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At least 469 records · Page 26

Parallel Directionally Split Solver Based on Reformulation of Pipelined Thomas Algorithm

In this research an efficient parallel algorithm for 3-D directionally split problems is developed. The proposed algorithm is based on a reformulated version of the pipelined Thomas algorithm that starts the backward step computations immediately after the completion of the forward step computations for the first portion of lines This algorithm has data available for other computational tasks while processors are idle from the Thomas algorithm. The proposed 3-D directionally split solver is based on the static scheduling of processors where local and non-local, data-dependent and data-independent computations are scheduled while processors are idle. A theoretical model of parallelization efficiency is used to define optimal parameters of the algorithm, to show an asymptotic parallelization penalty and to obtain an optimal cover of a global domain with subdomains. It is shown by computational experiments and by the theoretical model that the proposed algorithm reduces the parallelization penalty about two times over the basic algorithm for the range of the number of processors (subdomains) considered and the number of grid nodes per subdomain.

Povitsky, A.↗

Upgrade Summer Severe Weather Tool in MIDDS

The goal of this task was to upgrade the severe weather database from the previous phase by adding weather observations from the years 2004 - 2009, re-analyze the data to determine the important parameters, make adjustments to the index weights depending on the analysis results, and update the MIDDS GUI. The added data increased the period of record from 15 to 21 years. Data sources included local forecast rules, archived sounding data, surface and upper air maps, and two severe weather event databases covering east-central Florida. Four of the stability indices showed increased severe weather predication. The Total Threat Score (TTS) of the previous work was verified for the warm season of 2009 with very good skill. The TTS Probability of Detection (POD) was 88% and the False alarm rate (FAR) of 8%. Based on the results of the analyses, the MIDDS Severe Weather Worksheet GUI was updated to assist the duty forecaster by providing a level of objective guidance based on the analysis of the stability parameters and synoptic-scale dynamics.

Wheeler, Mark M.↗

BioNet Digital Communications Framework

BioNet v2 is a peer-to-peer middleware that enables digital communication devices to talk to each other. It provides a software development framework, standardized application, network-transparent device integration services, a flexible messaging model, and network communications for distributed applications. BioNet is an implementation of the Constellation Program Command, Control, Communications and Information (C3I) Interoperability specification, given in CxP 70022-01. The system architecture provides the necessary infrastructure for the integration of heterogeneous wired and wireless sensing and control devices into a unified data system with a standardized application interface, providing plug-and-play operation for hardware and software systems. BioNet v2 features a naming schema for mobility and coarse-grained localization information, data normalization within a network-transparent device driver framework, enabling of network communications to non-IP devices, and fine-grained application control of data subscription band width usage. BioNet directly integrates Disruption Tolerant Networking (DTN) as a communications technology, enabling networked communications with assets that are only intermittently connected including orbiting relay satellites and planetary rover vehicles.

Gifford, Kevin↗

Realistic Geochemical Parameter Uncertainty for Performance Assessment Modeling - 17066

Performance assessments (PAs) include uncertain geochemical parameters that affect the fate and transport of contaminants in environmental media, such as partitioning coefficients for water/rock (K{sub d}) and water/air (K{sub H}), diffusion coefficients, and aqueous solubilities. A statistical approach to realistic, as opposed to 'conservative,' stochastic distribution development for geochemical parameters is presented here. For contaminants not identified as focus elements during screening, broad generic distributions are developed. If any parameter is flagged in the subsequent model sensitivity analysis (SA), it becomes a focus element for further research during the next round of distribution development. This iterative approach is efficient and technically defensible at each stage. Data are collected in databases and may be appropriately weighted or filtered. In the relatively few cases where data exist from local or analogous rocks, those data may be prioritized. Once established, the databases can be used for future PAs or other environmental models and can be expanded as needed based on model SA results, additional screening, and as additional relevant data become available. The iterative method is demonstrated for K{sub d} and K{sub H} in a PA model for a radioactive waste disposal facility. An SA was performed based on preliminary geochemical parameter distributions that showed certain model endpoints are sensitive to K{sub d} and K{sub H} values for some contaminants. This underscores the importance of including realistic uncertainty in these geochemical parameters. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

The High-resolution Urban Meteorology for Impacts Dataset (HUMID) daily for the Conterminous United States

Many current gridded surface meteorological datasets are inadequate for quantifying near surface spatiotemporal variability because they do not fully represent the impacts of land surface heterogeneity. Of note, explicit representation of the spatial structure and magnitude of local urban warming are usually lacking. Here we enhance the representation of spatial meteorological variability over urban areas in the conterminous United States (CONUS) by employing the High-Resolution Land Data Assimilation System (HRLDAS), which accounts for the fine-scale impacts of spatiotemporally varying land surfaces on weather. We also synthesize in situ meteorological data including local mesonets to create a 1 km grid spacing model-observation fusion product spanning 1981-2018 over the CONUS. Daily maximum, minimum, and mean values for a variety of temperature estimates, humidity, and surface energy budget terms, among others, are included. This High-resolution Urban Meteorology for Impacts Dataset (HUMID) will be useful for studies examining spatial variability of near surface meteorology and the impacts of urban heat islands across many disciplines including epidemiology, ecology, and climatology.

