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At least 505 records · Page 28

GWAS identifies candidate genes controlling adventitious rooting in Populus trichocarpa

Adventitious rooting (AR) is critical to the propagation, breeding, and genetic engineering of trees. The capacity for plants to undergo this process is highly heritable and of a polygenic nature; however, the basis of its genetic variation is largely uncharacterized. To identify genetic regulators of AR, we performed a genome-wide association study (GWAS) using 1148 genotypes of Populus trichocarpa. GWASs are often limited by the abilities of researchers to collect precise phenotype data on a high-throughput scale; to help overcome this limitation, we developed a computer vision system to measure an array of traits related to adventitious root development in poplar, including temporal measures of lateral and basal root length and area. GWAS was performed using multiple methods and significance thresholds to handle non-normal phenotype statistics and to gain statistical power. These analyses yielded a total of 277 unique associations, suggesting that genes that control rooting include regulators of hormone signaling, cell division and structure, reactive oxygen species signaling, and other processes with known roles in root development. Numerous genes with uncharacterized functions and/or cryptic roles were also identified. These candidates provide targets for functional analysis, including physiological and epistatic analyses, to better characterize the complex polygenic regulation of AR.

59 BASIC BIOLOGICAL SCIENCES↗

Daily evapotranspiration changes during heatwaves at 32 NEON sites, 2019-2021

This dataset provides partitioned evapotranspiration (ET, the combined loss of water from soil and plant surfaces) anomalies during heatwave events—soil evaporation (E) and transpiration (T)—for 268 heatwave events across 32 National Ecological Observatory Network (NEON) flux sites in the contiguous United States from 2019–2021. Using an ensemble of four high-frequency turbulence methods (Flux-variance Similarity, Conditional Eddy Covariance [CEC], CEC with Water-Use Efficiency, and Conditional Eddy Accumulation; see Zahn and Bou-Zeid 2024), half-hourly transpiration-to-evapotranspiration (T/ET) ratios were derived from 20 hertz (Hz, cycles per second) eddy covariance measurements of carbon dioxide (CO₂) and water vapor (H₂O) concentrations. The dataset spans six vegetation types including evergreen and deciduous forests, grasslands, cultivated crops, shrublands, and emergent herbaceous wetlands. Data Package Contents: The dataset includes a single CSV (comma-separated values) file containing daily anomalies (deviations from baseline conditions) for transpiration (Delta_T), evaporation (Delta_E), total evapotranspiration (Delta_ET), and T/ET ratio (Delta_T_ET) during each day of identified heatwave events. The file also includes site codes, dates, heatwave event identifiers, and day-of-heatwave indicators. The CSV file can be opened with spreadsheet software (Microsoft Excel, Google Sheets) or programming environments (Python, R, MATLAB). This resource enables researchers to investigate ecosystem-specific responses to thermal extremes, validate land surface model partitioning of ET fluxes, and examine feedbacks between water cycling and surface energy balance during heatwaves. The dataset is particularly valuable for studies linking vegetation hydraulic strategies to climate resilience, as it captures the divergent responses of shallow-rooted versus deep-rooted ecosystems. Potential applications include improving drought early warning systems, informing irrigation management strategies, and advancing our mechanistic understanding of land-atmosphere interactions under extreme heat conditions.

Day of Heatwave↗

A movable-mass attitude stabilization system for cable-connected artificial-g space stations

The development of an active, momentum-exchange system to be used for attitude stabilization of a class of cable-connected artificial-g space stations is studied. A system which employs a single movable control mass is examined for the control of a space station which has the physical appearance of two cylinders connected axially by cables. The dynamic model for the space station includes its aggregate rigid body rotation and relative torsional rotation between the bodies. A zero torsional stiffness design (one cable) and a maximum torsional stiffness design (eight cables) are examined in various stages of deployment, for selected spin velocities ranging from 4 rpm upwards. A linear, time-invariant, feed-back control system is employed, with gains calculated via a root-specification procedure. The movable mass controller provides critical wobble-damping capability for the crew quarters for all configurations and spin velocity.

