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At least 55 records · Page 3

Uncertainty Quantification for Multiphase Computational Fluid Dynamics Closure Relations with a Physics-Informed Bayesian Approach

Multiphase Computational Fluid Dynamics (MCFD) based on the two-fluid model is considered a promising tool to model complex two-phase flow systems. MCFD simulation can predict local flow features without resolving interfacial information. As a result, the MCFD solver relies on closure relations to describe the interaction between the two phases. Those empirical or semi-mechanistic closure relations constitute a major source of uncertainty for MCFD predictions. In this paper, we leverage a physics-informed uncertainty quantification (UQ) approach to inversely quantify the closure relations’ model form uncertainty in a physically consistent manner. This proposed approach considers the model form uncertainty terms as stochastic fields that are additive to the closure relation outputs. Combining dimensionality reduction and Gaussian processes, the posterior distribution of the stochastic fields can be effectively quantified within the Bayesian framework with the support of experimental measurements. As this UQ approach is fully integrated into the MCFD solving process, the physical constraints of the system can be naturally preserved in the UQ results. Here, in a case study of adiabatic bubbly flow, we demonstrate that this UQ approach can quantify the model form uncertainty of the MCFD interfacial force closure relations, thus effectively improving the simulation results with relatively sparse data support.

42 ENGINEERING↗

How Well Do We Know the Neutron-Matter Equation of State at the Densities Inside Neutron Stars? A Bayesian Approach with Correlated Uncertainties

Here, we introduce a new framework for quantifying correlated uncertainties of the infinite-matter equation of state derived from chiral effective field theory (𝜒⁢EFT ). Bayesian machine learning via Gaussian processes with physics-based hyperparameters allows us to efficiently quantify and propagate theoretical uncertainties of the equation of state, such as 𝜒⁢EFT truncation errors, to derived quantities. We apply this framework to state-of-the-art many-body perturbation theory calculations with nucleon-nucleon and three-nucleon interactions up to fourth order in the 𝜒⁢EFT expansion. This produces the first statistically robust uncertainty estimates for key quantities of neutron stars. We give results up to twice nuclear saturation density for the energy per particle, pressure, and speed of sound of neutron matter, as well as for the nuclear symmetry energy and its derivative. At nuclear saturation density, the predicted symmetry energy and its slope are consistent with experimental constraints.

79 ASTRONOMY AND ASTROPHYSICS↗

Software models: A Bayesian approach to parameter estimation in the Jelenski-Moranda software reliability model

Maximum likelihood estimation procedures for the Jelinski-Moranda software reliability model often give misleading answers. A reparameterization and a Bayesian analysis eliminate some of the problems incurred by MLE methods and often give better predictions on sets of real and simulated data. Practical difficulties in estimating the initial number of errors N and the failure rate of each error phi by the method of maximum likelihood are: N, the MLE of N, is occasionally infinite (i.e., the routines for calculating N and phi do not converge). It is shown that N is finite sub i only if the regression line of the interevent times t sub i vs. i has positive slope. A serious problem is that often N approximates n, the sample size, and sometimes N = n. Thus the MLE predicts that the program is perfect even when it is far from being so. Only when almost all failures have been removed can N and phi be trusted near the end of debugging.

Littlewood, B.↗

Bayesian approach to model-based extrapolation of nuclear observables

Here, we considered 10 global models based on nuclear density functional theory with realistic energy density functionals as well as two more phenomenological mass models. The emulators of two-neutron separation energy residuals and Bayesian confidence intervals defining theoretical error bars were constructed using Bayesian Gaussian processes and Bayesian neural networks. By establishing statistical methodology and parameters, we carried out extrapolations toward the two-neutron dripline. While both Gaussian processes (GP) and Bayesian neural networks reduce the root-mean-square (rms) deviation from experiment significantly, GP offers a better and much more stable performance. The increase in the predictive power of microscopic models aided by the statistical treatment is quite astonishing: The resulting rms deviations from experiment on the testing dataset are similar to those of more phenomenological models. The estimated credibility intervals on predictions make it possible to evaluate predictive power of individual models and also make quantified predictions using groups of models. The proposed robust statistical approach to extrapolation of nuclear model results can be useful for assessing the impact of current and future experiments in the context of model developments. The new Bayesian capability to evaluate residuals is also expected to impact research in the domains where experiments are currently impossible, for instance, in simulations of the astrophysical r process.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Improving the Parameterization of Cloud and Rain Microphysics in E3SM using Novel Observationally-Constrained Bayesian Approach (Final Technical Report)

In this project, we sought to develop new cloud and rain microphysics frameworks within the Energy Exascale Earth System Model (E3SM). This work encompassed two primary avenues of research: 1) Further development of a Bayesian-based scheme called BOSS (Bayesian Observationally-constrained Statistical-physical Scheme) to represent cloud and rain microphysics, testing it in realistic high-resolution cloud models, and implementing it in E3SM; 2) Development of a methodology utilizing machine learning to enable computationally tractable use of tractable use of Markov chain Monte Carlo sampling for Bayesian parameter estimation in Earth system and cloud models. In this project, we adapted the BOSS microphysics scheme, originally formulated for rain-only, to include all liquid-phase microphysical processes for cloud and rain, in particular the processes that mediate between these two categories, for example the conversion from cloud to rain through collision and coalescence of drops. We constrained the scheme via comparison and testing against a detailed model that explicitly represents the evolution of cloud and rain particles, called a bin microphysics scheme.

