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At least 505 records · Page 28

Snapshot multifocal light field microscopy

Light field microscopy (LFM) is an emerging technology for high-speed wide-field 3D imaging by capturing 4D light field of 3D volumes. However, its 3D imaging capability comes at a cost of lateral resolution. In addition, the lateral resolution is not uniform across depth in the light field dconvolution reconstructions. To address these problems, here, we propose a snapshot multifocal light field microscopy (MFLFM) imaging method. The underlying concept of the MFLFM is to collect multiple focal shifted light fields simultaneously. We show that by focal stacking those focal shifted light fields, the depth-of-field (DOF) of the LFM can be further improved but without sacrificing the lateral resolution. Also, if all differently focused light fields are utilized together in the deconvolution, the MFLFM could achieve a high and uniform lateral resolution within a larger DOF. We present a house-built MFLFM system by placing a diffractive optical element at the Fourier plane of a conventional LFM. The optical performance of the MFLFM are analyzed and given. Both simulations and proof-of-principle experimental results are provided to demonstrate the effectiveness and benefits of the MFLFM. We believe that the proposed snapshot MFLFM has potential to enable high-speed and high resolution 3D imaging applications.

He, Kuan↗

An approach for broad molecular imaging of the root-soil interface via indirect matrix-assisted laser desorption/ionization mass spectrometry

Understanding of rhizospheric processes is limited by the need for imaging complex molecular transformations at relevant spatial scales within the root soil continuum. In this work, we demonstrate a method to enable this analysis by first extracting organic compounds from the rhizosphere onto a PVDF membrane while maintaining their 2D distribution. We then image the distribution of chemical compounds using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS). This approach permitted us to visualize and identify compounds on the root surface and presumed root exudates in the rhizosphere. Within a 1.8 cm x 0.6 cm sampling area of a switchgrass rhizosphere, we could observe at least four chemically distinct zones. Using high performance Fourier transform ion cyclotron MS, we were able to accurately annotate numerous molecules co-localized to each of these zones.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Wave-Optics Simulation Framework of Fourier Transform Holography with XMCD

We present a wave-optics simulation framework, implemented within the SRW, for modeling FTH with XMCD contrast. The framework propagates coherent, circularly polarized X-ray wavefronts from an undulator source through the sample and optics to the detector, reconstructing real-space images from the resulting holograms. Three principal extensions are introduced: (i) incorporation of polarization-dependent refractive indices in the sample plane, enabling direct simulation of XMCD contrast, (ii) a memory-efficient wavefront-splitting propagation scheme that treats individual apertures independently and coherently combines their fields at detector, and (iii) an integrated reconstruction module that delivers holographic images within the same framework. Together, these advances establish a versatile tool for quantitative exploration of coherence, aperture geometry, and detector sampling, and for the design and interpretation of XMCD-FTH experiments at synchrotron beamlines.

43 PARTICLE ACCELERATORS↗

Development of multiple source data processing for structural analysis at a regional scale

Various image processing techniques developed for enhancement and extraction of linear features, of interest to the structural geologist, from digital remote sensing, geologic, and gravity data, are presented. These techniques include: (1) automatic detection of linear features and construction of rose diagrams from Landsat MSS data; (2) enhancement of principal structural directions using selective filters on Landsat MSS, Spacelab panchromatic, and HCMM NIR data; (3) directional filtering of Spacelab panchromatic data using Fast Fourier Transform; (4) detection of linear/elongated zones of high thermal gradient from thermal infrared data; and (5) extraction of strong gravimetric gradients from digitized Bouguer anomaly maps. Processing results can be compared to each other through the use of a geocoded database to evaluate the structural importance of each lineament according to its depth: superficial structures in the sedimentary cover, or deeper ones affecting the basement. These image processing techniques were successfully applied to achieve a better understanding of the transition between Provence and the Pyrenees structural blocks, in southeastern France, for an improved structural interpretation of the Mediterranean region.

