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NASA NTRS2000

Estimating Forest Vertical Structure from Multialtitude, Fixed-Baseline Radar Interferometric and Polarimetric Data

Parameters describing the vertical structure of forests, for example tree height, height-to-base-of-live-crown, underlying topography, and leaf area density, bear on land-surface, biogeochemical, and climate modeling efforts. Single, fixed-baseline interferometric synthetic aperture radar (INSAR) normalized cross-correlations constitute two observations from which to estimate forest vertical structure parameters: Cross-correlation amplitude and phase. Multialtitude INSAR observations increase the effective number of baselines potentially enabling the estimation of a larger set of vertical-structure parameters. Polarimetry and polarimetric interferometry can further extend the observation set. This paper describes the first acquisition of multialtitude INSAR for the purpose of estimating the parameters describing a vegetated land surface. These data were collected over ponderosa pine in central Oregon near longitude and latitude -121 37 25 and 44 29 56. The JPL interferometric TOPSAR system was flown at the standard 8-km altitude, and also at 4-km and 2-km altitudes, in a race track. A reference line including the above coordinates was maintained at 35 deg for both the north-east heading and the return southwest heading, at all altitudes. In addition to the three altitudes for interferometry, one line was flown with full zero-baseline polarimetry at the 8-km altitude. A preliminary analysis of part of the data collected suggests that they are consistent with one of two physical models describing the vegetation: 1) a single-layer, randomly oriented forest volume with a very strong ground return or 2) a multilayered randomly oriented volume; a homogeneous, single-layer model with no ground return cannot account for the multialtitude correlation amplitudes. Below the inconsistency of the data with a single-layer model is followed by analysis scenarios which include either the ground or a layered structure. The ground returns suggested by this preliminary analysis seem too strong to be plausible, but parameters describing a two-layer compare reasonably well to a field-measured probability distribution of tree heights in the area.

Treuhaft, Robert N.↗
NASA NTRS2000

Fusion of AIRSAR and TM Data for Parameter Classification and Estimation in Dense and Hilly Forests

The expanded remotely sensed data space consisting of coincident radar backscatter and optical reflectance data provides for a more complete description of the Earth surface. This is especially useful where many parameters are needed to describe a certain scene, such as in the presence of dense and complex-structured vegetation or where there is considerable underlying topography. The goal of this paper is to use a combination of radar and optical data to develop a methodology for parameter classification for dense and hilly forests, and further, class-specific parameter estimation. The area to be used in this study is the H. J. Andrews Forest in Oregon, one of the Long-Term Ecological Research (LTER) sites in the US. This area consists of various dense old-growth conifer stands, and contains significant topographic relief. The Andrews forest has been the subject of many ecological studies over several decades, resulting in an abundance of ground measurements. Recently, biomass and leaf-area index (LAI) values for approximately 30 reference stands have also become available which span a large range of those parameters. The remote sensing data types to be used are the C-, L-, and P-band polarimetric radar data from the JPL airborne SAR (AIRSAR), the C-band single-polarization data from the JPL topographic SAR (TOPSAR), and the Thematic Mapper (TM) data from Landsat, all acquired in late April 1998. The total number of useful independent data channels from the AIRSAR is 15 (three frequencies, each with three unique polarizations and amplitude and phase of the like-polarized correlation), from the TOPSAR is 2 (amplitude and phase of the interferometric correlation), and from the TM is 6 (the thermal band is not used). The range pixel spacing of the AIRSAR is 3.3m for C- and L-bands and 6.6m for P-band. The TOPSAR pixel spacing is 10m, and the TM pixel size is 30m. To achieve parameter classification, first a number of parameters are defined which are of interest to ecologists for forest process modeling. These parameters include total biomass, leaf biomass, LAI, and tree height. The remote sensing data from radar and TM are used to formulate a multivariate analysis problem given the ground measurements of the parameters. Each class of each parameter is defined by a probability density function (pdf), the spread of which defines the range of that class. High classification accuracy results from situations in which little overlap occurs between pdfs. Classification results provide the basis for the future work of class-specific parameter estimation using radar and optical data. This work was performed in part by the Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, and in part by the NASA Ames Research Center, Moffett Field, CA, both under contract from the National Aeronautics and Space Administration.

