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At least 469 records · Page 26

Earth System Model Development - Energy Exascale Earth System Model (2020 Principal Investigator Meeting Report)

As part of the U.S. Department of Energy (DOE) Office of Biological and Environmental Research (BER), the Earth System Model Development (ESMD) program area supports significant research in Earth system model development, including major efforts in the Energy Exascale Earth System Model (E3SM) project. Convened virtually on October 26–29, the 2020 ESMD-E3SM Principal Investigator (PI) Meeting provided a forum to survey ESMD sponsored research, recent progress made by the ESMD science team and the broader Earth system modeling community within and outside of DOE, foster interactions across ESMD projects, and discuss research gaps and opportunities for future advancements.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Tactical Scientific Decision-Making during Crewed Astrobiology Mars Missions

The limitations placed upon human explorers on the surface of Mars will necessitate a methodology for scientific exploration that is different from standard approaches to terrestrial fieldwork and prior crewed exploration of the Moon. In particular, the data transmission limitations and communication latency between Earth and Mars create a unique situation for surface crew in contact with a terrestrial science team. The BASALT research program simulated a series of extravehicular activities (EVAs) in Mars analog terrains under various Mars-relevant bandwidth and latency conditions to investigate how best to approach this problem. Here we discuss tactical decision-making under these conditions, that is, how the crew on Mars interacts with a team of scientists and support personnel on Earth to collect samples of maximum scientific interest. We describe the strategies, protocols, and tools tested in BASALT EVAs and give recommendations on how best to conduct human exploration of Mars with support from Earth-based scientists. We find that even with scientists supporting them, the crew performing the exploration must be trained in the appropriate scientific disciplines in order to provide the terrestrial scientists with enough information to make decisions, but that with appropriate planning and structure, and tools such as a ‘‘dynamic leaderboard,’’ terrestrial scientists can add scientific value to an EVA, even under Mars communication latency

Decision-making↗

The Earth System Science Pathfinder Orbiting Carbon Observatory (OCO) Mission

A viewgraph presentation describing the Earth System Science Pathfinder Orbiting Carbon Observatory (OCO) Mission is shown. The contents include: 1) Why CO2?; 2) What Processes Control CO2 Sinks?; 3) OCO Science Team; 4) Space-Based Measurements of CO2; 5) Driving Requirement: Precise, Bias-Free Global Measurements; 6) Making Precise CO2 Measurements from Space; 7) OCO Spatial Sampling Strategy; 8) OCO Observing Modes; 9) Implementation Approach; 10) The OCO Instrument; 11) The OCO Spacecraft; 12) OCO Will Fly in the A-Train; 13) Validation Program Ensures Accuracy and Minimizes Spatially Coherent Biases; 14) Can OCO Provide the Required Precision?; 15) O2 Column Retrievals with Ground-based FTS; 16) X(sub CO2) Retrieval Simulations; 17) Impact of Albedo and Aerosol Uncertainty on X(sub CO2) Retrievals; 18) Carbon Cycle Modeling Studies: Seasonal Cycle; 19) Carbon Cycle Modeling Studies: The North-South Gradient in CO2; 20) Carbon Cycle Modeling Studies: Effect of Diurnal Biases; 21) Project Status and Schedule; and 22) Summary.

carbon cycles↗

Future Flight Opportunities and Calibration Protocols for CERES: Continuation of Observations in Support of the Long-Term Earth Radiation Budget Climate Data Record

