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Deep Space navigation for the BioSentinel spacecraft science orbit

BioSentinel is an astrobiology small spacecraft mission. The payload consists of two parts, the first has optical and microfluidics sensors, and the second is a Linear Energy Transfer spectrometer that has the objective to measure deep space radiation from events such as coronal mass ejections. The goal of the mission is to observe potential DNA damage due to the radiation in heliocentric space on the living organism Saccharomyces cerevisiae, which is a budding yeast. Two types of this living organism are included in the payload. The first is a natural type that is more radiation tolerant, while the second is a mutant strain that has a deficiency in a gene that allows DNA repair once damage occurs. The impact caused by the radiation on the DNA is compared to an identical sample aboard the International Space Station, as well as another identical sample at a laboratory on the ground. The BioSentinel mission consists of a 6U CubeSat currently ,as of January 2024, active in heliocentric orbit. The spacecraft was launched aboard the first SLS flight as part of the Artemis-I campaign in November 2022. After successful deployment from the launch vehicle, it performed a lunar flyby with an altitude of 406 km. The delta-V imparted by the flyby provided the necessary energy to achieve a heliocentric orbit, in an Earth-trailing pattern. The navigation analysis consisted of a Kalman-filter that utilized data from the Deep Space Network and the ESA Estrack network. All those antennas were needed since the Artemis-1 campaign included the deployment of several other cubesats, therefore the scheduling process required more antenna assets than usual due to simultaneous demands from various missions. The processed tracking data was later also refined with a smoother in order to obtain a more accurate solution. The type of tracking data included TCP, Sequential Range, Doppler and Range formats. The solar radiation pressure coefficient, as well as the delta-V from the deployment and the flyby were modeled to obtain suitable solutions that could decrease the position and velocity uncertainties at several steps along the mission concept of operations. The final product each time resulted in updated ephemeris files that were used by the mission and the antenna networks as the mission progressed. Once in the final science orbit, the utilized antennas are only from the DSN network and the data format is bounded to just TCP. Regular orbit determination is performed, every two weeks. The spacecraft is in a nominal well-known orbit, performing regular operations. This paper includes an analysis of the final science orbit, the techniques and procedures utilized to perform orbit determination and a description of the overall navigation campaign produced during the mission and, more specifically, during the final science operations in Deep Space.

BioSentinel↗

Flight Experience and Lessons Learned From Biosentinel: A 6u Deep Space Cubesat

This paper reviews the flight experiences of the BioSentinel propulsion and At-titude Determination and Control System (ADCS) teams. BioSentinel, a 6U CubeSat, launched as a secondary aboard the Space Launch System (SLS) maid-en flight in November of 2022 and is now operating in an Earth trailing helio-centric orbit. The development and performance of a novel approach to gyro bias estimation in the spacecraft’s Sun safe controller is discussed in detail. Further-more, the development and in-flight experience with the spacecraft’s propulsion system is discussed. Finally, we present the development and execution of an angular momentum management approach developed in flight after a propulsion system valve failure.

BioSentinel↗

BioSentinel: Developing a Space Radiation Biosensor

BioSentinel is an autonomous fully self-contained science mission that will conduct the first study of the biological response to space radiation outside low Earth orbit (LEO) in over 40 years. The 4-unit (4U) BioSentinel biosensor system, is housed within a 6-Unit (6U) spacecraft, and uses yeast cells in multiple independent microfluidic cards to detect and measure DNA damage that occurs in response to ambient space radiation. Cell growth and metabolic activity will be measured using a 3-color LED detection system and a metabolic indicator dye with a dedicated thermal control system per fluidic card.

Radiation biosensor↗

BioSentinel: Enabling CubeSat-Scale Biogical Research Beyond Low Earth Orbit

The introduction of the Space Launch System will provide NASA with a new means of access to space beyond low Earth orbit (LEO), creating opportunities for scientific research in a range of spacecraft sizes. This presentation describes the preliminary design of the BioSentinel spacecraft, a CubeSat measuring 10cm x 20cm x 30cm, which has been manifested for launch on the maiden voyage of the Space Launch System in 2017. BioSentinel will provide the first direct experimental data from a biological study conducted beyond LEO in over forty years, which in turn will help to pave the way for future human exploration missions. The combination of an advanced biology payload with standard spacecraft bus components required for operation in deep space within a CubeSat form factor poses a unique challenge, and this paper will describe the early design trades under consideration. The baseline spacecraft design calls for the biology payload to occupy four cube-units of volume (denoted 4U), with all spacecraft bus components occupying the remaining 2U.

