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CSRI Summer Proceedings 2020

The Computer Science Research Institute (CSRI) brings university faculty and students to Sandia for focused collaborative research on Department of Energy (DOE) computer and computational science problems. The institute provides an opportunity for university researchers to learn about problems in computer and computational science at DOE laboratories. Participants conduct leading-edge research, interact with scientists and engineers at the laboratories, and help transfer results of their research to programs at the labs. Some specific CSRI research interest areas are: scalable solvers, optimization, adaptivity and mesh refinement, graph-based, discrete, and combinatorial algorithms, uncertainty estimation, mesh generation, dynamic load-balancing, virus and other malicious-code defense, visualization, scalable cluster computers, data-intensive computing, environments for scalable computing, parallel input/output, advanced architectures, and theoretical computer science. The CSRI Summer Program is organized by CSRI and typically includes the organization of a weekly seminar series and the publication of a summer proceedings. In 2020, the CSRI summer program was executed completely virtually; all student interns worked from home, due to the COVID-19 pandemic.

97 MATHEMATICS AND COMPUTING↗

The Abundance and Isotopic Composition of Hg in Extraterrestrial Materials

During the three year grant period we made excellent progress in our study of the abundances and isotopic compositions of Hg and other volatile trace elements in extraterrestrial materials. At the time the grant started, our collaborating PI, Dante Lauretts, was a postdoctoral research associate working with Peter Buseck at Arizona State University. The work on chondritic Hg was done in collaboration with Dante Lauretta and Peter Buseck and this study was published in Lauretta et a1 (2001a). In July, 2001 Dante Lauretta accepted a position as an Assistant Professor in the Lunar and Planetary Laboratory at the University of Arizona. His funding was transferred and this grant has supported much of his research activities during his first two years at the U of A. Several other papers are in preparation and will be published soon. We presented papers on this topic at Goldschmidt Conferences, the Lunar and Planetary Science Conferences, and the Annual Meetings of the Meteoritical Society. The work done under this grant has spurred several new directions of inquiry, which we are still pursuing. Included in this paper are the studies of bulk abundances and isotopic compositions of metreoritic Mercury, and the development of a thermal analysis ICP-MS technique applied to thermally liable elements.

Blum, J. D.↗

DOE-ART HT(G)R R&D Overview

The US Government currently has no plans to finance or build advanced nuclear reactors. Instead, the DOE performs research and development to raise the technological readiness of new concepts, fuels and component materials so that private industrial partners are more likely to design and build plants. Develop technologies that can enable new concepts and designs to achieve greater levels of safety and resilience, flexibility of use, sustainability and construction or operational affordability. Collaborate with industry to identify and conduct essential research to reduce technical risk associated with advanced reactor technologies. Sustain essential technical expertise and capabilities within national laboratories, universities, and industry to perform needed research. Collaborate with the Nuclear Regulatory Commission and Standards Developing Organizations (ASME, ANS, ANSI, etc.) to address gaps in codes and standards to support advanced reactor designs

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Interactions Between Microturbulence and Magnetohydrodynamic Instabilities in Magnetized Plasmas (Final Technical Report)

This document details the work accomplished during the period 04/15/2012-01/31/2020 for the collaborative project “Interactions Between Microturbulence and Magnetohydrodynamic Instabilities in Magnetized Plasmas,” and serves as the final report on the University of California, San Diego part of this collaborative project for Department of Energy Office of Science - Fusion Energy Sciences Grant No. DE- SC0007783. This project focused on the development of analytic and computational tools, seeking to better understand the mutual interactions between small-scale temperature-gradient driven microturbulence and macroscopic magnetohydrodynamic (MHD) instabilities, particularly tearing modes, in magnetically confined plasmas relevant for the generation of fusion energy. This project advanced understanding through numerical simulations of different sets of model equations, corresponding to different microturbulence instabilities. Questions addressed included how the magnitudes, spatial structures, and scaling's of turbulent forcing's and drags impact magnetic island dynamics, as well as quantifying the “region of influence” of an island on the microturbulence dynamics. A key finding of the project is that the microturbulence fluctuations and associated cross-field particle and energy fluxes exhibit spatial asymmetries for sufficiently large islands. The results have improved our fundamental understanding of plasma dynamics, motivated new experimental investigations, and will help inform future fusion predictive modeling efforts.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Studies in Support of Venus Aerocapture Utilizing Drag Modulation

