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At least 469 records · Page 26

Fourier-DeepONet: Fourier-enhanced deep operator networks for full waveform inversion with improved accuracy, generalizability, and robustness

In this article, full waveform inversion (FWI) infers the subsurface structure information from seismic waveform data by solving a non-convex optimization problem. Data-driven FWI has been increasingly studied with various neural network architectures to improve accuracy and computational efficiency. Nevertheless, the applicability of pre-trained neural networks is severely restricted by potential discrepancies between the source function used in the field survey and the one utilized during training. Here, we develop a Fourier-enhanced deep operator network (Fourier-DeepONet) for FWI with the generalization of seismic sources, including the frequencies and locations of sources. Specifically, we employ the Fourier neural operator as the decoder of DeepONet, and we utilize source parameters as one input of Fourier-DeepONet, facilitating the resolution of FWI with variable sources. To test Fourier-DeepONet, we develop three new and realistic FWI benchmark datasets (FWI-F, FWI-L, and FWI-FL) with varying source frequencies, locations, or both. Our experiments demonstrate that compared with existing data-driven FWI methods, Fourier-DeepONet obtains more accurate predictions of subsurface structures in a wide range of source parameters. Moreover, the proposed Fourier-DeepONet exhibits superior robustness when handling data with Gaussian noise or missing traces and sources with Gaussian noise, paving the way for more reliable and accurate subsurface imaging across diverse real conditions.

42 ENGINEERING↗

Inferring protein expression changes from mRNA in Alzheimer’s dementia using deep neural networks

Identifying the molecular systems and proteins that modify the progression of Alzheimer’s disease and related dementias (ADRD) is central to drug target selection. However, discordance between mRNA and protein abundance, and the scarcity of proteomic data, has limited our ability to advance candidate targets that are mainly based on gene expression. Therefore, by using a deep neural network that predicts protein abundance from mRNA expression, here we attempt to track the early protein drivers of ADRD. Specifically, by applying the clei2block deep learning model to 1192 brain RNA-seq samples, we identify protein modules and disease-associated expression changes that were not directly observed at the mRNA level. Moreover, pseudo-temporal trajectory inference based on the predicted proteome became more closely correlated with cognitive decline and hippocampal atrophy compared to RNA-based trajectories. This suggests that the predicted changes in protein expression could provide a better molecular representation of ADRD progression. Furthermore, overlaying clinical traits on protein pseudotime trajectory identifies protein modules altered before cognitive impairment. These results demonstrate how our method can be used to identify potential early protein drivers and possible drug targets for treating and/or preventing ADRD.

60 APPLIED LIFE SCIENCES↗

Simultaneous energy and mass calibration of large-radius jets with the ATLAS detector using a deep neural network

The energy and mass measurements of jets are crucial tasks for the Large Hadron Collider experiments. This paper presents a new calibration method to simultaneously calibrate these quantities for large-radius jets measured with the ATLAS detector using a deep neural network (DNN). To address the specificities of the calibration problem, special loss functions and training procedures are employed, and a complex network architecture, which includes feature annotation and residual connection layers, is used. The DNN-based calibration is compared to the standard numerical approach in an extensive series of tests. The DNN approach is found to perform significantly better in almost all of the tests and over most of the relevant kinematic phase space. In particular, it consistently improves the energy and mass resolutions, with a 30% better energy resolution obtained for transverse momenta $p$ T > $500$ GeV.

47 OTHER INSTRUMENTATION↗

Accelerating Finite-temperature Kohn-Sham Density Functional Theory\ with Deep Neural Networks

We present a numerical modeling workflow based on machine learning (ML) which reproduces the the total energies produced by Kohn-Sham density functional theory (DFT) at finite electronic temperature to within chemical accuracy at negligible computational cost. Based on deep neural networks, our workflow yields the local density of states (LDOS) for a given atomic configuration. From the LDOS, spatially-resolved, energy-resolved, and integrated quantities can be calculated, including the DFT total free energy, which serves as the Born-Oppenheimer potential energy surface for the atoms. We demonstrate the efficacy of this approach for both solid and liquid metals and compare results between independent and unified machine-learning models for solid and liquid aluminum. Our machine-learning density functional theory framework opens up the path towards multiscale materials modeling for matter under ambient and extreme conditions at a computational scale and cost that is unattainable with current algorithms.

36 MATERIALS SCIENCE↗

Astrometric results of 1978-1985 Deep Space Network radio interferometry - The JPL 1987-1 extragalactic source catalog

An astrometric radio reference frame has been determined from intercontinental dual-frequency radio interferometric measurements. These measurements were carried out on a regular basis during 1978-1985 between NASA's Deep Space Network stations in California, Spain, and Australia. Analysis of 6800 pairs of delay and delay-rate observations made during 51 sessions produced estimates of 1300 parameters. The most significant of these are geophysical quantities and positions of extragalactic sources. The source catalog resulting from this analysis includes 106 sources fairly uniformly distributed over the celestial sphere, north of -45 deg declination. Almost all of the resulting source positions have formal uncertainties between 0.5 and 3 milliarcseconds (mas), with rms values of 2 mas in both angular coordinates. Internal consistency checks, as well as comparisons with independently determined source catalogs of comparable quality, indicate that relative source coordinates determined by VLBI contain systematic errors at the level of 1 to 2 mas.