Moghaddam, Mahta↗
NASA NTRS2000

Use of Geostationary Satellite Data to Force Land Surface Schemes within Atmospheric Mesoscale Models

A technique has been developed for assimilating GOES-derived skin temperature tendencies and insolation into the surface energy budget equation of a mesoscale model so that the simulated rate of temperature change closely agrees with the satellite observations. A critical assumption of the technique is that the availability of moisture (either from the soil or vegetation) is the least known term in the model's surface energy budget. Therefore, the simulated latent heat flux, which is a function of surface moisture availability, is adjusted based upon differences between the modeled and satellite-observed skin temperature tendencies. An advantage of this technique is that satellite temperature tendencies are assimilated in an energetically consistent manner that avoids energy imbalances and surface stability problems that arise from direct assimilation of surface shelter temperatures. The fact that the rate of change of the satellite skin temperature is used rather than the absolute temperature means that sensor calibration is not as critical. The technique has been employed on a semi-operational basis at the GHCC within the PSU/NCAR MM5. Assimilation has been performed on a grid centered over the Southeastern US since November 1998. Results from the past year show that assimilation of the satellite data reduces both the bias and RMSE for simulations of surface air temperature and relative humidity. These findings are based on comparison of assimilation runs with a control using the simple 5-layer soil model available in MM5. A significant development in the past several months was the inclusion of the detailed Oregon State University land surface model (OSU/LSM) as an option within MM5. One of our working hypotheses has been that the assimilation technique, although simple, may provide better short-term forecasts than a detailed LSM that requires significant number initialized parameters. Preliminary results indicate that the assimilation out performs the OSU/LSM as it is incorporated in MM5. Details will be presented at the symposium.

Lapenta, William M.↗
NASA NTRS1994

1993 Gordon Bell Prize Winners

The Gordon Bell Prize recognizes significant achievements in the application of supercomputers to scientific and engineering problems. In 1993, finalists were named for work in three categories: (1) Performance, which recognizes those who solved a real problem in the quickest elapsed time. (2) Price/performance, which encourages the development of cost-effective supercomputing. (3) Compiler-generated speedup, which measures how well compiler writers are facilitating the programming of parallel processors. The winners were announced November 17 at the Supercomputing 93 conference in Portland, Oregon. Gordon Bell, an independent consultant in Los Altos, California, is sponsoring $2,000 in prizes each year for 10 years to promote practical parallel processing research. This is the sixth year of the prize, which Computer administers. Something unprecedented in Gordon Bell Prize competition occurred this year: A computer manufacturer was singled out for recognition. Nine entries reporting results obtained on the Cray C90 were received, seven of the submissions orchestrated by Cray Research. Although none of these entries showed sufficiently high performance to win outright, the judges were impressed by the breadth of applications that ran well on this machine, all nine running at more than a third of the peak performance of the machine.

Karp, Alan H.↗
NASA NTRS1994

Extraction of Dry Leaf Spectral Features from Reflectance Spectra of Green Vegetation

Reflectance spectra of green vegetation in the 1.4-2.5 micrometer region are dominated by liquid water absorptions. In this article, we describe the analysis of a set of reflectance spectra of green vegetation, dry vegetation, and liquid water measured in a laboratory using a nonlinear least squares spectral matching technique. We conclude that both the liquid water and the dry materials contribute to the reflectance spectra of green vegetation in the 1.0-2.5 micrometer region. Our matching of data acquired with the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) over two vegetated areas in Oregon Transect with a pure water spectrum also shows a residual absorption feature near 1.72 micrometers.

