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At least 451 records · Page 25

High-Throughput Field Plant Phenotyping: A Self-Supervised Sequential CNN Method to Segment Overlapping Plants

High-throughput plant phenotyping—the use of imaging and remote sensing to record plant growth dynamics—is becoming more widely used. The first step in this process is typically plant segmentation, which requires a well-labeled training dataset to enable accurate segmentation of overlapping plants. However, preparing such training data is both time and labor intensive. To solve this problem, we propose a plant image processing pipeline using a self-supervised sequential convolutional neural network method for in-field phenotyping systems. This first step uses plant pixels from greenhouse images to segment nonoverlapping in-field plants in an early growth stage and then applies the segmentation results from those early-stage images as training data for the separation of plants at later growth stages. The proposed pipeline is efficient and self-supervising in the sense that no human-labeled data are needed. We then combine this approach with functional principal components analysis to reveal the relationship between the growth dynamics of plants and genotypes. We show that the proposed pipeline can accurately separate the pixels of foreground plants and estimate their heights when foreground and background plants overlap and can thus be used to efficiently assess the impact of treatments and genotypes on plant growth in a field environment by computer vision techniques. This approach should be useful for answering important scientific questions in the area of high-throughput phenotyping.

59 BASIC BIOLOGICAL SCIENCES↗

Payloads simulation in the Shuttle Mission Training Facility

The Shuttle Mission Training Facility (SMFT) at the NASA Johnson Space Center is the primary facility for full mission training of astronauts. The training provided in the SMTF includes payload operations that are performed by the astronauts while the Space Shuttle is in orbit. This training requires real-time simulation of the operational aspects of Shuttle payloads as well as simulation of the interaction between payloads and the Orbiter. For this purpose the SMTF contains Payloads Simulators (PLS) that are coupled to and operated in synchronization with the Shuttle Vehicle Simulators. The PLS are used for simulating all payloads with the exception of the European Space Agency's Spacelab. The SMTF contains a separate Spacelab Simulator for training Spacelab astronauts. This paper provides a synopsis of actual payload operations, the methodology for payload simulation in the SMTF, and the system architecture of the PLS.

Hajare, Ankur R.↗

Path sampling of recurrent neural networks by incorporating known physics

Recurrent neural networks have seen widespread use in modeling dynamical systems in varied domains such as weather prediction, text prediction and several others. Often one wishes to supplement the experimentally observed dynamics with prior knowledge or intuition about the system. While the recurrent nature of these networks allows them to model arbitrarily long memories in the time series used in training, it makes it harder to impose prior knowledge or intuition through generic constraints. In this work, we present a path sampling approach based on principle of Maximum Caliber that allows us to include generic thermodynamic or kinetic constraints into recurrent neural networks. We show the method here for a widely used type of recurrent neural network known as long short-term memory network in the context of supplementing time series collected from different application domains. These include classical Molecular Dynamics of a protein and Monte Carlo simulations of an open quantum system continuously losing photons to the environment and displaying Rabi oscillations. Our method can be easily generalized to other generative artificial intelligence models and to generic time series in different areas of physical and social sciences, where one wishes to supplement limited data with intuition or theory based corrections.

59 BASIC BIOLOGICAL SCIENCES↗

Active learning strategy for high fidelity short-term data-driven building energy forecasting

The quality of a data-driven model is heavily dependent on the quality of data. Data from building operation often have data bias problems, which means that the data sample is collected in a way that some members of the intended data population are less likely to be included than others. Data-driven energy forecasting models built on such data hence are biased and could lead to large forecasting errors. Active learning—an effective method to defying data bias—is rarely studied or applied in the area of data-driven building energy forecasting modeling. This paper attempts to fill this gap and explores the application of active learning in data-driven building energy forecasting. The developed strategy in this paper efficiently generate informative training data within a time budget and uses block design to passively consider weather disturbances. The developed active learning strategy is applied and evaluated in both virtual and real-building testbeds against traditional data-driven methods. Via these virtual and real-building evaluation cases, we have demonstrated that the data bias problem typically exists in building operation data is resolved by applying the developed active learning strategy. Furthermore, building energy forecasting models trained from data generated from the active learning strategy have shown improved performances in both model accuracy and model extendibility perspectives. The effectiveness of the block design module is also validated to effectively consider the impact of weather conditions on active learning design.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Air Quality Research and Applications Using AURA OMi Data