Childs, D. W.↗

Systems for measuring response statistics of gigahertz bandwidth photomultipliers

New systems have been developed for measuring the average impulse response, the pulse-height spectrum, the transit-time statistics as a function of signal level, and the dark-count spectrum of gigahertz bandwidth photomultipliers. Measurements showed that the 0.53 microns pulse used as an optical test source had a 30 picoseconds and less than 70 ps pulse width. Calibration data showed the system resolution to be less than 20 ps for root mean square transit-time measurements. Test data for a static crossed-field photomultiplier showed 2-photoelectron resolution and less than 30-ps time jitter over the 1- to 100-photoelectron range.

Abshire, J. B.↗

The experimental results of a self tuning adaptive controller using online frequency identification

A fourth-order laboratory dynamic system featuring very low structural damping and a noncolocated actuator-sensor pair has been used to test a novel real-time adaptive controller, implemented in a minicomputer, which consists of a state estimator, a set of state feedback gains, and a frequency-locked loop for real-time parameter identification. The adaptation algorithm employed can correct controller error and stabilize the system for more than 50 percent variation in the plant's natural frequency, compared with a 10 percent stability margin in frequency variation for a fixed gain controller having the same performance as the nominal plant condition. The very rapid convergence achievable by this adaptive system is demonstrated experimentally, and proven with simple, root-locus methods.

Chiang, W.-W.↗

Strain accumulation in quasicrystalline solids

The relaxation of two-dimensional quasicrystalline elastic networks when their constituent bonds are perturbed homogeneously is studied. Whereas ideal, quasi-periodic networks are stable against such perturbations, significant accumulations of strain in a class of disordered networks generated by a growth process are found. The grown networks are characterized by root mean square phason fluctuations which grow linearly with system size. The strain accumulation observed in these networks also grows linearly with system size. Finally, dependence of strain accumulation on cooling rate is found.

Nori, Franco↗

Stability of Intershaft Squeeze Film Dampers

Intershaft squeeze film dampers were investigated for damping of dual rotor aircraft jet engines. It was thought that the intershaft damper would enhance the stability of the rotor-bearing system. Unfortunately, it was determined that the intershaft squeeze film damper was unstable above the engine's first critical speed. Here, a stability analysis of rotors incorporating intershaft squeeze film dampers is discussed. A rotor model consisting of two Jeffcott rotors with two intershaft squeeze film dampers was investigated. Examining the system characteristic equation for the conditions at which the roots indicate an ever-growing unstable motion results in the stability conditions. The cause of the instability is identified as the rotation of the oil in the damper clearance. Several proposed configurations of intershaft squeeze film dampers are discussed, and it is shown that the intershaft dampers are stable supercritically only with a configuration in which the oil film does not rotate.

El-Shafei, A.↗

Application of the GEM-T2 gravity field to altimetric satellite orbit computation

As part of a continuing effort to provide improved orbits for use with existing altimeter data, we have recomputed ephemerides for both the Seasat and Geosat Exact Repeat altimeter missions. The orbits were computed in a consistent fashion, using the Goddard Earth Model T2 (GEM-T2) gravity field along with available ground-based tracking data. Such an approach allows direct comparisons of sea level between the two altimeter systems. Evaluation of the resulting ephemerides indicates that root-mean-square accuracies of 30-50 cm have been achieved for the radial component of the orbits for both satellites. An exception occurs for the last year of the Geosat Exact Repeat Mission, when the rms radial orbit accuracy degrades to the 1-m level at times owing to the inability to adequately model the drag force arising from the increased solar activity.

