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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 451 records · Page 25
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

The smallest functional antibody fragment: Ultralong CDR H3 antibody knob regions potently neutralize SARS-CoV-2

Cows produce antibodies with a disulfide-bonded antigen-binding domain embedded within ultralong heavy chain third complementarity determining regions. This “knob” domain is analogous to natural cysteine-rich peptides such as knottins in that it is small and stable but can accommodate diverse loops and disulfide bonding patterns. We immunized cattle with SARS-CoV-2 spike and found ultralong CDR H3 antibodies that could neutralize several viral variants at picomolar IC 50 potencies in vitro and could protect from disease in vivo. The independent CDR H3 peptide knobs were expressed and maintained the properties of the parent antibodies. The knob interaction with SARS-CoV-2 spike was revealed by electron microscopy, X-ray crystallography, NMR spectroscopy, and mass spectrometry and established ultralong CDR H3-derived knobs as the smallest known recombinant independent antigen-binding fragment. Unlike other vertebrate antibody fragments, these knobs are not reliant on the immunoglobulin domain and have potential as a new class of therapeutics.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Detection efficiency of a water condensation particle counter using electrically neutral sulfuric acid and sulfuric acid-dimethylamine clusters

Recent advances in condensation particle counters (CPCs) have improved the detection of sub-3 nm particles, increasing the accuracy of new particle formation (NPF) measurements. However, the detection efficiencies for neutrally charged, atmospherically relevant, sub-1 nm particles, which are critical for the accurate derivation of atmospheric NPF rates, are currently unknown. Here, this study presents a method to measure the detection efficiency of sulfuric acid and clusters of sulfuric acid and dimethylamine using measured CPC concentrations and modeled cluster distributions at atmospherically relevant concentrations. This study finds that water-based CPCs can measure these clusters at detection efficiencies relevant to NPF studies.

Cheng, Darren [Carnegie Mellon Univ., Pittsburgh, ↗
DOE OSTI2020

Discovery and characterization of a neutralizing pan-ELR+CXC chemokine monoclonal antibody

CXCR1 and CXCR2 signaling play a critical role in neutrophil migration, angiogenesis, and tumorigenesis and are therefore an attractive signaling axis to target in a variety of indications. In human, a total of seven chemokines signal through these receptors and comprise the ELR + CXC chemokine family, so named because of the conserved ELRCXC N-terminal motif. To fully antagonize CXCR1 and CXCR2 signaling, an effective therapeutic should block either both receptors or all seven ligands, yet neither approach has been fully realized clinically. In this work, we describe the generation and characterization of LY3041658, a humanized monoclonal antibody that binds and neutralizes all seven human and cynomolgus monkey ELR + CXC chemokines and three of five mouse and rat ELR+CXC chemokines with high affinity. LY3041658 is able to block ELR + CXC chemokine-induced Ca 2+ mobilization, CXCR2 internalization, and chemotaxis in vitro as well as neutrophil mobilization in vivo without affecting other neutrophil functions. In addition to the in vitro and in vivo activity, we characterized the epitope and structural basis for binding in detail through alanine scanning, crystallography, and mutagenesis. Together, these data provide a robust preclinical characterization of LY3041658 for which the efficacy and safety is being evaluated in human clinical trials for neutrophilic skin diseases.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Friction in a strongly magnetized neutral plasma

A charged projectile generates an electrostatic wake as it moves through a background plasma. This wake normally gives rise to a drag force that acts antiparallel to the velocity vector of the projectile, and is commonly referred to as the stopping power. A recent theory predicted that an additional component of the friction force that is perpendicular to both the projectile velocity and the Lorentz force arises when a plasma is strongly magnetized. We extend the previous analysis of this transverse friction force, which was based on the one-component plasma model, to treat a two-component charge-neutral electron-ion plasma. The direction and magnitude of the transverse force is found to depend on the projectile speed relative to the electron and ion thermal velocities, and to change sign three times. For projectile speeds below a certain threshold, the transverse force is dominated by collisions with ions, while above this threshold, only electron collisions contribute. Here, the average trajectory of the projectile is significantly altered by the transverse force as it slows.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2023

Effect of the neutral beam injector operational regime on the Alfven eigenmode saturation phase in DIII-D plasma