Sovers, O. J.↗

Spatio-Temporal Deep Graph Network for Event Detection, Localization, and Classification in Cyber-Physical Electric Distribution System

This work proposes a deep graph learning framework to identify, locate, and classify power, cyber, and cyber power events at the distribution system level. The proposed algorithm jointly exploits spatial, temporal, and node-level cyber and physical data features. The developed graph neural network, together with a deep autoencoder, utilizes physical measurements from distribution level phasor measurement units and cyber data from communication network logs. The spatial structure of the synchrophasor measurements and network is incorporated through a weighted adjacency matrix. The temporal structure is incorporated by defining a spatial operation in the gated recurrent unit. This spatio-temporal learning element resides inside a power event detection, localization, and classification module that provides the degree of confidence for an event label. To accurately pinpoint the location of an event to the nearest bus equipped with a measurement unit, a combination of squared error and proximity score is utilized. Also included is a cyber event detection module that employs heteroskedasticity to analyze the significance of various cyber features during different types of attacks. Finally, a dual-bit cyber-power decision table determines the nature of the event. The proposed method is validated on two distribution systems modeled in OPAL-RT/Hypersim with limited phasor measurement units for different possible physical and cyber events. Further analyses include comparison with other state-of-the-art methods and validation in the presence of measurement noise. As a result, our method outperforms existing approaches and achieves an average detection accuracy of 97.97%, F1-score of 96.88%, precision of 96.53%, and recall of 98.57%.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Microwave analog fiber-optic link for use in the deep space network

A novel fiber-optic system with dynamic range of up to 150 dB-Hz for transmission of microwave analog signals is described. The design, analysis, and laboratory evaluations of this system are reported, and potential applications in the NASA/JPL Deep Space Network are discussed.

Logan, R. T., Jr.↗

Automated Pneumothorax Diagnosis using Deep Neural Networks

Thoracic ultrasound can provide information leading to rapid diagnosis of pneumothorax with improved accuracy over the standard physical examination and with higher sensitivity than anteroposterior chest radiography. However, the clinical We have Furthermore, remote environments, such as the battlefield or deep-space exploration, may lack expertise for diagnosing developed an automated image interpretation pipeline for the analysis of thoracic ultrasound data and the classification of pneumothorax events to provide decision support in such situations. Our pipeline consists of image preprocessing, data augmentation, and deep learning architectures for medical diagnosis. In this work, we demonstrate that robust, accurate interpretation of chest images and video can be achieved using deep neural networks. A number of novel image processing techniques were employed to achieve this result. Affine transformations were applied for data augmentation. Hyperparameters were optimized for learning rate, dropout regularization, batch size, and epoch iteration by a sequential model-based Bayesian approach. In addition, we utilized pretrained architecturesinterpretation of a patient medical image is highly operator dependent. certain pathologies., applying transfer learning and fine-tuning techniques to fully connected layers. Our pipeline yielded binary classification validation accuracies of 98.3% for M-mode images and 99.8% with B-mode video frames.

US Army collaboration↗

Current Applications of Analog Fiber Optics in the NASA/JPL Deep Space Network

Analog fiber optic technology. Enables a fully integrated Deep Space Communications complex. Enables sharing of expensive subsystems. Enables RF carrier arraying of antennas separated by tens of kilometers. Provides improved complex reliability and flexibility. Enables improved performance. Provides significant cost reductions.

DSN Goldstone Deep Space Communications fiber opti↗

Epistatic Net allows the sparse spectral regularization of deep neural networks for inferring fitness functions

Abstract Despite recent advances in high-throughput combinatorial mutagenesis assays, the number of labeled sequences available to predict molecular functions has remained small for the vastness of the sequence space combined with the ruggedness of many fitness functions. While deep neural networks (DNNs) can capture high-order epistatic interactions among the mutational sites, they tend to overfit to the small number of labeled sequences available for training. Here, we developed Epistatic Net (EN), a method for spectral regularization of DNNs that exploits evidence that epistatic interactions in many fitness functions are sparse. We built a scalable extension of EN, usable for larger sequences, which enables spectral regularization using fast sparse recovery algorithms informed by coding theory. Results on several biological landscapes show that EN consistently improves the prediction accuracy of DNNs and enables them to outperform competing models which assume other priors. EN estimates the higher-order epistatic interactions of DNNs trained on massive sequence spaces-a computational problem that otherwise takes years to solve.

