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At least 523 records · Page 29

Utah FORGE: Discrete Fracture Network (DFN) Data

The FORGE team is making these fracture models available to researchers wanting a set of natural fractures in the FORGE reservoir for use in their own modeling work. They have been used to predict stimulation distances during hydraulic stimulation at the open toe section of well 16A(78)-32. These fracture sets are fully stochastic and do not contain the deterministic set that matches the pilot well 58-32 FMI data. Well 58-32 has been completed and 16A(78)-32 is to be drilled as part of Phase 3. The original .fab files are not included due to redundancy. The *.fabgz data for the 800m and 1200m depth areas are in the native FracMan format and have been compressed using Gzip. Filtered data for the 800m depth area includes .csv spreadsheets, native FracMan (.fab), and GOCAD (.ts) files that are in a compressed zip format. The file titled "SGW 2020 Finnila and Podgorney DFN fracture files on GDR.pdf" is a description of the data and should be reviewed prior to data use.

15 GEOTHERMAL ENERGY↗

Next Steps for Compressively Sensed Video in Transmission Electron Microscopy

Here, compressive sensing (CS) is a fast-emerging approach for improving data throughput by taking advantage of the inherent compressibility of real world data—the same kind of compressibility that allows millions of users to stream full-screen video without breaking the internet. Transmission electron microscope (TEM) users regularly collect multi-GB data sets and then use aggressive data reduction strategies to draw out the tiny residual of Shannon entropy that answers the question they wanted to ask. Much of the raw-byte-count information in an acquisition is random, redundant, or irrelevant, yet its collection still represents substantial cost in terms of instrumentation bandwidth and sample damage.

47 OTHER INSTRUMENTATION↗

The Behavior of IAPWS-95 from 250 to 300 K and Pressures up to 400 MPa: Evaluation Based on Recently Derived Property Data

Over the past several years, considerable scientific and technical interest has been focused on accurate thermodynamic properties of fluid water covering part of the subcooled (metastable) region and the stable liquid from the melting line up to about 300 K and pressures up to several hundred MPa. Between 2000 and 2010, experimental density data were published whose accuracy was not completely clear. The scientific standard equation of state for fluid water, the IAPWS-95 formulation, was developed on the basis of experimental data for thermodynamic properties that were available by 1995. In this work, it is examined how IAPWS-95 behaves with respect to the experimental data published after 1995. This investigation is carried out for temperatures from 250 to 300 K and pressures up to 400 MPa. The starting point is the assessment of the current data situation. This was mainly performed on the basis of data for the density, expansivity, compressibility, and isobaric heat capacity, which were derived in 2015 from very accurate speed-of-sound data. Apart from experimental data and these derived data, property values calculated from the recently published equation of state for this region of Holten et al. (2014) were also used. As a result, the unclear data situation could be clarified, and uncertainty values could be estimated for the investigated properties. In the region described above, detailed comparisons show that IAPWS-95 is able to represent the latest experimental data for the density, expansivity, compressibility, speed of sound, and isobaric heat capacity to within the uncertainties given in the release on IAPWS-95. Since the release does not contain uncertainty estimates for expansivities and compressibilities, the statement relates to the error propagation of the given uncertainty in density. Due to the lack of experimental data for the isobaric heat capacity for pressures above 100 MPa, no uncertainty estimates are given in the release for this pressure range. Results of the investigation of IAPWS-95 concerning its behavior with regard to the isobaric heat capacity in the high-pressure low-temperature region are also presented. Comparisons with very accurate speed-of-sound data published in 2012 showed that the uncertainty estimates of IAPWS-95 in speed of sound could be decreased for temperatures from 283 to 473 K and pressures up to 400 MPa.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A dedicated compression device for high resolution X-ray tomography of compressed gas diffusion layers

