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Integrated imaging experiment with C-SAR and other geological image data across the Nelson Front, Northern Manitoba

This paper presents preliminary results from the integration of geophysical and geological data sets using Bayesian statistical analysis with the purpose of mapping the Churchill-Superior Boundary zone. In the Wabowden area the contribution of each rock type to the aeromagnetic anomaly is judged by convolving the aeromagnetic anomaly value with the average magnetic susceptibility. The 'a posteriori' probabilities of significant patterns in the new data are then computed. The highest 'a posteriori' probability occurs along a narrow corridor whose trend coincides remarkably with the location of the Churchill-Superior Boundary Zone. In the Wekusko Lake area, C-SAR and TM data were integrated using an image analysis system. Here the emphasis is on mapping of geological structures.

Rao, G. S. K.↗

Correcting Satellite Image Derived Surface Model for Atmospheric Effects

This project was a continuation of the project entitled "Resolution Earth Surface Features from Repeat Moderate Resolution Satellite Imagery". In the previous study, a Bayesian Maximum Posterior Estimate (BMPE) algorithm was used to obtain a composite series of repeat imagery from the Advanced Very High Resolution Radiometer (AVHRR). The spatial resolution of the resulting composite was significantly greater than the 1 km resolution of the individual AVHRR images. The BMPE algorithm utilized a simple, no-atmosphere geometrical model for the short-wave radiation budget at the Earth's surface. A necessary assumption of the algorithm is that all non geometrical parameters remain static over the compositing period. This assumption is of course violated by temporal variations in both the surface albedo and the atmospheric medium. The effect of the albedo variations is expected to be minimal since the variations are on a fairly long time scale compared to the compositing period, however, the atmospheric variability occurs on a relatively short time scale and can be expected to cause significant errors in the surface reconstruction. The current project proposed to incorporate an atmospheric correction into the BMPE algorithm for the purpose of investigating the effects of a variable atmosphere on the surface reconstructions. Once the atmospheric effects were determined, the investigation could be extended to include corrections various cloud effects, including short wave radiation through thin cirrus clouds. The original proposal was written for a three year project, funded one year at a time. The first year of the project focused on developing an understanding of atmospheric corrections and choosing an appropriate correction model. Several models were considered and the list was narrowed to the two best suited. These were the 5S and 6S shortwave radiation models developed at NASA/GODDARD and tested extensively with data from the AVHRR instrument. Although the 6S model was a successor to the 5S and slightly more advanced, the 5S was selected because outputs from the individual components comprising the short-wave radiation budget were more easily separated. The separation was necessary since both the 5S and 6S did not include geometrical corrections for terrain, a fundamental constituent of the BMPE algorithm. The 5S correction code was incorporated into the BMPE algorithm and many sensitivity studies were performed.

Emery, William↗

Detection and recognition of simple spatial forms

A model of human visual sensitivity to spatial patterns is constructed. The model predicts the visibility and discriminability of arbitrary two-dimensional monochrome images. The image is analyzed by a large array of linear feature sensors, which differ in spatial frequency, phase, orientation, and position in the visual field. All sensors have one octave frequency bandwidths, and increase in size linearly with eccentricity. Sensor responses are processed by an ideal Bayesian classifier, subject to uncertainty. The performance of the model is compared to that of the human observer in detecting and discriminating some simple images.

Watson, A. B.↗

Brain segmentation and the generation of cortical surfaces

This paper describes methods for white matter segmentation in brain images and the generation of cortical surfaces from the segmentations. We have developed a system that allows a user to start with a brain volume, obtained by modalities such as MRI or cryosection, and constructs a complete digital representation of the cortical surface. The methodology consists of three basic components: local parametric modeling and Bayesian segmentation; surface generation and local quadratic coordinate fitting; and surface editing. Segmentations are computed by parametrically fitting known density functions to the histogram of the image using the expectation maximization algorithm [DLR77]. The parametric fits are obtained locally rather than globally over the whole volume to overcome local variations in gray levels. To represent the boundary of the gray and white matter we use triangulated meshes generated using isosurface generation algorithms [GH95]. A complete system of local parametric quadratic charts [JWM+95] is superimposed on the triangulated graph to facilitate smoothing and geodesic curve tracking. Algorithms for surface editing include extraction of the largest closed surface. Results for several macaque brains are presented comparing automated and hand surface generation. Copyright 1999 Academic Press.

