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At least 451 records · Page 25

Quantitative Uncertainty Analysis for Diffraction

Current software uses a least squares statistical method. For each model parameter, current software yields a point estimate and estimated standard error for each point estimate. In contrast, we have employed a Bayesian approach with sampling algorithm to provide a full posterior probability density function on each model parameter. This yields a different type of solution (probabilistic) with better fidelity. The Quantitative Uncertainty Analysis for Diffraction (QUAD) package returns a matrix of affect model parameters as a function of iteration through the MCMC analysis. QUAD is a Python code that allows for analysis of X-ray and neutron diffraction data to infer the structure of materials with quantifiable certainty. The code uses Bayesian statistics and Markov chain sampling algorithms to create posterior probability distributions on all material structure parameters that are modeled by a researcher. The statistical packages use the open source GSASII project as a library to calculate model diffraction patterns.

Fancher, ChristopherM↗

Feature-agnostic metabolomics for determining effective subcytotoxic doses of common pesticides in human cells

Although classical molecular biology assays can provide a measure of cellular response to chemical challenges, they rely on a single biological phenomenon to infer a broader measure of cellular metabolic response. These methods do not always afford the necessary sensitivity to answer questions of subcytotoxic effects, nor do they work for all cell types. Likewise, boutique assays such as cardiomyocyte beat rate may indirectly measure cellular metabolic response, but they too, are limited to measuring a specific biological phenomenon and are often limited to a single cell type. For these reasons, toxicological researchers need new approaches to determine metabolic changes across various doses in differing cell types, especially within the low-dose regime. Here, the data collected herein demonstrate that LC-MS/MS-based untargeted metabolomics with a feature-agnostic view of the data, combined with a suite of statistical methods including an adapted environmental threshold analysis, provides a versatile, robust, and holistic approach to directly monitoring the overall cellular metabolomic response to pesticides. When employing this method in investigating two different cell types, human cardiomyocytes and neurons, this approach revealed separate subcytotoxic metabolomic responses at doses of 0.1 and 1 µM of chlorpyrifos and carbaryl. These findings suggest that this agnostic approach to untargeted metabolomics can provide a new tool for determining effective dose by metabolomics of chemical challenges, such as pesticides, in a direct measurement of metabolomic response that is not cell type-specific or observable using traditional assays.

59 BASIC BIOLOGICAL SCIENCES↗

Mapping Quasar Light Echoes in 3D with Ly α Forest Tomography

The intense radiation emitted by luminous quasars dramatically alters the ionization state of their surrounding IGM. This so-called proximity effect extends out to tens of Mpc, and manifests as large coherent regions of enhanced Ly (Ly) forest transmission in absorption spectra of background sightlines. In this work, we present a novel method based on Ly forest tomography, which is capable of mapping these quasar "light echoes" in three dimensions. Using a dense grid (10-100) of faint (m r ≈ 24.7 mag) background galaxies as absorption probes, one can measure the ionization state of the IGM in the vicinity of a foreground quasar, yielding detailed information about the quasar's radiative history and emission geometry. An end-to-end analysis-combining cosmological hydrodynamical simulations post-processed with a quasar emission model, realistic estimates of galaxy number densities, and instrument + telescope throughput-is conducted to explore the feasibility of detecting quasar light echoes. We present a new, fully Bayesian statistical method that allows one to reconstruct quasar light echoes from thousands of individual low-S/N transmission measurements. Armed with this tool, we undertake an exhaustive parameter study and show that light echoes can be convincingly detected for luminous (M 1450 <-27.5 mag, corresponding to m 1450 < 18.4 mag at z≃3.6) quasars at redshifts 3 < z QSO < 5, and that a relative precision better than 20% on the quasar age can be achieved for individual objects in the expected range of ages between 1 and 100 Myr. The observational requirements are relatively modest: Moderate-resolution (R ≳ 750), multiobject spectroscopy at a low signal-to-noise ratio (S/N > 5) is sufficient, requiring three-hour integrations using existing instruments on 8 m class telescopes.

