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At least 487 records · Page 27

Stoichiometric Thiol Redox Proteomics for Quantifying Cellular Responses to Perturbations

Post-translational modifications regulate the structure and function of proteins that can result in changes to the activity of different pathways. These include modifications altering the redox state of thiol groups on protein cysteine residues, which are sensitive to oxidative environments. While mass spectrometry has advanced the identification of protein thiol modifications and expanded our knowledge of redox-sensitive pathways, the quantitative aspect of this technique is critical for the field of redox proteomics. In this review, we describe how mass spectrometry-based redox proteomics has enabled researchers to accurately quantify the stoichiometry of reversible oxidative modifications on specific cysteine residues of proteins. We will describe advancements in the methodology that allow for the absolute quantitation of thiol modifications, as well as recent reports that have implemented this approach. We will also highlight the significance and application of such measurements and why they are informative for the field of redox biology.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Predicting Biomass Yields of Advanced Switchgrass Cultivars for Bioenergy and Ecosystem Services Using Machine Learning

The production of advanced perennial bioenergy crops within marginal areas of the agricultural landscape is gaining interest due to its potential to sustainably produce feedstocks for biofuels and bioproducts while also improving the sustainability and resilience of commodity crop production. However, predicting the biomass yields of this production system is challenging because marginal areas are often relatively small and spread around agricultural fields and are typically associated with various abiotic conditions that limit crop production. Machine learning (ML) offers a viable solution as a biomass yield prediction tool because it is suited to predicting relationships with complex functional associations. The objectives of this study were to (1) evaluate the accuracy of commonly applied ML algorithms in agricultural applications for predicting the biomass yields of advanced switchgrass cultivars for bioenergy and ecosystem services and (2) determine the most important biomass yield predictors. Datasets on biomass yield, weather, land marginality, soil properties, and agronomic management were generated from three field study sites in two U.S. Midwest states (Illinois and Iowa) over three growing seasons. The ML algorithms evaluated in the study included random forests (RFs), gradient boosting machines (GBMs), artificial neural networks (ANNs), K-neighbors regressor (KNR), AdaBoost regressor (ABR), and partial least squares regression (PLSR). Coefficient of determination (R 2 ) and mean absolute error (MAE) were used to evaluate the predictive accuracy of the tested algorithms. Results showed that the ensemble methods, RF (R 2 = 0.86, MAE = 0.62 Mg/ha), GBM (R 2 = 0.88, MAE = 0.57 Mg/ha), and GBM (R 2 = 0.78, MAE = 0.66 Mg/ha), were the most accurate in predicting biomass yields of the Independence, Liberty, and Shawnee switchgrass cultivars, respectively. This is in agreement with similar studies that apply ML to multi-feature problems where traditional statistical methods are less applicable and datasets used were considered to be relatively small for ANNs. Consistent with previous studies on switchgrass, the most important predictors of biomass yield included average annual temperature, average growing season temperature, sum of the growing season precipitation, field slope, and elevation. This study helps pave the way for applying ML as a management tool for alternative bioenergy landscapes where understanding agronomic and environmental performance of a multifunctional cropping system seasonally and interannually at the sub-field scale is critical.

09 BIOMASS FUELS↗

On total cross sections and slopes at superhigh energies

Hadron-hadron and hadron-nucleus interactions are investigated in the framework of the Reggeon field theory with critical and supercritical pomerons and multiple scattering theory. A good agreement is obtained with experimental data on cross sections of proton-proton and proton-nucleus interactions at high energies.