Aerocapture has been extensively studied and these studies have shown the benefit for planetary exploration missions. While the traditional approach to aerocapture with lifting configurations and lift-guided modulations have been assessed to be technologically feasible, aerocapture using purely drag modulation was proposed and studied by Prof. Braun and his students. These studies show that if one can assess the feasibility of aerocapture using drag modulation at Venus, and develop tall pole technologies needed at Venus, then this concept is much easier to execute at all other relevant destinations. Based on the above finding, partnered proposals were submitted by Adam Nelessen at JPL and Ethiraj Venkatapathy at Ames in collaboration with Prof. Braun at the University of Colorado, Boulder (UCB). Under this partnership, Ames Research Center (ARC) is working to address some of the key entry technology challenges associated with drag modulation aerocapture at Venus. Drag modulation aerocapture is a simple, scalable, and likely cost-effective way to enhance planetary science missions. The approach envisioned is to design a small spacecraft, that would most likely be a secondary payload, with a removable drag skirt. The vehicle would enter the atmosphere at Venus with a low ballistic coefficient, decelerate rapidly, drop the skirt resulting in a smaller vehicle with a higher ballistic coefficient which would skip out of the atmosphere and enter into a desired orbit. ARC's role in this collaboration is multifold. First of which is to perform design studies on various pre- and post-jettison geometries utilizing a 3-DOF trajectory code to determine the aerodynamics and aerothermodynamics of the vehicles and evaluate viable thermal protection material system designs. Once these design studies are complete, Ames will then perform higher fidelity CFD and TPS sizing to further design the vehicles. Second, the multi-body separation dynamics of the drag modulation event will be explored using both CFD simulations (CART3-D and US3D) as well as possible ballistic range testing. ARC's tools and expertise have been used to assess and advise on the selection of the separating configuration. In addition to the preliminary evaluation, ARC will provide tools and expertise to UCB team members to further assess aerodynamic interactions between the separating bodies and provide guidance as to the feasibility of stable transition.

Beck, Robin↗

Torsional twist of the SARS ‐ CoV and SARS ‐ CoV ‐2 SUD ‐N and SUD ‐M domains

Abstract Coronavirus non‐structural protein 3 (nsp3) forms hexameric crowns of pores in the double membrane vesicle that houses the replication–transcription complex. Nsp3 in SARS‐like viruses has three unique domains absent in other coronavirus nsp3 proteins. Two of these, SUD‐N (Macrodomain 2) and SUD‐M (Macrodomain 3), form two lobes connected by a peptide linker and an interdomain disulfide bridge. We resolve the first complete x‐ray structure of SARS‐CoV SUD‐N/M as well as a mutant variant of SARS‐CoV‐2 SUD‐N/M modified to restore cysteines for interdomain disulfide bond naturally lost by evolution. Comparative analysis of all structures revealed SUD‐N and SUD‐M are not rigidly associated but rather have significant rotational flexibility. Phylogenetic analysis supports that the potential to form the disulfide bond is common across betacoronavirus isolates from many bat species and civets, but also one or both of the cysteines that form the disulfide bond are absent across isolates from bats and pangolins. The absence of these cysteines does not impact viral replication or protein translation.

