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At least 55 records · Page 3

Knowledge Representation Standards and Interchange Formats for Causal Graphs

In many domains, automated reasoning tools must represent graphs of causally linked events. These include fault-tree analysis, probabilistic risk assessment (PRA), planning, procedures, medical reasoning about disease progression, and functional architectures. Each of these fields has its own requirements for the representation of causation, events, actors and conditions. The representations include ontologies of function and cause, data dictionaries for causal dependency, failure and hazard, and interchange formats between some existing tools. In none of the domains has a generally accepted interchange format emerged. The paper makes progress towards interoperability across the wide range of causal analysis methodologies. We survey existing practice and emerging interchange formats in each of these fields. Setting forth a set of terms and concepts that are broadly shared across the domains, we examine the several ways in which current practice represents them. Some phenomena are difficult to represent or to analyze in several domains. These include mode transitions, reachability analysis, positive and negative feedback loops, conditions correlated but not causally linked and bimodal probability distributions. We work through examples and contrast the differing methods for addressing them. We detail recent work in knowledge interchange formats for causal trees in aerospace analysis applications in early design, safety and reliability. Several examples are discussed, with a particular focus on reachability analysis and mode transitions. We generalize the aerospace analysis work across the several other domains. We also recommend features and capabilities for the next generation of causal knowledge representation standards.

Throop, David R.↗

Detecting dynamic causal inference in nonlinear two-phase fracture flow

Identifying dynamic causal inference involved in flow and transport processes in complex fractured-porous media is generally a challenging task, because nonlinear and chaotic variables may be positively coupled or correlated for some periods of time, but can then become spontaneously decoupled or non-correlated. In his 2002 paper (Faybishenko, 2002), the author performed a nonlinear dynamical and chaotic analysis of time-series data obtained from the fracture flow experiment conducted by Persoff and Pruess (1995), and, based on the visual examination of time series data, hypothesized that the observed pressure oscillations at both inlet and outlet edges of the fracture result from a superposition of both forward and return waves of pressure propagation through the fracture. In the current paper, the author explores an application of a combination of methods for detecting nonlinear chaotic dynamics behavior along with the multivariate Granger Causality (G-causality) time series test. Based on the G-causality test, the author infers that his hypothesis is correct, and presents a causation loop diagram of the spatial-temporal distribution of gas, liquid, and capillary pressures measured at the inlet and outlet of the fracture. The causal modeling approach can be used for the analysis of other hydrological processes, for example, infiltration and pumping tests in heterogeneous subsurface media, and climatic processes, for example, to find correlations between various meteorological parameters, such as temperature, solar radiation, barometric pressure, etc.

54 ENVIRONMENTAL SCIENCES↗

Causality-respecting adaptive refinement for PINNs: enabling precise interface evolution in phase field modeling

Physics-informed neural networks (PINNs) have emerged as a powerful tool for solving physical systems described by partial differential equations (PDEs). However, their accuracy in dynamical systems, particularly those involving sharp moving boundaries with complex initial morphologies, remains a challenge. Here, this study introduces an approach combining residual-based adaptive refinement (RBAR) with causality-informed training to enhance the performance of PINNs in solving spatio-temporal PDEs. Our method employs a three-step iterative process: initial causality-based training, RBAR-guided domain refinement, and subsequent causality training on the refined mesh. Applied to the Allen-Cahn equation, a widely-used model in phase field simulations, our approach demonstrates significant improvements in solution accuracy and computational efficiency over traditional PINNs. Notably, we observe an ‘overshoot and relocate’ phenomenon in dynamic cases with complex morphologies, showcasing the method’s adaptive error correction capabilities. This synergistic interaction between RBAR and causality training enables accurate capture of interface evolution, even in challenging scenarios where traditional PINNs fail. Our framework not only resolves the limitations of uniform refinement strategies but also provides a generalizable methodology for solving a broad range of spatio-temporal PDEs. The enhanced performance of the RBAR–causality combined framework demonstrates its strong potential for advancing PINN-based modeling of physical systems characterized by complex, evolving interfaces.

