline, and reached extremely low levels at tree death (2.4% and 1.6% in leaves and branches, respectively, and 0.4% in stems and roots). Starch in all tissues was almost completely consumed, while sugars remained at a homeostatic level in foliage. The decreasing NSC with closer proximity to death and near zero starch at death are evidences that carbon starvation occurred during Sitka-spruce mortality during seawater exposure. Our results highlight the importance of carbon storage as an indicator of tree mortality risks under seawater exposure.

59 BASIC BIOLOGICAL SCIENCES↗

An Integrated Model of Environmental Effects on Growth, Carbohydrate Balance, and Mortality of Pinus ponderosa Forests in the Southern Rocky Mountains

Climate-induced tree mortality is an increasing concern for forest managers around the world. We used a coupled hydrologic and ecosystem carbon cycling model to assess temperature and precipitation impacts on productivity and survival of ponderosa pine (Pinus ponderosa). Model predictions were evaluated using observations of productivity and survival for three ponderosa pine stands located across an 800 m elevation gradient in the southern Rocky Mountains, USA, during a 10-year period that ended in a severe drought and extensive tree mortality at the lowest elevation site. We demonstrate the utility of a relatively simple representation of declines in non-structural carbohydrate (NSC) as an approach for estimating patterns of ponderosa pine vulnerability to drought and the likelihood of survival along an elevation gradient. We assess the sensitivity of simulated net primary production, NSC storage dynamics, and mortality to site climate and soil characteristics as well as uncertainty in the allocation of carbon to the NSC pool. For a fairly wide set of assumptions, the model estimates captured elevational gradients and temporal patterns in growth and biomass. Model results that best predict mortality risk also yield productivity, leaf area, and biomass estimates that are qualitatively consistent with observations across the sites. Using this constrained set of parameters, we found that productivity and likelihood of survival were equally dependent on elevation-driven variation in temperature and precipitation. Our results demonstrate the potential for a coupled hydrology-ecosystem carbon cycling model that includes a simple model of NSC dynamics to predict drought-related mortality. Given that increases in temperature and in the frequency and severity of drought are predicted for a broad range of ponderosa pine and other western North America conifer forest habitats, the model potentially has broad utility for assessing ecosystem vulnerabilities.

54 ENVIRONMENTAL SCIENCES↗

Xeric Tree Populations Exhibit Delayed Summer Depletion of Root Starch Relative to Mesic Counterparts

Research linking soil moisture availability to nonstructural carbohydrate (NSC) storage suggests greater NSC reserves promote survival under acute water stress, but little is known about how NSC allocation responds to long-term differences in water availabilty. We hypothesized populations experiencing chronic or frequent water stress shift carbon allocation to build greater NSC reserves for increased survival probability during drought relative to populations rarely experiencing water stress. Over a year, we measured soluble sugar and starch concentrations from branches, stems, and coarse roots of mature Pinus palustris trees at two sites differing in long-term soil moisture availability. Xeric and mesic populations exhibited a cycle of summer depletion-winter accumulation in root starch. Xeric populations reached a maximum root starch concentration approximately 1–2 months later than mesic populations, indicating delayed summer depletion. Xeric and mesic populations reached the same minimum root starch at similar times, suggesting extended winter accumulation for xeric populations. These results suggest seasonal mobilization from root starch is compressed into a shorter interval for xeric populations instead of consistently greater reserves as hypothesized. Seasonal trends differed little between xeric and mesic populations for starch and sugars, suggesting the importance of roots in seasonal carbon dynamics and the primacy of starch for storage. If roots are the primary organ for longterm storage, then our results suggest that whole-plant mobilization and allocation respond to chronic differences in water availability.

54 ENVIRONMENTAL SCIENCES↗

Simulations of transition and turbulence on the Navier-Stokes computer

The Navier-Stokes Computer (NSC) consists of multiple local memory parallel processors interconnected in a hypercube network. Efficient implementation of algorithms on the NSC thus requires the effective utilization of both the coarse and fine grain paralelism inherent in the architectural design. The basic approach to implementing an algorithm on the NSC is presented herein. The particular finite-difference algorithm considered was developed for performing transition and turbulence simulations by direct solution of the time-dependent incompressible Navier-Stokes equations. The suitability of this algorithm for performing simulations of the isotropic turbulence problem is verified from computations performed on a Cray 2. Projected timing results for the algorithm on the NSC itself are presented for both the isotropic turbulence and laminar turbulent transition problems.