We present an experimental approach to study the three-dimensional microstructure of gas diffusion layer (GDL) materials under realistic compression conditions. A dedicated compression device was designed that allows for synchrotron-tomographic investigation of circular samples under well-defined compression conditions. The tomographic data provide the experimental basis for stochastic modeling of nonwoven GDL materials. A plain compression tool is used to study the fiber courses in the material at different compression stages. Transport relevant geometrical parameters, such as porosity, pore size, and tortuosity distributions, are exemplarily evaluated for a GDL sample in the uncompressed state and for a compression of 30 vol.%. To mimic the geometry of the flow-field, we employed a compression punch with an integrated channel-rib-profile. It turned out that the GDL material is homogeneously compressed under the ribs, however, much less compressed underneath the channel. GDL fibers extend far into the channel volume where they might interfere with the convective gas transport and the removal of liquid water from the cell.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

High pressure raman spectroscopy and X-ray diffraction of K2Ca(CO3)2 bütschliite: multiple pressure-induced phase transitions in a double carbonate

Abstract The crystal structure and bonding environment of K 2 Ca(CO 3 ) 2 bütschliite were probed under isothermal compression via Raman spectroscopy to 95 GPa and single crystal and powder X-ray diffraction to 12 and 68 GPa, respectively. A second order Birch-Murnaghan equation of state fit to the X-ray data yields a bulk modulus, $${K}_{0}=46.9$$ K 0 = 46.9 GPa with an imposed value of $${K}_{0}^{\prime}= 4$$ K 0 ′ = 4 for the ambient pressure phase. Compression of bütschliite is highly anisotropic, with contraction along the c -axis accounting for most of the volume change. Bütschliite undergoes a phase transition to a monoclinic C 2/ m structure at around 6 GPa, mirroring polymorphism within isostructural borates. A fit to the compression data of the monoclinic phase yields $${V}_{0}=322.2$$ V 0 = 322.2 Å 3 $$,$$ , $${K}_{0}=24.8$$ K 0 = 24.8 GPa and $${K}_{0}^{\prime}=4.0$$ K 0 ′ = 4.0 using a third order fit; the ability to access different compression mechanisms gives rise to a more compressible material than the low-pressure phase. In particular, compression of the C 2/ m phase involves interlayer displacement and twisting of the [CO 3 ] units, and an increase in coordination number of the K + ion. Three more phase transitions, at ~ 28, 34, and 37 GPa occur based on the Raman spectra and powder diffraction data: these give rise to new [CO 3 ] bonding environments within the structure.

36 MATERIALS SCIENCE↗

BinaryCIF and CIFTools—Lightweight, efficient and extensible macromolecular data management

3D macromolecular structural data is growing ever more complex and plentiful in the wake of substantive advances in experimental and computational structure determination methods including macromolecular crystallography, cryo-electron microscopy, and integrative methods. Efficient means of working with 3D macromolecular structural data for archiving, analyses, and visualization are central to facilitating interoperability and reusability in compliance with the FAIR Principles. We address two challenges posed by growth in data size and complexity. First, data size is reduced by bespoke compression techniques. Second, complexity is managed through improved software tooling and fully leveraging available data dictionary schemas. To this end, we introduce BinaryCIF, a serialization of Crystallographic Information File (CIF) format files that maintains full compatibility to related data schemas, such as PDBx/mmCIF, while reducing file sizes by more than a factor of two versus gzip compressed CIF files. Moreover, for the largest structures, BinaryCIF provides even better compression—factor ten and four versus CIF files and gzipped CIF files, respectively. Herein, we describe CIFTools, a set of libraries in Java and TypeScript for generic and typed handling of CIF and BinaryCIF files. Together, BinaryCIF and CIFTools enable lightweight, efficient, and extensible handling of 3D macromolecular structural data.

59 BASIC BIOLOGICAL SCIENCES↗

Study on the High-Pressure Behavior of Goethite up to 32 GPa Using X-Ray Diffraction, Raman, and Electrical Impedance Spectroscopy

Goethite is a major iron-bearing sedimentary mineral on Earth. In this study, we conducted in situ high-pressure x-ray diffraction, Raman, and electrical impedance spectroscopy measurements of goethite using a diamond anvil cell (DAC) at room temperature and high pressures up to 32 GPa. We observed feature changes in both the Raman spectra and electrical resistance at about 5 and 11 GPa. However, the x-ray diffraction patterns show no structural phase transition in the entire pressure range of the study. The derived pressure-volume (P-V) data show a smooth compression curve with no clear evidence of any second-order phase transition. Fitting the volumetric data to the second-order Birch–Murnaghan equation of state yields V 0 = 138.9 ± 0.5 Å 3 and K 0 = 126 ± 5 GPa.