Haines, Bruce J.↗

Precision Segmented Reflectors (PSR)

Current Precision Segmented Reflectors (PSR) technology development is intended for LDR-like applications: (1) Large segmented reflector systems; (2) Lightweight composite panels at 3 micron root-mean-square (RMS); (3) Precision lightweight structure at 500 microns; (4) Active figure control at 1 micron RMS accuracy; and (5) 5 micron RMS overall surface accuracy. Development of PSR technologies to date has demonstrated the potential of: (1) Lightweight composite panels at 0.1 micron RMS via polishing and re-finishing; (2) Shape control of composite panels by imbedded actuators; (3) Precision lightweight structure at 100 microns or better; and (4) Smart structure strut that can suppress vibrations and change its length.

Lin, Richard Y.↗

Development of a Self-calibrating Dissolved Oxygen Microsensor Array for the Monitoring and Control of Plant Growth in a Space Environment

Plant experiments in space will require active nutrient delivery concepts in which water and nutrients are replenished on a continuous basis for long-term growth. The goal of this study is to develop a novel microsensor array to provide information on the dissolved oxygen environment in the plant root zone for the optimum control of plant cultivation systems in the space environment. Control of water and oxygen is limited by the current state-of-the-art in sensor technology. Two capabilities of the new microsensor array were tested. First, a novel in situ self-diagnosis/self-calibration capability for the microsensor was explored by dynamically controlling the oxygen microenvironment in close proximity to an amperometric dissolved oxygen microsensors. A pair of integrated electrochemical actuator electrodes provided the microenvironments based on water electrolysis. Miniaturized thin film dissolved oxygen microsensors on a flexible polyimide (Kapton(Registered Trademark)? substrate were fabricated and their performances were tested. Secondly, measurements of dissolved oxygen in two representative plant growth systems were made, which had not been performed previously due to lack of proper sensing technology. The responses of the oxygen microsensor array on a flexible polymer substrate properly reflected the oxygen contents on the surface of a porous tube nutrient delivery system and within a particulate substrate system. Additionally, we demonstrated the feasibility of using a 4-point thin film microprobe for water contents measurements for both plant growth systems. mechanical flexibility, and self-diagnosis. The proposed technology is anticipated to provide a reliable sensor feedback plant growth nutrient delivery systems in both terrestrial environment and the microgravity environment during long term space missions. The unique features of the sensor include small size and volume, multiple-point sensing,

Kim, Chang-Soo↗

Automated Sequence Processor: Something Old, Something New

High productivity required for operations teams to meet schedules Risk must be minimized. Scripting used to automate processes. Scripts perform essential operations functions. Automated Sequence Processor (ASP) was a grass-roots task built to automate the command uplink process System engineering task for ASP revitalization organized. ASP is a set of approximately 200 scripts written in Perl, C Shell, AWK and other scripting languages.. ASP processes/checks/packages non-interactive commands automatically.. Non-interactive commands are guaranteed to be safe and have been checked by hardware or software simulators.. ASP checks that commands are non-interactive.. ASP processes the commands through a command. simulator and then packages them if there are no errors.. ASP must be active 24 hours/day, 7 days/week..

Automated↗

Lessons Learned from Flight Observations of the GOES-R Magnetometer

The Geostationary Operational Environmental Satellite (GOES)-16 observatory was launched on 19 November 2016. During daily on-orbit operations, shadowing of the inboard magnetometer sensor unit occurs due to spacecraft geometry and solar angle. Throughout the shadowing periods of the inboard magnetometer, anomalous excursions of 20 nanotesla (nT) are observed. In addition to the excursions during shadow events, the measurement difference between the inboard and outboard magnetometer varies over the day, indicating erroneous measurements by one or both magnetometers. In addition, based on the deployment rotations, the zero offsets of the X and Y axes were found to be significantly different, ~30nT, from ground calibration data. Because of these observations, an extensive root cause investigation was undertaken to correct the magnetometer system for the next spacecraft in the GOES-R series. This paper documents the efforts of that activity and the lessons learned as a result of the investigation.

