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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 451 records · Page 25

Modeling Cell Migration with Convolutional Neural Network and Deep Reinforcement Learning

Cell migration modeling is a longstanding biological challenge, which is regulated by a highly complex set of regulatory mechanisms at multiple scales in a developmental system. This study presents a generic framework for regulatory mechanisms discovery during cell migration. This framework uses convolutional neural networks and reinforcement learning to better study navigation rules and mechanisms during cell migration. This framework adopts a flexible model-free approach that directly takes raw images as the sensory input. It can better handle simulation scenarios that involve cell division during embryogenesis. Computational experiments also prove that this model achieves better performance than a previous model with a fully connected neural network.

Wang, Zi↗

Sparse Data Management in HDF5

The importance of sparse data management is growing with data produced by large-scale experimental and observational facilities that contain small amounts of non-zero values. In this document, we explore different design options to support sparse data in HDF5, one of the most popular highperformance I/O libraries and file formats used for scientific data. We discuss several use cases and requirements. Our main hard design constraint is that any changes to the HDF5 dataset API would be a burden on users and not acceptable. The remaining options are discussed below. We provide rationale for what we believe is the strongest candidate and describe how its potential benefits can be simulated with the existing HDF5 library. We have conducted a set of computational experiments the results of which are reported here. They show that our candidate meets all relevant requirements and gives us a certain degree of confidence for an HDF5 library-native implementation.

Mainzer, John↗

Real-Time Radiological Source Term Estimation for Multiple Sources in Cluttered Environments

A particle filter algorithm is presented to estimate the position, strength, and cardinality of an unknown number of radioactive point sources in an obstacle-rich environment using count measurements. The algorithm addresses gaps in the prior literature by incorporating two novel elements. The first is a precomputation step in which local terrain and obstacle data is processed to compute attenuation kernels throughout the search area. This enables rapid estimation performance in obstacle-rich environments as measurements are gathered. The second novel feature is a dynamic particle allocation technique in which the number of particles is adjusted in real time to meet convergence goals. This feature allows the algorithm to scale more efficiently to scenarios with a larger number of sources. A series of computational experiments using simulated data demonstrates the algorithm’s performance in a cluttered environment with up to eight sources.

Kemp, Samuel↗

Space Shuttle Debris Impact Tool Assessment Using the Modern Design of Experiments

Complex computer codes are used to estimate thermal and structural reentry loads on the Shuttle Orbiter induced by ice and foam debris impact during ascent. Such debris can create cavities in the Shuttle Thermal Protection System. The sizes and shapes of these cavities are approximated to accommodate a code limitation that requires simple "shoebox" geometries to describe the cavities -- rectangular areas and planar walls that are at constant angles with respect to vertical. These approximations induce uncertainty in the code results. The Modern Design of Experiments (MDOE) has recently been applied to develop a series of resource-minimal computational experiments designed to generate low-order polynomial graduating functions to approximate the more complex underlying codes. These polynomial functions were then used to propagate cavity geometry errors to estimate the uncertainty they induce in the reentry load calculations performed by the underlying code. This paper describes a methodological study focused on evaluating the application of MDOE to future operational codes in a rapid and low-cost way to assess the effects of cavity geometry uncertainty.

DeLoach, Richard↗

Experience with a Genetic Algorithm Implemented on a Multiprocessor Computer

Numerical experiments were conducted to find out the extent to which a Genetic Algorithm (GA) may benefit from a multiprocessor implementation, considering, on one hand, that analyses of individual designs in a population are independent of each other so that they may be executed concurrently on separate processors, and, on the other hand, that there are some operations in a GA that cannot be so distributed. The algorithm experimented with was based on a gaussian distribution rather than bit exchange in the GA reproductive mechanism, and the test case was a hub frame structure of up to 1080 design variables. The experimentation engaging up to 128 processors confirmed expectations of radical elapsed time reductions comparing to a conventional single processor implementation. It also demonstrated that the time spent in the non-distributable parts of the algorithm and the attendant cross-processor communication may have a very detrimental effect on the efficient utilization of the multiprocessor machine and on the number of processors that can be used effectively in a concurrent manner. Three techniques were devised and tested to mitigate that effect, resulting in efficiency increasing to exceed 99 percent.

Plassman, Gerald E.↗

Experience with a Genetic Algorithm Implemented on a Multiprocessor Computer

Numerical experiments were conducted to find out the extent to which a Genetic Algorithm (GA) may benefit from a multiprocessor implementation, considering, on one hand, that analyses of individual designs in a population are independent of each other so that they may be executed concurrently on separate processors, and, on the other hand, that there are some operations in a GA that cannot be so distributed. The algorithm experimented with was based on a gaussian distribution rather than bit exchange in the GA reproductive mechanism, and the test case was a hub frame structure of up to 1080 design variables. The experimentation engaging up to 128 processors confirmed expectations of radical elapsed time reductions comparing to a conventional single processor implementation. It also demonstrated that the time spent in the non-distributable parts of the algorithm and the attendant cross-processor communication may have a very detrimental effect on the efficient utilization of the multiprocessor machine and on the number of processors that can be used effectively in a concurrent manner. Three techniques were devised and tested to mitigate that effect, resulting in efficiency increasing to exceed 99 percent.