54 ENVIRONMENTAL SCIENCES↗

Atmospheric correction of LANDSAT TM thermal band using surface energy balance

Thermal infrared data of LANDSAT Thematic Mapper (TM) are hardly used, probably due to the difficulties met when trying to correct them for atmospheric effects. A method for correcting these data was designed, based on surface energy balance estimation of known wet and dry targets included in the TM image to be corrected. This method, only using the image itself and local meteorological data was tested and validated on various surfaces: agricultural, forest and rangeland. The root mean square error on corrected temperatures is on the order of 1C.

Vidal, Alain↗

Mars Radar Observations with the Goldstone Solar System Radar

The Goldstone Solar System Radar (GSSR) has successfully collected radar echo data from Mars over the past 30 years. As such, the GSSR has played a role as a specific mission element within Mars exploration. The older data provided local elevation information for Mars, along with radar scattering information with global resolution. Since the upgrade to the 70-m Deep Space Network (DSN) antenna at Goldstone completed in 1986, Mars data has been collected during all but the 1997 Mars opposition. Radar data, and non-imaging delay-Doppler data in particular, requires significant data processing to extract elevation, reflectivity and roughness of the reflecting surface. The spatial resolution of these experiments is typically some 20 km in longitude by some 150 km in latitude. The interpretation of these parameters while limited by the complexities of electromagnetic scattering, do provide information directly relevant to geophysical and geomorphic analyses of Mars. The usefulness of radar data for Mars exploration has been demonstrated in the past. Radar data were critical in assessing the Viking Lander 1 site as well as, more recently, the Pathfinder landing site. In general, radar data have not been available to the Mars exploration community at large. A project funded initially by the Mars Exploration Directorate Science Office at the Jet Propulsion Laboratory (JPL), and later funded by NASA's Mars Data Analysis Program has reprocessed to a common format a decade's worth of raw GSSR Mars delay-Doppler data in aid of landing site characterization for the Mars Program. These data will soon be submitted to the Planetary Data System (PDS). The radar data used were obtained between 1988 and 1995 by the GSSR, and comprise some 63 delay-Doppler radar tracks. Of these, 15 have yet to be recovered from old 9-track tapes, and some of the data may be permanently lost.

Haldemann, A. F. C.↗

Combining biomarker and virus phylogenetic models improves HIV-1 epidemiological source identification

To identify and stop active HIV transmission chains new epidemiological techniques are needed. Here, we describe the development of a multi-biomarker augmentation to phylogenetic inference of the underlying transmission history in a local population. HIV biomarkers are measurable biological quantities that have some relationship to the amount of time someone has been infected with HIV. To train our model, we used five biomarkers based on real data from serological assays, HIV sequence data, and target cell counts in longitudinally followed, untreated patients with known infection times. The biomarkers were modeled with a mixed effects framework to allow for patient specific variation and general trends, and fit to patient data using Markov Chain Monte Carlo (MCMC) methods. Subsequently, the density of the unobserved infection time conditional on observed biomarkers were obtained by integrating out the random effects from the model fit. This probabilistic information about infection times was incorporated into the likelihood function for the transmission history and phylogenetic tree reconstruction, informed by the HIV sequence data. To critically test our methodology, we developed a coalescent-based simulation framework that generates phylogenies and biomarkers given a specific or general transmission history. Testing on many epidemiological scenarios showed that biomarker augmented phylogenetics can reach 90% accuracy under idealized situations. Under realistic within-host HIV-1 evolution, involving substantial within-host diversification and frequent transmission of multiple lineages, the average accuracy was at about 50% in transmission clusters involving 5–50 hosts. Realistic biomarker data added on average 16 percentage points over using the phylogeny alone. Using more biomarkers improved the performance. Shorter temporal spacing between transmission events and increased transmission heterogeneity reduced reconstruction accuracy, but larger clusters were not harder to get right. More sequence data per infected host also improved accuracy. We show that the method is robust to incomplete sampling and that adding biomarkers improves reconstructions of real HIV-1 transmission histories. The technology presented here could allow for better prevention programs by providing data for locally informed and tailored strategies.