Rosas‐Lemus, Monica [Department of Microbiology‐Im↗

Dark Matter in the Universe and in the Galaxy

During the past four years, Prof. Kamionkowski and collaborators have made progress in research on the nature and distribution of dark-matter in the Universe and in the Galaxy, and on related topics in astrophysics and cosmology. We have made progress on research on the cosmic microwave background, large-scale structure, issues related to particle dark matter, and the gamma-ray-burst enigma. A significant fraction of the research supported by this ATP has been on the cosmic microwave background (CMB). Prof. Kamionkowski and collaborators showed how the polarization of the CMB could be used to detect long-wavelength gravitational waves, such as those produced by inflation. With Kosowsky, Prof. Kamionkowski calculated the amplitude of a stochastic gravitational-wave background that could be detected for a satellite experiment of a given sensitivity and angular resolution. They showed that polarization should improve the sensitivity oa MAP to these gravity waves, and that the Planck Surveyor should do even better. Prof. Kamionkowski, Caldwell, and a student calculated and illustrated the CMB temperature/polarization pattern produced by a single plane-wave gravitational wave. They calculated the amplitude of such a wave that would be detectable with MAP and Planck, and compared that with the sensitivity of traditional gravitational-wave detectors like LIGO and LISA. With Lue and Wang, the PI showed how parity violation from new high-energy physics could conceivably give rise to an observable signature in the CMB polarization. With Loeb, Prof. Kamionkowski showed how measurement of the polarization of CMB photons scattered by hot gas in a cluster could be used to determine the quadrupole moment of the CMB incident on that cluster. Prof. Kamionkowski and Jaffe calculated the amplitude of secondary anisotropies produced by scattering of CMB photons from reionized regions. Research has also been carried out on probing the large-scale distribution of mass in the Universe today, and on structure-formation theories. They investigated the possibility of determining the large-scale distribution of mass in the Universe via measurement of ellipticity-ellipticity correlations in the FIRST radio survey induced by weak gravitational lensing due to mass inhomogeneities along the line of sight. Dr. Summers, Prof. Kamionkowski, and a student investigated the distribution of protogalactic masses and angular momenta in an effort to understand how the luminosity function and angular-momentum distribution of disk galaxies arises from an initial power spectrum of density perturbations. Several projects related to the distribution and possible detection of dark matter in our Galactic halo were studied. The PI was involved in several projects involving the calculation of nuclear-reaction rates needed for stellar evolution and for predictions of solar-neutrino fluxes.

Kamionkowski, Marc↗

CRCNS21 Computational Models of Multisensory Integration by Upper Limb in Humanoids and Amputees

This international collaborative research project between Johns Hopkins University (JHU) and the Technical University of Munich (TUM) investigated how the human brain processes and integrates multiple types of sensory information, such as touch and force, with the goal of improving prosthetic limbs for amputees and advancing sensory capabilities in humanoid robots. The research advanced our understanding of how the brain responds to sensory feedback in upper-limb amputees. Through experiments in which amputees received electrical stimulation while performing phantom hand movements, we demonstrated that sensory feedback activates the cortical sensorimotor and multisensory regions, and that these regions communicate dynamically during stimulation. Experiments with intact-limb participants explored the integration of visual, haptic, and force feedback, as well as in virtual reality motor training, further showing how the brain processes multimodal sensory information. In addition, this research inspired work on examining the reliability of where amputees perceive sensations over time, which contributed to a successful doctoral fellowship for continued investigation. Our collaborators at TUM improved multimodal sensor technology combining tactile and thermal feedback for humanoid robots, demonstrating the feasibility of integrating multiple sensor types into a unified system for detecting and responding to environmental stimuli. The experimental methods and analysis techniques developed across both teams, including functional network analysis and multimodal sensor integration, provide a foundation for future research in prosthetics and robotics. This research benefits the public by generating knowledge about how amputees process restored sensory information. Advances in humanoid sensing contribute to safer human-robot interaction. The project also fostered international collaboration and cross-disciplinary training: one TUM doctoral student spent a summer at JHU working on multimodal sensor integration, while two JHU students traveled to TUM to host workshops on neuromorphic sensory encoding and sensory integration.

42 ENGINEERING↗

University/industry collaboration in remote sensing education

A graduate level course covering the development and structure of geographical information systems and the acquisition and processing of LANDSAT data for input to these systems is described. A portion of the course was devoted to hands-on classification of LANDSAT digital tapes utilizing both university and private industry processing systems. This industry/university collaboration was extremely successful and resulted in a high quality course. It gave the students an excellent experience in working in a real-world client/consultant relationship undertaken to accomplish a specific task. There were two key factors in the success of the collaboration. First, there was a very careful product definition and advance meetings between the University faculty and the company personnel to be involved. Second, the students were not taken into the industrial facility until late in the course, after they had a reasonable knowledge of the physical bases of remote sensing, the concept of spectral signatures, and the fundamentals of pattern analysis.