The goal of the Clouds and the Earth s Radiant Energy System (CERES) project is to provide a long-term record of radiation budget at the top-of-atmosphere (TOA), within the atmosphere, and at the surface with consistent cloud and aerosol properties at climate accuracy. CERES consists of an integrated instrument-algorithm validation science team that provides development of higher-level products (Levels 1-3) and investigations. It involves a high level of data fusion, merging inputs from 25 unique input data sources to produce 18 CERES data products. Over 90% of the CERES data product volume involves two or more instruments. Continuation of the Earth Radiation Budget (ERB) Climate Data Record (CDR) has been identified as critical in the 2007 NRC Decadal Survey, the Global Climate Observing System WCRP report, and in an assessment titled Impacts of NPOESS Nunn-McCurdy Certification on Joint NASA-NOAA Climate Goals . Five CERES instruments have flown on three different spacecraft: TRMM, EOS-Terra and EOS-Aqua. In response, NASA, NOAA and NPOESS have agreed to fly the existing CERES Flight Model (FM-5) on the NPP spacecraft in 2011 and to procure an additional CERES Sensor with modest upgrades for flight on the JPSS C1 spacecraft in 2014, followed by a CERES follow-on sensor for flight in 2018. CERES is a scanning broadband radiometer that measures filtered radiance in the SW (0.3-5 m), total (TOT) (0.3-200 m) and WN (8-12 m) regions. Pre-launch calibration is performed on each Flight Model to meet accuracy requirements of 1% for SW and 0.5% for outgoing LW observations. Ground to flight or in-flight changes are monitored using protocols employing onboard and vicarious calibration sources. Studies of flight data show that SW response can change dramatically due to optical contamination. with greatest impact in blue-to UV radiance, where tungsten lamps are largely devoid of output. While science goals remain unchanged for ERB Climate Data Record, it is now understood that achieving these goals is more difficult for two reasons. The first is an increased understanding of the dynamics of the Earth/atmosphere system which demonstrates that separation of natural variability from anthropogenic change on decadal time scales requires observations with higher accuracy and stabilit

Priestley, Kory J.↗

Improved accuracy in quantitative laser-induced breakdown spectroscopy using sub-models

We report that accurate quantitative analysis of diverse geologic materials is one of the primary challenges faced by the Laser-Induced Breakdown Spectroscopy (LIBS)-based ChemCam instrument on the Mars Science Laboratory (MSL) rover. The SuperCam instrument on the Mars 2020 rover, as well as other LIBS instruments developed for geochemical analysis on Earth or other planets, will face the same challenge. Consequently, part of the ChemCam science team has focused on the development of improved multivariate analysis calibrations methods. Developing a single regression model capable of accurately determining the composition of very different target materials is difficult because the response of an element’s emission lines in LIBS spectra can vary with the concentration of other elements. We demonstrate a conceptually simple “submodel” method for improving the accuracy of quantitative LIBS analysis of diverse target materials. The method is based on training several regression models on sets of targets with limited composition ranges and then “blending” these “sub-models” into a single final result. Tests of the sub-model method show improvement in test set root mean squared error of prediction (RMSEP) for almost all cases. Lastly, the sub-model method, using partial least squares regression (PLS), is being used as part of the current ChemCam quantitative calibration, but the sub-model method is applicable to any multivariate regression method and may yield similar improvements.

47 OTHER INSTRUMENTATION↗

Spatially coordinated airborne data and complementary products for aerosol, gas, cloud, and meteorological studies: the NASA ACTIVATE dataset

The NASA Aerosol Cloud meTeorology Interactions oVer the western ATlantic Experiment (ACTIVATE) produced a unique dataset for research into aerosol–cloud–meteorology interactions, with applications extending from process-based studies to multi-scale model intercomparison and improvement as well as to remote-sensing algorithm assessments and advancements. ACTIVATE used two NASA Langley Research Center aircraft, a HU-25 Falcon and King Air, to conduct systematic and spatially coordinated flights over the northwest Atlantic Ocean, resulting in 162 joint flights and 17 other single-aircraft flights between 2020 and 2022 across all seasons. Data cover 574 and 592 cumulative flights hours for the HU-25 Falcon and King Air, respectively. The HU-25 Falcon conducted profiling at different level legs below, in, and just above boundary layer clouds (< 3 km) and obtained in situ measurements of trace gases, aerosol particles, clouds, and atmospheric state parameters. Under cloud-free conditions, the HU-25 Falcon similarly conducted profiling at different level legs within and immediately above the boundary layer. The King Air (the high-flying aircraft) flew at approximately ~ 9 km and conducted remote sensing with a lidar and polarimeter while also launching dropsondes (785 in total). Collectively, simultaneous data from both aircraft help to characterize the same vertical column of the atmosphere. In addition to individual instrument files, data from the HU-25 Falcon aircraft are combined into “merge files” on the publicly available data archive that are created at different time resolutions of interest (e.g., 1, 5, 10, 15, 30, 60 s, or matching an individual data product's start and stop times). This paper describes the ACTIVATE flight strategy, instrument and complementary dataset products, data access and usage details, and data application notes. The data are publicly accessible through https://doi.org/10.5067/SUBORBITAL/ACTIVATE/DATA001 (ACTIVATE Science Team, 2020).

