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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 451 records · Page 25
All sourcesNASA NTRSDOE OSTI
DOE OSTI2015

Oligomycin frames a common drug-binding site in the ATP synthase

We report the high-resolution (1.9 {angstrom}) crystal structure of oligomycin bound to the subunit c10 ring of the yeast mitochondrial ATP synthase. Oligomycin binds to the surface of the c10 ring making contact with two neighboring molecules at a position that explains the inhibitory effect on ATP synthesis. The carboxyl side chain of Glu59, which is essential for proton translocation, forms an H-bond with oligomycin via a bridging water molecule but is otherwise shielded from the aqueous environment. The remaining contacts between oligomycin and subunit c are primarily hydrophobic. The amino acid residues that form the oligomycin-binding site are 100% conserved between human and yeast but are widely different from those in bacterial homologs, thus explaining the differential sensitivity to oligomycin. Prior genetics studies suggest that the oligomycin-binding site overlaps with the binding site of other antibiotics, including those effective against Mycobacterium tuberculosis, and thereby frames a common 'drug-binding site.' We anticipate that this drug-binding site will serve as an effective target for new antibiotics developed by rational design.

Symersky, Jindrich↗
DOE OSTI2025

Personalized Tucker Decomposition: Modeling Commonality and Peculiarity on Tensor Data

In this paper, we propose a personalized Tucker decomposition (perTucker) to address the limitations of traditional tensor decomposition methods in capturing heterogeneity across different datasets. perTucker decomposes tensor data into shared global components and personalized local components. We introduce an order orthogonality assumption and develop a proximal gradient regularized block coordinate descent algorithm guaranteed to converge to a stationary point. The unique and common representations learned by perTucker reveal intrinsic statistical patterns in data and provide valuable information for a wide range of downstream analytics, including anomaly detection, source classification, and clustering. We demonstrate perTucker’s effectiveness through a simulation study and two case studies on solar flare detection and tonnage signal classification.

14 SOLAR ENERGY↗
DOE OSTI2015

Stock Differences in Growth, Smolting, and Early Male Maturation in Hatchery Spring Chinook Salmon: a Common-Garden Experiment

Abstract Hatchery spring Chinook Salmon Oncorhynchus tshawytscha from Parkdale Hatchery on the Hood River, Oregon, and Carson National Fish Hatchery (CNFH) on the Wind River, Washington, were reared under a common-garden experimental regime at CNFH over three consecutive brood years (2008–2010) to assess the effects of stock on smoltification and early male maturation. Rearing groups were monitored for size, percent solid (a surrogate for whole-body lipid), gill Na+,K+-ATPase activity, and rate of precocious maturation in males (i.e., age-2 minijack rate). Despite rearing of the stocks under identical conditions, the out-of-basin Hood River stock was significantly smaller throughout the study and at release as smolts, had lower whole-body lipid at release, and had lower gill Na+,K+-ATPase activity at release than the Carson stock; furthermore, the Hood River stock exhibited much higher mean minijack rates than the Carson stock (45% versus 23% of males). Using logistic regression, we demonstrated that the threshold size for initiation of early male maturation was significantly lower for the Hood River stock than for the Carson stock, suggesting a genetic basis for this life history difference. The present study highlights the importance of understanding how specific genotypes may respond differently to the unique environmental conditions in a given hatchery environment. These differences may in turn influence physiological and life history pathways that affect smolt-to-adult return rates and the demography of returning adults.

Spangenberg, Dina K.↗
DOE OSTI2014

Optical BVRI photometry of common proper motion F/G/K+M wide separation binaries

We present optical (BVRI) photometric measurements of a sample of 76 common proper motion wide separation main-sequence binary pairs. The pairs are composed of a F-, G-, or K-type primary star and an M-type secondary. The sample is selected from the revised NLTT catalog and the LSPM catalog. The photometry is generally precise to 0.03 mag in all bands. We separate our sample into two groups, dwarf candidates and subdwarf candidates, using the reduced proper motion diagram constructed with our improved photometry. The M subdwarf candidates in general have larger V – R colors than the M dwarf candidates at a given V – I color. This is consistent with an average metallicity difference between the two groups, as predicted by the PHOENIX/BT-Settl models. The improved photometry will be used as input into a technique to determine the metallicities of the M-type stars.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