79 ASTRONOMY AND ASTROPHYSICS↗

Finite Element Analysis of Reverberation Chambers

The primary motivating factor behind the initiation of this work was to provide a deterministic means of establishing the validity of the statistical methods that are recommended for the determination of fields that interact in -an avionics system. The application of finite element analysis to reverberation chambers is the initial step required to establish a reasonable course of inquiry in this particularly data-intensive study. The use of computational electromagnetics provides a high degree of control of the "experimental" parameters that can be utilized in a simulation of reverberating structures. As the work evolved there were four primary focus areas they are: 1. The eigenvalue problem for the source free problem. 2. The development of a complex efficient eigensolver. 3. The application of a source for the TE and TM fields for statistical characterization. 4. The examination of shielding effectiveness in a reverberating environment. One early purpose of this work was to establish the utility of finite element techniques in the development of an extended low frequency statistical model for reverberation phenomena. By employing finite element techniques, structures of arbitrary complexity can be analyzed due to the use of triangular shape functions in the spatial discretization. The effects of both frequency stirring and mechanical stirring are presented. It is suggested that for the low frequency operation the typical tuner size is inadequate to provide a sufficiently random field and that frequency stirring should be used. The results of the finite element analysis of the reverberation chamber illustrate io-W the potential utility of a 2D representation for enhancing the basic statistical characteristics of the chamber when operating in a low frequency regime. The basic field statistics are verified for frequency stirring over a wide range of frequencies. Mechanical stirring is shown to provide an effective frequency deviation.

Bunting, Charles F.↗

Comparison of Postural Recovery Following Short and Long Duration Spaceflights

INTRODUCTION: Post-flight postural ataxia reflects adaptive changes to vestibulo-spinal reflexes and control strategies adopted for movement in weightlessness. Quantitative measures obtained during computerized dynamic posturography (CDP) from US and Russian programs provide insight into the effect of spaceflight duration in terms of both the initial decrements and recovery of postural stability. METHODS: CDP was obtained on 117 crewmembers following Shuttle flights lasting 4-17 days, and on 64 crewmembers following long-duration missions lasting 48-380 days. Although the number and timing of sessions varied, the goal was to characterize postural recovery pooling similar measures from different research and flight medicine programs. This report focuses on eyes closed, head erect conditions with either a fixed or sway-referenced base of support. A smaller subset of subjects repeated the sway-referenced condition while making pitch head movements (+/- 20deg at 0.33Hz). Equilibrium scores were derived from peak-to-peak anterior-posterior sway. Fall probability was modeled using Bayesian statistical methods to estimate parameters of a logit function. RESULTS: The standard Romberg condition was the least sensitive. Longer duration flights led to larger decrements in stability with sway-reference support during the first 1-2 days, although the timecourse of recovery was similar across flight duration with head erect. Head movements led to increased incidence of falls during the first week, with a significantly longer recovery following long duration flights. CONCLUSIONS: The diagnostic assessment of postural instability, and differences in the timecourse of postural recovery between short and long flight durations, are more pronounced during unstable support conditions requiring active head movements.

Wood, S. J.↗

Uncertainty quantification of few group diffusion theory constants generated by the B1 theory-augmented Monte Carlo method

The purpose of this paper is to quantify uncertainties of fuel pin cell or fuel assembly (FA) homogenized few group diffusion theory constants generated from the B1 theory-augmented Monte Carlo (MC) method. A mathematical formulation of the first kind is presented to quantify uncertainties of the few group constants in terms of the two major sources of the MC method; statistical and nuclear cross section and nuclide number density input data uncertainties. The formulation is incorporated into the Seoul National Univ. MC code McCARD. It is then used to compute the uncertainties of the burnup-dependent homogenized two group constants of a low-enriched UO{sub 2} fuel pin cell and a PWR FA on the condition that nuclear cross section input data of U-235 and U-238 from JENDL 3.3 library and nuclide number densities from the solution to fuel depletion equations have uncertainties. The contribution of the MC input data uncertainties to the uncertainties of the two group constants of the two fuel systems is separated from that of the statistical uncertainties. The utilities of uncertainty quantifications are then discussed from the standpoints of safety analysis of existing power reactors, development of new fuel or reactor system design, and improvement of covariance files of the evaluated nuclear data libraries. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Creation of a Robust and Generalizable Machine Learning Classifier for Patient Ventilator Asynchrony