Ragan, R. M.↗

Explanation of the seasonal variation of cosmic multiple muon events observed with the NOvA Near Detector

The flux of cosmic ray muons at the Earth’s surface exhibits seasonal variations due to changes in the temperature of the atmosphere affecting the production and decay of mesons in the upper atmosphere. Using 1473 live days of data collected by the NuMI Off-axis 𝜈 𝑒 Appearance (NOvA) Near Detector during 2018–2022, we studied the seasonal pattern in the multiple-muon event rate. The data confirm an anticorrelation between the multiple-muon event rate and effective atmospheric temperature, consistent across all the years of data. Previous analyses from MINOS and NOvA saw a similar anticorrelation but did not include an explanation. We find that this anticorrelation is driven by altitude–geometry effects as the average muon production height changes with the season. This has been studied with a CORSIKA cosmic ray simulation package by varying atmospheric parameters, and provides an explanation to a longstanding discrepancy between the seasonal phases of single and multiple-muon events.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

D and D Research on KM-IT Platform - 20494

The Knowledge Management Information Tool (KM-IT) is a web-based system developed to maintain and preserve the Department of Energy's (DoE's) knowledge base. The system was developed by Florida International University's Applied Research Center (FIU-ARC) with the support of the D and D community including the DOE Office of Environmental Management, and with the collaboration and support of the DoE's Energy Facility Contractors Group (EFCOG) and the former ALARA Centers at Hanford and Savannah. The KM-IT system is a community driven system tailored to serve the technical issues faced by the workforce across the DOE Complex. This KM-IT web-based interactive system is operational and available for use at www.dndkm.org and is currently comprised of the following modules: Web Crawler, Hotline, Technology, Hanford's ALARA Center Reports, Specialist Directory, Lessons Learned, Best Practices, Video/Picture Library, Vendors and Industry News. The Web Crawler dynamically searches through the KM-IT repository as well as the web and displays search results based on the search criteria. The Hotline allows registered users to post questions/problems related to D and D and to receive solutions from a subject-matter specialist. The Technology module serves as repository of D and D technologies and contains technology/ demonstration fact sheets and vendor information. D and D community members can add Lessons Learned, Best Practices, and Pictures/Videos to the D and D repository, after a formal approval process. The Vendor module provides a directory of commercial vendors who provide D and D related technologies, supplies, and services. KM-IT makes an excellent use of the knowledge that exists within the D and D community by allowing D and D project managers around the DOE complex to collaborate by sharing innovative ideas, past experiences, and practices and by maintaining a directory of subject matter specialists. FIU has developed the dedicated module on KM-IT platform to publish D and D research being performed at FIU. This module highlights current EM research efforts and activities in support of D and D being performed at FIU/SRNL associated with fixatives and intumescent products. FIU will expand this module to include the recent and current D and D research being performed across multiple DOE EM sites, national labs and universities. FIU will collaborate with SRNL, INL, ANL and other universities to explore and publish D and D research activities on KM-IT. As a result, the user community will have a centralized location to review new D and D related research across the DOE EM complex. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Analysis of thermal response of new diagnostic probe in TCV

Thermal response of the new multi-purpose diagnostic probe inside the TCV (Tokamak à Configuration Variable) tokamak is studied. The New Probe Head (NPH) was constructed at the University of Innsbruck and developed in collaboration with various European laboratories within EUROfusion program. The NPH can be used in different MST devices by applying corresponding adapters. Its design, followed by the prototype, has to go through a number of tests (numerical and experimental), before it can be used in the tokamak environment, where it has to withstand repeated exposure to the Scrape-Off-Layer (SOL) plasma. Presented numerical analyses of the NPH thermal response inside the TCV tokamak are performed by the Jožef Stefan Institute.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Stairway to discovery: A report on the CMS programme of cross section measurements from millibarns to femtobarns

The Large Hadron Collider at CERN, delivering proton-proton collisions at much higher energies and far higher luminosities than previous machines, has enabled a comprehensive programme of measurements of the standard model (SM) processes by the CMS experiment. These unprecedented capabilities facilitate precise measurements of the properties of a wide array of processes, the most fundamental being cross sections. The discovery of the Higgs boson and the measurement of its mass became the keystone of the SM. Knowledge of the mass of the Higgs boson allows precision comparisons of the predictions of the SM with the corresponding measurements. These measurements span the range from one of the most copious SM processes, the total inelastic cross section for proton-proton interactions, to the rarest ones, such as Higgs boson pair production. They cover the production of Higgs bosons, top quarks, single and multibosons, and hadronic jets. Associated parameters, such as coupling constants, are also measured. These cross section measurements can be pictured as a descending stairway, on which the lowest steps represent the rarest processes allowed by the SM, some never seen before.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Fabrication of superconducting Nb 3 Sn film by Co-sputtering