Gao, Bo-Cai↗
NASA NTRS2001

STS-105 Flight Day 10 Highlights

On this tenth day of the STS-105 mission, footage shows the Leonardo Multipurpose Logistics Module packed and ready to return to Earth before it is grappled using the robotic arm and returned to the payload bay of Discovery. As the orbiter and the International Space Station fly over Earth, Florida is seen, as are Washington and Oregon (where the forest fires blaze), Lake Winnipeg, and the border between Ontario and Quebec.

Source record↗
NASA NTRS2001

Tunable Far Infrared Studies in Support of Stratospheric Measurements

This report summarizes research done under NASA Grant NAG5-4653. The research performed under this grant has been a collaboration between institutions including the Smithsonian Astrophysical Observatory, the National Institute of Standards and Technology, the University of Oregon, and the NASA Langley Research Center. The program has included fully line-resolved measurements of submillimeter and far infrared spectroscopic line parameters (pressure broadening coefficients and their temperature dependences, and line positions) for the analysis of field measurements of stratospheric constituents, far infrared database improvements, and studies for improved satellite measurements of the Earth's atmosphere. This research program is designed to enable the full utilization of spectra obtained in far infrared/submillimeter field measurements, such as FIRS-2, FILOS, IBEX, SLS, EosMLS, and proposed European Space Agency measurements of OH (e.g., PIRAMHYD and SFINX) for the retrieval of accurate stratospheric altitude profiles of key trace gases involved in ozone layer photochemistry. For the analysis of the spectra obtained in the stratosphere from far infrared measurements it is necessary to have accurate values of the molecular parameters (line positions, strengths, and pressure broadening coefficients) for the measured molecules and for possible interfering species. Knowledge of line positions is in increasingly good shape, with some notable exceptions. The increase in position information includes research that has been performed in the present program of research on HO2, H2O, H2O2, O3, HCl, HF, HBr, HI, CO, OH, and ClO. Examples where further line position studies are necessary include hot band and minor isotopomer lines of some of the major trace species (H2O, O3) and normal lines of some triatomic and larger molecules (NO2). Knowledge of strengths is in generally good shape, since most of the lines are from electric dipole transitions whose intensities are well determined from Stark effect measurements; exceptions include some molecules with large vibration-rotation interactions (NO2) and internal motions (H2O2 above the lowest torsional state). The line parameters that are still the least well determined are pressure broadening coefficients, and their temperature coefficients, These are strongly dependent on the quantum states involved in the transitions, in a way that is much more complex than the simple projection by directional cosine matrix elements involved in determination of rotational line strengths from static dipole moments. The following molecules have now been measured or detected in the atmosphere using far infrared and millimeter-wave emission spectroscopy from balloon- and satellite-borne spectrometers: OH, HO2, H2O (including minor isotopomers and hot band lines), H2O2, O3P, O2 (including minor isotopomers), O3 (including minor isotopomers and hot band lines), HOCl, HCl, HF, HBr, CIO, CO, CO2, N2O, NO2, N2O5, HNO3, ClNO3, and HCN. Many of these species have spectral lines that are saturated in stratospheric spectra. In these cases, the measured line equivalent widths are proportional to (line strength x Lorentz width) (exp 1/2) so that the pressure broadening coefficients are as important as the line intensities in determining concentration profiles. Interpretation of field measurements for these species have required ongoing measurement programs of pressure broadening measurements. Other species (HO2, HGCl, H2O2, HBr, and NO2, as examples) have required further line position studies in order to fully analyze the field measurements.