NASA Discipline Neuroscience↗

Tests of the Grobner Basis Solution for Lightning Ground Flash Fraction Retrieval

Satellite lightning imagers such as the NASA Tropical Rainfall Measuring Mission Lightning Imaging Sensor (TRMM/LIS) and the future GOES-R Geostationary Lightning Mapper (GLM) are designed to detect total lightning (ground flashes + cloud flashes). However, there is a desire to discriminate ground flashes from cloud flashes from the vantage point of space since this would enhance the overall information content of the satellite lightning data and likely improve its operational and scientific applications (e.g., in severe weather warning, lightning nitrogen oxides studies, and global electric circuit analyses). A Bayesian inversion method was previously introduced for retrieving the fraction of ground flashes in a set of flashes observed from a satellite lightning imager. The method employed a constrained mixed exponential distribution model to describe the lightning optical measurements. To obtain the optimum model parameters (one of which is the ground flash fraction), a scalar function was minimized by a numerical method. In order to improve this optimization, a Grobner basis solution was introduced to obtain analytic representations of the model parameters that serve as a refined initialization scheme to the numerical optimization. In this study, we test the efficacy of the Grobner basis initialization using actual lightning imager measurements and ground flash truth derived from the national lightning network.

Koshak, William↗

The Statistical Consulting Center for Astronomy (SCCA)

The process by which raw astronomical data acquisition is transformed into scientifically meaningful results and interpretation typically involves many statistical steps. Traditional astronomy limits itself to a narrow range of old and familiar statistical methods: means and standard deviations; least-squares methods like chi(sup 2) minimization; and simple nonparametric procedures such as the Kolmogorov-Smirnov tests. These tools are often inadequate for the complex problems and datasets under investigations, and recent years have witnessed an increased usage of maximum-likelihood, survival analysis, multivariate analysis, wavelet and advanced time-series methods. The Statistical Consulting Center for Astronomy (SCCA) assisted astronomers with the use of sophisticated tools, and to match these tools with specific problems. The SCCA operated with two professors of statistics and a professor of astronomy working together. Questions were received by e-mail, and were discussed in detail with the questioner. Summaries of those questions and answers leading to new approaches were posted on the Web (www.state.psu.edu/ mga/SCCA). In addition to serving individual astronomers, the SCCA established a Web site for general use that provides hypertext links to selected on-line public-domain statistical software and services. The StatCodes site (www.astro.psu.edu/statcodes) provides over 200 links in the areas of: Bayesian statistics; censored and truncated data; correlation and regression, density estimation and smoothing, general statistics packages and information; image analysis; interactive Web tools; multivariate analysis; multivariate clustering and classification; nonparametric analysis; software written by astronomers; spatial statistics; statistical distributions; time series analysis; and visualization tools. StatCodes has received a remarkable high and constant hit rate of 250 hits/week (over 10,000/year) since its inception in mid-1997. It is of interest to scientists both within and outside of astronomy. The most popular sections are multivariate techniques, image analysis, and time series analysis. Hundreds of copies of the ASURV, SLOPES and CENS-TAU codes developed by SCCA scientists were also downloaded from the StatCodes site. In addition to formal SCCA duties, SCCA scientists continued a variety of related activities in astrostatistics, including refereeing of statistically oriented papers submitted to the Astrophysical Journal, talks in meetings including Feigelson's talk to science journalists entitled "The reemergence of astrostatistics" at the American Association for the Advancement of Science meeting, and published papers of astrostatistical content.