Space Biology↗

BioSentinel: Biosensors for Deep-Space Radiation Study

The BioSentinel mission will be deployed on NASA's Exploration Mission 1 (EM-1) in 2018. We will use the budding yeast, Saccharomyces cerevisiae, as a biosensor to study the effect of deep-space radiation on living cells. The BioSentinel mission will be the first investigation of a biological response to space radiation outside Low Earth Orbit (LEO) in over 40 years. Radiation can cause damage such as double stand breaks (DSBs) on DNA. The yeast cell was chosen for this mission because it is genetically controllable, shares homology with human cells in its DNA repair pathways, and can be stored in a desiccated state for long durations. Three yeast strains will be stored dry in multiple microfluidic cards: a wild type control strain, a mutant defective strain that cannot repair DSBs, and a biosensor strain that can only grow if it gets DSB-and-repair events occurring near a specific gene. Growth and metabolic activity of each strain will be measured by a 3-color LED optical detection system. Parallel experiments will be done on the International Space Station and on Earth so that we can compare the results to that of deep space. One of our main objectives is to characterize the microfluidic card activation sequence before the mission. To increase the sensitivity of yeast cells as biosensors, desiccated yeast in each card will be resuspended in a rehydration buffer. After several weeks, the rehydration buffer will be exchanged with a growth medium in order to measure yeast growth and metabolic activity. We are currently working on a time-course experiment to better understand the effects of the rehydration buffer on the response to ionizing radiation. We will resuspend the dried yeast in our rehydration medium over a period of time; then each week, we will measure the viability and ionizing radiation sensitivity of different yeast strains taken from this rehydration buffer. The data obtained in this study will be useful in finalizing the card activation sequence for this mission.

Yeast↗

Remodeling BioSentinel’s Microbial Metabolism Measurement System

BioSentinel, the first biological CubeSat beyond low Earth orbit, will investigate how Saccharomyces cerevisiae responds to ionizing radiation using optical measurements of a colorimetric metabolic indicator dye (alamarBlue). To map optical data to more detailed metabolic measurements, a microbial culture system for ground testing was designed consisting of a 400 mL beaker and a rubber stopper with pass-through holes for its five sensor probes (electrical conductivity, pH, oxidation-reduction potential, dissolved oxygen, optical density). The initial design had several drawbacks. It was only partially reusable due to its one-time sealants: Teflon tape and parafilm. A steady increase in oxygen levels within the sensor’s testingdata indicated the design was not sufficiently airtight. Degradation of the rubber stopper’s elasticity due to sterilization and reinsertion of the probes led to poor robustness and eventual replacement. The vessel’s large headspace didn’t reproduce flight conditions and a large culture volume required more reagents. The system has been redesigned to contain a rigid, biocompatible polycarbonate disc lid that allows for threaded inserts. The culture vessel’s height will be reduced from 110 mm to 65 mm to decrease overhead space and material costs. A more reliable seal will be achieved with a gasket and clamps. The optical probe records absorbance at four wavelengths to characterize cell density and alamarBlue dye ratios. A pneumatically operated plunger draws media through the hollow interior of the probe. Currently, deformation of the silicone on the plunger causes asymmetrical movement and a drift from its initial state. Designs are being developed to limit the plunger’s travel for a more accurate measurement cycle. The remodeled system is under construction and will be tested for leaks and accuracy. The measurements collected will be used to provide additional insight into the optical data returned from the BioSentinel mission.

Astrobiology↗

Microbial Optical Data Processing: A Key Step in the Metabolic Assessment of Lunar Explorer Instrument for Space Biology Applications (LEIA) and Biosentinel’s Payload Data

The BioSensor payload platform on BioSentinel and LEIA autonomously collects optical data from microbial model organisms in liquid culture. The BioSensor is designed to monitor metabolic activity using absorbance measurements of cell density and alamarBlue, a readily available colorimetric redox indicator dye. BioSentinel, a pioneering NASA CubeSat, uses yeast to study deep space radiation. LEIA investigates radiation and lunar gravity response. The experimental setup includes 16 wells equipped with three LEDs (570, 630, and 850 nm) and their corresponding photodetectors. One well is a calibration control without biology while the rest have desiccated cultures. Autonomous rehydration initiates the experiment. Data from the BioSensor are received from the flight and ground units, enabling comparison to uncover location-based metabolic rate variations. This study presents a Python Jupyter notebook developed for efficient data processing of multiple CSV files containing date and time columns, temperature, and well illumination data. It offers a user-friendly interface while maintaining computational power, automatically recognizing and iteratively processing data files in a user-input path. A Hampel filter with a short window eliminates outlier artifacts from sensor dropout. Because absorbance is a relative measurement, conversion from raw illumination requires defining a “blank” value, so the first data points are averaged to provide the necessary denominator. A cube-root function correction mitigates undesired drift caused by air pockets during the fluidic card filling phase, maintaining optical path length consistency. Beer-Lambert's law is applied to further convert absorbance values to cell and dye form concentrations, the desired science parameters. The processed data are saved and visualized as SVG plots. Future plans include extracting specific science parameters from the processed data like growth rate and metabolic rate, and identification of features corresponding to metabolic and phenotypic shifts such as starvation, shifts from aerobic to anaerobic growth, and osmotic stresses.