Background: As healthcare increasingly digitizes, streaming waveform data is being made available from an variety of sources, but there still remains a paucity of performant clinical decision support systems. For example, in the intensive care unit (ICU) existing automated alarm systems typically rely on simple thresholding that result in frequent false positives. Recurrent false positive alerts create distrust of alarm mechanisms that can be directly detrimental to patient health. To improve patient care in the ICU, we need alert systems that are both pervasive, and accurate so as to be informative and trusted by providers. Objective: We aimed to develop a machine learning-based classifier to detect abnormal waveform events using the use case of mechanical ventilation waveform analysis, and the detection of harmful forms of ventilation delivery to patients. We specifically focused on detecting injurious subtypes of patient-ventilator asynchrony (PVA).Methods: Using a dataset of breaths recorded from 35 different patients, we used machine learning to create computational models to automatically detect, and classify two types of injurious PVA, double trigger asynchrony (DTA), breath stacking asynchrony (BSA). We examined the use of synthetic minority over-sampling technique (SMOTE) to overcome class imbalance problems, varied methods for feature selection, and use of ensemble methods to optimize the performance of our model. Results: We created an ensemble classifier that is able to accurately detect DTA at a sensitivity/specificity of 0.960/0.975, BSA at sensitivity/specificity of 0.944/0.987, and non-PVA events at sensitivity/specificity of .967/.980. Conclusions: Our results suggest that it is possible to create a high-performing machine learning-based model for detecting PVA in mechanical ventilator waveform data in spite of both intra-patient, and inter-patient variability in waveform patterns, and the presence of clinical artifacts like cough and suction procedures. Our work highlights the importance of addressing class imbalance in clinical data sets, and the combined use of statistical methods and expert knowledge in feature selection.

97 MATHEMATICS AND COMPUTING↗

Verification of Space Station Secondary Power System Stability Using Design of Experiment

This paper describes analytical methods used in verification of large DC power systems with applications to the International Space Station (ISS). Large DC power systems contain many switching power converters with negative resistor characteristics. The ISS power system presents numerous challenges with respect to system stability such as complex sources and undefined loads. The Space Station program has developed impedance specifications for sources and loads. The overall approach to system stability consists of specific hardware requirements coupled with extensive system analysis and testing. Testing of large complex distributed power systems is not practical due to size and complexity of the system. Computer modeling has been extensively used to develop hardware specifications as well as to identify system configurations for lab testing. The statistical method of Design of Experiments (DoE) is used as an analysis tool for verification of these large systems. DOE reduces the number of computer runs which are necessary to analyze the performance of a complex power system consisting of hundreds of DC/DC converters. DoE also provides valuable information about the effect of changes in system parameters on the performance of the system. DoE provides information about various operating scenarios and identification of the ones with potential for instability. In this paper we will describe how we have used computer modeling to analyze a large DC power system. A brief description of DoE is given. Examples using applications of DoE to analysis and verification of the ISS power system are provided.

Karimi, Kamiar J.↗

The Convolutional Multiple Whole Profile (CMWP) Fitting Method, a Global Optimization Procedure for Microstructure Determination

The analysis of line broadening in X-ray and neutron diffraction patterns using profile functions constructed on the basis of well-established physical principles and TEM observations of lattice defects has proven to be a powerful tool for characterizing microstructures in crystalline materials. These principles are applied in the convolutional multiple-whole-profile (CMWP) procedure to determine dislocation densities, crystallite size, stacking fault and twin boundary densities, and intergranular strains. The different lattice defect contributions to line broadening are separated by considering the hkl dependence of strain anisotropy, planar defect broadening and peak shifts, and the defect dependent profile shapes. The Levenberg–Marquardt (LM) peak fitting procedure can be used successfully to determine crystal defect types and densities as long as the diffraction patterns are relatively simple. However, in more complicated cases like hexagonal materials or multiple-phase patterns, using the LM procedure alone may cause uncertainties. Here, we extended the CMWP procedure by including a Monte Carlo statistical method where the LM and a Monte Carlo algorithm were combined in an alternating manner. The updated CMWP procedure eliminated uncertainties and provided global optimized parameters of the microstructure in good correlation with electron microscopy methods.