Akritas, Michael↗

Bayesian Fusion of Color and Texture Segmentations

In many applications one would like to use information from both color and texture features in order to segment an image. We propose a novel technique to combine "soft" segmentations computed for two or more features independently. Our algorithm merges models according to a mean entropy criterion, and allows to choose the appropriate number of classes for the final grouping. This technique also allows to improve the quality of supervised classification based on one feature (e.g. color) by merging information from unsupervised segmentation based on another feature (e.g., texture.)

Manduchi, Roberto↗

Data Processing for High-Contrast Imaging with the James Webb Space Telescope

The James Webb Space Telescope (JWST) will probe circumstellar environments at an unprecedented sensitivity.However, the performance of high-contrast imaging instruments is limited by the residual light from the star at close separations (<2-3”), where the incidence of exoplanets increases rapidly. There is currently no solution to get rid of the residual light down to the photon noise level at those separations, which may prevent some crucial discoveries. JWST’s debut is planned for October 2021 for a baseline mission lifetime of only five years. Thus,it is crucial to find a solution to this problem before its launch. We are further developing and implementing an innovative approach of post-processing built on a Bayesian framework that provides a more robust determination of faint astrophysical structures around a bright source. This approach uses a model of high-contrast imaging instrument that takes advantage of prior information, such as data from wavefront sensing (WFS) operations on JWST, to estimate simultaneously instrumental aberrations and the circumstellar environment. With this approach, our goal is to further improve the contrast gain over the contrast that can be achieved with JWST instruments, starting with NIRCam imaging and coronagraphic imaging. This work will pave the way for the future space-based high-contrast imaging instruments such as the Nancy Grace Roman Space Telescope Coronagraph Instrument (Roman CGI). This technique will be crucial to make the best use of the telemetry data that will be collected during the CGI operations.

Jewell, Jeffrey B.↗

Defining Change Thresholds: What Change Is Outside Typical Sources of Variation?

Researchers often have a difficult time defining meaningful thresholds for change. We sometimes identify subtle changes but what amount of change is beyond typical sources of variation? This is especially complicated when trying to understand new disease pathogenesis like the constellation of eye changes leading to Spaceflight-associated Neuro-ocular Syndrome (SANS). To support decision makers in defining minimal meaningful change, we used a Bayesian hierarchical model to estimate innate sources of variability such as natural day to day variation. Healthy subjects were recruited and imaged with MRI, OCT, and US on separate days and measured by several technicians. Models were developed specifying random effects for the sources of variation – between left and right eyes, within-individuals over time, between raters, and finally between individuals. This allowed us to find the posterior distribution for the total typical variation, within an eye, which we use to define a threshold where change beyond typical sources of variation is likely. This threshold is now used as our earliest indicator of systematic increase in Total Retinal Thickness (a precursor to optic disc edema).

Millennia Young↗

The footprints of visual attention in the Posner cueing paradigm revealed by classification images

In the Posner cueing paradigm, observers' performance in detecting a target is typically better in trials in which the target is present at the cued location than in trials in which the target appears at the uncued location. This effect can be explained in terms of a Bayesian observer where visual attention simply weights the information differently at the cued (attended) and uncued (unattended) locations without a change in the quality of processing at each location. Alternatively, it could also be explained in terms of visual attention changing the shape of the perceptual filter at the cued location. In this study, we use the classification image technique to compare the human perceptual filters at the cued and uncued locations in a contrast discrimination task. We did not find statistically significant differences between the shapes of the inferred perceptual filters across the two locations, nor did the observed differences account for the measured cueing effects in human observers. Instead, we found a difference in the magnitude of the classification images, supporting the idea that visual attention changes the weighting of information at the cued and uncued location, but does not change the quality of processing at each individual location.