60 APPLIED LIFE SCIENCES↗

Boundary Layer Transition Results From STS-114

The tool for predicting the onset of boundary layer transition from damage to and/or repair of the thermal protection system developed in support of Shuttle Return to Flight is compared to the STS-114 flight results. The Boundary Layer Transition (BLT) Tool is part of a suite of tools that analyze the aerothermodynamic environment of the local thermal protection system to allow informed disposition of damage for making recommendations to fly as is or to repair. Using mission specific trajectory information and details of each damage site or repair, the expected time of transition onset is predicted to help determine the proper aerothermodynamic environment to use in the subsequent thermal and stress analysis of the local structure. The boundary layer transition criteria utilized for the tool was developed from ground-based measurements to account for the effect of both protuberances and cavities and has been calibrated against flight data. Computed local boundary layer edge conditions provided the means to correlate the experimental results and then to extrapolate to flight. During STS-114, the BLT Tool was utilized and was part of the decision making process to perform an extravehicular activity to remove the large gap fillers. The role of the BLT Tool during this mission, along with the supporting information that was acquired for the on-orbit analysis, is reviewed. Once the large gap fillers were removed, all remaining damage sites were cleared for reentry as is. Post-flight analysis of the transition onset time revealed excellent agreement with BLT Tool predictions.

Berry, Scott A.↗

Atmospheric Variability and Measurement Uncertainty: Pitfalls in Averaging in situ Data

Satellite measurements and atmospheric models, two essential components of the integrated global observing system, provide crucial tools for monitoring and predicting regional and global foci, spanning numerous Earth Science fields. Unfortunately, models can lack the spatial and temporal resolution needed to resolve finer scale structure. Satellite measurements also have similar tempo-spatial restriction issues, but additionally can only measure certain species and can have biases that must be evaluated. Ground measurement networks are critical components of this system, by providing both independent inputs of species needed by models (including those that satellites do not provide) and assisting with investigation of biases in satellite products. Similarly, aircraft measurements play a vital role in closing the gaps between satellite measurements, model products, and ground monitoring networks by providing high accuracy, high-resolution data on local to regional spatial scales. Therefore, both ground-based and airborne observations are widely used to assess model predictions and satellite observations. One of the great challenges in using both ground and aircraft data in this fashion is matching the data temporally and spatially to the model/satellite data. A meaningful comparison with model or satellite requires a solid assessment of the variability of the in-situ measurements, which include both the instrument uncertainty and the statistical uncertainty due to atmospheric variability. While instrument uncertainty is generally more straightforwardly characterized, it can be challenging to accurately capture this variability uncertainty as it often presents in a non-Gaussian manner (e.g. emission plumes, frontal passages). We will present results examining spatial and temporal variability over a selection of scales relevant to satellite measurements and models of several in situ measurement species spanning both airborne and ground measurements. The extent of non-Gaussian variability will be quantified, and we will discuss additional statistical parameters that help assess the fitness of gaussian variability assumption when temporally or spatially averaging.

satellite validation↗

Wavelength division multiplexing

Wavelength division multiplexing (WDM) represents an approach for expanding the communication capacity and for implementing special data techniques in a fiber optics system. This technology is implemented by adding optical sources of different wavelengths at optical transmitting locations. The present paper is concerned with some of the current efforts in WDM. WDM applications are related to long haul communications, local area data networks, spacecraft and aircraft data systems, fault tolerant computer networks, special sensor devices, high speed data processors, closed circuit and cable television, and submarine cable systems. Attention is given to the current state of wavelength division multiplexing applications, the availability and status of WDM components semiconductor lasers/transmitters, availability and status of fiber optic detectors/receivers, optical fibers/cables/connectors/taps/star couplers, wavelength multiplexers/demultiplexers, and future WDM for local area networks.