54 ENVIRONMENTAL SCIENCES↗

Joint estimation of biogeochemical model parameters from multiple experiments: A bayesian approach applied to mercury methylation

Here, to characterize complex biogeochemical systems, results from multiple experiments, where each targets a specific subprocess, are commonly combined. The resulting datasets are interpreted through the calibration of biogeochemical models for process inference and predictions. Commonly used calibration approaches of fitting datasets from individual experiments to subprocess models one at a time is prone to missing information shared between datasets and incomplete uncertainty propagation. We propose a Bayesian joint-fitting scheme addressing the above-mentioned concerns by jointly fitting all the available datasets, thus calibrating the entire biogeochemical model in one go using Markov Chain Monte Carlo (MCMC). The identification of null spaces in the parameter distributions from MCMC guided the simplification of certain subprocess models. For example, fast kinetic sorption was replaced by equilibrium sorption, and Monod demethylation was replaced by first-order demethylation. Joint fitting of datasets resulted in complete uncertainty propagation with parameter estimates informed by all available data.

54 ENVIRONMENTAL SCIENCES↗

Identifying Circumgalactic Medium Absorption in QSO Spectra: A Bayesian Approach

We present a study of candidate galaxy–absorber pairs for 43 low-redshift QSO sightlines (0.06 < z < 0.85) observed with the Hubble Space Telescope/Cosmic Origins Spectrograph that lie within the footprint of the Sloan Digital Sky Survey with a statistical approach to match absorbers with galaxies near the QSO lines of sight using only the SDSS Data Release 12 photometric data for the galaxies, including estimates of their redshifts. Our Bayesian methods combine the SDSS photometric information with measured properties of the circumgalactic medium to find the most probable galaxy match, if any, for each absorber in the line-of-sight QSO spectrum. We find ~630 candidate galaxy–absorber pairs using two different statistics. The methods are able to reproduce pairs reported in the targeted spectroscopic studies upon which we base the statistics at a rate of 72%. The properties of the galaxies comprising the candidate pairs have median redshift, luminosity, and stellar mass, all estimated from the photometric data, $z$ = 0.13, L = 0.1$L$ * , and $\mathrm{log}({M}_{* }/{M}_{\odot })=9.7$. The median impact parameter of the candidate pairs is ~430 kpc, or ~3.5 times the galaxy virial radius. The results are broadly consistent with the high Ly$α$ covering fraction out to this radius found in previous studies. In conclusion, this method of matching absorbers and galaxies can be used to prioritize targets for spectroscopic studies, and we present specific examples of promising systems for such follow-up.

79 ASTRONOMY AND ASTROPHYSICS↗

Point process algorithm: a new Bayesian approach for TPF-I planet signal extraction

TPF-I capability for planetary signal extraction, including both detection and spectral characterization, can be optimized by taking proper account of instrumental characteristics and astrophysical prior information. We have developed the Point Process Algorithm, a Bayesian technique for estracting planetary signals using the sine/cosine chopped outputs of a dual nulling interferometer.

stars↗

Model-Data for Joint Estimation of Biogeochemical Model Parameters from Multiple Experiments: A Bayesian Approach Applied to Mercury Methylation

This modeling archive supports the manuscript submitted for publication in the Environmental Modeling and Software. This study is supported by ORNL-SFA and IDEAS-Watershed. This study aims to improve calibration of complex biogeochemical models using datasets from multiple experiments targeting specific subprocesses. The proposed Bayesian joint-fitting scheme calibrates the entire biogeochemical model in one go using all the available datasets and estimate parameter uncertainties using Markov Chain Monte Carlo (MCMC). This allows for complete propagation of uncertainties and utilization of the information shared between different datasets. Mapping joint distribution of parameters guides model improvement by identifying null spaces in the parameter space. This archive contains files used to perform MCMC, post-process outputs and visualize results.