Non-NASA Center↗

Mapping of taiga forest units using AIRSAR data and/or optical data, and retrieval of forest parameters

A maximum a posteriori Bayesian classifier for multifrequency polarimetric SAR data is used to perform a supervised classification of forest types in the floodplains of Alaska. The image classes include white spruce, balsam poplar, black spruce, alder, non-forests, and open water. The authors investigate the effect on classification accuracy of changing environmental conditions, and of frequency and polarization of the signal. The highest classification accuracy (86 percent correctly classified forest pixels, and 91 percent overall) is obtained combining L- and C-band frequencies fully polarimetric on a date where the forest is just recovering from flooding. The forest map compares favorably with a vegetation map assembled from digitized aerial photos which took five years for completion, and address the state of the forest in 1978, ignoring subsequent fires, changes in the course of the river, clear-cutting of trees, and tree growth. HV-polarization is the most useful polarization at L- and C-band for classification. C-band VV (ERS-1 mode) and L-band HH (J-ERS-1 mode) alone or combined yield unsatisfactory classification accuracies. Additional data acquired in the winter season during thawed and frozen days yield classification accuracies respectively 20 percent and 30 percent lower due to a greater confusion between conifers and deciduous trees. Data acquired at the peak of flooding in May 1991 also yield classification accuracies 10 percent lower because of dominant trunk-ground interactions which mask out finer differences in radar backscatter between tree species. Combination of several of these dates does not improve classification accuracy. For comparison, panchromatic optical data acquired by SPOT in the summer season of 1991 are used to classify the same area. The classification accuracy (78 percent for the forest types and 90 percent if open water is included) is lower than that obtained with AIRSAR although conifers and deciduous trees are better separated due to the presence of leaves on the deciduous trees. Optical data do not separate black spruce and white spruce as well as SAR data, cannot separate alder from balsam poplar, and are of course limited by the frequent cloud cover in the polar regions. Yet, combining SPOT and AIRSAR offers better chances to identify vegetation types independent of ground truth information using a combination of NDVI indexes from SPOT, biomass numbers from AIRSAR, and a segmentation map from either one.

Rignot, Eric↗

A Ground Flash Fraction Retrieval Algorithm for GLM

A Bayesian inversion method is introduced for retrieving the fraction of ground flashes in a set of N lightning observed by a satellite lightning imager (such as the Geostationary Lightning Mapper, GLM). An exponential model is applied as a physically reasonable constraint to describe the measured lightning optical parameter distributions. Population statistics (i.e., the mean and variance) are invoked to add additional constraints to the retrieval process. The Maximum A Posteriori (MAP) solution is employed. The approach is tested by performing simulated retrievals, and retrieval error statistics are provided. The approach is feasible for N greater than 2000, and retrieval errors decrease as N is increased.

Koshak, William J.↗

Precipitation and Latent Heating Distributions from Satellite Passive Microwave Radiometry: Method and Uncertainties - Part 1

A revised Bayesian algorithm for estimating surface rain rate, convective rain proportion, and latent heating/drying profiles from satellite-borne passive microwave radiometer observations over ocean backgrounds is described. The algorithm searches a large database of cloud-radiative model simulations to find cloud profiles that are radiatively consistent with a given set of microwave radiance measurements. The properties of these radiatively consistent profiles are then composited to obtain best estimates of the observed properties. The revised algorithm is supported by an expanded and more physically consistent database of cloud-radiative model simulations. The algorithm also features a better quantification of the convective and non-convective contributions to total rainfall, a new geographic database, and an improved representation of background radiances in rain-free regions. Bias and random error estimates are derived from applications of the algorithm to synthetic radiance data, based upon a subset of cloud resolving model simulations, and from the Bayesian formulation itself. Synthetic rain rate and latent heating estimates exhibit a trend of high (low) bias for low (high) retrieved values. The Bayesian estimates of random error are propagated to represent errors at coarser time and space resolutions, based upon applications of the algorithm to TRMM Microwave Imager (TMI) data. Errors in instantaneous rain rate estimates at 0.5 deg resolution range from approximately 50% at 1 mm/h to 20% at 14 mm/h. These errors represent about 70-90% of the mean random deviation between collocated passive microwave and spaceborne radar rain rate estimates. The cumulative algorithm error in TMI estimates at monthly, 2.5 deg resolution is relatively small (less than 6% at 5 mm/day) compared to the random error due to infrequent satellite temporal sampling (8-35% at the same rain rate).

