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At least 451 records · Page 25

DONUT: Physics-aware Machine Learning for Real-time X-ray Nanodiffraction Analysis

SF-25-088 Coherent X-ray scattering techniques are critical for investigating the fundamental structural properties of materials at the nanoscale. While advancements have made these experiments more accessible, real-time analysis remains a significant bottleneck, often hindered by artifacts and computational demands. In scanning X-ray nanodiffraction microscopy, which is widely used to spatially resolve structural heterogeneities, this challenge is compounded by the convolution of the divergent beam with the sample’s local structure. To address this, we introduce DONUT (Diffraction with Optics for Nanobeam by Unsupervised Training), a physics-aware neural network designed for the rapid and automated analysis of nanobeam diffraction data. By incorporating a differentiable geometric diffraction model directly into its architecture, DONUT learns to predict crystal lattice strain and orientation in real-time. Crucially, this is achieved without reliance on labeled datasets or pre-training, overcoming a fundamental limitation for supervised machine learning in X-ray science. We demonstrate experimentally that DONUT accurately extracts all features within the data over 200 times more efficiently than conventional fitting methods.

Zhou, Tao [Argonne National Laboratory (ANL), Argo↗

Global Precipitation Experiment—A New World Climate Research Programme Lighthouse Activity

The future state of the global water cycle and the prediction of freshwater availability for humans around the world remain among the challenges of climate research and are relevant to several United Nations Sustainable Development Goals. The Global Precipitation Experiment (GPEX) takes on the challenge of improving the prediction of precipitation quantity, phase, timing, and intensity, characteristics that are products of a complex integrated system. It will achieve this by leveraging existing World Climate Research Programme (WCRP) activities and community capabilities in satellite, surface-based, and airborne observations, modeling, and experimental research and by conducting new and focused activities. It was launched in October 2023 as a WCRP Lighthouse Activity. Here, we present an overview of the GPEX Science Plan that articulates the primary science questions related to precipitation measurements, process understanding, model performance and improvements, and plans for capacity development. The central phase of GPEX is the WCRP Years of Precipitation for 2–3 years with coordinated global field campaigns focusing on different storm types (atmospheric rivers, mesoscale convective systems, monsoons, and tropical cyclones, among others) over different regions and seasons. Activities are planned over the three phases (before, during, and after the Years of Precipitation) spanning a decade. These include gridded data evaluation and development, advanced modeling, enhanced understanding of processes critical to precipitation, multiscale prediction of precipitation events across scales, and capacity development. These activities will be further developed as part of the GPEX Implementation Plan.

Climate change↗

Examining the Impacts of Great Lakes Temperature Perturbations on Simulated Precipitation in the Northeastern United States

Most inland water bodies are not resolved by general circulation models, requiring that lake surface temperatures be estimated. Given the large spatial and temporal variability of the surface temperatures of the North American Great Lakes, such estimations can introduce errors when used as lower boundary conditions for dynamical downscaling. Lake surface temperatures (LSTs) influence moisture and heat fluxes, thus impacting precipitation within the immediate region and potentially in regions downwind of the lakes. For this study, the Advanced Research version of the Weather Research and Forecasting Model (WRF-ARW) was used to simulate precipitation over the six New England states during a 5-yr historical period. The model simulation was repeated with perturbed LSTs, ranging from 10°C below to 10°C above baseline values obtained from reanalysis data, to determine whether the inclusion of erroneous LST values has an impact on simulated precipitation and synoptic-scale features. Results show that simulated precipitation in New England is statistically correlated with LST perturbations, but this region falls on a wet–dry line of a larger bimodal distribution. Wetter conditions occur to the north and drier conditions occur to the south with increasing LSTs, particularly during the warm season. Additionally, the precipitation differences coincide with large-scale anomalous temperature, pressure, and moisture patterns. Care must therefore be taken to ensure reasonably accurate Great Lakes surface temperatures when simulating precipitation, especially in southeastern Canada, Maine, and the mid-Atlantic region.