The Ozone Monitoring Instrument (OMI) on EOS Aura is a new generation of satellite remote sensing instrument designed to measure trace gas and aerosol absorption at the UV and blue wavelengths. These measurements are made globally at urban scale resolution with no inter-orbital gaps that make them potentially very useful for air quality research, such as the determination of the sources and processes that affect global and regional air quality, and to develop applications such as air quality forecast. However, the use of satellite data for such applications is not as straight forward as satellite data have been for stratospheric research. There is a need for close interaction between the satellite product developers, in-situ measurement programs, and the air quality research community to overcome some of the inherent difficulties in interpreting data from satellite-based remote sensing instruments. In this talk we will discuss the challenges and opportunities in using OMI products for air quality research and applications. A key conclusion of this work is that to realize the full potential of OMI measurements it will be necessary to combine OMI data with data from instruments such as MLS, MODIS, AIRS, and CALIPSO that are currently flying in the "A-train" satellite constellation. In addition similar data taken by satellites crossing the earth at different local times than the A-train (e.g., the recently MetOp satellite) would need to be processed in a consistent manner to study diurnal variability, and to capture the effects on air quality of rapidly changing events such as wild fires.

Bhartia, P.K.↗

Self-supervised Representation Learning for Astronomical Images

Sky surveys are the largest data generators in astronomy, making automated tools for extracting meaningful scientific information an absolute necessity. We show that, without the need for labels, self-supervised learning recovers representations of sky survey images that are semantically useful for a variety of scientific tasks. These representations can be directly used as features, or fine-tuned, to outperform supervised methods trained only on labeled data. We apply a contrastive learning framework on multiband galaxy photometry from the Sloan Digital Sky Survey (SDSS), to learn image representations. We then use them for galaxy morphology classification and fine-tune them for photometric redshift estimation, using labels from the Galaxy Zoo 2 data set and SDSS spectroscopy. In both downstream tasks, using the same learned representations, we outperform the supervised state-of-the-art results, and we show that our approach can achieve the accuracy of supervised models while using 2-4 times fewer labels for training. The codes, trained models, and data can be found at https://portal.nersc.gov/project/dasrepo/self-supervised-learning-sdss.

79 ASTRONOMY AND ASTROPHYSICS↗

Prediction of vacancy defect diffusion paths in high entropy alloys via machine learning on molecular dynamics data

Identifying the diffusion path of point defects is a critical step in understanding their evolution and the mechanisms of related phenomena. Defect diffusion occurs at small length and time scales, with impacts on material properties that may continue to evolve over ns to μs, ms, and the continuum scale (s, min, etc., and cm, m, etc.). The time scale accessible to molecular dynamics (MD) simulations is limited by small step sizes, typically in the fs range. Thus, surrogate models of MD simulations through machine learning (ML)-based algorithms are of great interest, especially for complex systems such as high entropy alloys (HEAs). In this work, dynamics governing vacancy migration in HEA were approximated with graph convolutional network (GCN) models as ansatzes for kinetic Monte Carlo (KMC) rate catalogs. Network design considered that diffusion in crystalline solids generally depends on interactions between defects and their immediate neighbor atoms. Graphs represented the vacancy surroundings, MD-generated trajectories provided training and comparison datasets, and unsupervised GCN models approximated interatomic dynamics governing vacancy migration in HEAs as ansatzes for KMC. A proof-of-concept model trained on MD data for the Fe, Ni, Cr, Co, and Cu HEA environment was used with two different neighbor interactions to assess the feasibility of training a GCN to predict vacancy defect transition rates in the HEA environment. The resulting setup rapidly generated MD-formatted synthetic trajectories based on dynamics learned from the MD training set, with a time acceleration of roughly two orders of magnitude and a similar diffusion coefficient to MD observations. Additionally, Nudged Elastic Band (NEB) calculations were performed on randomly generated FeNiCrCoCu HEA structures to determine vacancy migration barriers across nearest-neighbor sites. Transition probabilities for each jump, categorized by atomic type, were extracted from these calculations. NEB-based and GCN-based approaches led to similar outcomes.