STUDYING ATMOSPHERE-DOMINATED HOT JUPITER KEPLER PHASE CURVES: EVIDENCE THAT INHOMOGENEOUS ATMOSPHERIC REFLECTION IS COMMON

We identify three Kepler transiting planets, Kepler-7b, Kepler-12b, and Kepler-41b, whose orbital phase-folded light curves are dominated by planetary atmospheric processes including thermal emission and reflected light, while the impact of non-atmospheric (i.e., gravitational) processes, including beaming (Doppler boosting) and tidal ellipsoidal distortion, is negligible. Therefore, those systems allow a direct view of their atmospheres without being hampered by the approximations used in the inclusion of both atmospheric and non-atmospheric processes when modeling the phase-curve shape. We present here the analysis of Kepler-12b and Kepler-41b atmosphere based on their Kepler phase curve, while the analysis of Kepler-7b was already presented elsewhere. The model we used efficiently computes reflection and thermal emission contributions to the phase curve, including inhomogeneous atmospheric reflection due to longitudinally varying cloud coverage. We confirm Kepler-12b and Kepler-41b show a westward phase shift between the brightest region on the planetary surface and the substellar point, similar to Kepler-7b. We find that reflective clouds located on the west side of the substellar point can explain the phase shift. The existence of inhomogeneous atmospheric reflection in all three of our targets, selected due to their atmosphere-dominated Kepler phase curve, suggests this phenomenon is common. Therefore, it is also likely to be present in planetary phase curves that do not allow a direct view of the planetary atmosphere as they contain additional orbital processes. We discuss the implications of a bright-spot shift on the analysis of phase curves where both atmospheric and gravitational processes appear, including the mass discrepancy seen in some cases between the companion’s mass derived from the beaming and ellipsoidal photometric amplitudes. Finally, we discuss the potential detection of non-transiting but otherwise similar planets, whose mass is too small to show a gravitational photometric signal, but their atmosphere is reflective enough to show detectable phase modulations.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

Spectral energy distributions of QSOs at z > 5: Common active galactic nucleus-heated dust and occasionally strong star-formation

We present spectral energy distributions (SEDs) of 69 QSOs at z > 5, covering a rest frame wavelength range of 0.1 μm to ∼80 μm, and centered on new Spitzer and Herschel observations. The detection rate of the QSOs with Spitzer is very high (97% at λ{sub rest} ≲ 4 μm), but drops toward the Herschel bands with 30% detected in PACS (rest frame mid-infrared) and 15% additionally in the SPIRE (rest frame far-infrared; FIR). We perform multi-component SED fits for Herschel-detected objects and confirm that to match the observed SEDs, a clumpy torus model needs to be complemented by a hot (∼1300 K) component and, in cases with prominent FIR emission, also by a cold (∼50 K) component. In the FIR-detected cases the luminosity of the cold component is of the order of 10{sup 13} L {sub ☉} which is likely heated by star formation. From the SED fits we also determine that the active galactic nucleus (AGN) dust-to-accretion disk luminosity ratio declines with UV/optical luminosity. Emission from hot (∼1300 K) dust is common in our sample, showing that nuclear dust is ubiquitous in luminous QSOs out to redshift 6. However, about 15% of the objects appear under-luminous in the near infrared compared to their optical emission and seem to be deficient in (but not devoid of) hot dust. Within our full sample, the QSOs detected with Herschel are found at the high luminosity end in L {sub UV/opt} and L {sub NIR} and show low equivalent widths (EWs) in Hα and in Lyα. In the distribution of Hα EWs, as determined from the Spitzer photometry, the high-redshift QSOs show little difference to low-redshift AGN.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

Common envelope mechanisms: constraints from the X-ray luminosity function of high-mass X-ray binaries