Chance, Kelly V.↗
NASA NTRS2001

Atmospheric and Spectroscopic Research in the Far Infrared

The University of Oregon (UO) was a participant in a number of far infrared spectroscopic projects over the past three decades. These include Sub-millimeter Infrared Balloon Experiment (SIBEX), the Balloon Intercomparison Campaign (BIC), and the Infrared Balloon Experiment (IBEX). In addition to these field studies, the UO program contained a detector research component and a laboratory spectroscopy element. Through a productive collaboration with Dr. Carli's group in Italy, with Prof. Ade's group in England and with Dr. Chance of Harvard-Smithsonian, we have made substantial contributions to the development of far infrared spectroscopy as a mature measurement technology for the atmospheric science. This report summarizes the activities during the latest grant period, covering the span from February 22, 1998 to February 21, 2002.

Park, Kwangjai↗
NASA NTRS2002

STS-105 Mission Highlights Resource Tape: Flight Days 7-9

A continuation of 'STS-105 Mission Highlights Resource Tape: Flight Days 1-3' (internal ID 2002046550) and 'STS-105 Mission Highlights Resource Tape: Flight Days 4-6' (internal ID 2002046549), this video shows footage from flight days seven through nine of the STS-105 mission. Mission Specialists Dan Barry and Pat Forrester are seen preparing for and performing their spacewalks, where they install an Early Ammonia Servicer on the International Space Station (ISS). The Expedition 2 crew (Commander Yuriy Usachev and Flight Engineers James Voss and Susan Helms) hands control of the ISS over to the Expedition 3 crew (Commander Frank Culbertson, Jr. and Flight Engineers Mikhail Turin and Vladimir Dezhurov) in a short ceremony. Barry and Forrester return to space the next day for another spacewalk to install handrails and heater cables. Hawaii is seen from space as ISS passes over, and the smoke from forest fires in Oregon and Idaho is shown. For footage from flight days 10-13, see 'STS-105 Mission Highlights Resource Tape: Flight Days 10-13' (internal ID 2002049551).

Source record↗
NASA NTRS1997

Comparative Modeling Studies of Boreal Water and Carbon Balance

The coordination of the modeling and field efforts for an Intensive Field Campaign (IFC) may resemble the chicken and egg dilemma. This session's theme advocates that early and proactive involvement by modeling teams can produce a scientific and operational benefit for the IFC and Experiment. This talk will provide some examples and suggestions originating from the NASA funded IFC's of the FIFE First ISLSCP (International Satellite Land Surface Climatology Project) Field Experiment, Oregon Transect Ecosystem Research (OTTER) and predominately Boreal Ecosystem-Atmosphere Study (BOREAS) Experiments. In February 1994 and prior to the final selection of the BOREAS study sites, a group of funded BOREAS investigators agreed to run their models with data for five community types representing the proposed tower flux sites. All participating models were given identical initial values and boundary conditions and driven with identical climate data. The objectives of the intercomparison exercise were: 1) compare simulation results of participating terrestrial, hydrological, and atmospheric models over selected time frames; 2) learn about model behavior and sensitivity to estimated boreal site and vegetation definitions; 3) prioritize BOREAS field data collection efforts supporting modeling studies; 4) identify individual model deficiencies as early as possible. Out of these objectives evolved some important coordination and science issues for the BOREAS Experiment that can be generalized to IFCs and long term archiving of the data. Some problems are acceptable because they are endemic to maintaining fair and open competition prior to the peer review process. Others are logistical and addressable through application of planning, management, and information sciences. This investigator has identified one source of measurement and model incompatibility that is manifest in the IFC scaling approach. Although intuitively obvious, scaling problems are already more formally defined in the Geography literature. An example of the scaling problem will be demonstrated with Vegetation/Ecosystem Mapping and Analysis Project (VEMAP) and OTTER data.