Reimer, C↗

Results of an International Space Crew Debrief

In order to identify potential multi-cultural and multinational problems for future International Space Station Freedom crew, a crew debrief questionnaire was developed for U.S. astronauts who flew on shuttle missions with one or more crew members from other countries. Methods: From 1981-90, a total of 20 U.S. astronauts flew on international space missions. Debriefs were mailed to all 20 with instructions not to identify themselves or their specific mission. The debrief focused primarily on preflight training and post flight incidents of misunderstanding, miscommunication, and interpersonal friction among crewmembers. Astronauts were also asked to rate the impact of the incident to the mission (low, medium, high). Results: Ten astronauts responded, but only nine responses were able to be scored, for a return rate of 45 percent. 42 incidents were reported, 9 in the preflight period, 26 inflight, and 7 in the postflight period. Most of the incidents were rated at a low or medium impact, but 5 of the inflight incidents were rated at a 'high' mission impact. A number of causes for the problems were listed, and are discussed. Conclusions: The debrief respondents provide useful and timely recommendations on preflight training which might help facilitate the integration of multinational crews and prevent multi-cultural or multinational factors from interfering with mission operations.

Santy, P. A.↗

A mathematical approach to using the forgetting curve to evaluate experience and training factors in human reliability analysis

Traditional human reliability analysis (HRA) methods have difficulty dealing with the dynamic nature of factors such as time and rely on static and expert-judgment-based assessments of performance-shaping factors (PSFs) across limited levels. In this study, we introduce a mathematical approach for dynamically evaluating the experience and training PSF. Our proposed method integrates the psychological concept of the “forgetting curve” to evaluate how PSFs are impacted by the number of trainings and the time elapsed since training. To confirm the validity of the model, we provide experimental data fitted by identifying the quantitative relationship between training and human performance. This research enables dynamic and objective assessments, thus reducing reliance on subjective expert judgment and improving the accuracy of HRA.

99 - GENERAL AND MISCELLANEOUS↗

Efficient Reinforcement Learning for Real-Time Hardware-Based Energy System Experiments: Preprint

In the context of urgent climate challenges and the pressing need for rapid technology development, Reinforcement Learning (RL) stands as a compelling data-driven method for controlling real-world physical systems. However, RL implementation often entails time-consuming and computationally intensive data collection and training processes, rendering them inefficient for real-time applications that lack non-real-time models. To address these limitations, real-time emulation techniques have emerged as valuable tools for the lab-scale rapid prototyping of intricate energy systems. While emulated systems offer a bridge between simulation and reality, they too face constraints, hindering comprehensive characterization, testing, and development. In this research, we construct a surrogate model using limited data from simulated systems, enabling an efficient and effective training process for a Double Deep Q-Network (DDQN) agent for future deployment. Our approach is illustrated through a hydropower application, demonstrating the practical impact of our approach on climate-related technology development.

deep Q-learning↗

Leveraging Observations of Untrained Panelists to Screen for Quality of Fresh-Cut Romaine Lettuce

