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At least 55 records · Page 3

Error estimates of finite difference methods for the Dirac equation in the massless and nonrelativistic regime

We present four frequently used finite difference methods and establish the error bounds for the discretization of the Dirac equation in the massless and nonrelativistic regime, involving a small dimensionless parameter 0 < ε &NestedLessLess; 1 inversely proportional to the speed of light. In the massless and nonrelativistic regime, the solution exhibits rapid motion in space and is highly oscillatory in time. Specifically, the wavelength of the propagating waves in time is at O(ε), while in space, it is at O(1) with the wave speed at O(ε -1 ). We adopt one leap-frog, two semi-implicit, and one conservative Crank-Nicolson finite difference methods to numerically discretize the Dirac equation in one dimension and establish rigorously the error estimates which depend explicitly on the time step τ, mesh size h, and the small parameter ε. The error bounds indicate that, to obtain the “correct” numerical solution in the massless and nonrelativistic regime, i.e., 0 < ε &NestedLessLess; 1, all these finite difference methods share the same ε-scalability as time step τ = O(ε 3/2 ) and mesh size h = O(ε 1/2 ). A large number of numerical results are reported to verify the error estimates.

97 MATHEMATICS AND COMPUTING↗

Chromoelectric field correlator for quarkonium transport in the strongly coupled $ \mathcal{N}$ = 4 Yang-Mills plasma from AdS/CFT

Previous studies have shown that a gauge-invariant correlation function of two chromoelectric fields connected by a straight timelike adjoint Wilson line encodes crucial information about quark-gluon plasma (QGP) that determines the dynamics of small-sized quarkonium in the medium. Motivated by the successes of holographic calculations to describe strongly coupled QGP, we calculate the analog gauge-invariant correlation function in strongly coupled $\mathcal{N}$ = 4 supersymmetric Yang-Mills theory at finite temperature by using the AdS/CFT correspondence. Our results indicate that the transition processes between bound and unbound quarkonium states are suppressed in strongly coupled plasmas, and moreover, the leading contributions to these transition processes vanish in both the quantum Brownian motion and quantum optical limits of open quantum system approaches to quarkonia

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Unexpected Scaling of Peak Acceleration for a Yielding Mass-Spring System Subjected to a Triangular Base Acceleration Pulse

The use of bounding scenarios is a common practice that greatly simplifies the design and qualification of structures. However, this approach implicitly assumes that the quantities of interest increase monotonically with the input to the structure, which is not necessarily true for nonlinear structures. This paper surveys the literature for observations of nonmonotonic behavior of nonlinear systems and finds such observations in both the earthquake engineering and applied mechanics literature. Numerical simulations of a single degree-of-freedom mass-spring system with an elastic–plastic spring subjected to a triangular base acceleration pulse are then presented, and it is shown that the relative acceleration of this system scales nonmonotonically with the input magnitude in some cases. The equation of motion for this system is solved symbolically and an approximate expression for the relative acceleration is developed, which qualitatively agrees with the nonmonotonic behavior seen in the numerical results. The nonmonotonicity is investigated and found to be a result of dynamics excited by the discontinuous derivative of the base acceleration pulse, the magnitude of which scales nonmonotonically with the input magnitude due to the fact that the first yield of the spring occurs earlier as the input magnitude is increased. The relevance of this finding within the context of defining bounding scenarios is discussed, and it is recommended that modeling be used to perform a survey of the full range of possible inputs prior to defining bounding scenarios.

42 ENGINEERING↗

Spectral distortions to momentum and scalar exchanges by non-turbulent motion and patchy landscape variability