Coughlan, J.↗
NASA NTRS2002

Land Surface Data Assimilation and the Gulf Coast Sea-Breeze

A technique has been developed for assimilating GOES-derived skin temperature tendencies and insolation into the surface energy budget equation of a mesoscale model so that the simulated rate of temperature change closely agrees with the satellite observations. A critical assumption of the technique is that the availability of moisture (either from the soil or vegetation) is the least known term in the model's surface energy budget. Therefore, the simulated latent heat flux, which is a function of surface moisture availability, is adjusted based upon differences between the modeled and satellite observed skin temperature tendencies. An advantage of this technique is that satellite temperature tendencies are assimilated in an energetically consistent manner that avoids energy imbalances and surface stability problems that arise from direct assimilation of surface shelter temperatures. The fact that the rate of change of the satellite skin temperature is used rather than the absolute temperature means that sensor calibration is not as critical. The focus of this paper is to examine how the satellite assimilation technique impacts simulations of near-surface meteorology on the 4- to 48-hour time scale. The technique is implemented within the PSU/NCAR MM5 V34 and applied on a 36-km CONUS domain and a 12-km nest centered over Oklahoma. Two Friday periods during 2000 were selected for study, one during the warm season (May-June) and the other in the cold season (Nov-Dec). Bulk verification statistics (BIAS and RMSE) of surface air temperature and dewpoint show that the assimilation technique can improve numerical simulations on both regional and continental scales. Comparison of the simulated surface energy and water fluxes with observations from Energy Balance Bowen Ratio measurements taken at CART/ARM sites in the Southern Great Plains showed the assimilation technique produces a realistic argument of the Bowen ratio in both seasons. Additional runs with the Oregon State University land surface scheme as implemented within MM5 will be made and comparisons with assimilation results will be presented at the meeting.

Lapenta, William M.↗
NASA NTRS2003

Satellite Detection of Precipitation over the North Pacific

Intense extratropical winter cyclones often impact the West Coast of North America with strong winds and heavy precipitation. Several times during a winter season, short-term forecasts (24 - 48 hours) of these storms are seriously deficient with central pressure errors in the 10's of hPa and surface low position errors in the 100's of km. For example, 48-hr sea level pressure errors (forecast - observation) at buoy 46005 off the Oregon coast for the 2001 - 2002 winter season is plotted. In addition, two times the standard deviation (determined from pressure errors from the last four winter seasons) are also shown. It is evident from this figure that large forecast errors (i.e. greater than 10 hPa) occurred about 10 times this past winter at buoy 46005 with three events where the errors were 20 hPa. Beside large forecast errors of sea level pressure, numerical forecasts of precipitation for land falling cyclones can also be flawed. This is due in large part to the lack of accurate precipitation information over the ocean. Therefore, remote sensing techniques are the only viable option for obtaining accurate information on the distribution and intensity of precipitation over the North Pacific. Due to the radiative characteristics of precipitation sized hydrometeors at microwave frequencies, microwave sensors are able to detect precipitation over oceanic regions. Past studies have demonstrated the utility of passive microwave rainrate data for locating intense rainfall in rapidly deepening cyclones, in detecting developing polar mesocyclones and in determining frontal bands. There are currently many sources of microwave rainrate data: the Special Sensor Microwave Imager (SSM/I) (currently flying on three platforms), the Advanced Microwave Sounding Unit (AMSU-B) (currently flying on NOAA-15, NOAA-16, and NOAA-17), and the Tropical Rainfall Measuring Mission Microwave Imager (TMI). Data will soon be available from the Advanced Microwave Radiometer-EOS (AMSR-E) on the Aqua platform. In this paper, we present a new technique for mapping rainrate distributions over the North Pacific utilizing rainrate estimates from several microwave sensors and upper-tropospheric winds derived from geosynchronous satellite IR data. The goal of this work is to develop a way to obtain high temporal and spatial rainfall information over the North Pacific. This information will be used to support the verification of model derived precipitation distributions and to support the analysis of in situ measurements of rainfall during the Improvement of Microphysical Parameterization through Observational Verification Experiment (IMPROVE) field campaigns.

Smith, Jeremy↗
NASA NTRS2003

NASA Inverse Methods/Data Assimilation

An overview of NASA's Third International Summer School on Inverse Methods and Data Assimilation which was conducted at Oregon State University from July 22 to August 2, 2002, is presented. Items listed include: a roster of attendees, a description of course content and talks given.