58 GEOSCIENCES↗

Distributed Neural Representation for Reactive In Situ Visualization

Implicit neural representations (INRs) have emerged as a powerful tool for compressing large-scale volume data. This opens up new possibilities for in situ visualization. However, the efficient application of INRs to distributed data remains an underexplored area. Here, in this work, we develop a distributed volumetric neural representation and optimize it for in situ visualization. Our technique eliminates data exchanges between processes, achieving state-of-the-art compression speed, quality and ratios. Our technique also enables the implementation of an efficient strategy for caching large-scale simulation data in high temporal frequencies, further facilitating the use of reactive in situ visualization in a wider range of scientific problems. We integrate this system with the Ascent infrastructure and evaluate its performance and usability using real-world simulations.

Wu, Qi↗

ORNL_AISD_NiPt_108atoms

This dataset describes the nickel-platinum (NiPt) solid solution binary alloy, where the two constituent elements nickel (Ni) and platinum (Pt) are randomly placed on the face centered cubic (FCC) crystal structure, with the lattice constant of 3.840 angstroms. The dataset comprises data for crystal structures with 108 atoms with 1,900 configurations. The data set was generated for concentrations ranging from 0at% of Pt to 100at% of Pt in the NiPt binary system, with increasing the concentration of Pt in the system every 5at%. For each one of the chemical compositions, 100 random configurations were generated, each with a different random seed. Each of the output files contains the mass, type, atomic coordinates, energy per atom, and forces in x, y, and z directions respectively. For each atomic configuration, the output was collected every 150 steps during the minimization stage and every 1000 steps during the replica exchange stage. Large-scale Atomic/Molecular Massively Parallel Simulator (LAMMPS) [1], which is a molecular dynamics code, was used to generate data for NiPt alloy. The simulation used the interatomic potential for NiPt binary system 'MEAM_LAMMPS_KimSeolJi_2017_PtNi__MO_020840179467_001' [3] from the OpenKIM library (Open Knowledgebase of Interatomic Models) [2]. This potential was developed based on the second nearest-neighbor modified embedded-atom method (2NN MEAM). The simulation process begins with the generation of the random NiPt structure and follows with the short minimization and replica exchange simulation. The minimization procedure adjusts atomic coordinates and performs energy minimization, which typically leads to a local potential energy minimum. The method used for the minimization was the conjugate gradient algorithm. A short replica exchange (parallel tempering) simulation involves four replicas (ensembles) of a system and follows the minimization stage. Multiple snapshots of the configuration were collected during the minimization and replica exchange stages. NiPt alloy is interesting due to its magnetic and charge transfer properties [4]. The data is provided in a compressed zipped folders atoms108.zip. The zipped folder contains the data structured in the following way: - Ni_ground_state.cfg --> atomic configuration for the pure nickel - Pt_ground_state.cfg --> atomic configuration for the pure platinum - Pt#_filtered --> folders containing atomic configurations for #at% concentration of platinum. The folder contains 100 atomic configurations, each saved in a subfolder - Each subfolder named config* is associated with a specific atomic configuration. Each of these subfolders contains files with .cfg format, corresponding to outputs for each atomic configuration The total number of atomic configurations contained in atoms108.zip is 66,132. This dataset is an extension to the dataset ORNL_AISD_NiPt [5] that has been previously released with crystal structures of 256 atoms, 864 atoms, and 2,048 atoms, with the same methodology for data collection. References [1] https://www.lammps.org/ [2] https://openkim.org/ [3] https://openkim.org/id/MEAM_LAMMPS_KimSeolJi_2017_PtNi__MO_020840179467_001 [4] El-Gendy, Ahmed A. and Hampel, Silke and Büchner, Bernd and Klingeler, Rüdiger, Tuneable magnetic properties of carbon-shielded NiPt-nanoalloys, RSC Adv., volume 6, issue 57, pages 52427-52433, 2016, The Royal Society of Chemistry, doi:10.1039/C6RA05910D [5] M. Karabin, M. Lupo Pasini, and M. Eisenbach. ORNL_AISD_NiPt. United States: N. p., 2023. Web. doi:10.13139/OLCF/1958172.