54 ENVIRONMENTAL SCIENCES↗

Forced Component Estimation Statistical Method Intercomparison Project (ForceSMIP)

Anthropogenic climate change is unfolding rapidly, yet its regional manifestation can be obscured by internal variability. A primary goal of climate science is to identify the externally forced climate response from among the noise of internal variability. Separating the forced response from internal variability can be addressed in climate models by using a large ensemble to average over different possible realizations of internal variability. However, with only one realization of the real world, it is a major challenge to isolate the forced response directly in observations. In the Forced Component Estimation Statistical Method Intercomparison Project (ForceSMIP), contributors used existing and newly developed statistical and machine learning methods to estimate the forced response over 1950–2022 within individual realizations of the climate system. Participants used neural networks, linear inverse models, fingerprinting methods, and low-frequency component analysis, among other approaches. These methods were trained using large ensembles from multiple climate models and then applied to observations. Here, we evaluate method performance within large ensembles and investigate the estimates of the forced response in observations. Our results show that many different types of methods are skillful for estimating the forced response in climate models, though the relative skill of individual methods varies depending on the variable and evaluation metric. Methods with comparable skill in models can give a wide range of estimates of the forced response pattern in observations, illustrating the epistemic uncertainty in forced response estimates. ForceSMIP gives new insights into the forced response in observations, its uncertainty, and methods for its estimation.

Climate attribution↗

The gut microbiome mediates adaptation to scarce food in Coleoptera

Beetles are ubiquitous cave invertebrates worldwide that adapted to scarce subterranean resources when they colonized caves. Here, we investigated the potential role of gut microbiota in the adaptation of beetles to caves from different climatic regions of the Carpathians. The beetles’ microbiota was host-specific, reflecting phylogenetic and nutritional adaptation. The microbial community structure further resolved conspecific beetles by caves suggesting microbiota-host coevolution and influences by local environmental factors. The detritivore species hosted a variety of bacteria known to decompose and ferment organic matter, suggesting turnover and host cooperative digestion of the sedimentary microbiota and allochthonous-derived nutrients. The cave Carabidae, with strong mandibula, adapted to predation and scavenging of animal and plant remains, had distinct microbiota dominated by symbiotic lineages Spiroplasma or Wolbachia. All beetles had relatively high levels of fermentative Carnobacterium and Vagococcus involved in lipid accumulation and a reduction of metabolic activity, and both features characterize adaptation to caves.

59 BASIC BIOLOGICAL SCIENCES↗

GEOPHIRES files for DDU techno-economic simulations

During 2017-2019, the U.S. Department of Energy funded six geothermal deep direct-use (DDU) projects to investigate feasibility of DDU for heating, cooling and thermal storage in the United States. In a follow-on study conducted at the National Renewable Energy Laboratory (NREL), findings of these six projects were reviewed and analyzed, and additional simulations were conducted using the simulator GEOPHIRES to explore technical performance and cost-competitiveness of DDU. The results of the NREL study were published in the paper "Evaluating the Feasibility of Geothermal Deep Direct-Use in the United States." The GEOPHIRES files developed in that study are included in this submission. The reference for the paper under review is below: Beckers KF, Kolker A, Pauling H, McTigue JD, and Kesseli D (2021) ?Evaluating the Feasibility of Geothermal Deep Direct-Use in the United States?, Submitted to Energy Conversion and Management, Under Review.

15 GEOTHERMAL ENERGY↗

Monthly averages of ED2 model simulations initialized with airborne lidar structure, Jan 1981-Dec 2018, Brazilian Amazon