Bennett, Andrew↗
NASA NTRS2003

Microgravity and Hypogravity Compatible Methods for the Destruction of Solid Wastes by Magnetically Assisted Gasification

This report summarizes a three-year collaborative effort between researchers at UMPQUA Research Company (URC) and the Chemical Engineering Department at Oregon State University (OSU). The Magnetically Assisted Gasification (MAG) concept was originally conceived as a microgravity and hypogravity compatible means for the decomposition of solid waste materials generated aboard spacecraft, lunar and planetary habitations, and for the recovery of potentially valuable resources. While a number of methods such as supercritical water oxidation (SCW0), fluidized bed incineration, pyrolysis , composting and related biological processes have been demonstrated for the decomposition of solid wastes, none of these methods are particularly well- suited for employment under microgravity or hypogravity conditions. For example, fluidized bed incineration relies upon a balance between drag forces which the flowing gas stream exerts upon the fluidization particles and the opposing force of gravity. In the absence of gravity, conventional fluidization cannot take place. Hypogravity operation can also be problematic for conventional fluidized bed reactors, because the various factors which govern fluidization phenomena do not all scale linearly with gravity. For this reason it may be difficult to design and test fluidized bed reactors in lg, which are intended to operate under different gravitational conditions. However, fluidization can be achieved in microgravity (and hypogravity) if a suitable replacement force to counteract the forces between fluid and particles can be found. Possible alternatives include: centripetal force, electric fields, or magnetic fields. Of these, magnetic forces created by the action of magnetic fields and magnetic field gradients upon ferromagnetic media offer the most practical approach. The goal of this URC-OSU collaborative effort was to develop magnetic hardware and methods to control the degree of fluidization (or conversely consolidation) of granular ferromagnetic media and to employ these innovations in sequential filtration and fluidized bed processes for the segregation and decomposition of solid waste materials, and for the concentration and collection of inorganic residue (ash). This required the development of numerous enabling technologies and tools.

Atwater, James E.↗
NASA NTRS2004

Parameterization of the Vertical Variability of Tropical Cirrus Cloud Microphysical and Optical Properties

Cloud Integrating Nephelometers (CIN) were flown on the U. North Dakota Citation aircraft and the NASA WB-57 aircraft for the purpose of measuring in-situ the optical extinction coefficient and the asymmetry parameter (g) at a wavelength of 635 nm of primarily ice particles encountered during the NASA CRYSTAL-FACE study of large cumulus clouds (Cu) and their anvils found in the southern Florida region. The probes performance was largely successful and produced archived data for vertical profiles of extinction, asymmetry parameter, and effective radius (Re), the latter being obtained by combining CIN and CVI (total water; Oregon State U.) measurements. Composites of the CIN and CVI data describing the average microphysical and optical behavior of the Cu and their anvils showed the following: The extinction increases with height as a result of the size of the particles also decreasing with height as shown by the Re measurements; near the top of anvils the size of the primary ice particles is about 10-um radius; and the value of g does not vary significantly with height and has a mean value of about 0.73 consistent with the idea that ambient ice crystals are primarily of complex shape and reflect solar radiation more efficiently than particles of pristine crystal shape. Other observations include: The g measurements were found to be an indicator of the phase of the cloud permitting identification of the clouds with water droplets, rain, and ice; visual ranges as small as several tens of meters were occasionally found in "extinction cores" that coincided with strong updraft cores; and comparison of the cloud probes on the Citation showed significant disagreement.