Allen-Cahn equations↗

Monitoring the propagation of mechanical discontinuity using data-driven causal discovery and supervised learning

Mechanical wave transmission through a material is influenced by the mechanical discontinuity in the material. The propagation of embedded discontinuities can be monitored by analyzing the wave-transmission measurements recorded by a multipoint sensor system placed on the surface of the material. The proposed workflow monitors the propagation of mechanical discontinuity through three stages, namely initial, intermediate, and final stages, by using supervised learning followed by data-driven causal discovery. To the end, the workflow processes the multipoint waveform measurements resulting from a single impulse source, while considering the effects of wave attenuation, dispersion and multiple wave-propagation modes due to the discontinuity and material boundaries. Among various feature reduction techniques ranging from decomposition methods to manifold approximation methods, the features derived based on statistical parameterizations of the measured waveforms lead to reliable monitoring that is robust to changes in precision, resolution, and signal-to-noise ratio of the multipoint sensor measurements. The numbers of zero-crossing, negative-turning, and positive turning in the waveforms are the strongest causal signatures of the propagation of mechanical discontinuity. Higher order moments of the waveforms, such as variance, skewness and kurtosis, are also strong causal signatures of the propagation. Finally, the newly discovered causal signatures confirm that the statistical correlations and conventional feature rankings are not always statistically significant indicators of causality.

42 ENGINEERING↗

Causal discovery from data assisted by large language models

Knowledge-driven discovery of novel materials necessitates the development of causal models for property emergence. While in the classical physical paradigm, the causal relationships are deduced based on physical principles or via experiment, the rapid accumulation of observational data necessitates learning causal relationships between dissimilar aspects of material structure and functionalities based on observations. For this, it is essential to integrate experimental data with prior domain knowledge. Here, we demonstrate this approach by combining high-resolution scanning transmission electron microscopy data with insights derived from large language models (LLMs). By applying ChatGPT to domain-specific literature, such as arXiv papers on ferroelectrics, and combining the obtained information with data-driven causal discovery, we construct adjacency matrices for directed acyclic graphs that map the causal relationships between structural, chemical, and polarization degrees of freedom in Sm-doped BiFeO 3 . This approach enables us to hypothesize how synthesis conditions influence material properties and guides experimental validation. Furthermore, the ultimate objective of this work is to develop a unified framework that integrates LLM-driven literature analysis with data-driven discovery, facilitating the precise engineering of ferroelectric materials by establishing clear connections between synthesis conditions and their resulting material properties.

Causal inference↗

Mapping causal pathways with structural modes fingerprint for perovskite oxides

Abstract Causality is innate to the determination of the fundamental mechanism controlling any physical phenomena. However, combining causality within the standard practices of computational modelling to understand structure-functionality connections is extremely rare. This work proposes a fingerprint based on key structural modes for ABO 3 -type perovskite oxides and its derivatives, combined with causal models, for predicting Kohn–Sham energies. Our study of causal models captures the inherent coupling between structural modes such as rotation, tilt and antiferroelectric displacements, responsible for phase transition, polarization, magnetization and metal–insulator transition, exhibited by these materials. Although developed for modelling specific functionality, this method is universally applicable to derive other functionalities and even different material classes while tracking hidden causal mechanisms via structural distortions.

42 ENGINEERING↗

A Causal Approach to Model Validation and Calibration

This poster presents a novel method for validation and verification that focuses on identifying causal relationships between data elements, moving beyond traditional statistical and machine learning approaches. These methods employ causal discovery techniques to reveal the underlying mechanisms of data generation. The research utilizes structural causal models and directed acyclic graphs to depict causal relationships. This approach assists in achieving alignment between simulation models and reality.

97 MATHEMATICS AND COMPUTING↗

Quantitative-qualitative assessments of environmental causal networks to support the DPSIR framework in the decision-making process

Highlights: • DSPIR framework is extended for supporting the decision-making process. • Environmental causal networks are used instead of unidirectional causalities. • Quantitative and qualitative data are combined to improve environmental assessments. • Decision-makers can choose management actions to reach favorable future scenarios. - Abstract: The DPSIR framework helps to identify and situate stressors, drivers and pressure variables within a dynamic environmental process composed of cause-effect relations. However, an important aspect related to its structural deficiency implies the use of unidirectional causalities between variables. In this work, we extend the capacities of the DPSIR framework by addressing three important points. Firstly, causal networks are built instead of unidirectional causalities, the former based on paths represented by sequences of cause-effect relations between involved variables. These paths are derived from the population growth as a driving force variable, along with CO{sub 2} emissions, waste, water and loss of vegetation cover as pressure variables. Trends of these paths are combined to determine and quantitatively assess a global environmental state trend whose impacts on the environment require corrective management actions as a response. Secondly, quantitative assessments of environmental trends are transformed into fuzzy-qualitative data to facilitate their interpretation. Thirdly, a method based on weighted environmental management actions is presented to decision-makers who aspire to change current path trends in order to approach desirable scenarios similar to those put forth by the OECD outlook towards 2030. The results obtained applying this framework to the State of Morelos, México, show that it can be a useful support tool in the selection and monitoring of management actions capable of reaching favorable environmental trends.