Deforestation and forest degradation (selective logging, fires, fragmentation) have impacted nearly 40% of the original extent of the Brazilian Amazon, and have markedly impacted forest structure across the region. To date, few studies analysed how shifts in forest structure from degradation influence the forest sensitivity to climate extremes, because of the complex interactions between forest structure and micro-environmental conditions. To address this knowledge gap, we carried out a series of simulations across the Brazilian Amazon using the Ecosystem Demography Model (ED2), using observed forest structure derived from 541 airborne lidar transects (375 ha each) and two scenarios representing forest recovery and expansion of degradation to investigate how shifts in forest structure impact ecosystem function under near-average and extreme climate conditions, as part of the manuscript Longo et al 2025 "Degradation and Deforestation Increase the Sensitivity of the Amazon Forest to Climate Extremes". This dataset provides the output results from the ED2 model simulations for the three simulations at monthly time scales, in NetCDF format. For all simulations, we used bias-corrected hourly reanalyses (WFDE5) for most meteorological drivers, except for precipitation, which was obtained from CHIRPS. The meteorological drivers used in the study span 38 years (Jan 1981–Dec 2018). The output results correspond to the last 38 years of simulation (one full cycle of meteorological drivers), in which ED2 simulations used static stand structure (i.e., the forest structure was held constant). The following files are provided:ED2_emean_Global_R004_BrAmaz_s1c0t0l0f0.nc. This corresponds to the Control simulation. The forest structure was obtained from the airborne lidar.ED2_emean_Global_R005_BrAmaz_s1c0t1l1f0.nc. This corresponds to the Degraded simulation. The forest structure was obtained from a spin-up simulation initialized with airborne lidar and a scenario that expanded deforestation and selective logging across the Amazon.ED2_emean_Global_R006_BrAmaz_s1c0t1l0f0.nc. This corresponds to the Recovery simulation. The forest structure was obtained from a spin-up simulation initialized with airborne lidar and a scenario that completely halted deforestation and degradation, allowing degraded forests to recover for 38 years.We also provide file ED2_zones_R004_BrAmaz_s1c0t0l0f0.nc, which classifies each grid cell into zones used in the reference manuscript: 1: Southeast. 2: South. 3: West. 4: Central. 5: Northeast. 6: North. 7: Northwest". Index 0 corresponds to grid cells excluded from sub-region analyses because they were dominated by flooded forests, deforestation, and naturally non-forest vegetation.

54 ENVIRONMENTAL SCIENCES↗

Site and endmember spectra of terrestrial vegetation and soils for the Colorado Headwaters Ecological Spectroscopy Study, June-July 2025