Schnurr, R.↗

Lessons Learned from Flight Observations of the GOES-R Magnetometer

The Geostationary Operational Environmental Satellite (GOES)-16 observatory was launched on 19 November 2016. During daily on-orbit operations, shadowing of the inboard magnetometer sensor unit occurs due to spacecraft geometry and solar angle. Throughout the shadowing periods of the inboard magnetometer, anomalous excursions of 20 nanotesla (nT) are observed. In addition to the excursions during shadow events, the measurement difference between the inboard and outboard magnetometer varies over the day, indicating erroneous measurements by one or both magnetometers. In addition, based on the deployment rotations, the zero offsets of the X and Y axes were found to be significantly different, ~30nT, from ground calibration data. Because of these observations, an extensive root cause investigation was undertaken to correct the magnetometer system for the next spacecraft in the GOES-R series. This paper documents the efforts of that activity and the lessons learned as a result of the investigation.

GOES-R↗

Beyond Binary: Automated PLC Memory Forensics through RGB Image Analysis and Deep Learning

The introduction of Industry 4.0 and the evolution of industrial control systems (ICS) to adopt Internet-based technologies enhanced productivity, but have inadvertently increased their vulnerability to cyber-based malicious attacks. When an ICS system is compromised, security analysts need to identify the root cause quickly to start the recovery process and develop mitigation strategies to safeguard against future instances. Memory forensics is critical in the analysis process to ascertain what occurred. To date, approaches to analyze the persistent memory in ICS devices are limited, and almost nonexistent for volatile memory. This paper proposes an automated methodology, COMA, for PLC memory dump analysis using computer vision and deep learning techniques. Specifically, COMA converts the sequences of bytes in a PLC memory dump to RGB pixels and creates a deep learning model that learns the underlying patterns and features of pre-labeled forensic artifacts in images and segments them into distinct regions. COMA then uses the trained model to automatically segment new memory images and extract forensic artifacts. We evaluate COMA on a Schneider Electric Modicon M221 PLC involving two cyber-based attack scenarios: (i) code injection and (ii) code modification. The empirical results show that COMA can successfully detect attack artifacts in memory dumps in both scenarios.

Asmar Awad, Rima↗

Controlled environment crop production - Hydroponic vs. lunar regolith

The potential of controlled environment crop production in a lunar colony is discussed. Findings on the effects of optimal root-zone and aerial environments derived as part of the NASA CELSS project at Utah State are presented. The concept of growing wheat in optimal environment is discussed. It is suggested that genetic engineering might produce the ideal wheat cultivar for CELSS (about 100 mm in height with fewer leaves). The Utah State University hydroponic system is outlined and diagrams of the system and plant container construction are provided. Ratio of plant mass to solution mass, minimum root-zone volume, maintenance, and pH control are discussed. A comparison of liquid hydrophonic systems and lunar regoliths as substrates for plant growth is provided. The physiological processes that are affected by the root-zone environment are discussed including carbon partitioning, nutrient availability, nutrient absorption zones, root-zone oxygen, plant water potential, root-produced hormones, and rhizosphere pH control.

Bugbee, Bruce G.↗

A Prognostic Launch Vehicle Probability of Failure Assessment Methodology for Conceptual Systems Predicated on Human Causal Factors