Fresh-cut romaine lettuce’s high perishability challenges ready-to-eat (RTE) salad production. Selecting cultivars less prone to browning and decay is crucial for extending shelf life. Traditional quality evaluation methods using instrumentation and trained panelists are time-consuming and logistically complex. This study investigated the effectiveness of untrained volunteers in assessing fresh-cut romaine lettuce quality. Given that the average consumer in the USA is familiar with the flavor characteristics of romaine lettuce, this study proposed to investigate the value of having untrained volunteers discern the quality of fresh-cut romaine lettuce. Therefore, six romaine lettuce accessions (Green Forest, King Henry, Parris Island Cos, PI 491224, SM13-R2, and Sun Valley) were assessed for sensory quality attributes (browning, green color, decay, and overall quality) and compared with instrumentation analyses (gas composition including O2 and CO2, electrolyte leakage, and color). The results showed significant quality differences (p < 0.05) among the accessions, with some seasonal variability. Very importantly, the consumers’ (n = 159) assessments revealed similar results to those produced by either instrumentation or a trained panel. The consumers provided sensory scores that allowed for the grouping of accessions based on their postharvest quality, which efficiently matched their pedigree relationship. In conclusion, ad hoc consumer panels can be an effective way to characterize the quality of romaine lettuce for RTE salads.

Agriculture↗

Differentiable Multiphysics Codes: A Breakthrough Technology for Simulation and Computing

This document summarizes the findings of a strategic planning exercise commissioned by the Weapons Simulation and Computing, Computational Physics (WSC/CP) program at the Lawrence Livermore National Laboratory (LLNL) in FY24. During the year, the committee met with multiple stakeholder communities to gather input, opinions, suggestions and concerns which have been incorporated throughout this document. The key findings from this exercise are summarized: • The development of multiphysics modelling and simulation (mod/sim) codes and software technologies, their deployment on exascale compute platforms, and their broad adoption across the NNSA is a major success of the Advanced Simulation and Computing (ASC) program and the Exascale Computing Project (ECP). Sustained investment in these core technologies is essential. • Today’s state of the art involves running ensembles of O(100K) simulations to perform uncertainty quantification (UQ) and design studies using multiple statistical methods such as Bayesian optimization to understand sensitivities of our models and explore parameterized design spaces. Even with exascale computing, we are practically limited to O(10) parameters in these studies since the number of simulations required to sample the space scales exponentially with the number of design parameters. • The data from these simulation ensembles is increasingly being used to train machine learned (ML) surrogates (or reduced order models, ROMs) which can then be used for optimization or real time design exploration. However, the trained surrogates are still limited in the number of parameters they can represent due to the sampling limitations previously noted. • Augmenting our suite of integrated multiphysics simulation codes, both current and emerging, with the ability to compute gradients (solution derivatives) of arbitrary simulation outputs with respect to (some or all) simulation inputs would be a breakthrough technology, opening the door to a new era of efficient and automated inverse design based on verified and validated mod/sim capabilities. • This capability, which we refer to as differentiable multiphysics codes (DMCs), would revolutionize both UQ and optimization studies by breaking the curse of dimensionality that presently limits our “gradient-free” ensemble based computing approach. A similar breakthrough occurred in the AI/ML community once the ability to compute gradients of arbitrary loss functions using back-propagation became commonplace. Gradient information from the multiphysics codes can also be used to dramatically improve the efficiency and scale of training of ML/ROM surrogates for rapid assessments. • Achieving this in our suite of codes will be a grand challenge, similar to the amount of effort that was required to transition from CPU to GPU computing. It will require buy-in from the entire WSC/CP program and beyond, including all integrated codes, physics and engineering models, third-party library dependencies and performance portability abstractions. It will also require investment in research and development of numerical methods for computing adjoints of coupled physics across multiple adaptively refined moving meshes and of stochastic (Monte Carlo) and mesh free (SPH) methods. • New software and numerical techniques, largely pioneered by the AI/ML community, make this feasible. Chief among these is automatic differentiation (AD), the ability to employ AD at point-wise locations in a physics calculation (instead of traditional black-box approaches) and the ability to perform “back-propagation in time” (or reverse mode AD) for non-linear partial differential equations (PDEs). Fundamentally, the conclusion of this strategic planning exercise is that the time is right to undertake a large scale effort in WSC, centered on the existing integrated codes, to continue the natural evolution of mod/sim in the age of AI/ML. Instead of attempting to replace mod/sim with purely data driven AI/ML models, we believe the key to success is to integrate AI/ML by building on top of the decades of hard-won knowledge and the verified/validated multiphysics modelling capability that is the hallmark of the ASC program.