Krist, S. E.↗

On multigrid methods for the Navier-Stokes Computer

The overall architecture of the multipurpose parallel-processing Navier-Stokes Computer (NSC) being developed by Princeton and NASA Langley (Nosenchuck et al., 1986) is described and illustrated with extensive diagrams, and the NSC implementation of an elementary multigrid algorithm for simulating isotropic turbulence (based on solution of the incompressible time-dependent Navier-Stokes equations with constant viscosity) is characterized in detail. The present NSC design concept calls for 64 nodes, each with the performance of a class VI supercomputer, linked together by a fiber-optic hypercube network and joined to a front-end computer by a global bus. In this configuration, the NSC would have a storage capacity of over 32 Gword and a peak speed of over 40 Gflops. The multigrid Navier-Stokes code discussed would give sustained operation rates of about 25 Gflops.

Nosenchuck, D. M.↗

Growing the NASA Safety and Mission Assurance (SMA) Workforce of Tomorrow

The NASA Safety Center (NSC) was established in2006 in response to Columbia Accident Investigation Board (CAIB) recommendations to strengthen NASA’s safety program. The NSC supports all NASA centers and facilities. The NSC fosters world-class Safety and Mission Assurance (SMA) support for NASA programs and projects through professional development activities and the advancement of the following SMA technical disciplines: - Aviation Safety - Operational Safety - Quality Engineering - Reliability and Maintainability - SMA Technical Leadership - Software Assurance - System Safety The NSC’s Technical Excellence Office (TEO) is charged with encouraging technical excellence in NASA’s SMA community primarily through professional development products and services. TEO’s first initiative was the SMA Technical Excellence Program (STEP). STEP is a career-oriented, professional development roadmap for safety professionals, which is designed for the employee to learn specific knowledge and skills to improve performance in their current role.

Safety and Mission Assurance↗

Unique Chernobyl Cranes for Deconstruction Activities in the New Safe Confinement - 13542

The devastation left behind from the Chernobyl nuclear power plant (ChNPP) Unit 4 accident which occurred on April 26, 1986 presented unparalleled technical challenges to the world engineering and scientific community. One of the largest tasks that are in progress is the design and construction of the New Safe Confinement (NSC). The NSC is an engineered enclosure for the entire object shelter (OS) that includes a suite of process equipment. The process equipment will be used for the dismantling of the destroyed Chernobyl Nuclear Power Plant (ChNPP) Unit. One of the major mechanical handling systems to be installed in the NSC is the Main Cranes System (MCS). The planned decontamination and decommissioning or dismantling (D and D) activities will require the handling of heavily shielded waste disposal casks containing nuclear fuel as well as lifting and transporting extremely large structural elements. These activities, to be performed within the NSC, will require large and sophisticated cranes. The article will focus on the unique design features of the MCS for the D and D activities. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Legacy mercury: A watershed scale cleanup challenge - 15559

Over the next three decades, the US Department of Energy (DOE) Oak Ridge Office of Environmental Management (OREM) will focus on reducing the flux of mercury contamination that exits at the Y-12 National Security Complex (Y-12 NSC) [1, 2]. OREM, Tennessee Department of Environment and Conservation (TDEC), and US Environmental Protection Agency (EPA) have identified mercury contamination within and released from the Y-12 NSC as the highest priority cleanup risk on the Oak Ridge Reservation (ORR). Furthermore, mercury contamination is a worldwide issue with more than 3,000 mercury-contaminated sites currently identified [3], and the United Nations Environment Programme has recently highlighted the risk of this contamination to human health [4]. Unlike other contaminants-metals, radionuclides, and organic solvents-that impact the DOE Environmental Management (DOE-EM) cleanup program at the ORR and other DOE sites, mercury has several unique characteristics that make environmental remediation of the Y-12 NSC one of the most complex efforts ever encountered. These distinctive physicochemical properties for mercury include the following: it is a dense non-aqueous liquid at ambient-temperature-pressure; it is the only metal that bio-magnifies; and it is the only contaminant transported as both a cation and/or a dissolved or gaseous elemental metal (similar to an organic solvent) under environmental conditions. Most importantly, mercury also undergoes biogeochemical transformation processes, which include aqueous and surface complexation, redox reactions, and atypical methylation reactions, producing the potent neurotoxin methylmercury [5, 6]. Each of the aforementioned distinctive characteristics for mercury is observed within this heterogeneous and dynamic watershed-scale system-which includes the Y-12 NSC boundary and 23 km of contaminated creek and flood plain downstream. Because of these complexities, implementing cost effective and sustainable solutions that reduce mercury flux from various primary and secondary contamination sources will require the linking of basic science understanding and applied research advancements into OREM's cleanup process. In 2009, the DOE-EM Office of Site Restoration's Soil and Groundwater Remediation Program and Oak Ridge National Laboratory (ORNL) initiated an applied field research initiative with the goal of developing a systems-based approach to control mercury flux in soil and water to protect surface water, groundwater, and ecological receptors. The Remediation of Mercury and Industrial Contaminants Applied Field Research Initiative (ROMIC-AFRI) represents the vehicle that enables the linking of science to remedial applications. Here we discuss the progress made to date in addressing key applied research and technology development needs to address this watershed scale conundrum. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