Plassman, Gerald E.↗

On-Sensor Data Filtering using Neuromorphic Computing for High Energy Physics Experiments

This work describes the investigation of neuromorphic computing-based spiking neural network (SNN) models used to filter data from sensor electronics in high energy physics experiments conducted at the High Luminosity Large Hadron Collider. We present our approach for developing a compact neuromorphic model that filters out the sensor data based on the particle's transverse momentum with the goal of reducing the amount of data being sent to the downstream electronics. The incoming charge waveforms are converted to streams of binary-valued events, which are then processed by the SNN. We present our insights on the various system design choices - from data encoding to optimal hyperparameters of the training algorithm - for an accurate and compact SNN optimized for hardware deployment. Our results show that an SNN trained with an evolutionary algorithm and an optimized set of hyperparameters obtains a signal efficiency of about 91% with nearly half as many parameters as a deep neural network.

R. Kulkarni, Shruti↗

Laser-driven flyer plate impact: Computational studies guided by experiments

We present a computational approach using a multimaterial, arbitrary Lagrangian–Eulerian code termed ALE3D to model the nanosecond/micrometer dynamics of the launch of 0.5–4.5 km/s laser-driven metal flyer plates and the impact with stationary targets of Pyrex and fused silica glasses, and Lexan and Plexiglas polymers, producing pressures in the target in the range of 5–20 GPa. The simulations are compared to experimental results where the flyer velocity profile and the velocity profile imparted to the target material were measured with high-speed velocimetry. The experimental flyer launch by a high-intensity pulsed laser is modeled by depositing heat into a thin vaporizable layer under the flyer plate. This model produces a flyer plate that has not been exposed to the laser pulse, allowing us to compare the properties of the real flyer to a simulated ideal flyer. The simulations of target impact are generally in good agreement with the experiment except at the highest impact velocities where the shock release process in the experiment is slower than that in the simulation. The cause of this disagreement is attributed to an inadequate description of the shock viscosity during the nanosecond unloading process.

Stekovic, Svjetlana (ORCID:0000000163878070)↗

A computer program to determine the possible daily release window for sky target experiments

A computer program is presented which is designed to determine the daily release window for sky target experiments. Factors considered in the program include: (1) target illumination by the sun at release time and during the tracking period; (2) look angle elevation above local horizon from each tracking station to the target; (3) solar depression angle from the local horizon of each tracking station during the experimental period after target release; (4) lunar depression angle from the local horizon of each tracking station during the experimental period after target release; and (5) total sky background brightness as seen from each tracking station while viewing the target. Program output is produced in both graphic and data form. Output data can be plotted for a single calendar month or year. The numerical values used to generate the plots are furnished to permit a more detailed review of the computed daily release windows.

Michaud, N. H.↗

Implementation of Model-Based Design of Experiments: Application of Computational Modeling to Support HRP Studies

This study illustrates the potential gains obtained by leveraging computational modeling to improve experimental efficiency in NASA research and counter measures studies through implementation of Model-Based Design of Experiments (MBDOE). MBDOE is a method to utilize analogous computational models to improve understanding of complex, multifactor, experimental responses and to determine experimental conditions and optimize information in the fewest number of experimental tests.

physiological response↗

Neutron Leakage Spectra Sensitivities for ICSBEP Benchmarks

Neutron leakage spectra have been measured, simulated, and investigated by many groups. These spectra have many uses, including determining shielding requirements and calculating dose for radiation protection purposes, validating nuclear data, and determining material composition. It has even been proposed to use measurements of neutron leakage spectra to determine the soil composition of Mars. As part of the Los Alamos National Laboratory (LANL) Experiments Underpinned by Computational Learning for Improvements in nuclear Data (EUCLID) Laboratory Directed Research Development (LDRD) project, the authors are working on developing methods to calculate sensitivities to neutron leakage spectra. This may allow nuclear data evaluators to better use neutron leakage spectra data to constrain or adjust nuclear data. This may also be particularly useful as many neutron leakage spectra measurements do not require fissile material and can be performed with well characterized neutron sources. Neutron leakage spectra measurements are usually performed by placing a detector at the outside of a nuclear system. This may be a reactor, a neutron generator, or a neutron source. Certain detection systems can use pulse height data to infer neutron energies, other detector systems rely on other ways of determining neutron energy (for example, a Bonner sphere with multiple moderator thicknesses can be used to measure neutron spectrum). These measurements typically rely on some unfolding of the measured results. For pulsed systems like the "Livermore Pulsed Spheres," time-of-flight information can also help to constrain the neutron energy spectra data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Magnetic reconnection in the era of exascale computing and multiscale experiments

Astrophysical plasmas have the remarkable ability to preserve magnetic topology, which inevitably gives rise to the accumulation of magnetic energy within stressed regions including current sheets. This stored energy is often released explosively through the process of magnetic reconnection, which produces a reconfiguration of the magnetic field, along with high-speed flows, thermal heating and nonthermal particle acceleration. Either collisional or kinetic dissipation mechanisms are required to overcome the topological constraints, both of which have been predicted by theory and validated with in situ spacecraft observations or laboratory experiments. However, major challenges remain in understanding magnetic reconnection in large systems, such as the solar corona, where the collisionality is weak and the kinetic scales are vanishingly small in comparison with macroscopic scales. The plasmoid instability or formation of multiple plasmoids in long, reconnecting current sheets is one possible multiscale solution for bridging this vast range of scales, and new laboratory experiments are poised to study these regimes. In conjunction with these efforts, we anticipate that the coming era of exascale computing, together with the next generation of observational capabilities, will enable new progress on a range of challenging problems, including the energy build-up and onset of reconnection, partially ionized regimes, the influence of magnetic turbulence and particle acceleration.