Carrere, Veronique↗

Seasat synthetic aperture radar observations of wave-current and wave-topographic interactions

This study investigated the capability of a spaceborne, imaging radar system to detect subtle changes in the propagation characteristics of ocean wave systems. Specifically, an evolving surface gravity wave system emanating from Hurricane Ella and propagating toward Cape Hatteras, NC, formed the basis of this investigation. This wave system was successfully imaged by the Seasat synthetic aperture radar (SAR) during revolution 974 on September 3, 1978. Estimates of the dominant wavelength and direction of the ocean waves were derived from the SAR data by using optical Fourier transforms. Environmental data of the test area, which included the surface velocity vector within the Gulf Stream, the location of Hurricane Ella, and local bathymetric information, were used in conjunction with the SAR data to form the basis of this comparative study. Favorable agreement was found between wave rays calculated by utilizing theoretical wave-current and wave-topographic interactions and SAR observed dominant wavelength and direction changes across the Gulf Stream and continental shelf.

Meadows, G. A.↗

Conceptual design of pointing control systems for space station gimballed payloads

A conceptual design of the control system for Payload Pointing Systems (PPS) is developed using classic Proportional-Integral-Derivatives (PID) techniques. The major source of system pointing error is due to the disturbance-rich environment of the space station in the form of gimbal baseplate motions. These baseplate vibrations are characterized using Fast Fourier Transform (FFT) techniques. Both time domain and frequency domain dynamic models are developed to assess control system performance. Three basic methods exist for the improvement of PPS pointing performance: increase control system bandwidth, add Image Motion Compensation, and/or reduce (or change) the baseplate disturbance environment.

Hughes, Robert O.↗

Neural network wavelet technology: A frontier of automation

Neural networks are an outgrowth of interdisciplinary studies concerning the brain. These studies are guiding the field of Artificial Intelligence towards the, so-called, 6th Generation Computer. Enormous amounts of resources have been poured into R/D. Wavelet Transforms (WT) have replaced Fourier Transforms (FT) in Wideband Transient (WT) cases since the discovery of WT in 1985. The list of successful applications includes the following: earthquake prediction; radar identification; speech recognition; stock market forecasting; FBI finger print image compression; and telecommunication ISDN-data compression.

Szu, Harold↗

Decorrelation Times of Photospheric Fields and Flows

We use autocorrelation to investigate evolution in flow fields inferred by applying Fourier Local Correlation Tracking (FLCT) to a sequence of high-resolution (0.3 "), high-cadence (approx = 2 min) line-of-sight magnetograms of NOAA active region (AR) 10930 recorded by the Narrowband Filter Imager (NFI) of the Solar Optical Telescope (SOT) aboard the Hinode satellite over 12 - 13 December 2006. To baseline the timescales of flow evolution, we also autocorrelated the magnetograms, at several spatial binnings, to characterize the lifetimes of active region magnetic structures versus spatial scale. Autocorrelation of flow maps can be used to optimize tracking parameters, to understand tracking algorithms f susceptibility to noise, and to estimate flow lifetimes. Tracking parameters varied include: time interval Delta t between magnetogram pairs tracked, spatial binning applied to the magnetograms, and windowing parameter sigma used in FLCT. Flow structures vary over a range of spatial and temporal scales (including unresolved scales), so tracked flows represent a local average of the flow over a particular range of space and time. We define flow lifetime to be the flow decorrelation time, tau . For Delta t > tau, tracking results represent the average velocity over one or more flow lifetimes. We analyze lifetimes of flow components, divergences, and curls as functions of magnetic field strength and spatial scale. We find a significant trend of increasing lifetimes of flow components, divergences, and curls with field strength, consistent with Lorentz forces partially governing flows in the active photosphere, as well as strong trends of increasing flow lifetime and decreasing magnitudes with increases in both spatial scale and Delta t.