Yeremian, S. S.↗

On the interpretation of the beta(sub p) relation in interstellar clouds

Troland and Heiles (1986) have recently presented an updated compilation of observational data concerning the relationship between the interstellar magnetic field strength B and the gas density rho (or, equivalently, the particle density n). One of the main findings of their survey was that B remains constant over the density range 0.1 - approx. 100 cu. cm and shows evidence for increase only a higher densities. They compared this result with theoretical predictions based on the Parker-instability scenario for the formation and evolution of interstellar clouds in the presence of the galactic magnetic field. In this picture, low-density gas is driven by the magnetic Rayleigh-Taylor instability into magnetic valleys, where it accumulates into denser concentrations. The gas initially flows along the magnetic field lines and there is little increase of the field strength with density; B only starts to rise when n becomes large enough for self-gravity to begin competing with the magnetic stresses. For a cloud mass of approx. 1,000 sub M and the measured background field strength, the critical density for contraction in approx. 75 cu. cm. Troland and Heiles therefore concluded that this scenario is basically consistent with the observations. This conclusion is debated.

Koenigl, A.↗

Critique of the vertical gradient of gravity

Growing interest in high precision studies of the Earth's gravitational field warrant a critical review of precision requirements to yield useful results. Several problems are now under consideration. All of these problems involve, more or less, the precise value of the vertical gradients of gravity. The principle conclusion from this review is that the essential absence of Free Air Vertical Gravity Gradient control and actual values of gravimeter calibrations require serious attention. Large errors in high topography on official published gravity maps also cannot be ignored.

Hammer, Sigmund↗

Human factors model concerning the man-machine interface of mining crewstations

The U.S. Bureau of Mines is developing a computer model to analyze the human factors aspect of mining machine operator compartments. The model will be used as a research tool and as a design aid. It will have the capability to perform the following: simulated anthropometric or reach assessment, visibility analysis, illumination analysis, structural analysis of the protective canopy, operator fatigue analysis, and computation of an ingress-egress rating. The model will make extensive use of graphics to simplify data input and output. Two dimensional orthographic projections of the machine and its operator compartment are digitized and the data rebuilt into a three dimensional representation of the mining machine. Anthropometric data from either an individual or any size population may be used. The model is intended for use by equipment manufacturers and mining companies during initial design work on new machines. In addition to its use in machine design, the model should prove helpful as an accident investigation tool and for determining the effects of machine modifications made in the field on the critical areas of visibility and control reach ability.

Rider, James P.↗

Simple Superconducting "Permanent" Electromagnet

Proposed short tube of high-temperature-superconducting material like YBa2Cu3O7 acts as strong electromagnet that flows as long as magnetic field remains below critical value and temperature of cylinder maintained sufficiently below superconducting-transition temperature. Design exploits maximally anisotropy of high-temperature-superconducting material.

Israelson, Ulf E.↗

Sharp edges to neutral hydrogen disks in galaxies and the extragalactic radiation field

It is shown that the very sharp truncation of the neutral hydrogen distribution seen in NGC 3198 (and probably M33) is well modeled as the result of ionization of the atomic gas by the extragalactic radiation field. Below a critical column density of about a few times 10 exp 19/sq cm the gas is dominantly ionized and undetectable in the 21-cm line. It is inferred from the photoionization models that the total disk gas distribution in NGC 3198 is actually fairly axisymmetric. The critical column density for ionization is not a strong function of galaxy mass or mass distribution; thus, all galaxies should show a cutoff at approximately the same column density. Specific models of 3198 suggest that the extragalactic ionizing photon flux is 5000-10,000 photons/sq cm s.