Modifications to the spectra of turbulent velocity and scalars and co-spectra of vertical fluxes of momentum and scalars due to patchy landscape heterogeneity and non-stationarity are explored for a Mediterranean ecosystem. About 9 months of high frequency measurements of the three velocity components, water vapor concentration, carbon dioxide concentration, and air temperature were analyzed for different seasons (spring/summer) and prevalent wind directions (southeast/northwest). The two wind directions sampled a contrast of clumped and patchy landscape comprised of olive trees (southeast) and wall bounded flow disturbed by the presence of few upwind trees (northwest). The measured spectra and co-spectra were also compared to theoretical scaling forms from stationary, planar homogeneous flow, in the absence of subsidence as derived from the Kansas experiment. To assess the role of low frequency non-turbulent motion on the spectral and co-spectral content, a 5-min Fourier cutoff was introduced and the analysis was limited to near-neutral conditions where the boundary layer depth is shallow compared to its unstable counterpart. It was shown that the velocity statistics were not appreciably impacted by the low-frequency motion causing non-stationarity. Moreover, the turbulent scalar fluxes were also shown not to be significantly impacted by such low frequency motion. The scalar variances were impacted, especially the water vapor variance and its concomitant spectral shape. When the non-turbulent motion was filtered, the scalar spectra at low wavenumbers followed expectations from the so-called attached eddy hypothesis (i.e. exhibited a $k^{-1}_x$ scaling with $k_x$ defining the longitudinal wavenumber) applicable for near-neutral conditions. For momentum co-spectra, the canonical shapes from the Kansas experiment appear to describe well the measurements here and in both dominant directions and seasons with some adjustment to the integral time scales based on wind direction. For the scalar co-spectra, deviations from the Kansas experiment were prevalent. The most noticeable and surprising deviations were their slow decay with increased sampling frequency at inertial subrange scales. This slow decay was shown not to contribute appreciably to the overall scalar fluxes. At those fine scales, predictions from local isotropy were expected to hold. The scalar co-spectral deviations from local isotropy were then discussed using a simplified co-spectral budget model where scalar–scalar co-spectra naturally emerged and the interplay between landscape heterogeneity and a scale-dependent pressure-scalar de-correlation time was postulated. It is also envisaged that the findings here offer a preliminary template for analyzing eddy-covariance data in situations that deviate from ideal conditions, especially regarding low-frequency modulations of scalar spectra and vertical scalar flux co-spectra.

Canopy turbulence↗

Don't cross the streams: caustics from fuzzy dark matter

Here we study how tidal streams from globular clusters may be used to constrain the mass of ultra-light dark matter particles, called `fuzzy' dark matter (FDM). A general feature of FDM models is the presence of ubiquitous density fluctuations in bound, virialized dark matter structures, on the scale of the de Broglie wavelength, arising from wave interference in the evolving dark matter distribution. These time-varying fluctuations can disturb the motions of stars, leading to potentially observable signatures in cold thin tidal streams in our own Galaxy. The study of this effect has been hindered by the difficulty in simulating the FDM wavefunction in Milky Way-sized systems. We present a simple method to evolve realistic wavefunctions in nearly static potentials, that should provide an accurate estimate of this granulation effect. We quantify the impact of FDM perturbations on tidal streams, and show that initially, while stream perturbations are small in amplitude, their power spectra exhibit a sharp cutoff corresponding to the de Broglie wavelength of the FDM potential fluctuations. Eventually, when stream perturbations become nonlinear, fold caustics generically arise that lead to density fluctuations with universal behavior. This erases the signature of the de Broglie wavelength in the stream density power spectrum, but we show that it will still be possible to determine the FDM mass in this regime, by considering the fluctuations in quantities like angular momenta or actions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Nonlinear causality of Israel-Stewart theory with diffusion

We present the first fully nonlinear causality constraints in D = 3 + 1 dimensions for Israel-Stewart theory in the presence of energy and number diffusion in the Eckart and Landau hydrodynamic frames, respectively. These constraints are algebraic inequalities that make no assumption on the underlying geometry of the spacetime or the equation of state. In order to highlight the distinct physical and structural behavior of the two hydrodynamic frames, we discuss the special ultrarelativistic ideal gas equation of state considered in earlier literature in D = 1 + 1 dimensions, and show that our general D = 3 + 1 constraints reduce to their results upon an appropriate choice of angles. For this equation of state in both D = 1 + 1 and D = 3 + 1 dimensions one can show that: (i) there exists a region allowed by nonlinear causality in which the baryon current transitions into a spacelike vector in the Landau frame, and (ii) an analogous argument shows that the solutions of the Eckart frame equations of motion never violate the dominant energy condition, assuming nonlinear causality holds. Furthermore, we then compare our results with those from linearized Israel-Stewart theory and show that the linear causality bounds fail to capture the new physical constraints on energy and number diffusion that are successfully obtained through our nonlinear causality approach.

Quark-gluon plasma↗

Quantum stresses in the hydrogen atom

Gravitational form factors are often interpreted as providing access to stresses inside hadrons, in particular through Fourier transforms of the form factors 𝐷 and $\bar{𝑐}$. Some researchers, however, have expressed skepticism of this interpretation. I revisit the question, and argue that it is indeed appropriate to interpret these quantities as stress distributions. I consider the hydrogen atom’s ground state as a familiar example, and use the pilot wave interpretation of quantum mechanics to give the distributions a clear meaning. A striking result is that $\bar{𝑐}$—rather than 𝐷—quantifies the force law binding the system, which can be understood through Cauchy’s first law of motion.