Welsch, B. T.↗

Quantitative approaches for multiscale structural analysis with atomic resolution electron microscopy

Atomic-resolution imaging with scanning transmission electron microscopy is a powerful tool for characterizing the nanoscale structure of materials, in particular features such as defects, local strains, and symmetry-breaking distortions. In addition to advanced instrumentation, the effectiveness of the technique depends on computational image analysis to extract meaningful features from complex datasets recorded in experiments, which can be complicated by the presence of noise and artifacts, small or overlapping features, and the need to scale analysis over large representative areas. Here, we present image analysis approaches which synergize real and reciprocal space information to efficiently and reliably obtain meaningful structural information with picometer scale precision across hundreds of nanometers of material from atomic-resolution electron microscope images. Damping superstructure peaks in reciprocal space allows symmetry-breaking structural distortions to be disentangled from other sources of inhomogeneity and measured with high precision. Real-space fitting of the wavelike signals resulting from Fourier filtering enables absolute quantification of lattice parameter variations and strain, as well as the uncertainty associated with these measurements. Implementations of these algorithms are made available as an open source python package.

36 MATERIALS SCIENCE↗

Apollo 9 multiband photography experiment S065

Fourier analysis was applied to microdensitometer scans of a selected region of one SO65 frame in each of the three black-and-white bands. The approach was unique because a somewhat arbitrary section of the image was used and not limited to available targets as in edge analysis. Comparison of duplicates and calculation of absolute SO65 MTF were done by applying linear systems theory to the spatial spectra of the image scans. It was found that the duplication process was nonlinear and resulted in general amplification of spatial frequency modulation. However, the increase in modulation was offset by a corresponding increase in the granularity of the copies. The amount of increase seemed to be related to the initial granularity, but a direct relationship was not verified. Band-to-band comparison of image quality was achieved in the form of signal-to-noise ratio curves as a function of spatial frequency for each band. From this standpoint the DD band was an order of magnitude better than the other two. These were several factors that restricted the analysis of the Apollo 9 imagery. Among these were the lack of precise sensitometric and optical system data on the high altitude photography. In addition it was determined that there was only one simultaneous pair of high altitude and SO65 frames. Finally, the original SO65 photography was not available for scanning (for obvious reasons), thus eliminating a reference base for granularity and SO65 MTF determination.

Schowengerdt, R. A.↗

Digital image processing for photo-reconnaissance applications

Digital image-processing techniques developed for processing pictures from NASA space vehicles are analyzed in terms of enhancement, quantitative restoration, and information extraction. Digital filtering, and the action of a high frequency filter in the real and Fourier domain are discussed along with color and brightness.

Billingsley, F. C.↗

Near-infrared spectral imaging Michelson interferometer for astronomical applications

The design and operation of an imaging Michelson interferometer-spectrometer used for near-infrared (0.8 micron to 2.5 microns) spectral imaging are reported. The system employs a rapid scan interferometer modified for stable low resolution (250/cm) performance and a 42 element PbS linear detector array. A microcomputer system is described which provides data acquisition, coadding, and Fourier transformation for near real-time presentation of the spectra of all 42 scene elements. The electronic and mechanical designs are discussed and telescope performance data presented.

Wells, C. W.↗

Initial results in the development of a synthetic aperture microwave radiometer

A radiometer that measures the complex correlation of the voltage from pairs of antennas at many different baselines is being developed. Each baseline produces a sample point in the Fourier transform of the scene, and a map of the scene is obtained after all measurements have been made by inverting the transform. A substantial reduction in the antenna collecting area required compared to a conventional imaging radiometer can be obtained in this manner. An aircraft prototype being developed is a hybrid which uses real aperture antennas to obtain resolution along-track (stick antennas) and uses aperture synthesis to obtain resolution across-track. The prototype was flight-tested aboard the NASA P-3 in June 1988. During this flight a map was made of the Delmarva Peninsula south of NASA's Wallops Flight Facility. This initial map shows the major land/water features and compares very favorably with a Landsat image of the area, suggesting a bright outlook for the development of this technique in the future.

Le Vine, David M.↗

The current ability of HST to reveal morphological structure in medium-redshift galaxies

The capabilities of the Faint Object Camera (FOC) and the Wide Field Camera (WFC) are assessed on the basis of a brief program of single-orbit images of medium-faint galaxies. The FOC yielded a good resolved image of a compact galaxy at a blue magnitude J of 20.5 in a single-orbit exposure. WFC images have a survey capability that can include many galaxies per field, with sufficient resolving power to distinguish clearly between galaxies and stars down to the level of 0.2 arcsec, depending on the signal-to-noise ratio, and a reasonable capacity for morphology. Although some morphological detail can be discerned in even the aberrated images, deconvolutions are found to greatly enhance the ability to see structural detail. Even at the low S/N that is provided by single-orbit exposures, the more sophisticated restoration methods offer some advantage over simple Fourier or Lucy techniques.