Gerber, Hermann E.↗
NASA NTRS2004

The GLOBE Earth Day 2004 Contrail Count-a-Thon

Early in 2004 the GLOBE Science team suggested a contrail count activity to celebrate Earth Day 2004, which was held this year on April 22nd in the United States and some other countries around the world. The GLOBE contrail team embraced this idea and developed a simplified data collection sheet for this special project. Information about the event was shared through the GLOBE site, UCAR and NASA press releases, the NASA portal (http://www.nasa.gov) and the CERES S'COOL Project (http://scool.larc.nasa.gov). On Earth Day, about 120 observations were received through the GLOBE Contrail Count-a-Thon website, about 70 contrail observations were received through regular GLOBE data reporting, and 19 contrail observations were received through regular S'COOL data reporting. Only observations between 11:00 and 13:00 local time were included in the Count-a-Thon. The event was reported in the Boulder Daily Camera beforehand and in the Oregon Register-Guard after the fact. It was also reported on National Public Radio s Day-to-Day show; whose host even submitted an observation. This poster discusses the Count-a-Thon experience and reports the results.

Chambers, Lin H.↗
NASA NTRS2004

Monitoring the Mesoamerican Biological Corridor: A NASA/CCAD Cooperative Research Project

To foster scientific cooperation under a Memorandum of Understanding between NASA and the Central American countries, the research project developed regional databases to monitor forest condition and environmental change throughout the region. Of particular interest is the Mesoamerican Biological Corridor (MBC), a chain of protected areas and proposed conservation areas that will link segments of natural habitats in Central America from the borders of northern Columbia to southern Mexico. The first and second year of the project focused on the development of regional satellite databases (JERS-IC, MODIS, and Landsat-TM), training of Central American cooperators and forest cover and change analysis. The three regional satellite mosaics were developed and distributed on CD-ROM to cooperators and regional outlets. Four regional remote sensing training courses were conducted in 3 countries including participants from all 7 Central American countries and Mexico. In year 3, regional forest change assessment in reference to Mesoamerican Biological Corridor was completed and land cover maps (from Landsat TM) were developed for 7 Landsat scenes and accuracy assessed. These maps are being used to support validation of MODIS forest/non forest maps and to examine forest fragmentation and forest cover change in selected study sites. A no-cost time extension (2003-2004) allowed the completion of an M.S. thesis by a Costa Rican student and preparation of manuscripts for future submission to peer-reviewed outlets. Proposals initiated at the end of the project have generated external funding from the U.S. Forest Service (to U. Maine), NASA-ESSF (Oregon State U.) and from USAID and EPA (to NASA-MSFC-GHCC) to test MODIS capabilities to detect forest change; conduct literature review on biomass estimation and carbon stocks and develop a regional remote sensing monitoring center in Central America. The success of the project has led to continued cooperation between NASA, other federal agencies, and scientists from all seven Central American Countries (see SERVIR web site for this ongoing work - servir.nsstc.nasa.gov).

Sever, Thomas↗
NASA NTRS2001

Ecological physiology of Synechococcus sp. strain SH-94-5, a naturally occurring cyanobacterium deficient in nitrate assimilation

Synechococcus sp. strain SH-94-5 is a nitrate assimilation-deficient cyanobacterium which was isolated from an ammonium-replete hot spring in central Oregon. While this clone could grow on ammonium and some forms of organic nitrogen as sole nitrogen sources, it could not grow on either nitrate or nitrite, even under conditions favoring passive diffusion. It was determined that this clone does not express functional nitrate reductase or nitrite reductase and that the lack of activity of either enzyme is not due to inactivation of the cyanobacterial nitrogen control protein NtcA. A few other naturally occurring cyanobacterial strains are also nitrate assimilation deficient, and phylogenetic analyses indicated that the ability to utilize nitrate has been independently lost at least four times during the evolutionary history of the cyanobacteria. This phenotype is associated with the presence of environmental ammonium, a negative regulator of nitrate assimilation gene expression, which may indicate that natural selection to maintain functional copies of nitrate assimilation genes has been relaxed in these habitats. These results suggest how the evolutionary fates of conditionally expressed genes might differ between environments and thereby effect ecological divergence and biogeographical structure in the microbial world.

Nitrates/metabolism↗