54 ENVIRONMENTAL SCIENCES↗

Causal structure of interacting Weyl fermions in condensed matter systems

Abstract The spacetime light cone is central to the definition of causality in the theory of relativity. Recently, links between relativistic and condensed matter physics have been uncovered, where relativistic particles can emerge as quasiparticles in the energy-momentum space of matter. Here, we unveil an energy-momentum analogue of the spacetime light cone by mapping time to energy, space to momentum, and the light cone to the Weyl cone. We show that two Weyl quasiparticles can only interact to open a global energy gap if they lie in each other’s energy-momentum dispersion cones–analogous to two events that can only have a causal connection if they lie in each other’s light cones. Moreover, we demonstrate that the causality of surface chiral modes in quantum matter is entangled with the causality of bulk Weyl fermions. Furthermore, we identify a unique quantum horizon region and an associated ‘thick horizon’ in the emergent causal structure.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Data-driven causal model discovery and personalized prediction in Alzheimer's disease

Abstract With the explosive growth of biomarker data in Alzheimer’s disease (AD) clinical trials, numerous mathematical models have been developed to characterize disease-relevant biomarker trajectories over time. While some of these models are purely empiric, others are causal, built upon various hypotheses of AD pathophysiology, a complex and incompletely understood area of research. One of the most challenging problems in computational causal modeling is using a purely data-driven approach to derive the model’s parameters and the mathematical model itself, without any prior hypothesis bias. In this paper, we develop an innovative data-driven modeling approach to build and parameterize a causal model to characterize the trajectories of AD biomarkers. This approach integrates causal model learning, population parameterization, parameter sensitivity analysis, and personalized prediction. By applying this integrated approach to a large multicenter database of AD biomarkers, the Alzheimer’s Disease Neuroimaging Initiative, several causal models for different AD stages are revealed. In addition, personalized models for each subject are calibrated and provide accurate predictions of future cognitive status.

Zheng, Haoyang (ORCID:0000000168358242)↗

Causal interaction in high frequency turbulence at the biosphere–atmosphere interface: Structural behavior

High-frequency (e.g., 10 Hz) eddy covariance measurements are typically used to estimate fluxes at the land–atmosphere interface at timescales of 15–60 min. These multivariate data contain information about the interdependency at high frequency between the interacting variables such as wind, humidity, temperature, and CO 2⁠ . We use data at 10 Hz from an eddy covariance instrument located at 25 m above agricultural land in the Midwestern US, which offers an opportunity to move beyond the traditional spectral analyses to explore causal dependency among variables. In this study, we quantify the structure of inter-dependencies of interacting variables at high frequency represented by a directed acyclic graph (DAG). We compare DAGs to investigate changes in structural differences in causal interactions. We then apply a distance-based classification and -means clustering approach to identify the evolution of the causal structure represented by a DAG. Our method selects an unbiased number of clusters of similar structures and characterizes the similarities and differences between them. We explore a range of dynamic behavior using data from a clear sky day and during a solar eclipse in 2017. Our results show well-defined clusters of similar causal dependencies as the system evolves. Furthermore, our approach provides a methodological framework to understand how causal dependence in turbulence manifests in high-frequency data when represented through a DAG.

54 ENVIRONMENTAL SCIENCES↗

Nonlinear causality of Israel-Stewart theory with diffusion

We present the first fully nonlinear causality constraints in D = 3 + 1 dimensions for Israel-Stewart theory in the presence of energy and number diffusion in the Eckart and Landau hydrodynamic frames, respectively. These constraints are algebraic inequalities that make no assumption on the underlying geometry of the spacetime or the equation of state. In order to highlight the distinct physical and structural behavior of the two hydrodynamic frames, we discuss the special ultrarelativistic ideal gas equation of state considered in earlier literature in D = 1 + 1 dimensions, and show that our general D = 3 + 1 constraints reduce to their results upon an appropriate choice of angles. For this equation of state in both D = 1 + 1 and D = 3 + 1 dimensions one can show that: (i) there exists a region allowed by nonlinear causality in which the baryon current transitions into a spacelike vector in the Landau frame, and (ii) an analogous argument shows that the solutions of the Eckart frame equations of motion never violate the dominant energy condition, assuming nonlinear causality holds. Furthermore, we then compare our results with those from linearized Israel-Stewart theory and show that the linear causality bounds fail to capture the new physical constraints on energy and number diffusion that are successfully obtained through our nonlinear causality approach.