This dataset provides site and endmember spectra collected during the 2025 Colorado Headwaters Ecological Spectroscopy Study (CHESS) campaign. The site spectra were collected to help validate airborne hyperspectral data acquired by the National Ecological Observatory Network's aerial observation platform (NEON AOP). Endmember spectra were collected to augment existing spectral libraries with additional samples of bare surfaces and non-photosynthetic vegetation. All measurements were acquired with an Analytical Spectral Devices (ASD) FieldSpec4 Hi-Res NG (Next Generation) spectroradiometer, which records radiance at 1nm (nanometer) intervals from the ultraviolet to the short-wave infrared (350-2500 nm). The dataset includes spectra measured at meadow sites where the CHESS team also collected vegetation samples for trait analyses. The site spectra were collected with the ASD FieldSpec4 palm grip attachment using an 8° field-of-view foreoptic. Site spectra are integrated measurements of the entire surface within the foreoptic’s field of view. For site-level spectra, the sun is the illumination source. A Spectralon panel mounted on a tripod was used for instrument optimization and white reference measurements for all site spectra. Site spectra were acquired within two hours of solar noon and within 48 hours of a NEON AOP overflight. Site spectra are labeled by date, sampling area, and site number according to the naming conventions of the CHESS campaign’s data management plan. The dataset also contains endmember spectra in the following categories: photosynthetic vegetation (PV), non-photosynthetic vegetation (NPV), bare (soil/rock), and flowers. Endmember measurements were acquired using either the contact probe or the leaf clip attachments of the ASD FieldSpec4. In these configurations, the bulb inside the spectrometer provides the light source for the measurements. The spectrometer was optimized and white reference measurements were recorded using the circular white pucks attached to the contact probe and leaf clip. Because they do not rely on solar illumination, contact probe and leaf clip measurements were collected during a broader time frame than the palm grip site spectra. Some endmembers were measured at CHESS meadow sites, while others were collected within the larger sampling area or in nearby locations (e.g. Gothic Townsite) with similar characteristics. Radiance, reflectance, and metadata files are split into three subfolders according to measurement type: proximal/palm grip (prx), contact probe (cp), and leaf clip (lc). Radiance spectra are provided in ASD file format (.asd file extension). All ASD files can be opened using the provided scripts. Metadata is provided in two formats: CSV file format (no geolocation) and GEOJSON file format (includes geolocation for each spectra). The dataset includes a set of pre-processed reflectance spectra as CSV files (yyyymmdd_rfl.csv). The python scripts and jupyter notebook used to calculate reflectance spectra from the ASD radiance data is included here and was previously published at: https://doi.org/10.3334/ORNLDAAC/2446. There is also a folder of JPEG photographs corresponding to selected spectra. We include a protocol document with detailed steps for ASD FieldSpec4 assembly and operations. This data additionally contains a file level metadata (flmd.csv) and data dictionary (dd.csv) file. Geospatial information: Geospatial data for mapping measurement site locations are in the files CHESS_polygons_lai_UTM.geojson, CHESS_polygons_shrub_UTM.geojson, and CHESS_polygons_meadow_UTM.geojson in the companion geospatial package for the 2025 CHESS campaign, ‘CHESS 2025: Location data for field observations and sampling’ (Henderson et al., 2026). CHESS Project Description: The Colorado Headwaters Ecological Spectroscopy Study (CHESS) comprised a multi-week airborne remote sensing and field observation campaign in the Upper Gunnison Basin, Colorado, conducted in June and July of 2025. Airborne remote sensing was conducted by the National Ecological Observatory Network Airborne Observation Platform (NEON AOP), concurrent with a field campaign run by the Rocky Mountain Biological Laboratory (RMBL), the Lawrence Berkeley National Laboratory (LBNL) and SLAC National Accelerator Laboratory Watershed Function Science Focus Area (SFA), and NASA-JPL (Jet Propulsion Laboratory) Earth Surface Mineral Dust Source Investigation (EMIT) program. Between June 10 and July 18, 2025, the NEON AOP flight team collected high-resolution aerial imaging spectroscopy and Light Detection and Ranging (LiDAR) data over three domains: the Upper East River (CRBU), Almont Triangle (ALMO), and the Upper Taylor Basin (UPTA). In coordination with the flights, a field campaign acquired ground-truth observations, including observations of vegetation composition, foliar traits, forest demography, and subsurface properties in 18 core sampling areas within the domains. Additional surface water observations were taken at over 380 point locations. All CHESS campaign datasets can be found within the CHESS ESS-DIVE data portal: https://data.ess-dive.lbl.gov/portals/chess. Funding Acknowledgment: This research was carried out at the Jet Propulsion Laboratory, California Institute of Technology, under a contract with the National Aeronautics and Space Administration (80NM0018D0004) and was funded by EMIT Extended Mission Phase E Science.

2018 NEON and 2025 CHESS Campaigns↗

Physics Briefing Book: Input for the 2026 update of the European Strategy for Particle Physics

The European Strategy for Particle Physics (ESPP) reflects the vision and presents concrete plans of the European particle physics community for advancing human knowledge in fundamental physics. The ESPP is updated every five-to-six years through a community-driven process. It commences with the submission of specific proposals and other input from the community at large, outlining projects envisioned for the near-, mid-, and long-term future. All submitted contributions are evaluated by the Physics Preparatory Group (PPG), and a preliminary analysis is presented at a Symposium meant to foster a broad community discussion on the scientific value and feasibility of the various ideas proposed. The outcomes of the analysis and the deliberations at the Symposium are synthesized in the current Briefing Book, which provides an important input in the deliberations of the Strategy recommendations by the European Strategy Group (ESG).

de Blas, Jorge [Univ. of Granada (Spain); et al.]↗

AmeriFlux US-ABb Archbold ungrazed seminative pasture

This is the AmeriFlux version of the carbon flux data for the site US-ABb Archbold ungrazed seminative pasture. Site Description - Semi-native pasture used for grazing since the early 1900's. Prescribed fire every 2-3 years. There is no record of any soil amendments of fertilizer applied. Soil is sandy loamy. Malabar serie. Grazing was removed in 2013 for the period of the study 2013-2015.