74 ATOMIC AND MOLECULAR PHYSICS↗

Canonical Transformation of Potential Model Hamiltonian Mechanics to Geometrical Form I

Using the methods of symplectic geometry, we establish the existence of a canonical transformation from potential model Hamiltonians of standard form in a Euclidean space to an equivalent geometrical form on a manifold, where the corresponding motions are along geodesic curves. The advantage of this representation is that it admits the computation of geodesic deviation as a test for local stability, shown in recent previous studies to be a very effective criterion for the stability of the orbits generated by the potential model Hamiltonian. We describe here an algorithm for finding the generating function for the canonical transformation and describe some of the properties of this mapping under local diffeomorphisms. We give a convergence proof for this algorithm for the one-dimensional case, and provide a precise geometric formulation of geodesic deviation which relates the stability of the motion in the geometric form to that of the Hamiltonian standard form. We apply our methods to a simple one-dimensional harmonic oscillator and conclude with a discussion of the relation of bounded domains in the two representations for which Morse theory would be applicable.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Geodesic motion around hairy black holes

In a recent paper Ovalle et al. (2021) it has been obtained new static black hole solutions with primary hairs by the Gravitational Decoupling. In this work we either study the geodesic motion of massive and massless particles around those solutions and restrict the values of the primary hairs by observational data. In particular, we obtain the effective potential, the innermost stable circular orbits, the marginally bounded orbit, and the periastron advance for time-like geodesics. In order to restrict the values taken by the primary hairs we explore their relationship with the rotation parameter of the Kerr black hole giving the same innermost stable circular orbit radius and give the numerical values for the supermassive black holes at Ark 564 and NGC 1365. The photon sphere and the impact parameter associated to null geodesics are also discussed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Mechanism of Rad26-assisted rescue of stalled RNA polymerase II in transcription-coupled repair

Transcription-coupled repair is essential for the removal of DNA lesions from the transcribed genome. The pathway is initiated by CSB protein binding to stalled RNA polymerase II. Mutations impairing CSB function cause severe genetic disease. Yet, the ATP-dependent mechanism by which CSB powers RNA polymerase to bypass certain lesions while triggering excision of others is incompletely understood. Here we build structural models of RNA polymerase II bound to the yeast CSB ortholog Rad26 in nucleotide-free and bound states. This enables simulations and graph-theoretical analyses to define partitioning of this complex into dynamic communities and delineate how its structural elements function together to remodel DNA. We identify an allosteric pathway coupling motions of the Rad26 ATPase modules to changes in RNA polymerase and DNA to unveil a structural mechanism for CSB-assisted progression past less bulky lesions. Our models allow functional interpretation of the effects of Cockayne syndrome disease mutations.

59 BASIC BIOLOGICAL SCIENCES↗

Structural basis for the mechanisms of human presequence protease conformational switch and substrate recognition

Presequence protease (PreP), a 117kDa mitochondrial M16C metalloprotease vital for mitochondrial proteostasis, degrades presequence peptides cleaved off from nuclear-encoded proteins and other aggregation-prone peptides, such as amyloid β (Aβ). PreP structures have only been determined in a closed conformation; thus, the mechanisms of substrate binding and selectivity remain elusive. Here, we leverage advanced vitrification techniques to overcome the preferential denaturation of one of two ~55 kDa homologous domains of PreP caused by air-water interface adsorption. Thereby, we elucidate cryoEM structures of three apo-PreP open states along with Aβ- and citrate synthase presequence-bound PreP at 3.3–4.6 Å resolution. Together with integrative biophysical and pharmacological approaches, these structures reveal the key stages of the PreP catalytic cycle and how the binding of substrates or PreP inhibitor drives a rigid body motion of the protein for substrate binding and catalysis. Together, our studies provide key mechanistic insights into M16C metalloproteases for future therapeutic innovations.