Hendricks, H. D.↗

How AI Predicts the Untrained and Unseen

Focus Area: Model predictability improvements (Primary); Data optimization (secondary); Data complexity insights (secondary). The Scientific Challenge: If we believe that a future under extreme conditions will look very differently from today, we can likely agree that ML/AI models trained on past and present datasets will not be adequate to make reliable predictions into the future. This is true for water cycling, as well as biogeochemistry and other Earth system components and behaviors. Additionally, ML/AI models are inherently non-physical. Despite the flourishing success of ML/AI in many applications, such as computer vision, natural language process, and gaming, even the most sophisticated AI models don’t understand the very basic physical laws. Therefore, a natural question is: Can we trust ML/AI based predictions of Earth system behaviors that are fundamentally driven by physical laws? So, are physics models with meticulous process representation a better choice? Not exactly. Physical models, when firmly rooted in first principles, work great at predicting behaviors of systems with a well-defined set of boundary conditions and variables. However, as a complex system, the number of parameters and the degree of complexity and dynamics in processes, coupling, and scale dependent emergent behaviors make the Earth system behaviors very challenging to predict with physical models composed of deterministic laws. In addition, due to the lack of fundamental understandings, physical models often implement empirical correlations derived from observations with biases from locality of data generation. Because correlation is not necessarily causation or comply with first principles, scaling of model predictions beyond locality is often invalid. Beyond the limitation of models, physics or AI, our knowledge of the Earth system is limited by the lack of observational technologies and resources. Insufficient data density, dimensionality and diversity only offer a sliced (or projected) view of the Earth system, e.g. Plato’s Cave analogy, limiting our capability to better understand and represent fundamental processes in models.

54 ENVIRONMENTAL SCIENCES↗

Experimental evaluation of certification trails using abstract data type validation

Certification trails are a recently introduced and promising approach to fault-detection and fault-tolerance. Recent experimental work reveals many cases in which a certification-trail approach allows for significantly faster program execution time than a basic time-redundancy approach. Algorithms for answer-validation of abstract data types allow a certification trail approach to be used for a wide variety of problems. An attempt to assess the performance of algorithms utilizing certification trails on abstract data types is reported. Specifically, this method was applied to the following problems: heapsort, Hullman tree, shortest path, and skyline. Previous results used certification trails specific to a particular problem and implementation. The approach allows certification trails to be localized to 'data structure modules,' making the use of this technique transparent to the user of such modules.

Wilson, Dwight S.↗

Overview of Boundary Layer Transition Research in Support of Orbiter Return To Flight

A predictive tool for estimating the onset of boundary layer transition resulting from damage to and/or repair of the thermal protection system was developed in support of Shuttle Return to Flight. The boundary layer transition tool is part of a suite of tools that analyze the aerothermodynamic environment to the local thermal protection system to allow informed disposition of damage for making recommendations to fly as is or to repair. Using mission specific trajectory information and details of each damage site or repair, the expected time (and thus Mach number) at transition onset is predicted to help define the aerothermodynamic environment to use in the subsequent thermal and stress analysis of the local thermal protection system and structure. The boundary layer transition criteria utilized for the tool was developed from ground-based measurements to account for the effect of both protuberances and cavities and has been calibrated against select flight data. Computed local boundary layer edge conditions were used to correlate the results, specifically the momentum thickness Reynolds number over the edge Mach number and the boundary layer thickness. For the initial Return to Flight mission, STS-114, empirical curve coefficients of 27, 100, and 900 were selected to predict transition onset for protuberances based on height, and cavities based on depth and length, respectively.

Berry, Scott A.↗

Modeling and Inverse Controller Design for an Unmanned Aerial Vehicle Based on the Self-Organizing Map

The next generation of aircraft will have dynamics that vary considerably over the operating regime. A single controller will have difficulty to meet the design specifications. In this paper, a SOM-based local linear modeling scheme of an unmanned aerial vehicle (UAV) is developed to design a set of inverse controllers. The SOM selects the operating regime depending only on the embedded output space information and avoids normalization of the input data. Each local linear model is associated with a linear controller, which is easy to design. Switching of the controllers is done synchronously with the active local linear model that tracks the different operating conditions. The proposed multiple modeling and control strategy has been successfully tested in a simulator that models the LoFLYTE UAV.

Cho, Jeongho↗

Bootstrapping outperforms community‐weighted approaches for estimating the shapes of phenotypic distributions