High-efficiency SRF cavities are the key technology to construct cost-effective CW SRF accelerators. Improvements in the efficiency of SRF cavities are realized by using novel materials, such as niobium-tin. Advances in niobium-tin coatings on the inner surface of SRF cavities showed the potential for this material to increase the operating temperature of the SRF cavity to above 4 K, leading to significant reduction of the capital and operating cost of SRF accelerators. Among the techniques used to apply the niobium-tin coating to the surface of the SRF cavity is sputtering. Old Dominion University, Jefferson Lab, and Fermilab are collaborating on developing an optimized niobium-tin coating of the inside surface of niobium SRF cavities using a recently-developed cylindrical sputtering system. This research will result in optimized sputtering coating techniques leading to high efficiency SRF structures.

42 ENGINEERING↗

The miniJPAS survey quasar selection – II. Machine learning classification with photometric measurements and uncertainties

Astrophysical surveys rely heavily on the classification of sources as stars, galaxies, or quasars from multiband photometry. Surveys in narrow-band filters allow for greater discriminatory power, but the variety of different types and redshifts of the objects present a challenge to standard template-based methods. In this work, which is part of a larger effort that aims at building a catalogue of quasars from the miniJPAS survey, we present a machine learning-based method that employs convolutional neural networks (CNNs) to classify point-like sources including the information in the measurement errors. We validate our methods using data from the miniJPAS survey, a proof-of-concept project of the Javalambre Physics of the Accelerating Universe Astrophysical Survey (J-PAS) collaboration covering ∼1 deg 2 of the northern sky using the 56 narrow-band filters of the J-PAS survey. Due to the scarcity of real data, we trained our algorithms using mocks that were purpose-built to reproduce the distributions of different types of objects that we expect to find in the miniJPAS survey, as well as the properties of the real observations in terms of signal and noise. We compare the performance of the CNNs with other well-established machine learning classification methods based on decision trees, finding that the CNNs improve the classification when the measurement errors are provided as inputs. The predicted distribution of objects in miniJPAS is consistent with the putative luminosity functions of stars, quasars, and unresolved galaxies. Our results are a proof of concept for the idea that the J-PAS survey will be able to detect unprecedented numbers of quasars with high confidence.

79 ASTRONOMY AND ASTROPHYSICS↗

Finite-volume formalism for physical processes with an electroweak loop integral

This study investigates finite-volume effects in physical processes that involve the combination of long-range hadronic matrix elements with electroweak loop integrals. We adopt the approach of implementing the electroweak part as the infinite-volume version, which is denoted as the EW ∞ method in this work. A general approach is established for correcting finite-volume effects in cases where the hadronic intermediate states are dominated by either a single particle or two particles. For the single-particle case, this work derives the infinite volume reconstruction method from a new perspective. For the two-particle case, we provide the correction formulas for power-law finite-volume effects and unphysical terms with exponentially divergent time dependence. The finite-volume formalism developed in this study has broad applications, including the QED corrections in various processes and the two-photon exchange contribution in 𝐾 𝐿 → 𝜇 + ⁢𝜇 − or 𝜂 → 𝜇 + ⁢𝜇 − decays.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Test of Lepton Flavor Universality with B s 0 → ϕ ℓ + ℓ − Decays

Lepton flavor universality in rare b → s transitions is tested for the first time using B s 0 meson decays. The measurements are performed using p p collision data collected by the LHCb experiment between 2011 and 2018, corresponding to a total integrated luminosity of 9 fb − 1 . Branching fraction ratios between the B s 0 → ϕ e + e − and B s 0 → ϕ μ + μ − decays are measured in three regions of dilepton mass squared, q 2 , with 0.1 < q 2 < 1.1 , 1.1 < q 2 < 6.0 , and 15 < q 2 < 19 GeV 2 / c 4 . The results agree with the standard model expectation of lepton flavor universality. © 2025 CERN, for the LHCb Collaboration 2025 CERN

Aaij, R. (ORCID:0000000305331952)↗