The aim of this study is to analyze the effect of the neutral beam injector (NBI) operation regime on the saturation phase of the Alfven Eigenmodes (AEs) in DIII-D plasma. Here, the analysis is done using the linear and nonlinear versions of the gyro-fluid code FAR3d. A set of parametric analyses are performed modifying the nonlinear simulation EP $β$ (NBI injection power), EP energy (NBI voltage) and the radial location of the EP density profile gradient (NBI radial deposition). The analysis indicates a transition from the soft (local plasma relaxation) to the hard MHD (global plasma relaxation) limit if the simulation EP $β$ $\unicode{x2A7E}$ $0.02$, leading to bursting MHD activity caused by radial AEs overlapping. MHD bursts cause an enhancement of the EP transport showing ballistic-like features as avalanche-like events. Simulations in the soft MHD limit show an increment of the EP density gradient as the EP $β$ increases. On the other hand, there is a gradient upper limit in the hard MHD limit, consistent with the critical-gradient behavior. AEs induce shear flows and zonal current leading to the deformation of the flux surfaces and the safety factor profile, respectively, particularly strong for the simulation in the hard MHD limit. Simulations in the hard MHD regime show a decrease of the AE frequency in the saturation phase; this is caused by the destabilization of a transitional mode between a $9/3-10/3$ TAE and a $9/3$ RSAE that may explain the AE frequency down-sweeping observed in some DIII-D discharges. Reducing the EP energy in the nonlinear simulations leads to a weakening of the plasma perturbation. On the other hand, increasing the EP energy causes the opposite effect. Nonlinear simulations of off-axis NBI profiles indicate a lower plasma perturbation as the EP density gradient is located further away from the magnetic axis.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2023

Visualization of phase-space orbit topological boundary using imaging neutral particle analyzer

A newly-developed imaging neutral particle analyzer (INPA) in the DIII-D tokamak interrogates phase space occupied by fast ions on multiple different orbit topologies, including passing, stagnation, trapped and potato orbits. Depending on plasma parameters and beam injection geometries, this new INPA system is capable of visualizing distributions of fast ions on the selected orbit topology and its associated orbit topology boundaries. More importantly, the system is able to directly visualize the pitch angle scattering process in phase space by measuring fast ions that are scattered across the trapped-passing orbit topology boundaries. It also enables visualization of fast ion confined-loss boundaries, which are determined by particle energy, plasma current and magnetic field.The key goal of this new INPA system is to directly measure pitch angle scattering across phase space induced by drift waves and its interaction with Alfv'en eigenmodes, i.e., a key issue towards \redit{a} future fusion power plant.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2025

On the role of ion temperature gradient turbulence in driving ion thermal transport in neutral beam injection-heated L-mode plasmas in a superconducting tokamak

In this paper, we report a detailed experimental study of the role of ion-temperature-gradient driven turbulence in driving ion thermal transport in neutral beam injection (NBI)-heated L-mode plasmas in Experimental Advanced Superconducting Tokamak (EAST) (Wan et al 2000 Nucl. Fusion 40 1057) coupled with linear and nonlinear gyrokinetic simulations. Significant ion-scale turbulence k ⟂ < cm −1 (k ⟂ < 1.5, where k ⟂ where is the perpendicular wavenumber and ρ s is the ion gyroradius calculated using local electron temperature T e ), measured with a microwave reflectometer, is observed in the plasma core at for r/a ≈ 0.265 and 0.5 (where r is half the diameter of the closed flux surface at a given radial position, and a is half the diameter of the last closed flux surface). Local linear stability analysis with experimental equilibrium quantities at these two radial locations using the GS2 gyrokinetic code shows that the most unstable ion-scale micro-instability is the ion temperature gradient (ITG) mode. Since the computed maximum ion-scale linear growth rates are larger than the local Waltz-Miller E × B shearing rate (Waltz and Miller 1999 Phys. Plasmas 6 4265), the E × B shear is unable to suppress ion-scale turbulence, consistent with the experimental observation of ion-scale turbulence. Experimental ion and electron thermal transports, calculated with power balance analysis, are both anomalous with ion thermal transport being the dominant channel. Nonlinear gyrokinetic simulations using the electrostatic global particle-in-cell gyrokinetic tokamak simulation (GTS) code (Weixing Wang et al 2010 Phys. Plasmas 17 072511) show good quantitative agreement between predicted ion thermal transport and that from the power balance analysis. These results demonstrate for the first time the important role of ITG turbulence in driving thermal transport in NBI-heated L-mode plasmas in EAST, showing the effectiveness of GTS code in simulating electrostatic turbulence in EAST and the need of suppressing ITG turbulence to improve energy confinement in EAST.