Olson, William S.↗

Precipitation and Latent Heating Distributions from Satellite Passive Microwave Radiometry: Improved Method and Uncertainties - Part 1

A revised Bayesian algorithm for estimating surface rain rate, convective rain proportion, and latent heating profiles from satellite-borne passive microwave radiometer observations over ocean backgrounds is described. The algorithm searches a large database of cloud-radiative model simulations to find cloud profiles that are radiatively consistent with a given set of microwave radiance measurements. The properties of these radiatively consistent profiles are then composited to obtain best estimates of the observed properties. The revised algorithm is supported by an expanded and more physically consistent database of cloud-radiative model simulations. The algorithm also features a better quantification of the convective and nonconvective contributions to total rainfall, a new geographic database, and an improved representation of background radiances in rain-free regions. Bias and random error estimates are derived from applications of the algorithm to synthetic radiance data, based upon a subset of cloud-resolving model simulations, and from the Bayesian formulation itself. Synthetic rain-rate and latent heating estimates exhibit a trend of high (low) bias for low (high) retrieved values. The Bayesian estimates of random error are propagated to represent errors at coarser time and space resolutions, based upon applications of the algorithm to TRMM Microwave Imager (TMI) data. Errors in TMI instantaneous rain-rate estimates at 0.5 -resolution range from approximately 50% at 1 mm/h to 20% at 14 mm/h. Errors in collocated spaceborne radar rain-rate estimates are roughly 50%-80% of the TMI errors at this resolution. The estimated algorithm random error in TMI rain rates at monthly, 2.5deg resolution is relatively small (less than 6% at 5 mm day.1) in comparison with the random error resulting from infrequent satellite temporal sampling (8%-35% at the same rain rate). Percentage errors resulting from sampling decrease with increasing rain rate, and sampling errors in latent heating rates follow the same trend. Averaging over 3 months reduces sampling errors in rain rates to 6%-15% at 5 mm day.1, with proportionate reductions in latent heating sampling errors.

Olson, William S.↗

The Gemini NICI Planet-Finding Campaign: The Offset Ring of HR 4796 A

We present J, H, CH4 short (1.578 micrometers), CH4 long (1.652 micrometers) and K(sub s)-band images of the dust ring around the 10 Myr old star HR 4796 A obtained using the Near Infrared Coronagraphic Imager (NICI) on the Gemini-South 8.1 m Telescope. Our images clearly show for the first time the position of the star relative to its circumstellar ring thanks to NICI's translucent focal plane occulting mask. We employ a Bayesian Markov chain Monte Carlo method to constrain the offset vector between the two. The resulting probability distribution shows that the ring center is offset from the star by 16.7 +/- 1.3 milliarcseconds along a position angle of 26 +/- 3deg, along the PA of the ring, 26.47 +/- 0.04deg. We find that the size of this offset is not large enough to explain the brightness asymmetry of the ring. The ring is measured to have mostly red reflectivity across the JHKs filters, which seems to indicate micron-sized grains. Just like Neptune's 3:2 and 2:1 mean-motion resonances delineate the inner and outer edges of the classical Kuiper belt, we find that the radial extent of the HR 4796 A and the Fomalhaut rings could correspond to the 3:2 and 2:1 mean-motion resonances of hypothetical planets at 54.7 AU and 97.7 AU in the two systems, respectively. A planet orbiting HR 4796 A at 54.7 AU would have to be less massive than 1.6 Jup mass so as not to widen the ring too much by stirring.

