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The purpose of this project is to continue supporting customizations of algorithms and raw data file structures to enhance software workflows for liquid chromatography (LC), mass spectrometry (MS) and ion mobility mass spectrometry (IM-MS)-based protein and metabolite characterization.
239 Pu files validated: ENDF/B-VIII.0, ENDF/B-VIII.0 except for 239 Pu from INDEN (p49) which performs the same in crit testing as (p53), ENDF/B-VIII.0 except for 239 Pu from INDEN (p51), ENDF/B-VIII.0 except for 239 Pu from LANL (4/21), ENDF/B-VIII.0 except for 239 Pu from LLNL (5/16); tweaked nu-bar, ENDF/B-VIII.0 except for 239 Pu from LLNL (5/1)
The Eulerian code PAGOSA now contains an option for the forward time integration of any user selected material in the Lagrangian frame of reference. This option is accomplished using a Multifield version of Brackbill’s FLIP plus Sulsky’s MPM. FLIP+MPM is a Marker Lagrangian scheme that is not to be confused with well known Grid Lagrangian schemes. This Marker Lagrangian method allows materials to undergo completely arbitrary deformation, up to and including fracture and separation. Using this option makes PAGOSA into a mixed frame simulation tool such that fluids can be integrated in the Eulerian frame and solids integrated in the Lagrangian frame. Boundaries between the fields are said to be ’immersed’ in the computational domain, and their nature is formulated using Multifield Theory. Each Marker in a field of FLIP+MPM material tracks the thermodynamic state of a small (but finite) piece of mass. Initiation of the Markers using the geometry and material information from CAD Assembly files is the subject of the talk. The ease and speed with which the dynamics of the assembly can be studied is demonstrated.
This document is the final report for CRADA 410 (Project No. 72496). The purpose of this project was supporting customizations of algorithms and raw data file structures to enhance software workflows for liquid chromatography (LC), mass spectrometry (MS) and ion mobility mass spectrometry (IM-MS)-based metabolite characterization. PNNL worked with Agilent to evaluate and improve the integration of ion mobility into existing MS data analysis methods of Agilent software tools. The project augmented PNNL’s capabilities to analyze complex omics samples. These capabilities are directly beneficial to DOE and PNNL efforts to characterize and analyze compounds in microbial and plant communities. The project assisted Agilent in further developing improved instrument-software solutions combining ion mobility with mass spectrometry for widespread applications in life sciences and other fields.
This report provides the status of discrete nuclear levels and inelastic gamma-ray production for neutron induced reactions in current ENDF-VIII.0 evaluations for the isotopes in the GRIN project. Different categories of issues are identified after a comparison with information from “adopted” ENSDF files. Improvement strategies are given and recommendations are described. We have included a similar, but more limited, analysis for thermal capture data where EGAF and ENSDF thermal libraries are considered. In addition, we provide a validation plan to employ different transport code simulations.
Support customizations of algorithms and raw data file structures to enhance software workflows for liquid chromatography (LC), mass spectrometry (MS) and ion mobility mass spectrometry (IM-MS)-based metabolite characterization. Evaluate and improve the integration of ion mobility to existing MS analysis methods of the Mass Profiler Professional workflow (Mass Profiler, ID Browser and Mass Profiler Professional).
The ASCII MCNP output file is converted to an interactive PDF using legacy printer control characters.
The purpose of this project was to continue supporting customizations of algorithms and raw data file structures to enhance software workflows for liquid chromatography (LC), mass spectrometry (MS) and ion mobility mass spectrometry (IM-MS)-based protein and metabolite characterization. PNNL worked with Agilent to design, implement, evaluate, and demonstrate new algorithms and integrated them as functionalities into the PNNL-PreProcessor software. The project augmented PNNL’s capabilities to analyze complex proteomics and metabolomics samples. These capabilities are directly beneficial to DOE and PNNL efforts to characterize and analyze these compounds in microbial and plant communities. The project assisted Agilent in further developing improved instrument-software solutions combining liquid chromatography and ion mobility with mass spectrometry for widespread applications in life sciences and other fields.
A Python tool for converting the MCNP6 HDF5 PTRAC file to a list of Python trees is presented. The particle trees store MCNP6 simulated events for each history using parent-child relationships, which ensures that branching processes are accurately reproduced. A variety of post-processing scripts are presented and used in conjunction with the Python particle trees to make special tallies that are currently not available in the MCNP6 software and visualize the particle tracks.
On August 30, 2024, the National Nuclear Data Center (NNDC) released the ENDF/B-VIII.1 nuclear data library [1]. The library was released in the standard Evaluated Nuclear Data File (ENDF) format.
Lawrence Berkeley National Laboratory (Berkeley Lab) estimates hourly project-level generation data for utility-scale solar projects and hourly county-level generation data for residential and non-residential distributed photovoltaic (PV) systems in the seven organized wholesale markets and 10 additional Balancing Areas. To encourage its broader use, Berkeley Lab has made this data file public here at OEDI, covering the years 2012-2020. The public project-level dataset is updated annually with data from the previous calendar year. For more information about the research project, including a technical report, briefing material, visualizations, and additional data, please visit the project homepage linked in this submission.
This dataset contains the Recorder trace files of 91 built-in tests from three widely-used I/O libraries. It was utilized in our IPDPS'25 paper, "VerifyIO: Verifying Adherence to Parallel I/O Consistency Semantics". The dataset can be used to reproduce the results presented in the paper and to conduct additional analyses
Raw LC–MS data files in mzML format obtained from isotopic feeding experiments in Aconitum plicatum callus cultures. Samples fed with L-serine (2,3,3-D3,¹⁵N) were acquired at a resolution of 500,000 to allow resolution of the nitrogen isotopologue. Control samples were re-acquired at the same resolution for comparison.
Briefly, these data files contain Fourier-transform Infrared Spectroscopy (FTIR) and machine learning data that support the results from LA-UR-25-31202. This dataset was published under LA-UR-26-24024.
Time-Averaged "Slow" Carbon Dioxide Flux Data from wind and gas files, with additional diagnostic data: 22m samples
Time-Averaged "Slow" Carbon Dioxide Flux Data from wind and gas files, with additional diagnostic data: 40m samples