Create an improved method to calculate reliability of a conceptual launch vehicle system prior to fabrication by using historic data of actual root causes of failures. While failures have unique "proximate causes", there are typically a finite amount of common "root causes". Heretofore launch vehicle reliability evaluation typically hardware-centric statistical analyses, while most root causes of failures are been shown to be human-centric. A method based on human-centric root causes can be used to quantify reliability assessments and focus proposed actions to mitigate problems. Existing methods have been optimistic in their projections of launch vehicle reliability compared to actuals. Hypothesis: reliability of a conceptual launch vehicle can be more accurately evaluated based on a rational, probabilistic approach using past failure assessment teams' findings predicated on human-centric causes."Human Reliability Analysis Methods Selection Guidance for NASA"Chandler F.T., et al., NASA HQ/OSMA study group, July 2006. Outside HRA experts from academia, other federal labs, and the private sector. 50 system reliability methods considered, fourteen selected for further study, four finally selected as best suited for human spaceflight. Probabilistic Risk Analysis (PRA) + Human Reliability Analysis (HRA) enabled incorporating effects and probabilities of human errors. While four down-selected methods deemed appropriate for failure assessment, it did not appear that these methods could be concisely applied to perform major system-wide assessment of probability of failure of a conceptual design without becoming unwieldy."Engineering a Safer World", Detailed, comprehensive study external to NASA Leveson N. G., MIT, 2011.Systems-Theoretic Accident Model and Processes (STAMP). All-encompassing accident model based on systems theory analyzed accidents after they occurred and created approaches to prevent occurrence in developing systems not focused on failure prevention per se, but rather reducing hazards by influencing human behavior through use of constraints, hierarchical control structures, and process models to improve system safetySystem Theoretic Process Analysis (STPA) addresses predictive part of problem (a "hazard analysis"). Includes all causal factors identified in STAMP: "...design errors, software flaws, component interaction accidents, cognitively complex human decision-making errors, and social organizational and management factors contributing to accidents" can guide design process rather than require it to exist before-hand did not appear capable of concise application for system-wide assessment of probability of failure of a conceptual design without becoming unwieldy.

Williams, Craig H.↗

Lumping and splitting: Toward a classification of mineral natural kinds

How does one best subdivide nature into kinds? All classification systems require rules for lumping similar objects into the same category, while splitting differing objects into separate categories. Mineralogical classification systems are no exception. Our work in placing mineral species within their evolutionary contexts necessitates this lumping and splitting because we classify “mineral natural kinds” based on unique combinations of formational environments and continuous temperature-pressure-composition phase space. Consequently, we lump two minerals into a single natural kind only if they: (1) are part of a continuous solid solution; (2) are isostructural or members of a homologous series; and (3) form by the same process. A systematic survey based on these criteria suggests that 2310 (~41%) of 5659 IMA-approved mineral species can be lumped with one or more other mineral species, corresponding to 667 “root mineral kinds,” of which 353 lump pairs of mineral species, while 129 lump three species. Eight mineral groups, including cancrinite, eudialyte, hornblende, jahnsite, labuntsovite, satorite, tetradymite, and tourmaline, are represented by 20 or more lumped IMA-approved mineral species. A list of 5659 IMA-approved mineral species corresponds to 4016 root mineral kinds according to these lumping criteria. The evolutionary system of mineral classification assigns an IMA-approved mineral species to two or more mineral natural kinds under either of two splitting criteria: (1) if it forms in two or more distinct paragenetic environments, or (2) if cluster analysis of the attributes of numerous specimens reveals more than one discrete combination of chemical and physical attributes. A total of 2310 IMA-approved species are known to form by two or more paragenetic processes and thus correspond to multiple mineral natural kinds; however, adequate data resources are not yet in hand to perform cluster analysis on more than a handful of mineral species. We find that 1623 IMA-approved species (~29%) correspond exactly to mineral natural kinds; i.e., they are known from only one paragenetic environment and are not lumped with another species in our evolutionary classification. Greater complexity is associated with 587 IMA-approved species that are both lumped with one or more other species and occur in two or more paragenetic environments. In these instances, identification of mineral natural kinds may involve both lumping and splitting of the corresponding IMA-approved species on the basis of multiple criteria. Based on the numbers of root mineral kinds, their known varied modes of formation, and predictions of minerals that occur on Earth but are as yet undiscovered and described, we estimate that Earth holds more than 10000 mineral natural kinds.

Philosophy of mineralogy↗