97 MATHEMATICS AND COMPUTING↗

Training for Mars

Spaceflight training for Apollo era and Space Shuttle missions was designed to train crew on specific tasks for their short duration missions. The training mottos included "practice, practice, practice" and "hammering it in." However, training for longer duration ISS (International Space Station) missions has been more challenging. There is clear documentation that tasks and skills trained pre-flight are not all retained throughout the mission, and this lack of training retention is augmented with real-time ground support. NASA does not currently have a training design that supports semi-autonomous to autonomous mission operations. The current design of a manned Mars mission calls for a 32-month long mission and asynchronous communication involving long delays.

Barshi, Immanuel↗

Pre-training Vision Models for the Classification of Alerts from Wide-field Time-domain Surveys

Modern wide-field time-domain surveys facilitate the study of transient, variable and moving phenomena by conducting image differencing and relaying alerts to their communities. Machine learning tools have been used on data from these surveys and their precursors for more than a decade, and convolutional neural networks (CNNs), which make predictions directly from input images, saw particularly broad adoption through the 2010s. Since then, continually rapid advances in computer vision have transformed the standard practices around using such models. It is now commonplace to use standardized architectures pre-trained on large corpora of everyday images (e.g., ImageNet). In contrast, time-domain astronomy studies still typically design custom CNN architectures and train them from scratch. Here, we explore the effects of adopting various pre-training regimens and standardized model architectures on the performance of alert classification. We find that the resulting models match or outperform a custom, specialized CNN like what is typically used for filtering alerts. Moreover, our results show that pre-training on galaxy images from Galaxy Zoo tends to yield better performance than pre-training on ImageNet or training from scratch. We observe that the design of standardized architectures are much better optimized than the custom CNN baseline, requiring significantly less time and memory for inference despite having more trainable parameters. On the eve of the Legacy Survey of Space and Time and other image-differencing surveys, these findings advocate for a paradigm shift in the creation of vision models for alerts, demonstrating that greater performance and efficiency, in time and in data, can be achieved by adopting the latest practices from the computer vision field.

79 ASTRONOMY AND ASTROPHYSICS↗

Water4Energy Step-1 Band-M Ready-to-Train Samples for TVA Weeks-to-Years Prediction, Version 0

AI-ready Band-M (monthly) labelled training pack for the Water4Energy Genesis Task-1 project on weeks-to-years prediction of Tennessee Valley temperature and precipitation. The deposit includes leakage-aware issue-time samples (samples_M_v0.nc; N=486), train-only scalers, issue-time split table, supporting monthly panels, and Python generation scripts to recreate the pack from the companion Tier-1 raw observation collection (https://doi.org/10.13139/ORNLNCCS/3398576). Each sample pairs a 12-month lookback of teleconnection indices and SST box anomalies with TVA-mean ERA5 anomaly targets (t2m, tp, msl) at leads 1–3 months.

54 ENVIRONMENTAL SCIENCES↗

Can Machine Learning Reveal Precursors of Reversals of the Geomagnetic Axial Dipole Field?