79 ASTRONOMY AND ASTROPHYSICS↗

Optimal size of the block in block GMRES on GPUs: computational model and experiments

The block version of GMRES (BGMRES) is most advantageous over the single right hand side (RHS) counterpart when the cost of communication is high while the cost of floating point operations is not. This is the particular case on modern graphics processing units (GPUs), while it is generally not the case on traditional central processing units (CPUs). Here, in this paper, experiments on both GPUs and CPUs are shown that compare the performance of BGMRES against GMRES as the number of RHS increases, with a particular focus on GPU performance. The experiments indicate that there are many cases in which BGMRES is slower than GMRES on CPUs, but faster on GPUs. Furthermore, when varying the number of RHS on the GPU, there is an optimal number of RHS where BGMRES is clearly most advantageous over GMRES. A computational model for the GPU is developed using hardware specific parameters, providing insight towards how the qualitative behavior of BGMRES changes as the number of RHS increase, and this model also helps explain the phenomena observed in the experiments.

97 MATHEMATICS AND COMPUTING↗

Failure of molecular dynamics to provide appropriate structures for quantum mechanical description of the aqueous chloride ion charge-transfer-to-solvent ultraviolet spectrum

The lowest band in the charge-transfer-to-solvent ultraviolet absorption spectrum of aqueous chloride ion is studied by experiment and computation. Interestingly, the experiments indicate that at concentrations up to at least 0.25 M, where calculations indicate ion pairing to be significant, there is no notable effect of ionic strength on the spectrum. The experimental spectra are fitted to aid comparison with computations. Classical molecular dynamic simulations are carried out on dilute aqueous Cl - , Na + , and NaCl, producing radial distribution functions in reasonable agreement with experiment and, for NaCl, clear evidence of ion pairing. Clusters are extracted from the simulations for quantum mechanical excited state calculations. Accurate ab initio coupled-cluster benchmark calculations on a small number of representative clusters are carried out and used to identify and validate an efficient protocol based on time-dependent density functional theory. The latter is used to carry out quantum mechanical calculations on thousands of clusters. The resulting computed spectrum is in excellent agreement with experiment for the peak position, with little influence from ion pairing, but is in qualitative disagreement on the width, being only about half as wide. It is concluded that simulation by classical molecular dynamics fails to provide an adequate variety of structures to explain the experimental CTTS spectrum of aqueous Cl - .

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Depressurization-Induced Fines Migration in Sediments Containing Methane Hydrate: X-Ray Computed Tomography Imaging Experiments

Depressurization of hydrate-bearing sediments (HBS) can cause the movement of fine particles, and in turn, such fines migration affects fluid flow and mechanical behavior of sediments, ultimately affecting long-term hydrocarbon production and wellbore stability. In this work, we investigate how and to what extent depressurization of HBS causes fines migration using X-ray computed tomography (CT) imaging. Methane hydrate was synthesized in sediments with 10% fines content (FC), composed of sands with silt and/or clay, and the hydrate-bearing samples were stepwisely depressurized while acquiring CT images. The CT images were analyzed to quantify the spatial changes in FC in the host sediment and thus to capture the fines migration during depressurization. It was found that the FC changes began occurring from the hydrate dissociation regions. This confirms that the multiphase flow caused by depressurization accompanies fines migration. Depressurization of HBS with a hydrate saturation of ~20–40% caused FC reduction from ~10% to ~6–9%, and the extent of fines migration differed with the particle sizes of the host sands and the types of fines. It was found that fines migration was more pronounced with coarse sands and with silty fines. Such observed level of FC reduction is estimated to increase sediment permeability by several factors based on the Kozeny-type permeability model. In conclusion, our results support the notion that the extent of fines migration and its effect on fluid flow behavior need to be assessed in consideration of physical properties of host sediment and fine particles to identify optimum depressurization strategies.

42 ENGINEERING↗

The Ruggedized STD Bus Microcomputer - A low cost computer suitable for Space Shuttle experiments

Previous space flight computers have been costly in terms of both hardware and software. The Ruggedized STD Bus Microcomputer is based on the commercial Mostek/Pro-Log STD Bus. Ruggedized PC cards can be based on commercial cards from more than 60 manufacturers, reducing hardware cost and design time. Software costs are minimized by using standard 8-bit microprocessors and by debugging code using commercial versions of the ruggedized flight boards while the flight hardware is being fabricated.

Budney, T. J.↗