We use the measured X-ray luminosity function (XLF) of high-mass X-ray binaries (HMXBs) in nearby star-forming galaxies to constrain the common envelope (CE) mechanisms, which play a key role in governing the binary evolution. We find that the XLF can be reproduced quite closely under both CE mechanisms usually adopted, i.e., the α{sub CE} formalism and the γ algorithm, with a reasonable range of parameters considered. Provided that the parameter combination is the same, the γ algorithm is likely to produce more HMXBs than the α{sub CE} formalism, by a factor of up to ∼10. In the framework of the α{sub CE} formalism, a high value of α{sub CE} is required to fit the observed XLF, though it does not significantly affect the global number of the HMXB populations. We present the detailed components of the HMXB populations under the γ algorithm and compare them with those in Zuo et al. and observations. We suggest the distinct observational properties, as well as period distributions of HMXBs, may provide further clues to discriminate between these two types of CE mechanisms.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

A common stochastic process rules gamma-ray burst prompt emission and X-ray flares

Prompt γ-ray and early X-ray afterglow emissions in gamma-ray bursts (GRBs) are characterized by a bursty behavior and are often interspersed with long quiescent times. There is compelling evidence that X-ray flares are linked to prompt γ-rays. However, the physical mechanism that leads to the complex temporal distribution of γ-ray pulses and X-ray flares is not understood. Here we show that the waiting time distribution (WTD) of pulses and flares exhibits a power-law tail extending over four decades with an index of about two and can be the manifestation of a common time-dependent Poisson process. This result is robust and is obtained on different catalogs. Surprisingly, GRBs with many (⩾8) γ-ray pulses are very unlikely to be accompanied by X-ray flares after the end of the prompt emission (3.1σ Gaussian confidence). These results are consistent with a simple interpretation: a hyperaccreting disk breaks up into one or a few groups of fragments, each of which is independently accreted with the same probability per unit time. Prompt γ-rays and late X-ray flares are nothing but different fragments being accreted at the beginning and at the end, respectively, following the very same stochastic process and likely the same mechanism.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

ASYMMETRIC ACCRETION FLOWS WITHIN A COMMON ENVELOPE

This paper examines flows in the immediate vicinity of stars and compact objects dynamically inspiralling within a common envelope (CE). Flow in the vicinity of the embedded object is gravitationally focused, leading to drag and potentially to gas accretion. This process has been studied numerically and analytically in the context of Hoyle–Lyttleton accretion (HLA). Yet, within a CE, accretion structures may span a large fraction of the envelope radius, and in so doing sweep across a substantial radial gradient of density. We quantify these gradients using detailed stellar evolution models for a range of CE encounters. We provide estimates of typical scales in CE encounters that involve main sequence stars, white dwarfs, neutron stars, and black holes with giant-branch companions of a wide range of masses. We apply these typical scales to hydrodynamic simulations of three-dimensional HLA with an upstream density gradient. This density gradient breaks the symmetry that defines HLA flow, and imposes an angular momentum barrier to accretion. Material that is focused into the vicinity of the embedded object thus may not be able to accrete. As a result, accretion rates drop dramatically, by one to two orders of magnitude, while drag rates are only mildly affected. We provide fitting formulae to the numerically derived rates of drag and accretion as a function of the density gradient. The reduced ratio of accretion to drag suggests that objects that can efficiently gain mass during CE evolution, such as black holes and neutron stars, may grow less than implied by the HLA formalism.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Contamination of argon x-ray spectra by tungsten and other elements commonly found in tokamaks

Here, emission lines which appear in the spectral ranges of ground state transitions from n> = 2 levels in He- and H-like argon ions are discussed. X-ray transitions from elements commonly found in tokamaks (tungsten, molybdenum, iron and sulphur) which radiate in the wavelength range from 3700–4000 mÅ are identified by comparison with atomic structure calculations. Individual lines from tungsten charge states in the vicinity of Zn-like W 44+ are documented, along with B-like Mo 37+ . The behaviour of line ratios as a function of electron temperature is examined, in support of the identifications.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Prototype hardware design and testing of the global common module for the global trigger subsystem of the ATLAS phase-II upgrade