Space biology↗

Model Predictions of Radiation Environment for the NASA BioSentinel Mission

- In this work, models are used to predict the GCR exposure expected for the yeast payload and dosimeter on-board the BioSentinel for a six-month mission after deployment. - The model predictions from this work can be validated against the radiation measurements from the BioSentinel once the data have been transmitted to earth. - The methods used can be valuable for facilitating future projections within existing GCR models for planned deep space missions.

Shirin Rahmanian↗

Flight Experience and Lessons Learned from BioSentinel: A 6U Deep Space CubeSat

This presentation reviews the flight experiences of the BioSentinel propulsion and At-titude Determination and Control System (ADCS) teams. BioSentinel, a 6U CubeSat, launched as a secondary aboard the Space Launch System (SLS) maid-en flight in November of 2022 and is now operating in an Earth trailing helio-centric orbit. The development and performance of a novel approach to gyro bias estimation in the spacecraft’s Sun safe controller is discussed in detail. Further-more, the development and in-flight experience with the spacecraft’s propulsion system is discussed. Finally, we present the development and execution of an angular momentum management approach developed in flight after a propulsion system valve failure.

Jesse Fusco↗

BioSentinel ISS Control Experiment Investigation Summary Form

The main science objective of BioSentinel is to develop biosensors to study the effects of the space radiation environment on biological organisms. Given its similarities to human cells, we decided to use the budding yeast Saccharomyces cerevisiae. Yeast cells share homology to human cells, particularly in the response to DNA damage caused by ionizing radiation. Most importantly, yeast cells can be desiccated and survive in that form for long periods of time. Thus, budding yeast is the ideal model organism for long-term experiments in preparation for future manned missions to deep space. In addition to the ISS mission, our biosensors will fly in a nanosatellite designed for deep space, which is manifested to fly as a secondary payload onboard NASA’s Artemis-1 rocket.

BioSentinel↗

BioSentinel ISS Control Experiment Final Investigation Summary Form

Each payload has 18 fluidic cards and each fluidic card has 16 microfluidic wells, for a total of 288 wells. Card activation occurs at different time points throughout the 6-month mission and following ground commands. At each timepoint, two fluidic cards are filled with growth medium containing nutrients and a metabolic indicator dye. In addition to card filling, the temperature of the cards increases from ~4°C (stasis mode) to 23°C to allow for cell growth. The metabolic dye changes color from blue to pink, then pink to clearin the presence of metabolically active yeast cells. The colorimetric changes and cell growth are monitored using a 3-light-emitting diode(LED)optical detection system. The optical data determines how fast the cells are able to recover after accumulating radiation damage over time.After ground command initiation, all the fluidics, thermal and optical detection steps in BioSentinel are fully automated.The biosensor response data is compared to physical dosimetry data collected onboard the same payload. This dosimeter or linear energy transfer (LET)spectrometer is based on TimePix chip technology. This chip measures the total ionizing radiation dose in addition to calculating the LET of each particle that traverses its sensor, thus allowing researchers to characterize the radiation environment around the payload.The biological response (and physical dosimetry) on ISS over time is compared to the deep space mission and to data obtained on the ground.This analysis provides insight on the biological effects of the space radiation exposure in preparation for future long-duration missions to space and inhabitation beyond low-Earth orbit (LEO).

BioSentinel↗

BioSentinel SmallSat 2022 Presentation

BioSentinel, an Artemis-1 secondary spacecraft, will carry a biology experiment into deep space for the first time in 50 years. A 6U CubeSat form factor was utilized for the spacecraft and included technologies newly developed or adapted for operations beyond Earth orbit. This is the maiden deep-space voyage for the radio, propulsion system, electrical power system, and BioSensor payload. The spacecraft carries onboard budding yeast, Saccharomyces cerevisiae, as an analog to human cells to test the biological response to deep space radiation.

BioSentinel↗

Deep Space Navigation for the BioSentinel CubeSat Science Orbit

BioSentinel is a 6U CubeSat active in heliocentric orbit, as of April 2024. The spacecraft was launched aboard the first SLS flight as part of the Artemis-I campaign in November 2022. After successful separation from the upper stage of SLS, it performed a lunar flyby which provided the necessary energy to achieve an Earth-trailing heliocentric orbit. This paper includes a description of the final science orbit as well as its evolution, the techniques and procedures utilized to perform the orbit determination and a description of the overall navigation campaign, with emphasis on the heliocentric orbit operations.

Jose Alvarellos↗

BioSentinel

Develop a deep space tool with autonomous life support technologies to study the biological effects of the space radiation environment.

BioSentinel↗