Quark-gluon plasma↗

Causal and stable first-order chiral hydrodynamics

We derive the set of inequalities that is necessary and sufficient for nonlinear causality and linear stability of first-order relativistic hydrodynamics with either a U ( 1 ) V conserved current or a U ( 1 ) A current with a chiral anomaly or both. Our results apply to generic hydrodynamic frames in which no relations among the transport parameters are imposed. Furthermore, our analysis yields, to the best of our knowledge, the first theory of viscous chiral hydrodynamics proven to be causal and stable. We find that causality demands the absence of vorticity-induced heat flux, forcing a departure from the thermodynamic frame in the chiral case. The inequalities for causality and stability define a hypervolume in the space of transport parameters, wherein each point corresponds to a consistent formulation. Notably, causality is determined by just three combinations of transport parameters. We present our results in a form amenable to numerical hydrodynamic simulations. Published by the American Physical Society 2024

Astronomy & Astrophysics↗

A Causal Inference Model Based on Random Forests to Identify the Effect of Soil Moisture on Precipitation

Soil moisture influences precipitation mainly through its impact on land–atmosphere interactions. Understanding and correctly modeling soil moisture–precipitation (SM–P) coupling is crucial for improving weather forecasting and subseasonal to seasonal climate predictions, especially when predicting the persistence and magnitude of drought. However, the sign and spatial structure of SM–P feedback are still being debated in the climate research community, mainly due to the difficulty in establishing causal relationships and the high degree of nonlinearity in land–atmosphere processes. To this end, we developed a causal inference model based on the Granger causality analysis and a nonlinear machine learning model. This model includes three steps: nonlinear anomaly decomposition, nonlinear Granger causality analysis, and evaluation of the quality of SM–P feedback, which eliminates the nonlinear response of interannual and seasonal variability and the memory effects of climatic factors and isolates the causal relationship of local SM–P feedback. We applied this model by using National Climate Assessment–Land Data Assimilation System (NCA-LDAS) datasets over the United States. Here, the results highlight the importance of nonlinear atmosphere responses in land–atmosphere interactions. In addition, the strong feedback over the southwestern United States and the Great Plains both highlight the impacts of topographic factors rather than only the sensitivity of evapotranspiration to soil moisture. Furthermore, the SM–P index defined by our framework is used to benchmark Earth system models (ESMs), which provides a new metric for efficiently identifying potential model biases in modeling local land–atmosphere interactions and may help the development of ESMs in improving simulations of water cycle variability and extremes.

54 ENVIRONMENTAL SCIENCES↗

Causal relationship between mitochondrial-associated proteins and cerebral aneurysms: a Mendelian randomization study