Maloney, Philip↗

Electric propulsion system technology

The work performed in fiscal year (FY) 1991 under the Propulsion Technology Program RTOP (Research and Technology Objectives and Plans) No. (55) 506-42-31 for Low-Thrust Primary and Auxiliary Propulsion technology development is described. The objectives of this work fall under two broad categories. The first of these deals with the development of ion engines for primary propulsion in support of solar system exploration. The second with the advancement of steady-state magnetoplasmadynamic (MPD) thruster technology at 100 kW to multimegawatt input power levels. The major technology issues for ion propulsion are demonstration of adequate engine life at the 5 to 10 kW power level and scaling ion engines to power levels of tens to hundreds of kilowatts. Tests of a new technique in which the decelerator grid of a three-grid ion accelerator system is biased negative of neutralizer common potential in order to collect facility induced charge-exchange ions are described. These tests indicate that this SAND (Screen, Accelerator, Negative Decelerator) configuration may enable long duration ion engine endurance tests to be performed at vacuum chamber pressures an order of magnitude higher than previously possible. The corresponding reduction in pumping speed requirements enables endurance tests of 10 kW class ion engines to be performed within the resources of existing technology programs. The results of a successful 5,000-hr endurance of a xenon hollow cathode operating at an emission current of 25 A are described, as well as the initial tests of hollow cathodes operating on a mixture of argon and 3 percent nitrogen. Work performed on the development of carbon/carbon grids, a multi-orifice hollow cathode, and discharge chamber erosion reduction through the addition of nitrogen are also described. Critical applied-field MPD thruster technical issues remain to be resolved, including demonstration of reliable steady-state operation at input powers of hundreds to thousands of kilowatts, achievement of thruster efficiency and specific impulse levels required for missions of interest, and demonstration of adequate engine life at these input power, efficiency, and specific impulse levels. To address these issues we have designed, built, and tested a 100 kW class, radiation-cooled applied-field MPD thruster and a unique dual-beam thrust stand that enables separate measurements of the applied- and self-field thrust components. We have also initiated the development of cathode thermal and plasma sheath models that will eventually be used to guide the experimental program. In conjunction with the cathode modeling, a new cathode test facility is being constructed. This facility will support the study of cathode thermal behavior and erosion mechanisms, the diagnosis of the near-cathode plasma and the development and endurance testing of new, high-current cathode designs. To facilitate understanding of electrode surface phenomenon, we have implemented a telephoto technique to obtain photographs of the electrodes during engine operation. In order to reduce the background vacuum tank pressure during steady-state engine operation in order to obtain high fidelity anode thermal data, we have developed and are evaluating a gas-dynamic diffuser. A review of experience with alkali metal propellants for MPD thrusters led to the conclusion that alkali metals, particularly lithium, offer the potential for significant engine performance and lifetime improvements. These propellants are also condensible at room temperature, substantially reducing test facility pumping requirements. The most significant systems-level issue is the potential for spacecraft contamination. Subsequent experimental and theoretical efforts should be directed toward verifying the performance and lifetime gains and characterizing the thruster flow field to assess its impact on spacecraft surfaces. Consequently, we have begun the design and development of a new facility to study engine operation with alkali metal propellants.

Brophy, John R.↗

The Yeh-Stratton Criterion for Stress Concentrations on Fiber -Reinforced Composite Materials

The Yeh-Stratton criterion developed from a yielding criterion is modified to a generalized failure criterion and applied to fiber-reinforced composites with a central crack or a circular cutout under tensile loadings. The purpose of a material failure criterion is to establish a theoretical margin of safety and to be validated by experiments. It is necessary to obtain the crack tip stress field before a failure criterion of composite materials is applied. However, the crack tip stress field is complicated since there are numerous factors that influence the crack tip stress distribution. The understanding of the factors that contribute to crack tip stress field is of critical importance in analyzing composite laminates.

Yeh, Hsieng-Yang↗

Development of a Space Radiation Monte Carlo Computer Simulation

The ultimate purpose of this effort is to undertake the development of a computer simulation of the radiation environment encountered in spacecraft which is based upon the Monte Carlo technique. The current plan is to adapt and modify a Monte Carlo calculation code known as FLUKA, which is presently used in high energy and heavy ion physics, to simulate the radiation environment present in spacecraft during missions. The initial effort would be directed towards modeling the MIR and Space Shuttle environments, but the long range goal is to develop a program for the accurate prediction of the radiation environment likely to be encountered on future planned endeavors such as the Space Station, a Lunar Return Mission, or a Mars Mission. The longer the mission, especially those which will not have the shielding protection of the earth's magnetic field, the more critical the radiation threat will be. The ultimate goal of this research is to produce a code that will be useful to mission planners and engineers who need to have detailed projections of radiation exposures at specified locations within the spacecraft and for either specific times during the mission or integrated over the entire mission. In concert with the development of the simulation, it is desired to integrate it with a state-of-the-art interactive 3-D graphics-capable analysis package known as ROOT, to allow easy investigation and visualization of the results. The efforts reported on here include the initial development of the program and the demonstration of the efficacy of the technique through a model simulation of the MIR environment. This information was used to write a proposal to obtain follow-on permanent funding for this project.