The buffering capacity of stems: genetic architecture of nonstructural carbohydrates in cultivated Asian rice, Oryza sativa

Harnessing stem carbohydrate dynamics in grasses offers an opportunity to help meet future demands for plant-based food, fiber and fuel production, but requires a greater understanding of the genetic controls that govern the synthesis, interconversion and transport of such energy reserves. We map out a blueprint of the genetic architecture of rice ( Oryza sativa ) stem nonstructural carbohydrates (NSC) at two critical developmental time-points using a subpopulation-specific genome-wide association approach on two diverse germplasm panels followed by quantitative trait loci (QTL) mapping in a biparental population. Overall, 26 QTL are identified; three are detected in multiple panels and are associated with starch-at-maturity, sucrose-at-maturity and NSC-at-heading. They tag OsHXK6 (rice hexokinase), ISA2 (rice isoamylase) and a tandem array of sugar transporters. Furthermore, this study provides the foundation for more in-depth molecular investigation to validate candidate genes underlying rice stem NSC and informs future comparative studies in other agronomically vital grass species.

09 BIOMASS FUELS↗

Performance Test and Validation Plan for the Neutron Slab Counter (Rev.1)

This Performance Testing and Validation Plan (PTVP) presents the technical basis for the use of the neutron slab counter (NSC) for quantitative nondestructive assay (NDA) measurements of compressor volutes from the K-25/K-27 Buildings. This PTVP prescribes a set of measurements required to calibrate and demonstrate sufficiency of the NSC for its intended purpose of quantitative NDA measurements of compressor volutes. The measurements taken according to this plan will be documented in a Performance Test and Validation Report (PTVR). Analysis of the collected data will be performed and documented in a Performance Test and Validation Evaluation. If the performance objectives are met, a commissioning report will be prepared establishing the uses and limitations of the NSC for its intended purpose.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Copine1 regulates neural stem cell functions during brain development

Highlights: • Copine1 is highly expressed in neural lineage cells at early developmental stages. • Copine1 regulates the proliferation of embryonic neural stem cells (NSCs). • Copine1 regulates the differentiation of NSCs into neuronal and glial lineages. • mTOR signaling pathway is involved in Copine1-meidated neural development. Copine 1 (CPNE1) is a well-known phospholipid binding protein in plasma membrane of various cell types. In brain cells, CPNE1 is closely associated with AKT signaling pathway, which is important for neural stem cell (NSC) functions during brain development. Here, we investigated the role of CPNE1 in the regulation of brain NSC functions during brain development and determined its underlying mechanism. In this study, abundant expression of CPNE1 was observed in neural lineage cells including NSCs and immature neurons in human. With mouse brain tissues in various developmental stages, we found that CPNE1 expression was higher at early embryonic stages compared to postnatal and adult stages. To model developing brain in vitro, we used primary NSCs derived from mouse embryonic hippocampus. Our in vitro study shows decreased proliferation and multi-lineage differentiation potential in CPNE1 deficient NSCs. Finally, we found that the deficiency of CPNE1 downregulated mTOR signaling in embryonic NSCs. These data demonstrate that CPNE1 plays a key role in the regulation of NSC functions through the activation of AKT-mTOR signaling pathway during brain development.

60 APPLIED LIFE SCIENCES↗

Exosomes derived from human umbilical vein endothelial cells promote neural stem cell expansion while maintain their stemness in culture

The neural stem cell (NSC) niche in subventricular zone (SVZ) of adult mammalian brain contains dense vascular plexus, where endothelial cells (ECs) regulate NSCs by releasing plenty of angiocrine factors. However, the role of ECs-derived exosomes, a novel type of mediators of intercellular communications, in the regulation of NSCs remains unclear. In the current study, primary NSCs isolated from embryonic mouse brains form more neurospheres when cultured in the presence of human umbilical vein endothelial cells (HUVECs). The supportive role of ECs in the coculture was significantly attenuated when GW4869, a blocker of exosome formation, was included, suggesting that HUVECs-derived exosomes played a significant role in supporting NSCs. In order to investigate the role of ECs-derived exosomes on NSCs, we collected exosomes from HUVECs. We found that HUVECs-derived exosomes could significantly promote the formation of neurospheres by primary murine NSCs. EdU incorporation and TUNEL assays indicated that the proliferation of NSCs increased while apoptosis decreased when cultured in the presence of HUVECs-derived exosomes. NSCs incubated with the HUVECs-derived exosomes maintained their potential of multi-lineage differentiation potentials. The expression of stemness-related genes was up-regulated. These data suggested that ECs-derived exosomes could play an importantly role in NSC niche, and they might be used as a reagent for ex vivo NSC amplification for medical application.

60 APPLIED LIFE SCIENCES↗