Background Cerebral aneurysm is a high-risk cerebrovascular disease with a poor prognosis, potentially linked to multiple factors. This study aims to explore the association between mitochondrial-associated proteins and the risk of cerebral aneurysms using Mendelian randomization (MR) methods. Methods We used GWAS summary statistics from the IEU Open GWAS project for mitochondrial-associated proteins and from the Finnish database for cerebral aneurysms (uIA, aSAH). The association between mitochondrial-associated exposures and cerebral aneurysms was evaluated using MR-Egger, weighted mode, IVW, simple mode and weighted median methods. Reverse MR assessed reverse causal relationship, while sensitivity analyses examined heterogeneity and pleiotropy in the instrumental variables. Significant causal relationship with cerebral aneurysms were confirmed using FDR correction. Results Through MR analysis, we identified six mitochondrial proteins associated with an increased risk of aSAH: AIF1 (OR: 1.394, 95% CI: 1.109–1.752, p = 0.0044), CCDC90B (OR: 1.318, 95% CI: 1.132–1.535, p = 0.0004), TIM14 (OR: 1.272, 95% CI: 1.041–1.553, p = 0.0186), NAGS (OR: 1.219, 95% CI: 1.008–1.475, p = 0.041), tRNA PusA (OR: 1.311, 95% CI: 1.096–1.569, p = 0.003), and MRM3 (OR: 1.097, 95% CI: 1.016–1.185, p = 0.0175). Among these, CCDC90B, tRNA PusA, and AIF1 demonstrated a significant causal relationship with an increased risk of aSAH (FDR q < 0.1). Three mitochondrial proteins were associated with an increased risk of uIA: CCDC90B (OR: 1.309, 95% CI: 1.05–1.632, p = 0.0165), tRNA PusA (OR: 1.306, 95% CI: 1.007–1.694, p = 0.0438), and MRM3 (OR: 1.13, 95% CI: 1.012–1.263, p = 0.0303). In the reverse MR study, only one mitochondrial protein, TIM14 (OR: 1.087, 95% CI: 1.004–1.177, p = 0.04), showed a causal relationship with aSAH. Sensitivity analysis did not reveal heterogeneity or pleiotropy. The results suggest that CCDC90B, tRNA PusA, and MRM3 may be common risk factors for cerebral aneurysms (ruptured and unruptured), while AIF1 and NAGS are specifically associated with an increased risk of aSAH, unrelated to uIA. TIM14 may interact with aSAH. Conclusion Our findings confirm a causal relationship between mitochondrial-associated proteins and cerebral aneurysms, offering new insights for future research into the pathogenesis and treatment of this condition.

Wang, Shuai↗

Non-Causal Controller Approximation Methodology Augmented with Model Reference Control – Robust Design

This paper describes the development of a new control design methodology based on a non-causal controller structure and its approximation. The non-causal controller design is based on a loop shaping approach. Partial fraction decomposition is used, along with derivative approximations, to derive a proper transfer function design for a causal control structure. The premise for this non-causal control methodology is that the phase delay as a function of frequency ideally remains within approximately -90o, which tends to make the system robustly stable to uncertainties in the plant dynamics. To have a predictable control system response in lieu of the tolerance of this methodology to relatively large uncertainty in the plant dynamics, the approach is augmented with model reference control. The addition of model reference control can potentially further enhance the robustness of the design. A control system design example is presented in this paper, along with simulation results, to demonstrate the high degree of robustness of this non-causal methodology and its augmentation.

Control Systems↗

Attention for Causal Relationship Discovery from Biological Neural Dynamics

This paper explores the potential of the transformer models for learning Granger causality in networks with complex nonlinear dynamics at every node, as in neurobiological and biophysical networks. Our study primarily focuses on a proof-of-concept investigation based on simulated neural dynamics, for which the ground-truth causality is known through the underlying connectivity matrix. For transformer models trained to forecast neuronal population dynamics, we show that the cross-attention module effectively captures the causal relationship among neurons, with an accuracy equal to or superior to that of the most popular Granger causality discovery method. While we acknowledge that real-world neurobiology data will bring further challenges, including dynamic connectivity and unobserved variability, this research offers an encouraging preliminary glimpse into the utility of the transformer model for causal representation learning in neuroscience.

Lu, Ziyu↗

The Epstein–Glaser causal approach to the light-front QED{sub 4}. II: Vacuum polarization tensor

In this work we show how to construct the one-loop vacuum polarization for light-front QED{sub 4} in the framework of the perturbative causal theory. Usually, in the canonical approach, it is considered for the fermionic propagator the so-called instantaneous term, but it is known in the literature that this term is controversial because it can be omitted by computational reasons; for instance, by compensation or vanishing by dimensional regularization. In this work we propose a solution to this paradox. First, in the Epstein–Glaser causal theory, it is shown that the fermionic propagator does not have instantaneous term, and with this propagator we calculate the one-loop vacuum polarization, from this calculation it follows the same result as those obtained by the standard approach, but without reclaiming any extra assumptions. Moreover, since the perturbative causal theory is defined in the distributional framework, we can also show the reason behind our obtaining the same result whether we consider or not the instantaneous fermionic propagator term. - Highlights: • We develop the Epstein–Glaser causal approach for light-front field theory. • We evaluate in detail the vacuum polarization at one-loop for the light-front QED. • We discuss the subtle issues of the Instantaneous part of the fermionic propagator in the light-front. • We evaluate the vacuum polarization at one-loop for the light-front QED with the Instantaneous fermionic part.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