Pinsky, Lawrence S.↗

Protoplanetary Nebula Evolution using the Beta Viscosity Model

The evolutionary dynamics of a protoplanetary disk is an important component of the planet formation process. In particular, the dynamic and thermodynamic field plays a critical role in chemical evolution, the migration of dust particles in the nebula, and the radial transport of meteoritic components. The dynamic evolution is investigated using analytical solutions of the surface density transport equations using a turbulence model based on hydrodynamic generation of turbulence. It captures the major properties of the disk including region of separation between radial inflow and-outflow and the evolution of the central plane temperature. The analytical formulas are compared with available numerical solutions based on the alpha viscosity model. The beta viscosity model, heretofore used for steady-state disks, is shown to be a useful approximation for unsteady problems.

Davis, Sanford S.↗

OVOC (Oxygenated Volatile Organic Chemicals) in the Global Atmosphere: Atmospheric Budgets, Oceanic Concentrations, and Uncertainties

Airborne measurements of oxygenated volatile organic chemicals (OVOC), OH free radicals, and tracers of pollution were performed over the Pacific during Winter/Spring of 2001. Large concentrations of OVOC are present in the global troposphere and are expected to play an important role in atmospheric chemistry. Their total abundance (SIGMAOVOC) was nearly twice that of non-methane hydrocarbons (SIGMAC2-C8 NMHC). Throughout the troposphere, the OH reactivity of OVOC is comparable to that of methane and far exceeds that of NHMC. A comparison of these data with western Pacific observations collected some seven years earlier (Feb.-March, 1994) did not reveal significant differences. Analysis of the relative enhancement of selected OVOC with respect to CH3Cl and CO in twelve plumes originating from fires and sampled in the free troposphere (3-11 km) is used to assess their primary and secondary emissions from biomass combustion. The composition of these plumes also indicates a large shift of reactive nitrogen into the PAN reservoir thereby limiting ozone formation. These data are combined with other observations and interpreted with the help of a global 3-D model to assess OVOC global sources and sinks. We further interpret atmospheric observations with the help of an air-sea exchange model io show that oceans can be both net so~rces and sinks. An extremely large oceanic reservoir of OVOC, that exceeds the atmospheric reservoir by more than an order of magnitude, can be inferred to be present. We conclude that OVOC sources are extremely large (150-500 TgC y-1) but remain poorly quantified. In many cases, measured concentrations are uncertain and incompatible with our present knowledge of atmospheric chemistry. Results based on observations from several field studies and critical gaps will be discussed.

Singh, Hanwant B.↗

Thermal Conductivity Change Kinetics of Ceramic Thermal Barrier Coatings Determined by the Steady-State Laser Heat Flux Technique

A steady-state laser heat flux technique has been developed at the NASA Glenn Research Center at Lewis Field to obtain critical thermal conductivity data of ceramic thermal barrier coatings under the temperature and thermal gradients that are realistically expected to be encountered in advanced engine systems. In this study, thermal conductivity change kinetics of a plasma-sprayed, 254-mm-thick ZrO2-8 wt % Y2O3 ceramic coating were obtained at high temperatures. During the testing, the temperature gradients across the coating system were carefully measured by the surface and back pyrometers and an embedded miniature thermocouple in the substrate. The actual heat flux passing through the coating system was determined from the metal substrate temperature drop (measured by the embedded miniature thermocouple and the back pyrometer) combined with one-dimensional heat transfer models.