36 MATERIALS SCIENCE↗

Development of a Short-Duration Drive Cycle to Represent Long-Term Measured Drive Cycle Data: Evaluation of Truck Efficiency Technologies in Class 8 Tractor Trailers

Quantifying the fuel savings and emissions reductions that can be achieved from truck fuel efficiency technologies for a fleet's specific usage allows the fleet to select a combination of technologies that will yield the greatest operational efficiency and profitability. An accurate characterization of usage for the fleet is critical for such an evaluation; however, short-term measured drive cycle data do not generally reflect overall usage very effectively. This study presents a detailed analysis of vehicle usage in a commercial vehicle fleet and demonstrates the development of a short-duration synthetic drive cycle with measured drive cycle data collected over an extended period of time. The approach matched statistical measures of the vehicle speed with acceleration history and integrated measured grade data to develop a compressed drive cycle that accurately represents total usage. Drive cycle measurements obtained during a full year from six tractor trailers in normal operations in a less-than-truckload carrier were analyzed to develop a synthetic drive cycle. The vehicle mass was also estimated to account for the variation of loads that the fleet experienced. These drive cycle and mass data were analyzed with a tractive energy analysis to quantify the benefits in terms of fuel efficiency and reduced carbon dioxide emissions that can be achieved on Class 8 tractor trailers by using advanced efficiency technologies, either individually or in combination. Although differences exist between Class 8 tractor trailer fleets, this study provides valuable insight into the energy and emissions reduction potential that various technologies can bring in this important trucking application. Finally, the methodology employed for generating the synthetic drive cycle serves as a rigorous approach to develop an accurate usage characterization that can be used to effectively compress large quantities of drive cycle data.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Ta compressibility to 20+ Mbar

Developing techniques for experimentally constraining equation of state (EOS) models for important programmatic materials under extreme conditions is vital for advancing our modeling and predictive capabilities. Tantalum is a frequently used standard material for both calibration and testing, and this report describes our work to both measure Ta compressibility to very high pressures and densities using the Ramp Compression Equation of State platform on the National Ignition Facility (NIF). Using a series of seven shots, increasing in peak pressure with each shot, we have made absolute measurements of the compressibility of Ta along the ramp compression path up to 2.3 TPa. Previous experimental measurements constrained the cold compressibility up to ~400 GPa, and there is a spread in the EOS models above that pressure. To improve communication and collaboration between the experimental team and the EOS development group, these new data, along with other experimental and theoretical constraints, were used to develop a Ta equation of state table, M73000. This report first describes the experimental measurements made at the NIF, and then discusses the construction of the EOS model. The ramp compression data can be found in tabular form in Appendix A. Appendix B contains some additional experimental details. In Appendix C we include some additional details on the EOS modeling. At the end of this document, we have attached a detailed report on the NIF ramp compression platform itself and in the main text referenced specific sections for additional details.

36 MATERIALS SCIENCE↗

A chemical/mineralogical investigation of the behavior of sulfoaluminate binders submitted to accelerated carbonation

The paper addresses the carbonation of CSA based binders from the mechanical, chemical and mineralogical point of view. Three different binders have been investigated, revealing that many hydrated phases can protect ettringite against carbonation. In particular, the presence of AFm phases gives a significant contribution to buffer the pH in alkaline range and to preserve the protective film of steel reinforcement bars. In a carbonated environment AFm phases act as ionic exchangers: carbonate ions replace sulfates in the interlayer and in these conditions the released sulfate ions contribute to the formation of new ettringite, with a beneficial effect on compressive strength performances. Experimental data are compared with models and carbonation mechanisms are described.

