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At least 505 records · Page 28

Sequential Kalman tuning of the t -preconditioned Crank-Nicolson algorithm: efficient, adaptive and gradient-free inference for Bayesian inverse problems

Ensemble Kalman Inversion (EKI) has been proposed as an efficient method for the approximate solution of Bayesian inverse problems with expensive forward models. However, when applied to the Bayesian inverse problem EKI is only exact in the regime of Gaussian target measures and linear forward models. Here, in this work we propose embedding EKI and Flow Annealed Kalman Inversion, its normalizing flow (NF) preconditioned variant, within a Bayesian annealing scheme as part of an adaptive implementation of the t-preconditioned Crank-Nicolson (tpCN) sampler. The tpCN sampler differs from standard pCN in that its proposal is reversible with respect to the multivariate t-distribution. The more flexible tail behaviour allows for better adaptation to sampling from non-Gaussian targets. Within our Sequential Kalman Tuning (SKT) adaptation scheme, EKI is used to initialize and precondition the tpCN sampler for each annealed target. The subsequent tpCN iterations ensure particles are correctly distributed according to each annealed target, avoiding the accumulation of errors that would otherwise impact EKI. We demonstrate the performance of SKT for tpCN on three challenging numerical benchmarks, showing significant improvements in the rate of convergence compared to adaptation within standard SMC with importance weighted resampling at each temperature level, and compared to similar adaptive implementations of standard pCN. The SKT scheme applied to tpCN offers an efficient, practical solution for solving the Bayesian inverse problem when gradients of the forward model are not available. Code implementing the SKT schemes for tpCN is available at https://github.com/RichardGrumitt/KalmanMC.

97 MATHEMATICS AND COMPUTING↗

The Gutzwiller conjugate gradient minimization method for correlated electron systems

In this report we review our recent work on the Gutzwiller conjugate gradient minimization method, an ab initio approach developed for correlated electron systems. The complete formalism has been outlined that allows for a systematic understanding of the method, followed by a discussion of benchmark studies of dimers, one- and two-dimensional single-band Hubbard models. In the end, we present some preliminary results of multi-band Hubbard models and large-basis calculations of F 2 to illustrate our efforts to further reduce the computational complexity.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Ion-temperature-gradient stability near the magnetic axis of quasisymmetric stellarators

Abstract The stability of the ion-temperature gradient mode in quasisymmetric stellarators is assessed. This is performed using a set of analytical estimates together with linear gyrokinetic simulations. The peak growth rates, their corresponding real frequencies and wave-vectors are identified. A comparison is made between a first-order near-axis expansion model and eleven realistic designs obtained using numerical optimization methods. It is found that while the near-axis expansion is able to replicate the growth rates, real frequencies and perpendicular wave-vector at the inner core (both using simplified dispersion relations and first-principle gyrokinetic simulations), it leads to an overestimation of the growth rate at larger radii. An approximate analytic solution of the ITG dispersion relation for the non-resonant limit suggests growth rates could be systematically higher in quasi-axisymmetric (QA) configurations compared to quasi-helically (QH) symmetric ones. However except for very close to the axis, linear gyrokinetic simulations do not show systematic differences between QA and QH configurations.

Physics↗

Global gyro-kinetic ion temperature gradient and trapped electron mode turbulence modelling in X -point geometry in negative and positive triangularity

Comparative modelling of ion temperature gradient (ITG)/trapped electron mode (TEM) turbulence in negative (NT) and positive (PT) triangularity plasma shapes was done using the nonlinear global full-f gyrokinetic particle code JOREK-GK in the realistic X-point tokamak geometry including the Scrape Off Layer (SOL) for TCV and DIII-D parameters. A comparison of JOREK-GK code with the gyrokinetic codes GS2 and GENE was done using NT/PT triangularity TCV L-modes parameters showing good agreement between codes in linear growth rates and clear beneficial effect of NT as compared to PT. Global non-linear modelling of the ITG/TEM saturated turbulence for realistic DIII-D NT pulses was done and compared with numerically constructed PT equilibrium with the same plasma profiles. Existence of longer correlation length of density fluctuations in PT compared to NT was demonstrated. Stronger and more sheared zonal flows are generated via Reynolds stress in NT compared to PT. These factors are stabilizing for TEM/ITG turbulence in NT and lead to smaller heat fluxes and heat conductivities in NT compared to PT configuration. Weak dependence of plasma confinement on collisionality and plasma rotation was found in modelling of DIII-D NT shots similar to the experiment. The confinement scaling with normalized ion gyro-radius ρ* was estimated both for NT and PT. Bohm-like scaling was obtained in both configurations, however with better confinement for NT compared to PT which could be favourable factor for reactor size machines.