East Fork Poplar Creek↗

An Adaptive-Importance-Sampling-Enhanced Bayesian Approach for Topology Estimation in an Unbalanced Power Distribution System

The reliable operation of a power distribution system relies on a good prior knowledge of its topology and its system state. Although crucial, due to the lack of direct monitoring devices on the switch statuses, the topology information is often unavailable or outdated for the distribution system operators for real-time applications. Apart from the limited observability of the power distribution system, other challenges are the nonlinearity of the model, the complicated, unbalanced structure of the distribution system, and the scale of the system. To overcome the above challenges, we, in this paper, propose a Bayesian-inference framework that allows us to simultaneously estimate the topology and the state of a three-phase, unbalanced power distribution system. Specifically, by using the very limited number of measurements available that are associated with the forecast load data, we efficiently recover the full Bayesian posterior distributions of the system topology under both normal and outage operation conditions. This is performed through an adaptive importance sampling procedure that greatly alleviates the computational burden of the traditional Monte-Carlo (MC)-sampling-based approach while maintaining a good estimation accuracy. The simulations conducted on the IEEE 123-bus test system and an unbalanced 1282-bus system reveal the excellent performances of the proposed method.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Towards robust autonomous impedance spectroscopy analysis: A calibrated hierarchical Bayesian approach for electrochemical impedance spectroscopy (EIS) inversion

Distribution-based analyses, such as the distribution of relaxation times (DRT) and the distribution of diffusion times (DDT), present model-free alternatives to equivalent circuit modeling for analysis of electrochemical impedance spectroscopy (EIS) data. However, reconstructing such distributions from noisy impedance data is an ill-posed problem that must be solved with specialized inversion algorithms, requiring careful control and tuning. Furthermore, most inversion algorithms developed to date can only solve problems of limited complexity. Herein, we present a new hierarchical Bayesian method for EIS inversion, leveraging efficient algorithms for optimization and Hamiltonian Monte Carlo (HMC) sampling to solve models of arbitrary complexity. We overcome the challenge of ad-hoc parameter tuning by encoding intrinsic characteristics of the DRT and DDT into flexible prior distributions and “pre-calibrating” the model to simulated data. This approach is versatile, highly robust to noise, and provides quantitative estimates of both the error structure of the data and the uncertainty in the recovered distributions. The model is validated with simulated data to demonstrate accurate recovery of the DRT and the DDT. The method also shows promise for simultaneous recovery of multiple distributions, raising the intriguing possibility of semi-autonomous EIS analysis and ad-hoc model construction. Finally, the practical utility of the method is illustrated with experimental data. Throughout, we draw comparisons to several recently published EIS inversion methodologies.

36 MATERIALS SCIENCE↗

A Bayesian approach to reliability and confidence

The historical evolution of NASA's interest in quantitative measures of reliability assessment is outlined. The introduction of some quantitative methodologies into the Vehicle Reliability Branch of the Safety, Reliability and Quality Assurance (SR and QA) Division at Johnson Space Center (JSC) was noted along with the development of the Extended Orbiter Duration--Weakest Link study which will utilize quantitative tools for a Bayesian statistical analysis. Extending the earlier work of NASA sponsor, Richard Heydorn, researchers were able to produce a consistent Bayesian estimate for the reliability of a component and hence by a simple extension for a system of components in some cases where the rate of failure is not constant but varies over time. Mechanical systems in general have this property since the reliability usually decreases markedly as the parts degrade over time. While they have been able to reduce the Bayesian estimator to a simple closed form for a large class of such systems, the form for the most general case needs to be attacked by the computer. Once a table is generated for this form, researchers will have a numerical form for the general solution. With this, the corresponding probability statements about the reliability of a system can be made in the most general setting. Note that the utilization of uniform Bayesian priors represents a worst case scenario in the sense that as researchers incorporate more expert opinion into the model, they will be able to improve the strength of the probability calculations.

Barnes, Ron↗

A Bayesian Approach for Extracting Fluorescence Lifetimes from Sparse Data Sets and Its Significance for Imaging Experiments

The measurement of fluorescence lifetimes, especially in small sample volumes, presents the dual challenge of probing a small number of fluorophores and fitting the concomitant sparse data set to the appropriate excited-state decay function. A common method of analysis, such as the maximum likelihood (ML) technique, assumes a uniform probability distribution of the parameters describing the fluorescence decay function. An improvement is thus suggested by implementing a suitable nonuniform distribution, as is provided by a Bayesian framework, where the distribution of parameters is obtained from both their prior knowledge and the evidence-based likelihood of an event for a given set of parameters. We have also considered the Dirichlet prior distribution, whose mathematical form enables analytical solutions of the fitting parameters to be rapidly obtained. If Gaussian and exponential prior distributions are judiciously chosen, they reproduce the experimental target lifetime to within 20% with as few as 20 total photon counts for the data set, as does the Dirichlet prior distribution. But because of the analytical solutions afforded by the Dirichlet prior distribution, it is proposed to employ a Dirichlet prior to search parameter space rapidly to provide, if necessary, appropriate parameters for subsequent employment of a Gaussian or exponential prior distribution