59 BASIC BIOLOGICAL SCIENCES↗

Motion Planning Algorithms for Safety and Quantum Computing Efficiency

Motion planning remains a fundamental problem in robotics. Sampling-based algorithms use randomization to allow efficient solutions to this complex problem. As mobile robots and autonomous vehicles become more prevalent in everyday life, motion planning must be applied to increasingly challenging scenarios. Safety has become a paramount concern in motion planning for ensuring robotic applications enrich human lives. To date, many motion planning techniques to increase safety in the face of uncertain and dynamic environments have been developed. This dissertation first addresses distributional safety of Rapidly-Exploring Random Trees (RRT) through our algorithm W-Safe RRT. To acknowledge distributional uncertainty and poor modeling, W-Safe RRT uses the Wasserstein metric to provide a probabilistic bound on the distributional distance between a robot and obstacles. Human-interpretable environmental agent classification allows online safety margin adaptation. We propose and analyze an integrating region method for online classification that increases actor labeling accuracy based on behavioral feature values when compared to state of the art methods. The method performs class assignments based on local maximum likelihood in a created behavioral feature-space, allowing a notion of classification uncertainty. Model-based methods with safety guarantees can quickly become computationally in tractable, especially with multiple agents, higher dimensions, and plentiful unknowns. Sampling based algorithms have been parallelized for computation with multi-core computers and GPUs. We consider the use of quantum algorithms and computers for sampling-based motion planning for the first time. Quantum computing performs operations on superpositions of states and can solve certain problems much more efficiently than classical computers, but introduces previously unseen challenges. With Quantum-RRT, we recast the motion planning problem into a database-search structure and use Quantum Amplitude Amplification to find reachable states in the database with a quadratic performance increase over classical methods. We address two error sources with this method: quantum measurement and quantum oracle errors. We then extend this method to Parallel Quantum-RRT, which uses a manager-worker architecture with multiple parallel quantum workers to increase database search efficiency. We compare algorithm architectures and characterize probabilities of multiple workers finding solutions. Lastly, we test in simulation the quantum algorithms against classical versions in a wide variety of scenarios, concluding that a similar parallelization improvement is to be found in the quantum case as was found in the parallelization of classical RRT.

97 MATHEMATICS AND COMPUTING↗

The Young Massive Star Cluster Westerlund 2 Observed with MUSE. III. A Cluster in Motion—The Complex Internal Dynamics

Analyzing the dynamical state of nearby young massive star clusters is essential for understanding star cluster formation and evolution during their earliest stages. In this work we analyze the stellar and gas kinematics of the young massive star cluster Westerlund 2 (Wd2) using data from the integral field unit Multi Unit Spectroscopic Explorer (MUSE) and complement them with proper motions from the Gaia DR2. The mean gas radial velocity of 15.9 km s{sup −1} agrees with the assumption that Wd2 is the result of a cloud–cloud collision. The gas motions show the expansion of the H ii region, driven by the radiation from the many OB stars in the cluster center. The velocity profile of the cluster member stars reveals an increasing velocity dispersion with decreasing stellar mass and that the low-mass stars show five distinct velocity groups. Based on their spatial correlation with the cluster’s two clumps, we concluded that this is the imprint of the initial cloud collapse that formed Wd2. A thorough analysis of the dynamical state of Wd2, which determines a dynamical mass range of M {sub dyn,Wd2} = (7.5 ± 1.9) × 10{sup 4} − (4.4 ± 1.1) × 10{sup 5} M {sub ⊙} and exceeds the photometric mass by at least a factor of two, leads to the conclusion that Wd2 is not massive enough to remain gravitationally bound. Additionally we also identify 22 runaway candidates with peculiar velocities between 30 and 546 km s{sup −1}.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Quantifying Single-Ion Transport in Percolated Ionic Aggregates of Polymer Melts

Single-ion conducting polymers such as ionomers are promising battery electrolyte materials, but it is critical to understand how rates and mechanisms of free cation transport depend on the nanoscale aggregation of cations and polymer-bound anions. We perform coarse-grained molecular dynamics simulations of ionomer melts to understand cation mobility as a function of polymer architecture, background relative permittivity, and corresponding ionic aggregate morphology. In systems exhibiting percolated ionic aggregates, cations diffuse via stepping motions along the ionic aggregates. These diffusivities can be quantitatively predicted by calculating the lifetimes of continuous association between oppositely charged ions, which equal the time scales of the stepping (diffusive) motions. In contrast, predicting cation diffusivity for systems with isolated ionic aggregates requires another time scale. Finally, our results suggest that to improve conductivity the Coulombic interaction strength should be strong enough to favor percolated aggregates but weak enough to facilitate ion dissociation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Grand challenges in the design, manufacture, and operation of future wind turbine systems