ITG↗

Effects of midplane density gradient in the propagation of high-harmonic fast waves considering high temperature anisotropy in the scrape-off layer of NSTX-U

High-Harmonic Fast Wave (HHFW) heating experiments in NSTX have shown that up to 60% of the injected power can be lost in the Scrape-Off Layer (SOL) when the density is above the fast wave cutoff density in front of the antenna, for which the fast wave is able to propagate into the plasma. This work models HHFW propagation in the SOL plasmas of NSTX-U using a 2D divertor SOL profile derived from the pressure assumption and the finite element temperature solution, which accounts for the high anisotropy of heat conduction in a 2D axisymmetric geometry. In this work, the two-dimensional axisymmetric SOL temperature profile is first evaluated by solving the steady-state non-linear heat conduction equation, in which thermal conductivity depends on temperature, using a finite element approach in the Petra-M workbench. A 2D density profile is then obtained from a prescribed density profile at the outer midplane assuming pressure is uniform along a flux tube in the SOL. This approach results in density and temperature profiles in which the strong asymmetric nature of heat conduction between the parallel and perpendicular background magnetic field is successfully captured. Furthermore, this work focuses on investigating the effect of the SOL plasma density profile on parasitic HHFW propagation in the SOL. The simulation results show that the radial gradient of the density profile affects the wavefield propagation in the SOL. As the density profile broadens, the wavefield intensity and its poloidal extent are reduced in the SOL, and the core coupling increases. Similarly, as shown by collisional power deposition, a proxy for power absorption, the fraction of power deposited in the SOL decreases with a broadening profile.

HHFW↗

Examination of stiff ion temperature gradient mode physics in simulations of DIII-D H-mode transport

This paper presents comparisons of predictions from two models of turbulent transport in tokamaks. The focus is on assessing how close a reduced but significantly less computationally demanding model (TGLF) does in matching the more detailed model (CGYRO) in predicting scalings with driving gradient ("stiffness"). The impacts of other physics mechanisms such as flow shear, fast ions, and electromagnetic fluctuations on these predictions is also studied. Overall, while there are clear differences in the scaling, these do not appear to significantly impact the fidelity of the reduced model in prediction the experimental conditions studied relative to the more advanced model.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Effects of zonal flows on ion temperature gradient instability in the scrape-off layer of a field-reversed configuration

Gyrokinetic simulations of long wavelength ion temperature gradient (ITG) turbulence in the scrape-off layer (SOL) of a field-reversed configuration (FRC) find that zonal flows are nonlinearly generated and are the dominant mechanism for the nonlinear saturation of the ITG instability. After the ITG saturation, zonal flows remain undamped and gradually suppress the turbulent transport to a very low level. In the simulations with collisions, collisional damping gradually reduces zonal flow amplitude to a lower level, which allows finite ITG turbulence intensity and ion heat transport in the SOL. The steady state turbulence intensity and ion heat transport are found to be proportional to the collision frequency. Furthermore, this favorable scaling suggests that minimizing collisions (e.g. increasing temperature, reducing impurity content, etc) and preserving toroidal symmetry could improve plasma confinement in the FRC.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Global gyrokinetic simulations of the impact of magnetic island on ion temperature gradient driven turbulence

The effect of island width on the multi-scale interactions between magnetic island (MI) and ion temperature gradient (ITG) turbulence has been investigated based on the global gyrokinetic approach. It is found that the coupling between the island and turbulence is enhanced when the MI width (w) becomes larger. A vortex flow that is highly sensitive to the width of the MI can be triggered, ultimately resulting in a potent E × B shear flow and a consequent reduction in turbulent transport. The shearing rate induced by the vortex flow is minimum at the O-point while it is maximum at both of the two reconnection points of the island, i.e. the X-points, regardless of the island width. There exists a nonmonotonic relationship between zonal flow (ZF) amplitude and island width, showing that the ZF is partially suppressed by medium-sized MIs whereas enhanced in the case of large island. A larger MI can tremendously damage the ITG mode structure, resulting in higher turbulent transport at the X-point whereas a lower one at the O-point, respectively. Such phenomenon will be less distinct at very small island widths below w/a ~ 8% ≈ 12ρ i (a is the minor radius and ρ i the ion gyroradius), where it shows that turbulence near the X-point is hardly affected although it is still suppressed inside the island. Furthermore, the influence of different island sizes on turbulence transport level is also discussed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Photon classification with Gradient Boosted Trees at CLAS12