Near Infrared Coronagraphic Imager (NICI)↗

Obtaining the Grobner Initialization for the Ground Flash Fraction Retrieval Algorithm

At optical wavelengths and from the vantage point of space, the multiple scattering cloud medium obscures one's view and prevents one from easily determining what flashes strike the ground. However, recent investigations have made some progress examining the (easier, but still difficult) problem of estimating the ground flash fraction in a set of N flashes observed from space In the study by Koshak, a Bayesian inversion method was introduced for retrieving the fraction of ground flashes in a set of flashes observed from a (low earth orbiting or geostationary) satellite lightning imager. The method employed a constrained mixed exponential distribution model to describe the lightning optical measurements. To obtain the optimum model parameters, a scalar function of three variables (one of which is the ground flash fraction) was minimized by a numerical method. This method has formed the basis of a Ground Flash Fraction Retrieval Algorithm (GoFFRA) that is being tested as part of GOES-R GLM risk reduction.

Solakiewicz, R.↗

OGLE-2013-BLG-1761Lb: A Massive Planet around an MK Dwarf

We report the discovery and the analysis of the planetary microlensing event, OGLE-2013-BLG-1761. There are some degenerate solutions in this event because the planetary anomaly is only sparsely sampled. However, the detailed light curve analysis ruled out all stellar binary models and shows the lens to be a planetary system. There is the so-called close wide degeneracy in the solutions with the planet host mass ratio of q approx.(7.0+/-2.0) x 10(exp -3) and q approx.(8.1+/-2.6) x 10(exp -3) with the projected separation in Einstein radius units of s = 0.95 (close) and s = 1.18(wide), respectively. The microlens parallax effect is not detected, but the finite source effect is detected. Our Bayesian analysis indicates that the lens system is located -D(sub L) = 6.9(+ 1.0 -1.2)kpc away from us and the host star is an M/K dwarf with amass of M(sub L) = 0.33(+ 0.32- 1.9)Stellar Mass orbited by a super-Jupiter mass planet with a mass of m(sub p) = 2.7(+ 2.5 - 1.5) M(sub Jup) at the projected separation of a(sub l) = 1.8(+ 0.5 -0.5)au. The preference of the large lens distance in the Bayesian analysis is due to the relatively large observed source star radius. The distance and other physical parameters may be constrained by the future high-resolution imaging by large ground telescopes or HST. If the estimated lens distance is correct, then this planet provides another sample for testing the claimed deficit of planets in the Galactic bulge.

Hirao, Y.↗

OGLE-2018-BLG-1185b: A Low-mass Microlensing Planet Orbiting a Low-mass Dwarf

We report an analysis of the planetary microlensing event OGLE-2018-BLG-1185, which was observed by a large number of ground-based telescopes and by the Spitzer Space Telescope. The ground-based light curve indicates a low planet–host star mass ratio ofq=(6.9±0.2)×10−5, which is near the peak of the wide-orbit exoplanet mass-ratio distribution. We estimate the host star and planet masses with a Bayesian analysis using the measured angular Einstein radius under the assumption that stars of all masses have an equal probability of hosting the planet. The flux variation observed by Spitzer is marginal, but still places a constraint on the microlens parallax. Imposing a conservative constraint that this flux variation should beΔfSpz<4 instrumental flux units yields a host mass of=-+MM0.37 host 0.210.35 and a planet mass of =-+ÅmM8.4p4.77.9. A Bayesian analysis including the full parallax constraint from Spitzer suggests smaller host star and planet masses of =-+MM0.091 host 0.0180.064 and =-+ÅmM2.1p0.41.5, respectively. Future high-resolution imaging observations with the Hubble Space Telescope or Extremely Large Telescope could distinguish between these two scenarios and help reveal the planetary system properties in more detail.

Gravitational microlensing↗