54 ENVIRONMENTAL SCIENCES↗

Observations and Modeling of the Green Ocean Amazon 2014/15: Hydroxyl Radical (OH) Chemical Ionization Mass Spectrometer (CIMS) Field Campaign Report

The University of California, Irvine, science team (Dr. Saewung Kim, Dr. Roger Seco, Dr. Alex Guenther, and Dr. Jim Smith) deployed a chemical ionization mass spectrometer system for hydroxyl radical (OH) and sulfuric acid quantifications. As part of the GoAmazon 2014/15 field campaign. Hydroxyl radical determines tropospheric oxidation capacity and had been expected to be very low in the pristine rain forest region such as the Brazilian Amazon because of the presence of significant levels of highly reactive biogenic volatile organic compounds and very low levels of NO, which is an OH recycling agent. However, several recent in situ OH observations provided by a laser-induced fluorescence system reported unaccountably high OH concentrations. To address this discrepancy, a series of laboratory and theoretical studies has postulated chemical reaction mechanisms of isoprene that may regenerate OH in photo-oxidation processes. Along with these efforts, potential artifacts on the laser induced fluorescence system from isoprene and its oxidation products also have been explored. Therefore, the first chemical ionization mass spectrometer observations at the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility’s T3 site in Manacapuru, Brazil, are expected to provide a critical experimental constraint to address uncertainty in constraining oxidation capacity over pristine rain forest environments. In addition, we deployed a National Center for Atmospheric Research (NCAR) proton transfer reaction time-of-flight mass spectrometer to characterize atmospheric volatile organic compound levels, especially isoprene and its oxidation products, which are critical input parameters for box modeling to simulate OH with different isoprene photo-oxidation schemes. As there has been no report on noticeable new particle formation events, our first in situ sulfuric acid observations in the Amazon rain forest were expected to constrain the reasons behind such observations. The planned field observations during Intensive Observational Periods I and II, post-field campaign calibrations, and preliminary data reports have been completed. We presented preliminary data analysis results at the 2014 American Geophysical Union Fall meeting and the GOAmazon Science Meeting in Boston (May 2015). We are in the process of submitting two more abstracts to the 2015 American Geophysical Union fall meeting while we are preparing two manuscripts to be submitted to (tentatively) the GOAmazon special issue of Atmospheric Chemistry and Physics.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Desert-Urban System Integrated Atmospheric Monsoon (DUSTIEAIM) in the Southwestern United States Science Plan

The Desert-Urban System Integrated Atmospheric Monsoon (DUSTIEAIM) campaign is a groundbreaking, high-impact scientific mission that will transform how we understand and respond to energy and water challenges in one of America’s fastest-growing and most heat-stressed urban regions: Phoenix, Arizona. Starting in April 2026, this 18-month field campaign harnesses the full power of the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) user facility and an interdisciplinary science team including national laboratories, universities, and agencies with a broad range of subject-matter expertise. With cutting-edge instruments, active and passive ground-based sensors, radars, and integrated modeling, DUSTIEAIM will deliver the most comprehensive environmental data set ever collected for a desert-urban-agricultural interface.