Aghazadeh, Amirali (ORCID:0000000302230873)↗

Structure of disordered TiO 2 phases from ab initio based deep neural network simulations

Amorphous TiO 2 (a-TiO 2 ) is widely used in many fields, ranging from photo-electrochemistry to bio-engineering, hence detailed knowledge of its atomic structure is of scientific and technological interest. Here we use an ab initio-based deep neural network potential (DP) to simulate large scale atomic models of crystalline and disordered TiO 2 with molecular dynamics. Our DP reproduces the structural properties of all (11) TiO 2 crystalline phases, predicts the densities and structure factors of molten and amorphous TiO 2 with only a few percent deviation from experiments, and describes the pressure dependence of the amorphous structure in agreement with recent observations. Furthermore, it can be extended to model additional structures and compositions and can be thus of great value in the study of TiO 2 -based (nano-)materials.

36 MATERIALS SCIENCE↗

Radio interferometric determination of intercontinental baselines and earth orientation utilizing deep space network antennas - 1971 to 1980

Progress has been made toward the realization of the potential of radio interferometry for measuring crustal motions and global rotations of the earth with accuracies at the centimeter level. In this connection, a series of experiments, primarily with NASA's Deep Space Network (DSN) antennas, has been conducted to develop two generations of very long baseline interferometric (VLBI) systems. A description is presented of the employed techniques, an analysis of the experiments, and the results of geophysical significance. Attention is given to the interferometry technique, the geometric delay model, propagation media calibrations, and the observing strategy.

Sovers, O. J.↗

Condensed Phase Water Molecular Multipole Moments from Deep Neural Network Models Trained on Ab Initio Simulation Data

Ionic solvation phenomena in liquids involve intense interactions in the inner solvation shell. For interactions beyond the first shell, the ion–solvent interaction energies result from the sum of many smaller-magnitude contributions that can still include polarization effects. Deep neural network (DNN) methods have recently found wide application in developing efficient molecular models that maintain near-quantum accuracy. In this work, we extend the DeePMD-kit code to produce accurate molecular multipole moments in the bulk and near interfaces. The new method is validated by comparing the DNN moments with those generated by ab initio simulations. The moments are used to compute the electrostatic potential at the center of a molecular-sized hydrophobic cavity in water. The results show that the fields produced by the DNN models are in quantitative agreement with the AIMD-derived values. These efficient methods will open the door to more accurate solvation models for large solutes such as proteins.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Cryogenic, low-noise high electron mobility transistor amplifiers for the Deep Space Network

The rapid advances recently achieved by cryogenically cooled high electron mobility transistor (HEMT) low-noise amplifiers (LNA's) in the 1- to 10-GHz range are making them extremely competitive with maser amplifiers. In order to address future spacecraft navigation, telemetry, radar, and radio science needs, the Deep Space Network is investing both maser and HEMT amplifiers for its Ka-band (32-GHz) downlink capability. This article describes the current state cryogenic HEMT LNA development at Ka-band for the DSN. Noise performance results at S-band (2.3 GHz) and X-band (8.5 GHz) for HEMT's and masers are included for completeness.

Bautista, J. J.↗

Comparison of Atmospheric Delay Statistics from Deep Space Network Arrays and Nearby Test Interferometers

Several techniques have been explored and demonstrated that allow for greater data return on space-to-ground links. Among these techniques, arraying several smaller diameter dish antennas together is one method used in several arenas. These arrays can achieve larger effective area and gain than are available from a single larger antenna. This technique is routinely used by the NASA Deep Space Network (DSN) at 8.4 GHz where the incoming signals are much weaker than those experienced by the near-Earth satellite community. When considering arraying at much higher frequencies such as 32 GHz deep-space Ka-band, the phase alignment of the individual antenna signals is significantly disrupted by atmospheric turbulence. Since 2012, several downlink array demonstrations have been conducted using 32 GHz carrier signals emitted by the deep space probes Cassini and Kepler. Site test interferometers (STIs) that receive signals from geostationary satellites have been deployed at all three DSN tracking complexes for long-term monitoring of atmospheric delay fluctuations. In a previous DSN array demonstration study involving the Cassini spacecraft, it was shown that statistics of the adjusted STI phase fluctuations matched the statistics of concurrent array demonstration phase fluctuations. These adjustments accounted for differences in antenna separation, elevation angle and spacecraft frequencies. The STI antenna separations were about 200 m and the DSN antenna separations were about 300 m. These adjustments made use of the thick-layer turbulence model that was applicable to the Goldstone desert climate during the summer months for which the data were acquired. In this paper, we report on the results of additional array demonstrations involving the Kepler spacecraft and compare the adjusted STI phase fluctuations with those seen by a nearby two-element array of 34 m diameter antennas tracking Kepler’s 32 GHz signal at the Goldstone, California and Madrid, Spain DSN sites. We also discuss results from a demonstration using an array over a longer 12.5 km baseline. The Cassini and Kepler array demonstrations were found to validate the long term statistics acquired from several years of STI data as well as the models used to adjust the statistics for the conditions of an array. These statistics represent reliable estimates of the phase fluctuations that would be seen by an array tracking a deep space signal after applying appropriate adjustments for a given array configuration, elevation angle profile and observing frequency.

Morabito, David D.↗