Dihadron semi-inclusive deep inelastic scattering (SIDIS) of 10.6 GeV longitudinally polarized electrons off the proton has been measured using the CLAS12 detector at Jefferson Lab. Two separate channels, π + π 0 and π - π 0 , were analyzed, requiring the reconstruction of diphoton pairs. Here, in this analysis, we addressed the problem of false neutral particles being reconstructed by CLAS12's event builder, polluting the otherwise physical combinatorial background underneath the π 0 peak. A photon classifier using a Gradient Boosted Trees (GBTs) architecture was trained with Monte Carlo simulations to reduce the amount of background π 0 's. We show that the nearest-neighbor features learned by the model lead to a substantial increase in signal vs. background discrimination compared to previous CLAS12 π^0 analyses. The machine learning approach recovers several times more dihadron statistics for the dataset.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Development of a cryocooler conduction-cooled 650 MHz SRF cavity operating at ~10 MV/m cw accelerating gradient

SRF cavities for particle acceleration are conventionally operated immersed in a bath of liquid helium at 4.2 K and below. Although this cooling configuration is practically and economically viable for large scientific accelerator installations, it may not be so for smaller accelerators intended for industrial applications such as the treatment of wastewater, sludge, flue gases, etc. In this paper, we describe a procedure to operate SRF cavities without liquid helium that can be used to construct electron-beam sources for industrial applications of electron irradiation (1-10 MeV electron energy). In this procedure, an elliptical single-cell 650 MHz niobium-tin coated niobium cavity is coupled to a closed-cycle 4.2 K cryocooler using high purity aluminum thermal links. The cryocooler conductively extracts heat (RF dissipation) from the cavity without requiring liquid helium around the cavity. We present construction details of this cryocooler conduction-cooling technique and systematic experiments that have demonstrated ~10 MV/m cw gradient on the cavity. By straightforward scaling up the cavity length and number of cryocoolers, the technique will provide the complete range of 1-10 MeV electron energy for industrial applications.

43 PARTICLE ACCELERATORS↗

Linear gyrokinetic simulations of reversed shear Alfvén eigenmodes and ion temperature gradient modes in DIII-D tokamak

Abstract Global linear gyrokinetic simulations using realistic DIII-D tokamak geometry and plasma profiles find co-existence of unstable reversed shear Alfvén eigenmodes (RSAE) with low toroidal mode number n and electromagnetic ion temperature gradient (ITG) instabilities with higher toroidal mode number n . For intermediate n = [10, 12], RSAE and ITG co-exist and overlap weakly in the radial domain with similar growth rates but different real frequencies. Both RSAE and ITG growth rates decrease less than 5% when compressible magnetic perturbations are neglected in the simulations. The ITG growth rates increase less than 7% when fast ions are not included in the simulations. Finally, the effects of trapped electrons on the RSAE are negligible.

Physics↗

Plug & play directed evolution of proteins with gradient-based discrete MCMC

Abstract A long-standing goal of machine-learning-based protein engineering is to accelerate the discovery of novel mutations that improve the function of a known protein. We introduce a sampling framework for evolving proteins in silico that supports mixing and matching a variety of unsupervised models, such as protein language models, and supervised models that predict protein function from sequence. By composing these models, we aim to improve our ability to evaluate unseen mutations and constrain search to regions of sequence space likely to contain functional proteins. Our framework achieves this without any model fine-tuning or re-training by constructing a product of experts distribution directly in discrete protein space. Instead of resorting to brute force search or random sampling, which is typical of classic directed evolution, we introduce a fast Markov chain Monte Carlo sampler that uses gradients to propose promising mutations. We conduct in silico directed evolution experiments on wide fitness landscapes and across a range of different pre-trained unsupervised models, including a 650 M parameter protein language model. Our results demonstrate an ability to efficiently discover variants with high evolutionary likelihood as well as estimated activity multiple mutations away from a wild type protein, suggesting our sampler provides a practical and effective new paradigm for machine-learning-based protein engineering.

59 BASIC BIOLOGICAL SCIENCES↗

Harnessing the power of gradient-based simulations for multi-objective optimization in particle accelerators

Abstract Particle accelerator operation requires simultaneous optimization of multiple objectives. Multi-objective optimization (MOO) is particularly challenging due to trade-offs between the objectives. Evolutionary algorithms, such as genetic algorithms (GAs), have been leveraged for many optimization problems, however, they do not apply to complex control problems by design. This paper demonstrates the power of differentiability for solving MOO problems in particle accelerators using a deep differentiable reinforcement learning (DDRL) algorithm. We compare the DDRL algorithm with model-free reinforcement learning (MFRL), GA, and Bayesian optimization (BO) for simultaneous optimization of heat load and trip rates in the continuous electron beam accelerator facility. The underlying problem enforces strict constraints on both individual states and actions as well as cumulative (global) constraints on energy requirements of the beam. Using historical accelerator data, we develop a physics-based surrogate model which is differentiable and allows for back-propagation of gradients. The results are evaluated in the form of a Pareto-front with two objectives. We show that the DDRL outperforms MFRL, BO, and GA on high dimensional problems.