36 MATERIALS SCIENCE↗

New near-infrared period–luminosity–metallicity relations for RR Lyrae stars and the outlook for GAIA

We present results of the analysis of 70 RR Lyrae stars located in the bar of the Large Magellanic Cloud (LMC). Combining the spectroscopically determined metallicity of these stars from the literature with precise periods from the OGLE III catalog and multi-epoch K{sub s} photometry from the VISTA survey of the Magellanic Clouds system, we derive a new near-infrared period–luminosity–metallicity (PL{sub K{sub s}}Z) relation for RR Lyrae variables. In order to fit the relation we use a fitting method developed specifically for this study. The zero-point of the relation is estimated two different ways: by assuming the value of the distance to the LMC and by using Hubble Space Telescope parallaxes of five RR Lyrae stars in the Milky Way (MW). The difference in distance moduli derived by applying these two approaches is ∼0.2 mag. To investigate this point further we derive the PL{sub K{sub s}}Z relation based on 23 MW RR Lyrae stars that had been analyzed in Baade–Wesselink studies. We compared the derived PL{sub K{sub s}}Z relations for RR Lyrae stars in the MW and LMC. Slopes and zero-points are different, but still consistent within the errors. The shallow slope of the metallicity term is confirmed by both LMC and MW variables. The astrometric space mission Gaia is expected to provide a huge contribution to the determination of the RR Lyrae PL{sub K{sub s}}Z relation; however, calculating an absolute magnitude from the trigonometric parallax of each star and fitting a PL{sub K{sub s}}Z relation directly to period and absolute magnitude leads to biased results. We present a tool to achieve an unbiased solution by modeling the data and inferring the slope and zero-point of the relation via statistical methods.

79 ASTRONOMY AND ASTROPHYSICS↗

Hazard Assessment from Storm Tides and Rainfall on a Tidal River Estuary

Here, we report on methods and results for a model-based flood hazard assessment we have conducted for the Hudson River from New York City to Troy/Albany at the head of tide. Our recent work showed that neglecting freshwater flows leads to underestimation of peak water levels at up-river sites and neglecting stratification (typical with two-dimensional modeling) leads to underestimation all along the Hudson. As a result, we use a three-dimensional hydrodynamic model and merge streamflows and storm tides from tropical and extratropical cyclones (TCs, ETCs), as well as wet extratropical cyclone (WETC) floods (e.g. freshets, rain-on-snow events). We validate the modeled flood levels and quantify error with comparisons to 76 historical events. A Bayesian statistical method is developed for tropical cyclone streamflows using historical data and consisting in the evaluation of (1) the peak discharge and its pdf as a function of TC characteristics, and (2) the temporal trend of the hydrograph as a function of temporal evolution of the cyclone track, its intensity and the response characteristics of the specific basin. A k-nearest-neighbors method is employed to determine the hydrograph shape. Out of sample validation tests demonstrate the effectiveness of the method. Thus, the combined effects of storm surge and runoff produced by tropical cyclones hitting the New York area can be included in flood hazard assessment. Results for the upper Hudson (Albany) suggest a dominance of WETCs, for the lower Hudson (at New York Harbor) a case where ETCs are dominant for shorter return periods and TCs are more important for longer return periods (over 150 years), and for the middle-Hudson (Poughkeepsie) a mix of all three flood events types is important. However, a possible low-bias for TC flood levels is inferred from a lower importance in the assessment results, versus historical event top-20 lists, and this will be further evaluated as these preliminary methods and results are finalized. Future funded work will quantify the influences of sea level rise and flood adaptation plans (e.g. surge barriers). It would also be valuable to examine how streamflows from tropical cyclones and wet cool-season storms will change, as this factor will dominate at upriver locations.