36 MATERIALS SCIENCE↗

Drp1 mediates compression-induced programmed necrosis of rat nucleus pulposus cells by promoting mitochondrial translocation of p53 and nuclear translocation of AIF

Compression-induced programmed cell death of nucleus pulposus (NP) cells is an important contributor to intervertebral disc degeneration (IDD). Dynamin-related protein 1 (Drp1), a crucial mitochondrial fission protein, triggers programmed necrosis upon cellular injury. However, limited information is available about the role of Drp1 in compression-induced programmed necrosis of NP cells. In the present study, we found that compression resulted in upregulation and mitochondrial translocation of Drp1. Inhibition of Drp1 by siRNA or mitochondrial division inhibitor 1 (mdivi-1) effectively prevented the programmed necrosis of NP cells treated with compression. Furthermore, Drp1 promoted mitochondrial translocation of p53 and nuclear translocation of apoptosis-inducing factor (AIF) in compression-treated NP cells. Inhibition of p53 mitochondrial translocation by pifithrin-μ (PFT-μ) and silencing of AIF expression by siRNA significantly alleviated compression-induced NP cell programmed necrosis. These data indicates that Drp1 mediates compression-induced programmed necrosis of NP cells by promoting mitochondrial translocation of p53 and nuclear translocation of AIF. - Highlights: • Compression increases the expression and mitochondrial translocation of Drp1 in NP cells. • Inhibition of Drp1 protects NP cells from compression-induced programmed necrosis. • p53 and AIF contribute to Drp1-mediated NP cell programmed necrosis.

60 APPLIED LIFE SCIENCES↗

Parallel membership queries on very large scientific data sets using bitmap indexes

© 2019 John Wiley & Sons, Ltd. Many scientific applications produce very large amounts of data as advances in hardware fuel computing and experimental facilities. Managing and analyzing massive quantities of scientific data is challenging as data are often stored in specific formatted files, such as HDF5 and NetCDF, which do not offer appropriate search capabilities. In this research, we investigated a special class of search capability, called membership query, to identify whether queried elements of a set are members of an attribute. Attributes that naturally have classification values appear frequently in scientific domains such as category and object type as well as in daily life such as zip code and occupation. Because classification attribute values are discrete and require random data access, performing a membership query on a large scientific data set creates challenges. We applied bitmap indexing and parallelization to membership queries to overcome these challenges. Bitmap indexing provides high performance not only for low cardinality attributes but also for high cardinality attributes, such as floating-point variables, electric charge, or momentum in a particle physics data set, due to compression algorithms such as Word-Aligned Hybrid. We conducted experiments, in a highly parallelized environment, on data obtained from a particle accelerator model and a synthetic data set.

Yildiz, Beytullah↗

Refined room-temperature equation of state of Bi up to 260 GPa

At room temperature, bismuth undergoes several structural transitions with increasing pressure before taking on a body-centered cubic (bcc) phase at approximately 8 GPa. The bcc structure is stable to the highest measured pressure and its simplicity, along with its high compressibility and atomic number, makes it an enticing choice as a pressure calibrant. Here, we present three data sets on the compression of bismuth in a diamond anvil cell in a neon pressure medium, up to a maximum pressure of about 260 GPa. The use of a soft pressure medium reduces deviatoric stress when compared to previous work. With an expanded pressure range, a higher point density, and a decreased uniaxial stress component, we are able to provide more reliable equation of state parameters. We also conduct density functional theory electronic-structure calculations that confirm that the bcc phase is energetically favored at high pressure.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

PoroTomo: BRAD and BRDY GPS Station RINEX Files - December 20, 2014

This dataset provides links to daily RINEX files for two GPS stations at Brady's Hot Springs as of December 20, 2014. The data is formatted as compressed GNSS RINEX observation files and is accessible through CSV files containing metadata such as file size, data type, and publication dates. The dataset includes FTP links for downloading the individual RINEX files and covers data collected through 2012. The CSV files serve as a directory for navigating to the correct FTP locations to access the desired data. Users are advised to cross-reference the filenames and station identifiers (BRAD or BRDY) when downloading files. The files were generated by the UNAVCO GSAC Repository, and all data-related timestamps and units are specified within the CSV structure. Links to additional resources, including the original database for direct downloads and a more recent dataset with data as of March 26, 2015, are also provided.

15 GEOTHERMAL ENERGY↗