Sun, P. J. [Chinese Academy of Sciences (CAS), Hef↗
DOE OSTI2025

Feasibility of fusion plasma burn control via real-time, sub-divertor neutral gas isotopic and compositional analysis

The ability to provide fusion burn control without requiring physical access through the first wall and fuel breeding blankets, would be vital for any future, magnetically confined fusion power reactor. A multi-sensor, fusion fuel cycle exhaust, neutral gas analysis system on JET, capable of delivering real time data, and accessing only the sub-divertor region, provides an excellent example of such capability. Optimized for and operated during the deuterium–tritium experimental campaigns 2 and 3 (DTE2, DTE3), it is proving valuable for planning to explore fusion reactor burn control in ITER with a comparable diagnostic system called the Diagnostic Residual Gas Analyzer (DRGA). This paper aims to show feasibility of developing model-based controllers for ITER and next generation, reactor-relevant devices, by building both on the empirical experience in JET-DTE2, and on the already emerging experience on developing such models specifically for ITER. The paper begins with a specific use-case from JET-DTE2, pertaining to the observed sensitivity of the fusion neutron yield on the concentration of isotopic helium-3 ( 3 He), with data from one of the high-performance DT shots exhibited with emphasis on the 3 He measurement via the sub-divertor. Then, a first model is developed and then explored with simulations that aim to discover how well the controllers in the model react to either insufficient levels of 3 He or excessive levels of 3 He. The simulations then explore potential impact from a delay in the measurement (or the response) that would be comparable to the ∼1 s, conductance limited response for the ITER DRGA system, currently in its final design. The simulations show that control is feasible, and that its effectiveness is not significantly impacted by such delay.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2026

Upgrade and characterization of the fast-channels of Imaging Neutral Particle Analyzers in the DIII-D tokamak

This publication presents the characterization of the recently upgraded fast (MHz) channels of the DIII-D Imaging Neutral Particle Analyzers. The new system allows for a phase space resolution of < 10 keV and < 10 cm. The main source of noise is due to the background radiation (neutrons and gammas) present in the diagnostic lab during experiments, which can hit the photomultipliers and generate large spikes in signal. Good linear correlations (r 2 > 0.9) are found between the average rate of noise spikes in the fast channels and the average neutron rate. Additional noise is caused by the scintillation of the optical fibers used to guide the signal to the acquisition system, which is induced by neutron and gamma impacts. A correlation factor r 2 > 0.6 between the baseline noise caused by this scintillation and the signals in the neutron diagnostic was found. Possible mitigation strategies, such as the use of shielding and filters, are discussed. These allow to reduce the noise spike rate by an order of magnitude and the noise baseline by a factor 4. Despite the noise, it is shown that the upgraded fast channels provide enough signal-to-noise ratio to observe coherent fluctuations of the energetic particle population.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Provincial-scale assessment of direct air capture to meet China’s climate neutrality goal under limited bioenergy supply

China has large, estimated potential for direct air carbon capture and storage (DACCS) but its deployment locations and impacts at the subnational scale remain unclear. This is largely because higher spatial resolution studies on carbon dioxide removal (CDR) in China have focused mainly on bioenergy with carbon capture and storage. This study uses a spatially detailed integrated energy-economy-climate model to evaluate DACCS for 31 provinces in China as the country pursues its goal of climate neutrality by 2060. We find that DACCS could expand China’s negative emissions capacity, particularly under sustainability-minded limits on bioenergy supply that are informed by bottom-up studies. But providing low-carbon electricity for multiple GtCO 2 yr -1 DACCS may require over 600 GW of additional wind and solar capacity nationwide and comprise up to 30% of electricity demand in China’s northern provinces. Investment requirements for DACCS range from 330 to 530 billion dollars by 2060 but could be repaid manyfold in the form of avoided mitigation costs, which DACCS deployment could reduce by up to $6 trillion over the same period. Enhanced efforts to lower residual CO 2 emissions that must be offset with CDR under a net-zero paradigm reduce but do not eliminate the use of DACCS for mitigation. For decision-makers and the energy-economy models guiding them, our results highlight the value of expanding beyond the current reliance on biomass for negative emissions in China.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