Hazard assessment↗

Data-driven upper bounds and event attribution for unprecedented heatwaves

The last decade has seen numerous record-shattering heatwaves in all corners of the globe. In the aftermath of these devastating events, there is interest in identifying worst-case thresholds or upper bounds that quantify just how hot temperatures can become. Generalized Extreme Value theory provides a data-driven estimate of extreme thresholds; however, upper bounds may be exceeded by future events, which undermines attribution and planning for heatwave impacts. Here, we show how the occurrence and relative probability of observed yet unprecedented events that exceed a priori upper bound estimates, so-called “impossible” temperatures, has changed over time. We find that many unprecedented events are actually within data-driven upper bounds, but only when using modern spatial statistical methods. Furthermore, there are clear connections between anthropogenic forcing and the “impossibility” of the most extreme temperatures. Robust understanding of heatwave thresholds provides critical information about future record-breaking events and how their extremity relates to historical measurements.

54 ENVIRONMENTAL SCIENCES↗

A Probabilistic Approach to Fitting Period–luminosity Relations and Validating Gaia Parallaxes

Pulsating stars, such as Cepheids, Miras, and RR Lyrae stars, are important distance indicators and calibrators of the “cosmic distance ladder,” and yet their period–luminosity–metallicity (PLZ) relations are still constrained using simple statistical methods that cannot take full advantage of available data. To enable optimal usage of data provided by the Gaia mission, we present a probabilistic approach that simultaneously constrains parameters of PLZ relations and uncertainties in Gaia parallax measurements. We demonstrate this approach by constraining PLZ relations of type ab RR Lyrae stars in near-infrared W 1 and W 2 bands, using Tycho- Gaia Astrometric Solution (TGAS) parallax measurements for a sample of ≈100 type ab RR Lyrae stars located within 2.5 kpc of the Sun. The fitted PLZ relations are consistent with previous studies, and in combination with other data, deliver distances precise to 6% (once various sources of uncertainty are taken into account). To a precision of 0.05 mas (1 σ ), we do not find a statistically significant offset in TGAS parallaxes for this sample of distant RR Lyrae stars (median parallax of 0.8 mas and distance of 1.4 kpc). With only minor modifications, our probabilistic approach can be used to constrain PLZ relations of other pulsating stars, and we intend to apply it to Cepheid and Mira stars in the near future.

79 ASTRONOMY AND ASTROPHYSICS↗

Confronting the Challenge of Modeling Cloud and Precipitation Microphysics

In the atmosphere, microphysics refers to the microscale processes that affect cloud and precipitation particles and is a key linkage among the various components of Earth’s atmospheric water and energy cycles. The representation of microphysical processes in models continues to pose a major challenge leading to uncertainty in numerical weather forecasts and climate simulations. In this paper, the problem of treating microphysics in models is divided into two parts: i) how to represent the population of cloud and precipitation particles, given the impossibility of simulating all particles individually within a cloud, and ii) uncertainties in the microphysical process rates owing to fundamental gaps in knowledge of cloud physics. The recently-developed Lagrangian particle-based method is advocated as a way to address several conceptual and practical challenges of representing particle populations using traditional bulk and bin microphysics parameterization schemes. For addressing critical gaps in cloud physics knowledge, sustained investment for observational advances from laboratory experiments, new probe development, and next-generation instruments in space is needed. Greater emphasis on laboratory work, which has apparently declined over the past several decades relative to other areas of cloud physics research, is argued to be an essential ingredient for improving process-level understanding. More systematic use of natural cloud and precipitation observations to constrain microphysics schemes is also advocated. Because it is generally difficult to quantify individual microphysical process rates from these observations directly, this presents an inverse problem that can be viewed from the standpoint of Bayesian statistics. Following this idea, a probabilistic framework is proposed that combines elements from statistical and physical modeling. Besides providing rigorous constraint of schemes, there is an added benefit of quantifying uncertainty systematically. Finally, a broader hierarchical approach is proposed to accelerate improvements in microphysics schemes, leveraging the advances described in this paper related to process modeling (using Lagrangian particle-based schemes), laboratory experimentation, cloud and precipitation observations, and statistical methods.