Abstract. Wind energy is foundational for achieving 100 % renewable electricity production, and significant innovation is required as the grid expands and accommodates hybrid plant systems, energy-intensive products such as fuels, and a transitioning transportation sector. The sizable investments required for wind power plant development and integration make the financial and operational risks of change very high in all applications but especially offshore. Dependence on a high level of modeling and simulation accuracy to mitigate risk and ensure operational performance is essential. Therefore, the modeling chain from the large-scale inflow down to the material microstructure, and all the steps in between, needs to predict how the wind turbine system will respond and perform to allow innovative solutions to enter commercial application. Critical unknowns in the design, manufacturing, and operability of future turbine and plant systems are articulated, and recommendations for research action are laid out. This article focuses on the many unknowns that affect the ability to push the frontiers in the design of turbine and plant systems. Modern turbine rotors operate through the entire atmospheric boundary layer, outside the bounds of historic design assumptions, which requires reassessing design processes and approaches. Traditional aerodynamics and aeroelastic modeling approaches are pressing against the limits of applicability for the size and flexibility of future architectures and flow physics fundamentals. Offshore wind turbines have additional motion and hydrodynamic load drivers that are formidable modeling challenges. Uncertainty in turbine wakes complicates structural loading and energy production estimates, both around a single plant and for downstream plants, which requires innovation in plant operations and flow control to achieve full energy capture and load alleviation potential. Opportunities in co-design can bring controls upstream into design optimization if captured in design-level models of the physical phenomena. It is a research challenge to integrate improved materials into the manufacture of ever-larger components while maintaining quality and reducing cost. High-performance computing used in high-fidelity, physics-resolving simulations offer opportunities to improve design tools through artificial intelligence and machine learning, but even the high-fidelity tools are yet to be fully validated. Finally, key actions needed to continue the progress of wind energy technology toward even lower cost and greater functionality are recommended.

17 WIND ENERGY↗

Structure of the human cation–chloride cotransport KCC1 in an outward-open state

Cation–chloride cotransporters (CCCs) catalyze electroneutral symport of Cl - with Na + and/or K + across membranes. CCCs are fundamental in cell volume homeostasis, transepithelia ion movement, maintenance of intracellular Cl - concentration, and neuronal excitability. Here, we present a cryoelectron microscopy structure of human K + –Cl - cotransporter (KCC)1 bound with the VU0463271 inhibitor in an outward-open state. In contrast to many other amino acid–polyamine–organocation transporter cousins, our first outward-open CCC structure reveals that opening the KCC1 extracellular ion permeation path does not involve hinge-bending motions of the transmembrane (TM) 1 and TM6 half-helices. Instead, rocking of TM3 and TM8, together with displacements of TM4, TM9, and a conserved intracellular loop 1 helix, underlie alternate opening and closing of extracellular and cytoplasmic vestibules. We show that KCC1 intriguingly exists in one of two distinct dimeric states via different intersubunit interfaces. Our studies provide a blueprint for understanding the mechanisms of CCCs and their inhibition by small molecule compounds.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Phonon-Induced Localization of Excitons in Molecular Crystals from First Principles

The spatial extent of excitons in molecular systems underpins their photophysics and utility for optoelectronic applications. Phonons are reported to lead to both exciton localization and delocalization. However, a microscopic understanding of phonon-induced (de)localization is lacking, in particular, how localized states form, the role of specific vibrations, and the relative importance of quantum and thermal nuclear fluctuations. Here, we present a first-principles study of these phenomena in solid pentacene, a prototypical molecular crystal, capturing the formation of bound excitons, exciton-phonon coupling to all orders, and phonon anharmonicity, using density functional theory, the ab initio GW-Bethe-Salpeter equation approach, finite-difference, and path integral techniques. In this study, we find that for pentacene zero-point nuclear motion causes uniformly strong localization, with thermal motion providing additional localization only for Wannier-Mott-like excitons. Anharmonic effects drive temperature-dependent localization, and, while such effects prevent the emergence of highly delocalized excitons, we explore the conditions under which these might be realized

74 ATOMIC AND MOLECULAR PHYSICS↗

Portal Monitoring Considerations for Treaty Verification Applications

Portal monitoring is one method in a suite of options for treaty verification and can assist in verification of treaty accountable items (TAIs). Portal monitor technology spans a wide range of sensors, including radiation detectors, break-beams, or weight sensors. For radiation-detecting portal monitors, they are able to confirm absence / presence of a radiological signature and to track TAI direction of motion. Portal monitoring uses measurements from strategically placed sensors (e.g., radiation detectors) to record the entry or egress of TAIs. The implementation of portal monitoring relies on three key elements: perimeter definition, portal locations, and sensor technology, and can be implemented in either time-bound or continuous operations depending on what is permitted by the Treaty.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