HIResist: a database of HIV-1 resistance to broadly neutralizing antibodies

Changing the course of the human immunodeficiency virus type I (HIV-1) pandemic is a high public health priority with approximately 39 million people currently living with HIV-1 (PLWH) and about 1.5 million new infections annually worldwide. Broadly neutralizing antibodies (bnAbs) typically target highly conserved sites on the HIV-1 envelope glycoproteins (Envs), which mediate viral entry, and block the infection of diverse HIV-1 strains. But different mechanisms of HIV-1 resistance to bnAbs prevent robust application of bnAbs for therapeutic and preventive interventions. Here we report the development of a new database that provides data and computational tools to aid the discovery of resistant features and may assist in analysis of HIV-1 resistance to bnAbs. Bioinformatic tools allow identification of specific patterns in Env sequences of resistant strains and development of strategies to elucidate the mechanisms of HIV-1 escape; comparison of resistant and sensitive HIV-1 strains for each bnAb; identification of resistance and sensitivity signatures associated with specific bnAbs or groups of bnAbs; and visualization of antibody pairs on cross-sensitivity plots. The database has been designed with a particular focus on user-friendly and interactive interface. Our database is a valuable resource for the scientific community and provides opportunities to investigate patterns of HIV-1 resistance and to develop new approaches aimed to overcome HIV-1 resistance to bnAbs.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

The distribution of neutral hydrogen in the colour–magnitude plane of galaxies

ABSTRACT We present the conditional H i (neutral hydrogen) mass function (HIMF) conditioned on observed optical properties, Mr (r-band absolute magnitude), and Cur (u − r colour), for a sample of 7709 galaxies from Arecibo Legacy Fast ALFA (40 per cent data release – α.40) which overlaps with a common volume in SDSS DR7. Based on the conditional HIMF, we find that the luminous red, luminous blue, and faint blue populations dominate the total HIMF at the high-mass end, knee, and the low-mass end, respectively. We use the conditional HIMF to derive the underlying distribution function of ΩH i (H i density parameter), p(ΩH i), in the colour–magnitude plane of galaxies. The distribution, p(ΩH i), peaks in the blue cloud at $\mathit{ M_{{r}}}^{\text{max}}=-19.25, \mathit{ C_{{ur}}}^{\text{max}}=1.44$ but is skewed. It has a long tail towards faint blue galaxies, and luminous red galaxies. We argue that p(ΩH i) can be used to reveal the underlying relation between cold gas, stellar mass, and the star formation rate in an unbiased way, that is, the derived relation does not suffer from survey or sample selection.

Dutta, Saili (ORCID:0000000288585845)↗
DOE OSTI2024

CRISPR-COPIES: an in silico platform for discovery of neutral integration sites for CRISPR/Cas-facilitated gene integration

Abstract The CRISPR/Cas system has emerged as a powerful tool for genome editing in metabolic engineering and human gene therapy. However, locating the optimal site on the chromosome to integrate heterologous genes using the CRISPR/Cas system remains an open question. Selecting a suitable site for gene integration involves considering multiple complex criteria, including factors related to CRISPR/Cas-mediated integration, genetic stability, and gene expression. Consequently, identifying such sites on specific or different chromosomal locations typically requires extensive characterization efforts. To address these challenges, we have developed CRISPR-COPIES, a COmputational Pipeline for the Identification of CRISPR/Cas-facilitated intEgration Sites. This tool leverages ScaNN, a state-of-the-art model on the embedding-based nearest neighbor search for fast and accurate off-target search, and can identify genome-wide intergenic sites for most bacterial and fungal genomes within minutes. As a proof of concept, we utilized CRISPR-COPIES to characterize neutral integration sites in three diverse species: Saccharomyces cerevisiae, Cupriavidus necator, and HEK293T cells. In addition, we developed a user-friendly web interface for CRISPR-COPIES (https://biofoundry.web.illinois.edu/copies/). We anticipate that CRISPR-COPIES will serve as a valuable tool for targeted DNA integration and aid in the characterization of synthetic biology toolkits, enable rapid strain construction to produce valuable biochemicals, and support human gene and cell therapy applications.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Enhanced search for neutral current Δ radiative single-photon production in MicroBooNE

We report results from an updated search for neutral current (NC) resonant Δ⁡(1232) baryon production and subsequent Δ radiative decay (NC Δ → 𝑁⁢𝛾). We consider events with and without final state protons; events with a proton can be compared with the kinematics of a Δ⁡(1232) baryon decay, while events without a visible proton represent a more generic phase space. In order to maximize sensitivity to each topology, we simultaneously make use of two different reconstruction paradigms, Pandora and Wire-Cell, which have complementary strengths, and select mostly orthogonal sets of events. Considering an overall scaling of the NC Δ → 𝑁⁢𝛾 rate as an explanation of the MiniBooNE anomaly, our data exclude this hypothesis at 94.4% CL. When we decouple the expected correlations between NC Δ → 𝑁⁢𝛾 events with and without final state protons, our data exclude an interpretation in which all excess events have associated protons at 2.0⁢𝜎, and are consistent with an interpretation in which all excess events have no associated protons at 0.63⁢𝜎.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2026