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux US-ABa Archbold grazed seminative pasture

This is the AmeriFlux version of the carbon flux data for the site US-ABa Archbold grazed seminative pasture. Site Description - Grazing since the early 1900s. Prescribed fire every 2-3 years. There is no record of any soil amendments or fertilizer applied. Soils are sandy loamy. Malabar soil.

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux US-ABc Archbold grazed improved pasture

This is the AmeriFlux version of the carbon flux data for the site US-ABc Archbold grazed improved pasture. Site Description - This site is an improved pasture, regularly fertilized (nitrogen, ~26 kg/ha every 2 years) and limed (~229 kg/ha every 5 years, and historically received phosphorus fertilizer until 1986; . The soil type is a fine sandy Spodosol

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux US-ABd Archbold ungrazed improved pasture

This is the AmeriFlux version of the carbon flux data for the site US-ABd Archbold ungrazed improved pasture. Site Description - This site is an improved pasture, regularly fertilized (nitrogen, ~26 kg/ha every 2 years) and limed (~229 kg/ha every 5 years; and historically received phosphorus fertilizer until 1986; . The soil type is a fine sandy Spodosol . Grazing was removed in 2013-2015 for the duration of the study

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux US-ABe Archbold Ungrazed Wetland

This is the AmeriFlux version of the carbon flux data for the site US-ABe Archbold Ungrazed Wetland. Site Description - The studied wetland is embedded within an intensively managed pasture, a common landscape in Florida, with the C4 bahiagrass (Paspalum notatum Flueggé) as forage grass. The wetland is an isolated, seasonal freshwater wetland. Soil was Samsula muck of Samsula Series (hyperthermic Terric Haplosaprists)

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux FLUXNET-1F US-ABe Archbold Ungrazed Wetland

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ABe Archbold Ungrazed Wetland. This is the FLUXNET version of the carbon flux data for the site US-ABe Archbold Ungrazed Wetland produced by applying the standard ONEFlux (1F) software. Site Description - The studied wetland is embedded within an intensively managed pasture, a common landscape in Florida, with the C4 bahiagrass (Paspalum notatum Flueggé) as forage grass. The wetland is an isolated, seasonal freshwater wetland. Soil was Samsula muck of Samsula Series (hyperthermic Terric Haplosaprists)

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux FLUXNET-1F US-ABa Archbold grazed seminative pasture

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ABa Archbold grazed seminative pasture. This is the FLUXNET version of the carbon flux data for the site US-ABa Archbold grazed seminative pasture produced by applying the standard ONEFlux (1F) software. Site Description - Grazing since the early 1900s. Prescribed fire every 2-3 years. There is no record of any soil amendments or fertilizer applied. Soils are sandy loamy. Malabar soil.

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux FLUXNET-1F US-ABb Archbold ungrazed seminative pasture

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ABb Archbold ungrazed seminative pasture. This is the FLUXNET version of the carbon flux data for the site US-ABb Archbold ungrazed seminative pasture produced by applying the standard ONEFlux (1F) software. Site Description - Semi-native pasture used for grazing since the early 1900's. Prescribed fire every 2-3 years. There is no record of any soil amendments of fertilizer applied. Soil is sandy loamy. Malabar serie. Grazing was removed in 2013 for the period of the study 2013-2015.

Bernacchi, Carl [Global Change and Photosynthesis ↗

AmeriFlux FLUXNET-1F US-ABc Archbold grazed improved pasture

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ABc Archbold grazed improved pasture. This is the FLUXNET version of the carbon flux data for the site US-ABc Archbold grazed improved pasture produced by applying the standard ONEFlux (1F) software. Site Description - This site is an improved pasture, regularly fertilized (nitrogen, ~26 kg/ha every 2 years) and limed (~229 kg/ha every 5 years, and historically received phosphorus fertilizer until 1986; . The soil type is a fine sandy Spodosol

Bernacchi, Carl [Global Change and Photosynthesis ↗