King, Ivan R.↗

Improving reproducibility in synchrotron tomography using implementation-adapted filters

For reconstructing large tomographic datasets fast, filtered backprojection-type or Fourier-based algorithms are still the method of choice, as they have been for decades. These robust and computationally efficient algorithms have been integrated in a broad range of software packages. The continuous mathematical formulas used for image reconstruction in such algorithms are unambiguous. However, variations in discretization and interpolation result in quantitative differences between reconstructed images, and corresponding segmentations, obtained from different software. This hinders reproducibility of experimental results, making it difficult to ensure that results and conclusions from experiments can be reproduced at different facilities or using different software. In this paper, a way to reduce such differences by optimizing the filter used in analytical algorithms is proposed. These filters can be computed using a wrapper routine around a black-box implementation of a reconstruction algorithm, and lead to quantitatively similar reconstructions. Use cases for this approach are demonstrated by computing implementation-adapted filters for several open-source implementations and applying them to simulated phantoms and real-world data acquired at the synchrotron. Our contribution to a reproducible reconstruction step forms a building block towards a fully reproducible synchrotron tomography data processing pipeline.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Fast and noise-tolerant determination of the center of rotation in tomography

High-quality tomographic reconstruction is not possible without the accurate localization of the center of rotation. Poor localization leads to artifacts in the data and can even cause reconstructions to fail. There are many approaches to solving this problem, some of which involve the collection of full sinograms, or even provisional tomographic reconstructions, in order to determine the center of rotation. Here, a simple method based on the expected symmetry of the Fourier transform of summed projections approximately 180° apart is presented; unlike cross-correlation methods, it requires only a single Fourier transform to compute, and uses mainly low spatial frequency information which is less susceptible to noise. This approach is shown to be fast, and robust against poor signal-to-noise as well as to projection images acquired at angles that are not exactly 180° apart. This rapid method can be useful as a first step in the processing of tomographic data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Soft X-ray reflection ptychography

Scanning transmission X-ray microscopy and ptychography have become mature tools for high-resolution, element-specific imaging of nanoscale structures. However, transmission geometries impose stringent constraints on sample thickness and preparation, thereby limiting investigations of extended or bulk specimens, especially in the soft X-ray region. Here, we demonstrate reflection-geometry soft X-ray ptychography as a robust imaging mode. Instrumental feasibility and spatial resolution are established using a lithographically defined Siemens star and barcode test pattern on a multilayer substrate. We empirically demonstrate a full-pitch spatial resolution of ca. 45 nm from Fourier ring correlation analysis of the reconstructed object. The results highlight the potential of the reflection geometry for nondestructive X-ray studies of materials without the need for transmissive samples.

Guenzing, Damian [Lawrence Berkeley National Labor↗

Microparticle cloud imaging and tracking for data-driven plasma science

Oceans of image and particle track data encountered in plasma interactions with microparticle clouds motivate development and applications of machine-learning (ML) algorithms. A local-constant-velocity tracker, a Kohonen neural network or self-organizing map, the feature tracking kit, and U-Net are described and compared with each other for microparticle cloud datasets generated from exploding wires, dusty plasmas, and atmospheric plasmas. Particle density and the signal-to-noise ratio have been identified as two important factors that affect the tracking accuracy. Fast Fourier transform is used to reveal how U-Net, a deep convolutional neural network developed for non-plasma applications, achieves the improvements for noisy scenes. Viscous effects are revealed in the ballistic motions of the particles from the exploding wires and atmospheric plasmas. Subdiffusion of microparticles satisfying Δr 2 ∝t k (k=0.84±0.02) is obtained from the dusty plasma datasets. Microparticle cloud imaging and tracking, when enhanced with data and ML models, present new possibilities for plasma physics.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