Search for a heavy neutral lepton with the MAGNETO-𝜈 experiment using 241 Pu 𝛽 − decays

The MAGNETO-𝜈 experiment searches for keV-scale heavy neutral leptons (HNLs) through precise measurements of the 𝛽 − -decay spectrum of 241 Pu. We present spectra comprising a total of 194 million 𝛽 − decays recorded using decay energy spectrometry with metallic magnetic calorimeters, representing the most statistically precise measurement of 241 Pu 𝛽 − decay to date. The 𝛽-endpoint energy was determined using 𝛾 rays and x-rays from an external 133 Ba calibration source, yielding 𝑄 𝛽 = 22.273⁢ (33) ⁢keV. The measured spectrum shows no statistically significant deviation from the allowed 𝛽-decay model. From a subset of the high-statistics data, we set an upper limit on the mixing of an 11.5-keV HNL with the electron neutrino, |𝑈 𝑒⁢4 | 2 < 1.31 × 10 −3 at the 95% confidence level.

A ≥ 220↗
DOE OSTI2025

First Differential Measurement of the Single 𝜋 + Production Cross Section in Neutrino Neutral-Current Scattering

Since its first observation in the 1970s, neutrino-induced neutral-current single positive pion production (NC⁢1⁢𝜋 + ) has remained an elusive and poorly understood interaction channel. This process is a significant background in neutrino oscillation experiments and studying it further is critical for the physics program of next-generation accelerator-based neutrino oscillation experiments. In this Letter, we present the first double-differential cross-section measurement of NC⁢1⁢𝜋 + interactions using data from the ND280 detector of the T2K experiment collected in 𝜈-beam mode. The measured flux-averaged integrated cross section is 𝜎 = (6.07 ± 1.22) × 10 −41 cm 2 /nucleon. We compare the results on a hydrocarbon target to the predictions of several neutrino interaction generators and final-state-interaction models. While model predictions agree with the differential results, the data show a weak preference for a cross-section normalization approximately 30% higher than predicted by most models studied in this Letter.

Neutrino detection↗
DOE OSTI2025

Modeling neutral defects in III-V ternary alloys with a special quasirandom structure: Analysis of As- and III-site point defects in InGaAs

While first-principles density functional theory modeling has become a vital tool to investigate defect properties in semiconductors, the lack of crystalline periodicity in pseudobinary random composition alloys, such as In 1−𝑥 ⁢Ga 𝑥 ⁢As, complicates such analyses. We present a simulation strategy to systematically take into account the variability in the local defect environment in order to predict statistical properties of neutral intrinsic defects in In 1−𝑥⁢ Ga 𝑥 ⁢As. We use a comprehensive sampling from a modest-sized 64-atom special quasirandom structure (SQS) to define a statistically representative set of defects, and use a 512-atom hypercell, a 2 × 2 × 2 supercell of SQS supercells, to achieve cell-size convergence. We articulate an equivalent site principle and describe how it constrains atomic chemical reference energies in computation of defect formation energies in pseudobinary alloys. A simple protocol for estimating reference energies for the Ga and In atoms sharing the III site succeeds in obtaining the equivalence of defects at Ga-sites and In sites in the SQS supercell, (<30 meV differences in average formation energies). For III-site defects, such as the As antisite As III , the statistical variability in formation energies is modest, ≈ 0.1–0.2 eV. The variability in formation energy at As-site defects, such as the As vacancy 𝑣 As , can be much larger, >1 eV. The As antisite is shown to be a low-energy defect and the most likely to be present in as-grown materials, just as in GaAs. All other defects are higher-energy defects unlikely to be important in native material, but potentially important in radiation-damaged material. With a strong variability in defect energies, especially on the As-site, explicit consideration of statistical variability due to compositional randomness will be imperative for meaningful and quantitative comparisons to experiment.

Density functional theory↗
DOE OSTI2026

Probing axionlike particles near the neutral pion mass with KOTO data

We demonstrate that novel limits on prompt axionlike particles (ALPs) in the hard-to-probe mass range near the neutral pion—the so-called pion chimney—may be obtained from recasting 𝐾 𝐿 → 3⁢𝜋 0 → 6⁢𝛾 data taken by the J-PARC KOTO experiment, to search for 𝐾 𝐿 → 2⁢𝜋 0⁢ 𝑎 → 6⁢𝛾. We also explore the power of KOTO 6⁢𝛾 data to probe 𝐾 𝐿 → 2⁢𝜋 0 ⁢𝑎 for a broader range of ALP masses, incorporating displaced decays.

Balkin, Reuven [University of California, Santa Cr↗