Abstract Estimating phenotypic distributions of populations and communities is central to many questions in ecology and evolution. These distributions can be characterized by their moments (mean, variance, skewness and kurtosis) or diversity metrics (e.g. functional richness). Typically, such moments and metrics are calculated using community‐weighted approaches (e.g. abundance‐weighted mean). We propose an alternative bootstrapping approach that allows flexibility in trait sampling and explicit incorporation of intraspecific variation, and show that this approach significantly improves estimation while allowing us to quantify uncertainty. We assess the performance of different approaches for estimating the moments of trait distributions across various sampling scenarios, taxa and datasets by comparing estimates derived from simulated samples with the true values calculated from full datasets. Simulations differ in sampling intensity (individuals per species), sampling biases (abundance, size), trait data source (local vs. global) and estimation method (two types of community‐weighting, two types of bootstrapping). We introduce the traitstrap R package, which contains a modular and extensible set of bootstrapping and weighted‐averaging functions that use community composition and trait data to estimate the moments of community trait distributions with their uncertainty. Importantly, the first function in the workflow, trait_fill , allows the user to specify hierarchical structures (e.g. plot within site, experiment vs. control, species within genus) to assign trait values to each taxon in each community sample. Across all taxa, simulations and metrics, bootstrapping approaches were more accurate and less biased than community‐weighted approaches. With bootstrapping, a sample size of 9 or more measurements per species per trait generally included the true mean within the 95% CI. It reduced average percent errors by 26%–74% relative to community‐weighting. Random sampling across all species outperformed both size‐ and abundance‐biased sampling. Our results suggest randomly sampling ~9 individuals per sampling unit and species, covering all species in the community and analysing the data using nonparametric bootstrapping generally enable reliable inference on trait distributions, including the central moments, of communities. By providing better estimates of community trait distributions, bootstrapping approaches can improve our ability to link traits to both the processes that generate them and their effects on ecosystems.

Maitner, Brian S.↗

Atmospheric corrections for TIMS estimated emittance

The estimated temperature of the average of 500 lines of Thermal Infrared Multispectral Scanner (TIMS) data of the Pacific Ocean, from flight line 94, collected on 30 Sep. 1988, at 1931 GMT is shown. With no atmospheric corrections, estimated temperature decreases away from nadir (the center of the scan line). A LOWTRAN modeled correction, using local radiosonde data and instrument scan angle information, results in reversed limb darkening effects for most bands, and does not adequately correct all bands to the same temperature. The atmosphere tends to re-radiate energy at the wavelengths at which it most absorbs, and thus the overall difference between corrected and uncorrected temperatures is approximately 40 C, despite the average LOWTRAN calculated transmittance of only 60 percent between 8.1 and 11.6 microns. An alternative approach to atmospheric correction is a black body normalization. This is done by calculating a normalization factor for each pixel position and wavelength, which when applied results in a single calculated temperature, as would be expected for a gray body with near uniform emittance. The black body adjustment is based on the atmospheric conditions over the sea. The ground elevation profile along the remaining 3520 scan lines (approximately 10 km) of flight line 94, up the slopes of Kilauea, determined from aircraft pressure and laser altimeter data is shown. This flight line includes a large amount of vegetation that is clearly discernible on the radiance image, being much cooler than the surrounding rocks. For each of the 3520 scan lines, pixels were classified as vegetation or 'other'. A moving average of 51 lines was applied to the composite vegetation emittance for each scan line, to reduce noise. Assuming vegetation to be like water, and to act as gray body with an emittance of 0.986 across the spectrum, it is shown that that the LOWTRAN induced artifacts are severe, and other than for the 0.9.9 micron channel, not significantly different from applying no corrections at all. As expected, with increasing elevation atmospheric effects are slightly reduced, because moisture tends to be concentrated in the lowermost part of the atmosphere. The black body adjustment is highly robust, and even at elevations nearly 600 meters above the sea, remains an alternative procedure for use in calculating emittance.

Warner, T. A.↗

Localization of the ANG II type 2 receptor in the microcirculation of skeletal muscle

Only functional studies have suggested the presence of the ANG II type 2 (AT2) receptor in the microcirculation. To determine the distribution of this receptor in the rat skeletal muscle microcirculation, a polyclonal rabbit anti-rat antiserum was developed and used for immunohistochemistry and Western blot analysis. The antiserum was prepared against a highly specific and antigenic AT2-receptor synthetic peptide and was validated by competition and sensitivity assays. Western blot analysis demonstrated a prominent, single band at approximately 40 kDa in cremaster and soleus muscle. Immunohistochemical analysis revealed a wide distribution of AT2 receptors throughout the skeletal muscle microcirculation in large and small microvessels. Microanatomic studies displayed an endothelial localization of the AT2 receptor, whereas dual labeling with smooth muscle alpha-actin also showed colocalization of the AT2 receptor with vascular smooth muscle cells. Other cells associated with the microvessels also stained positive for AT2 receptors. Briefly, this study confirms previous functional data and localizes the AT2 receptor to the microcirculation. These studies demonstrate that the AT2 receptor is present on a variety of vascular cell types and that it is situated in a fashion that would allow it to directly oppose ANG II type 1 receptor actions.

NASA Discipline Cardiopulmonary↗