54 ENVIRONMENTAL SCIENCES↗

GoAmazon 2014/15. SRI-PTR-ToFMS Field Campaign Report

Our science team, including Dr. Alex Guenther (previously at Pacific Northwest National Laboratory (PNNL) and now at the University of California, Irvine) Dr. Saewung Kim and Dr. Roger Seco, and Dr. Jim Smith (previously at NCAR and now at UC Irvine), deployed a selected reagent ion – proton transfer reaction – time-of-flight mass spectrometer (SRI-PTR-TOFMS) to the T3 site during the GoAmazon study. One of the major uncertainties in climate model simulations is the effects of aerosols on radiative forcing, and a better understanding of the factors controlling aerosol distributions and life cycle is urgently needed. Aerosols contribute directly to the Earth’s radiation balance by scattering or absorbing light as a function of their physical properties and indirectly through particle-cloud interactions that lead to cloud formation and the modification of cloud properties. On a global scale, the dominant source of organic aerosol is biogenic volatile organic compounds (BVOC) emitted from terrestrial ecosystems. These organic aerosols are a major part of the total mass of all airborne particles and are currently not sufficiently represented in climate models. To incorporate quantitatively the effects of BVOCs and their oxidation products on biogenic organic aerosol (BOA) requires parameterization of their production in terrestrial ecosystems and their atmospheric transformations. This project was designed to reduce the gaps in our understanding of how these processes control BVOCs and BOAs, and their impact on climate. This was accomplished by wet and dry season measurements at the U.S. Department of Energy (DOE)’s Atmospheric Radiation Measurement (ARM) Climate Research Facility T3 site along with a comprehensive suite of complementary measurements. The specific goals were to 1) measure and mechanistically understand the factors affecting aerosol distributions over a tropical rain forest, especially the effects of anthropogenic pollution as a perturbation to the natural state, and 2) develop and implement an upscaling analysis from this new data set and knowledge of aerosol distributions to prognosticate possible climatic impacts of present-day urban pollution and possibly greater pollution in the future.

54 ENVIRONMENTAL SCIENCES↗

The SuperCam Instrument Suite on the Mars 2020 Rover: Science Objectives and Mast-Unit Description

On the NASA 2020 rover mission to Jezero crater, the remote determination of the texture, mineralogy and chemistry of rocks is essential to quickly and thoroughly characterize an area and to optimize the selection of samples for return to Earth. As part of the Perseverance payload, SuperCam is a suite of five techniques that provide critical and complementary observations via Laser-Induced Breakdown Spectroscopy (LIBS), Time-Resolved Raman and Luminescence (TRR/L), visible and near-infrared spectroscopy (VISIR), high-resolution color imaging (RMI), and acoustic recording (MIC). SuperCam operates at remote distances, primarily 2–7 m, while providing data at sub-mm to mm scales. We report on SuperCam’s science objectives in the context of the Mars 2020 mission goals and ways the different techniques can address these questions. The instrument is made up of three separate subsystems: the Mast Unit is designed and built in France; the Body Unit is provided by the United States; the calibration target holder is contributed by Spain, and the targets themselves by the entire science team. This publication focuses on the design, development, and tests of the Mast Unit; companion papers describe the other units. The goal of this work is to provide an understanding of the technical choices made, the constraints that were imposed, and ultimately the validated performance of the flight model as it leaves Earth, and it will serve as the foundation for Mars operations and future processing of the data.

47 OTHER INSTRUMENTATION↗

Nationwide Buildings Energy Research enabled through an integrated Data Intensive Scientific Workflow and Advanced Analysis Environment

Modern workflow systems enable scientists to run ensemble simulations at unprecedented scales and levels of complexity, allowing them to study system sizes previously impossible to achieve, due to the inherent resource requirements needed for the modeling work. However as a result of these new capabilities the science teams suddenly also face unprecedented data volumes that they are unable to analyze with their existing tools and methodologies in a timely fashion. In this paper we will describe the ongoing development work to create an integrated data intensive scientific workflow and analysis environment that offers researchers the ability to easily create and execute complex simulation studies and provides them with different scalable methods to analyze the resulting data volumes. The integration of simulation and analysis environments is hereby not only a question of ease of use, but supports fundamental functions in the correlated analysis of simulation input, execution details and derived results for multi-variant, complex studies. To this end the team extended and integrated the existing capabilities of the Velo data management and analysis infrastructure, the MeDICi data intensive workflow system and RHIPE the R for Hadoop version of the well-known statistics package, as well as developing a new visual analytics interface for the result exploitation by multi-domain users. The capabilities of the new environment are demonstrated on a use case that focusses on the Pacific Northwest National Laboratory (PNNL) building energy team, showing how they were able to take their previously local scale simulations to a nationwide level by utilizing data intensive computing techniques not only for their modeling work, but also for the subsequent analysis of their modeling results. As part of the PNNL research initiative PRIMA (Platform for Regional Integrated Modeling and Analysis) the team performed an initial 3 year study of building energy demands for the US Eastern Interconnect domain, which they are now planning to extend to predict the demand for the complete century. The initial study raised their data demands from a few GBs to 400GB for the 3year study and expected tens of TBs for the full century.