43 PARTICLE ACCELERATORS↗

Implementation of Stochastic Gradient Descent in an Automated Glow Peak Identification Software for Multiple Thermoluminescent Dosimeter Types

A glow-curve analysis code was previously developed in C++ to analyze thermoluminescent dosimeter glow curves using automated peak detection while applying a first-order kinetics model. A newer version of this code was implemented to improve the automated peak detection and curve fitting models. The Stochastic Gradient Descent Algorithm was introduced to replace the prior approach of taking first and second-order derivatives for peak detection. Additionally, early stopping mechanisms were invoked to improve the previously used Levenberg-Marquardt Algorithm employed for curve fitting. The two software versions were compared through glow curve analysis of different thermoluminescent dosimeter materials and calculation of the corresponding figures of merit. Altogether improvements were shown, namely an increase in the number of peaks detected and a reduction of the mean figure of merit by approximately 46%.

137Cs↗

Accessing the gluon momentum fraction of nucleons through the gradient flow

We calculate the gluon momentum fraction of the nucleon using lattice QCD, with a nonperturbative renormalization technique based on the gradient flow. The gluon momentum fraction is determined on a single Wilson-clover ensemble using 𝑁 𝑓 =2 +1 flavors with pion mass 358 MeV and lattice spacing 0.094 fm. We employ the variational method to reduce excited-state contamination and apply the distillation framework to ensure a large operator basis. To reduce systematic uncertainties, we apply Bayesian model averaging to all fit procedures. We apply matching coefficients to the flow-time dependent lattice results to recover the gluon momentum fraction in the $\overline{MS}$-scheme at 2 GeV. Our final result is ⟨𝑥⟩ 𝑔 ⁢(𝜇 =2 GeV) =0.482⁢(35), where we quote only statistical uncertainties.

Lattice QCD↗

Renormalized quark masses using gradient flow

We propose a new and simple method for determining the renormalized quark masses from lattice simulations. Renormalized quark masses are an important input to many phenomenological applications, including searching and modeling physics beyond the Standard Model. The nonperturbative renormalization is performed using gradient flow combined with the short-flow-time expansion that is improved by renormalization group (RG) running to match to the $\overline{MS}$ scheme. Implementing the RG running perturbatively, we demonstrate this method works reliably at least up to the charm-quark mass and exhibits an easily attainable “windowing condition.” Using RBC/UKQCD’s (2+1)-flavor Shamir domain-wall fermion ensembles with Iwasaki gauge action, we find 𝑚 $\overline{MS}$ 𝑠⁡ (𝜇 = 2 GeV) = 89⁢(3) MeV and 𝑚 $\overline{MS}$ 𝑐 ⁡(𝜇 = 3 GeV) = 972⁢(16) MeV. These results predict the scale-independent ratio 𝑚 𝑐 /𝑚 𝑠 = 12.1⁢(4). Generalization to other observables is possible, providing an efficient approach to determine nonperturbatively renormalized fermionic observables like form factors or bag parameters from lattice simulations.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Accelerating resonant spectroscopy simulations using multishifted biconjugate gradient

Resonant spectroscopies, which involve intermediate states with finite lifetimes, provide important insights into collective excitations in quantum materials that are otherwise inaccessible. However, theoretical understanding in this area is often limited by the numerical challenges of solving Kramers-Heisenberg-type response functions for large-scale systems. To address this, we introduce a multishifted biconjugate gradient algorithm that exploits the shared structure of Krylov subspaces across spectra with varying incident energies, effectively reducing the computational complexity to that of linear spectroscopies. Both mathematical proofs and numerical benchmarks confirm that this algorithm substantially accelerates spectral simulations, achieving constant complexity independent of the number of incident energies, while ensuring accuracy and stability. This development provides a scalable, versatile framework for simulating advanced spectroscopies in quantum materials.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Tune compensation in nearly scaling fixed field alternating gradient accelerators

In this paper, we investigate the stability of the particle trajectories in fixed field alternating gradient accelerators (FFAs) in the presence of field errors. The emphasis is on the scaling radial sector FFA type: A collaboration work is ongoing in view of better understanding the properties of the 150 MeV scaling FFA at Kyoto University Institute for Integrated Radiation and Nuclear Science in Japan and progress toward high-intensity operation. Analysis of certain types of field imperfections revealed some interesting features that required the development of an analytical model based on the scalloping angle of the orbits. This helped explain some of the experimental results as well as generalize the concept of a scaling FFA to a nonscaling one for which the tune variations obey a well-defined law. Based on this, a compensation scheme of tune variations in imperfect scaling FFAs is presented. This is the cornerstone of a novel concept of a fixed tune FFA in which the scaling is not achieved at every azimuthal position of the ring but rather in an average sense.

43 PARTICLE ACCELERATORS↗