It is well known that the axial dipole part of Earth’s magnetic field reverses polarity, so that the magnetic North Pole becomes the South Pole and vice versa. The timing of reversals is well documented for the past 160 Myr, but the conditions that lead to a reversal are still not well understood. It is not known if there are reliable ‘precursors’ of reversals (events that indicate that a reversal is upcoming) or what they might be. We investigate if machine learning (ML) techniques can reliably identify precursors of reversals based on time-series of the axial magnetic dipole field. The basic idea is to train a classifier using segments of time-series of the axial magnetic dipole. This training step requires modification of standard ML techniques to account for the fact that we are interested in rare events—a reversal is unusual, while a non-reversing field is the norm. Without our tweak, the ML classifiers lead to useless predictions. Perhaps even more importantly, the usable observational record is limited to 0–2 Ma and contains only five reversals, necessitating that we determine if the data are even sufficient to reliably train and validate an ML algorithm. To answer these questions we use several ML classifiers (linear/non-linear support vector machines and long short-term memory networks), invoke a hierarchy of numerical models (from simplified models to 3-D geodynamo simulations), and two palaeomagnetic reconstructions (PADM2M and Sint-2000). The performance of the ML classifiers varies across the models and the observational record and we provide evidence that this is not an artefact of the numerics, but rather reflects how ‘predictable’ a model or observational record is. Studying models of Earth’s magnetic field via ML classifiers thus can help with identifying shortcomings or advantages of the various models. For Earth’s magnetic field, we conclude that the ability of ML to identify precursors of reversals is limited, largely due to the small amount and low frequency resolution of data, which makes training and subsequent validation nearly impossible. Put simply: the ML techniques we tried are not currently capable of reliably identifying an axial dipole moment (ADM) precursor for geomagnetic reversals. This does not necessarily imply that such a precursor does not exist, and improvements in temporal resolution and length of ADM records may well offer better prospects in the future.

Kyle Gwirtz↗

Design and analysis of optimal pre-cooling in residential buildings

Existing pre-cooling strategies provide a means of shifting or reducing the peak demand and/or energy cost in residential buildings. However, majority of them are rule-based and therefore may not be optimal in terms of cost saving, leaving room for improvement. In this paper, an integer linear programming problem that accounts for the thermal properties of a specific home, HVAC system capacity, utility rate structure, and weather conditions and makes use of a home thermal model is formulated. This problem determines the HVAC on/off control signal that minimizes the 24-h energy cost while maintaining thermal comfort and calculates the corresponding optimal indoor air temperature. The model is constructed using home thermal properties identified via data training in real-time. Through simulation, the energy performance of the proposed optimal pre-cooling strategy is investigated and compared with three rule-based operation strategies from the literature. It is found that the optimal strategy requires the least energy consumption without sacrificing thermal comfort. The superb energy performance of the optimal strategy is attributed to a longer runtime of the HVAC system in cool outdoor air conditions and to the elimination of deadband in HVAC operation, which is required by the rule-based strategies, to allow the indoor air temperature to stay near the thermal comfort upper bound as much as possible. In terms of energy cost, the rule-based operation strategies require 3.52, 1.90, and 2.79, respectively, while the optimal strategy only requires 1.52. These figures represent a saving of 56.82%, 20.00%, and 45.52%, respectively. The results suggest that the optimal strategy is indeed significantly more effective than the existing rule-based operation strategies.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Progressive transfer learning for advancing machine learning-based reduced-order modeling

Abstract To maximize knowledge transfer and improve the data requirement for data-driven machine learning (ML) modeling, a progressive transfer learning for reduced-order modeling (p-ROM) framework is proposed. A key concept of p-ROM is to selectively transfer knowledge from previously trained ML models and effectively develop a new ML model(s) for unseen tasks by optimizing information gates in hidden layers. The p-ROM framework is designed to work with any type of data-driven ROMs. For demonstration purposes, we evaluate the p-ROM with specific Barlow Twins ROMs (p-BT-ROMs) to highlight how progress learning can apply to multiple topological and physical problems with an emphasis on a small training set regime. The proposed p-BT-ROM framework has been tested using multiple examples, including transport, flow, and solid mechanics, to illustrate the importance of progressive knowledge transfer and its impact on model accuracy with reduced training samples. In both similar and different topologies, p-BT-ROM achieves improved model accuracy with much less training data. For instance, p-BT-ROM with four-parent (i.e., pre-trained models) outperforms the no-parent counterpart trained on data nine times larger. The p-ROM framework is poised to significantly enhance the capabilities of ML-based ROM approaches for scientific and engineering applications by mitigating data scarcity through progressively transferring knowledge.

97 MATHEMATICS AND COMPUTING↗