99 GENERAL AND MISCELLANEOUS↗

Challenges in spatial metabolomics and proteomics for functional tissue unit and single-cell resolution

While transcriptomics is the most broadly applied technology for global spatial and single cell measurements in healthy and diseased tissues. Transcripts are often used as a proxy for protein and even metabolite measurements, but it has become commonly accepted that extrapolating this kind of information is a poor proxy and not a substitute for direct measurement. Within the last decade advanced developments of mass spectrometry-based assays have made these direct measurements not only possible, but routine. Where mass spectrometry has become an enabling technology, and various methods can now detect hundreds of metabolites and thousands of proteins from samples. Not only can this be performed within bulk measurements, but much effort has been directed into translating these measurements to single cells and tissues at cellular resolution. The information obtained from mass spectrometry is now able to trace metabolic events and decipher feedback loops across anatomical regions, connecting genetic and metabolic networks that define phenotypes. Herein, we will broadly overview developments in the field over the past decade, leading into several case studies which highlight the direct measurement of metabolites, proteins, and proteoforms from thinly sliced tissues. Much of this work is feasible due to multidisciplinary team science, and we offer brief perspective on paths forward and the challenges that persist with adoption and application of spatial omics.

59 BASIC BIOLOGICAL SCIENCES↗

A Field Guide to Corralling the Chaos: A Conceptual Framework for Using Models to Guide Opportunistic Field Studies of Natural Disturbances

Watersheds regulate biogeochemical processes and provide ecosystem services to human societies, but disturbances can fundamentally alter these processes across space and time. Determining when and where to sample to capture disturbance impacts in watersheds remains a central challenge. Manipulation studies and long-term monitoring are often constrained by scope, and opportunistic studies often lack pre-disturbance data needed to statistically determine disturbance impacts. We identify a persistent knowledge gap: the absence of a clear, transferable framework to guide opportunistic disturbance research where pre-disturbance data collection is not a feasible option. To address this gap, we present a conceptual framework that intentionally integrates modeling and empirical observation in an iterative, stepwise model–experiment workflow. We demonstrate its application through two contrasting case studies: wildfire impacts on headwater streams using a pre-disturbance preparedness approach, and saltwater flooding impacts on coastal forests using an ‘ex-post-facto’ approach. From these applications, we assess strengths, limitations, and the critical role of team science for transferability across disturbance types and study designs. Broadly, this framework offers a scalable path towards more rigorous, timely, and actionable disturbance science that can inform watershed management, hazard risk reduction, and ecosystem resilience.

Coastal Biogeochemistry↗

Absorption-line detections of 10{sup 5}-10{sup 6} K gas in spiral-rich groups of galaxies

Using the Cosmic Origins Spectrograph (COS) on the Hubble Space Telescope, the COS Science Team has conducted a high signal-to-noise survey of 14 bright QSOs. In a previous paper, these far-UV spectra were used to discover 14 'warm' (T ≥ 10{sup 5} K) absorbers using a combination of broad Lyα and broad O VI absorptions. A reanalysis of a few of this new class of absorbers using slightly relaxed fitting criteria finds as many as 20 warm absorbers could be present in this sample. A shallow, wide spectroscopic galaxy redshift survey has been conducted around these sight lines to investigate the warm absorber environment, which is found to be spiral-rich groups or cluster outskirts with radial velocity dispersions σ = 250-750 km s{sup –1}. While 2σ evidence is presented favoring the hypothesis that these absorptions are associated with the galaxy groups and not with the individual, nearest galaxies, this evidence has considerable systematic uncertainties and is based on a small sample size so it is not entirely conclusive. If the associations are with galaxy groups, the observed frequency of warm absorbers (dN/dz = 3.5-5 per unit redshift) requires them to be very extended as an ensemble on the sky (∼1 Mpc in radius at high covering factor). Most likely these warm absorbers are interface gas clouds whose presence implies the existence of a hotter (T ∼ 10{sup 6.5} K), diffuse, and probably very massive (>10{sup 11} M {sub ☉}) intra-group medium which has yet to be detected directly.