97 MATHEMATICS AND COMPUTING↗

An Efficient Bayesian Approach to Learning Droplet Collision Kernels: Proof of Concept Using “Cloudy,” a New n -Moment Bulk Microphysics Scheme

The small-scale microphysical processes governing the formation of precipitation particles cannot be resolved explicitly by cloud resolving and climate models. Instead, they are represented by microphysics schemes that are based on a combination of theoretical knowledge, statistical assumptions, and fitting to data (“tuning”). Historically, tuning was done in an ad hoc fashion, leading to parameter choices that are not explainable or repeatable. Recent work has treated it as an inverse problem that can be solved by Bayesian inference. The posterior distribution of the parameters given the data—the solution of Bayesian inference—is found through computationally expensive sampling methods, which require over $\mathcal{O}$(10 5 ) evaluations of the forward model; this is prohibitive for many models. We present a proof of concept of Bayesian learning applied to a new bulk microphysics scheme named “Cloudy,” using the recently developed Calibrate-Emulate-Sample (CES) algorithm. Cloudy models collision-coalescence and collisional breakup of cloud droplets with an adjustable number of prognostic moments and with easily modifiable assumptions for the cloud droplet mass distribution and the collision kernel. The CES algorithm uses machine learning tools to accelerate Bayesian inference by reducing the number of forward evaluations needed to $\mathcal{O}$(10 2 ). It also exhibits a smoothing effect when forward evaluations are polluted by noise. In a suite of perfect-model experiments, we show that CES enables computationally efficient Bayesian inference of parameters in Cloudy from noisy observations of moments of the droplet mass distribution. In an additional imperfect-model experiment, a collision kernel parameter is successfully learned from output generated by a Lagrangian particle-based microphysics model.

54 ENVIRONMENTAL SCIENCES↗

A novel Bayesian approach for decomposing the radio emission of quasars: I. Modelling the radio excess in red quasars

ABSTRACT Studies show that both radio jets from the active galactic nuclei (AGNs) and the star formation (SF) activity in quasar host galaxies contribute to the quasar radio emission; yet their relative contributions across the population remain unclear. Here, we present an improved parametric model that allows us to statistically separate the SF and AGN components in observed quasar radio flux density distributions, and investigate how their relative contributions evolve with AGN bolometric luminosity ($L_\mathrm{bol}$) and redshift (z) using a fully Bayesian method. Based on the newest data from LOw-Frequency ARray Two-metre Sky Survey data release 2, our model gives robust fitting results out to $z\sim 4$, showing a quasar host galaxy SF rate (SFR) evolution that increases with bolometric luminosity and with redshift out to $z\sim 4$. This differs from the global cosmic SFR density, perhaps due to the importance of galaxy mergers. The prevalence of radio AGN emissions increases with quasar luminosity, but has little dependence on redshift. Furthermore, our new methodology and large sample size allow us to subdivide our data set to investigate the role of other parameters. Specifically, in this paper, we explore quasar colour and demonstrate that the radio excess in red quasars is due to an enhancement in AGN-related emission, since the host galaxy SF contribution to the total radio emission is independent of quasar colour. We also find evidence that this radio enhancement occurs mostly in quasars with weak or intermediate radio power.

Yue, B. -H (ORCID:0009000989352929)↗

A Bayesian Approach to Regional Decadal Predictability: Sparse Parameter Estimation in High-Dimensional Linear Inverse Models of High-Latitude Sea Surface Temperature Variability

Stochastic reduced models are an important tool in climate systems whose many spatial and temporal scales cannot be fully discretized or underlying physics may not be fully accounted for. One form of reduced model, the linear inverse model (LIM), has been widely used for regional climate predictability studies—typically focusing more on tropical or midlatitude studies. However, most LIM fitting techniques rely on point estimation techniques deriving from fluctuation–dissipation theory. In this methodological study we explore the use of Bayesian inference techniques for LIM parameter estimation of sea surface temperature (SST), to quantify the skillful decadal predictability of Bayesian LIM models at high latitudes. We show that Bayesian methods, when compared to traditional point estimation methods for LIM-type models, provide better calibrated probabilistic skill, while simultaneously providing better point estimates due to the regularization effect of the prior distribution in high-dimensional problems. We compare the effect of several priors, as well as maximum likelihood estimates, on 1) estimating parameter values on a perfect model experiment and 2) producing calibrated 1-yr SST anomaly forecast distributions using a preindustrial control run of the Community Earth System Model (CESM). Finally, we employ a host of probabilistic skill metrics to determine the extent to which an LIM can forecast SST anomalies at high latitudes. We find that the choice of prior distribution has an appreciable impact on estimation outcomes, and priors that emphasize physically relevant properties enhance the model’s ability to capture variability of SST anomalies.

54 ENVIRONMENTAL SCIENCES↗