Zhu, Dongming↗

Efficient Agent-Based Models for Non-Genomic Evolution

Modeling dynamical systems composed of aggregations of primitive proteins is critical to the field of astrobiological science involving early evolutionary structures and the origins of life. Unfortunately traditional non-multi-agent methods either require oversimplified models or are slow to converge to adequate solutions. This paper shows how to address these deficiencies by modeling the protein aggregations through a utility based multi-agent system. In this method each agent controls the properties of a set of proteins assigned to that agent. Some of these properties determine the dynamics of the system, such as the ability for some proteins to join or split other proteins, while additional properties determine the aggregation s fitness as a viable primitive cell. We show that over a wide range of starting conditions, there are mechanisins that allow protein aggregations to achieve high values of overall fitness. In addition through the use of agent-specific utilities that remain aligned with the overall global utility, we are able to reach these conclusions with 50 times fewer learning steps.

Gupta, Nachi↗

The Neutron Star Zoo

Neutron stars are a very diverse population, both in their observational and their physical properties. They prefer to radiate most of their energy at X-ray and gamma-ray wavelengths. But whether their emission is powered by rotation, accretion, heat, magnetic fields or nuclear reactions, they are all different species of the same animal whose magnetic field evolution and interior composition remain a mystery. This article will broadly review the properties of inhabitants of the neutron star zoo, with emphasis on their high-energy emission. XXX Neutron stars are found in a wide variety of sources, displaying an amazing array of behavior. They can be isolated or in binary systems, accreting, heating, cooling, spinning down, spinning up, pulsing, flaring and bursting. The one property that seems to determine their behavior most strongly is their magnetic field strength, structure and evolution. The hot polar caps, bursts and flares of magnetars are likely due to the rapid decay and twisting of their superstrong magnetic fields, whose very existence requires some kind of early dynamo activity. The intermediate-strength magnetic fields of RPPs determines their spin-down behavior and radiation properties. However, the overlap of the magnetar and RPP populations is not understood at present. Why don't high-field RPPs burst or flare? Why don't lower-field magnetars sometimes behave more like RPPs? INS may be old magnetars whose high fields have decayed, but they do not account for the existence of younger RPPs with magnetar-strength fields. Not only the strength of the magnetic field but also its configuration may be important in making a NS a magnetar or a RPP. Magnetic field decay is a critical link between other NS populations as well. "Decay" of the magnetic field is necessary for normal RPPs to evolve into MSPs through accretion and spin up in LMXBs. Some kind of accretion-driven field reduction is the most likely mechanism, but it is controversial since it is not clear how effective it is or on what timescale a buried field might re-emerge. One piece of evidence in favor of accretion-driven field reduction is the fact that NSs in LMXBs, which are older systems (> 108 yr), have mostly low fields and NSs in HMXBs, which are younger systems (107 − 108 yr), have higher fields. This may be an indication that accretion-driven field reduction or decay has not had enough time to operate in HMXBs but has in LMXBs. However, there does not seem to be any evidence of decaying fields in either the LMXB or HMXB populations; e.g. smaller magnetic fields in older systems. On the other hand, CCOs are very young so if they acquired their low fields through mass fallback accretion, the field submergence would have had to operate on much faster timescales than it apparently does in LMXBs. But as we continue to find new species in the NS zoo, one of these may someday be the "Rosetta Stone" that will give us the clues for solving these puzzles.

Zoo↗

NASA NDE Program

The current activities in the National Aeronautics and Space Administration Nondestructive Evaluation (NDE) Program are presented. The topics covered include organizational communications, orbital weld inspection, electric field imaging, fracture critical probability of detection validation, monitoring of thermal protection systems, physical and document standards, image quality indicators, integrity of composite pressure vessels, and NDE for additively manufactured components.

Generazio, Ed↗