79 ASTRONOMY AND ASTROPHYSICS↗

The NASA ISRO SAR (NISAR) Mission - Validation of Science Measurement Requirements

The NASA ISRO Synthetic Aperture Radar (NISAR) is scheduled for launch early in 2024 from the Satish Dhawan Space Centre (SDSC), at Sriharikota, near Chennai, India. This mission is the result of a collaboration between NASA and Indian Space Research Organization (ISRO), where NASA has contributed elements of the mission such as an L-band SAR, and ISRO has contributed other elements, such as an S-band SAR. After successful launch, the NISAR mission will collect left-looking L-band SAR data over most of the Earth’s land areas twice during every 12-day exact repeat orbit. (once while in an ascending orbit direction and once while in a descending orbit direction). NASA and ISRO have individual and joint requirements on the mission that include the performance of the imaging radars onboard the spacecraft. For example, NASA must demonstrate that this L-band SAR will achieve a set of identified science measurement accuracy requirements that span Ecosystem science, Solid Earth science, and Cryosphere science disciplines. Likewise, ISRO has several applications objectives on both the L-band and S-band data from NISAR that the ISRO science team and project will be developing and testing. Pre-launch and post-launch activities have been planned to validate that these requirements are met. Here, we will discuss how the NASA plans are being executed and will present any initial results at the conference.

Chapman, Bruce↗

A field guide to cultivating computational biology

Evolving in sync with the computation revolution over the past 30 years, computational biology has emerged as a mature scientific field. While the field has made major contributions toward improving scientific knowledge and human health, individual computational biology practitioners at various institutions often languish in career development. As optimistic biologists passionate about the future of our field, we propose solutions for both eager and reluctant individual scientists, institutions, publishers, funding agencies, and educators to fully embrace computational biology. We believe that in order to pave the way for the next generation of discoveries, we need to improve recognition for computational biologists and better align pathways of career success with pathways of scientific progress. With 10 outlined steps, we call on all adjacent fields to move away from the traditional individual, single-discipline investigator research model and embrace multidisciplinary, data-driven, team science.

59 BASIC BIOLOGICAL SCIENCES↗

Methane Hydrate Field Program: Development of a Scientific Plan for a Methane Hydrate-Focused Marine Drilling, Logging and Coring Program

This final report document summarizes the activities undertaken and the output from three primary deliverables generated during this project. This fifteen month effort comprised numerous key steps including the creation of an international methane hydrate science team, determining and reporting the current state of marine methane hydrate research, convening an international workshop to collect the ideas needed to write a comprehensive Marine Methane Hydrate Field Research Plan and the development and publication of that plan. The following documents represent the primary deliverables of this project and are discussed in summary level detail in this final report: Historical Methane Hydrate Project Review Report; Methane Hydrate Workshop Report; Topical Report: Marine Methane Hydrate Field Research Plan; and Final Scientific/Technical Report.

03 NATURAL GAS↗

Neutron Star Science with the NuSTAR

The Nuclear Spectroscopic Telescope Array (NuSTAR), launched in June 2012, helped scientists obtain for the first time a sensitive high-­energy X-­ray map of the sky with extraordinary resolution. This pioneering telescope has aided in the understanding of how stars explode and neutron stars are born. LLNL is a founding member of the NuSTAR project, with key personnel on its optics and science team. We used NuSTAR to observe and analyze the observations of different neutron star classes identified in the last decade that are still poorly understood. These studies not only help to comprehend newly discovered astrophysical phenomena and emission processes for members of the neutron star family, but also expand the utility of such observations for addressing broader questions in astrophysics and other physics disciplines. For example, neutron stars provide an excellent laboratory to study exotic and extreme phenomena, such as the equation of state of the densest matter known, the behavior of matter in extreme magnetic fields, and the effects of general relativity. At the same time, knowing their accurate populations has profound implications for understanding the life cycle of massive stars, star collapse, and overall galactic evolution.

79 ASTRONOMY AND ASTROPHYSICS↗