54 ENVIRONMENTAL SCIENCES↗

Non-linear Least Square Fitting Technique for the Determination of Field Line Resonance Frequency in Ground Magnetometer Data: Application to Remote Sensing of Plasmaspheric Mass Density

The accurate determination of the Field Line Resonance (FLR) frequency of a resonating geomagnetic field line is necessary to remotely monitor the plasmaspheric mass density during geomagnetic storms and quiet times alike. Under certain assumptions the plasmaspheric mass density at the equator is inversely proportional to the square of the FLR frequency. The most common techniques to determine the FLR frequency from ground magnetometer measurements are the amplitude ratio and phase difference techniques, both based on geomagnetic field observations at two latitudinally separated ground stations along the same magnetic meridian. Previously developed automated techniques have used statistical methods to pinpoint the FLR frequency using the amplitude ratio and phase difference calculations. We now introduce a physics-based automated technique, using non-linear least square fitting of the ground magnetometer data to the analytical resonant wave equations, that reproduces the wave characteristics on the ground, and from those determine the FLR frequency. One of the advantages of the new technique is the estimation of physics-based errors of the FLR frequency, and as a result of the equatorial plasmaspheric mass density. We present analytical results of the new technique, and test it using data from the Inner-Magnetospheric Array for Geospace Science (iMAGS) ground magnetometer chain along the coast of Chile and the east coast of the United States. We compare the results with the results of previously published statistical automated techniques.

A. Boudouridis↗

Evaluation Of Risk And Possible Mitigation Schemes For Previously Unidentified Hazards

This report presents the results of arc track testing conducted to determine if such a transfer of power to un-energized wires is possible and/or likely during an arcing event, and to evaluate an array of protection schemes that may significantly reduce the possibility of such a transfer. The results of these experiments may be useful for determining the level of protection necessary to guard against spurious voltage and current being applied to safety critical circuits. It was not the purpose of these experiments to determine the probability of the initiation of an arc track event only if an initiation did occur could it cause the undesired event: an inadvertent thruster firing. The primary wire insulation used in the Orbiter is aromatic polyimide, or Kapton , a construction known to arc track under certain conditions [3]. Previous Boeing testing has shown that arc tracks can initiate in aromatic polyimide insulated 28 volts direct current (VDC) power circuits using more realistic techniques such as chafing with an aluminum blade (simulating the corner of an avionics box or lip of a wire tray), or vibration of an aluminum plate against a wire bundle [4]. Therefore, an arc initiation technique was chosen that provided a reliable and consistent technique of starting the arc and not a realistic simulation of a scenario on the vehicle. Once an arc is initiated, the current, power and propagation characteristics of the arc depend on the power source, wire gauge and insulation type, circuit protection and series resistance rather than type of initiation. The initiation method employed for these tests was applying an oil and graphite mixture to the ends of a powered twisted pair wire. The flight configuration of the heater circuits, the fuel/oxider (or ox) wire, and the RCS jet solenoid were modeled in the test configuration so that the behavior of these components during an arcing event could be studied. To determine if coil activation would occur with various protection wire schemes, 145 tests were conducted using various fuel/ox wire alternatives (shielded and unshielded) and/or different combinations of polytetrafuloroethylene (PTFE), Mystik tape and convoluted wraps to prevent unwanted coil activation. Test results were evaluated along with other pertinent data and information to develop a mitigation strategy for an inadvertent RCS firing. The SSP evaluated civilian aircraft wiring failures to search for aging trends in assessing the wire-short hazard. Appendix 2 applies Weibull statistical methods to the same data with a similar purpose.

Linzey, William↗

Application of Hybrid Genetic Algorithm Routine in Optimizing Food and Bioengineering Processes

Optimization is a crucial step in the analysis of experimental results. Deterministic methods only converge on local optimums and require exponentially more time as dimensionality increases. Stochastic algorithms are capable of efficiently searching the domain space, however convergence is not guaranteed. This article demonstrates the novelty of hybrid genetic algorithm which combines both stochastic and deterministic routine for improved optimization results. A new hybrid genetic algorithm developed is applied to the Ackley benchmark function as well as case studies in foods, biofuels, and biotechnology processes. For each case study the hybrid genetic algorithm found a better optimum candidate than reported by the sources. In the case of food processing the hybrid genetic predicted 5% higher anthocyanin yield. Optimization of bio-oil production using HGA resulted in a 4.73 % higher yield. In enzyme production process HGA predicted 2.18 IU/gds of higher xylanase yield. In conclusion, hybridization of genetic algorithm with a deterministic algorithm resulted in maximum optimum compared to the statistical methods.

09 BIOMASS FUELS↗