We report the High-Luminosity Large Hadron Collider (HL-LHC) will deliver more than ten times the integrated luminosity of the previous runs combined. Meeting its stricter throughput requirements poses new challenges to the Trigger and Data Acquisition (TDAQ) systems of the LHC experiments. Introduced in the framework of the ATLAS experiment’s HL upgrade, the Global Trigger (GT) is a new subsystem which will perform offline-like algorithms on full-granularity calorimeter data. The implementation of the GT’s functionality is firmware-focused and is composed of three layers: multiplexing (or data aggregating), global event processing, and demultiplexing interface to the central trigger processor. Each layer will be composed of several, similar nodes, hosted on replicas of identical hardware, the Global Common Module (GCM), an ATCA front board which is designed to be adopted throughout the entire GT subsystem. This article proceeds from the TWEPP 2021 conference and presents the GCM hardware design, performed in 2020, and focuses on some key results of its extensive testing performed in 2021.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2015

ON THE ACCRETION-FED GROWTH OF NEUTRON STARS DURING COMMON ENVELOPE

This paper models the orbital inspiral of a neutron star (NS) through the envelope of its giant-branch companion during a common envelope (CE) episode. These CE episodes are necessary to produce close pairs of NSs that can inspiral and merge due to gravitational wave losses in less than a Hubble time. Because cooling by neutrinos can be very efficient, NSs have been predicted to accumulate significant mass during CE events, perhaps enough to lead them to collapse to black holes. We revisit this conclusion with the additional consideration of CE structure, particularly density gradients across the embedded NS's accretion radius. This work is informed by our recent numerical simulations that find that the presence of a density gradient strongly limits accretion by imposing a net angular momentum to the flow around the NS. Our calculations suggest that NSs should survive CE encounters. They accrete only modest amounts of envelope material, ≲ 0.1 M {sub ☉}, which is broadly consistent with mass determinations of double NS binaries. With less mass gain, NSs must spiral deeper to eject their CE, leading to a potential increase in mergers. The survival of NSs in CE events has implications for the formation mechanism of observed double NS binaries, as well as for predicted rates of NS binary gravitational wave inspirals and their electromagnetic counterparts.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2018

Historical separation and present-day structure of common dolphinfish (Coryphaena hippurus) populations in the Atlantic Ocean and Mediterranean Sea

Abstract The common dolphinfish (Coryphaena hippurus) is an epipelagic, mid-trophic level, highly migratory species distributed throughout the world’s tropical and subtropical oceans in waters greater than 20°C. Life-history variables, migratory behaviour, and genetic markers have been used to define major stocks in the central Atlantic Ocean and Mediterranean Sea. Here, we used the mitochondrial DNA gene NADH subunit 1 (688 bp) to test for differences between population groups. A total of 103 haplotypes were detected among 203 fish. Gene diversities in samples were large and similar among populations (mean h = 0.932; range 0.894–0.987), but nucleotide diversities varied widely among samples (range π = 0.004–0.034) and appear to reflect population histories. Principal component analysis revealed two large populations groups, and the analysis of molecular variation and pairwise values of ΦST resolved population structure within these groups. Populations in the eastern Atlantic and Mediterranean showed the largest amounts of divergence from one another (ΦCT = 0.331). Adult movement and biophysical barriers to larval dispersal may explain contemporary differences between stocks, but the divergent populations in the Mediterranean Sea are likely due to isolations by cold temperature barriers during Pleistocene glaciations. The geographically large stock groupings require international cooperation in the harvest management and conservation of local dolphinfish populations.

Maggio, Teresa↗
DOE OSTI2020

Bipolar planetary nebulae from outflow collimation by common envelope evolution

ABSTRACT The morphology of bipolar planetary nebulae (PNe) can be attributed to interactions between a fast wind from the central engine and the dense toroidal-shaped ejecta left over from common envelope (CE) evolution. Here we use the 3D hydrodynamic adaptive mesh refinement (AMR) code AstroBEAR to study the possibility that bipolar PN outflows can emerge collimated even from an uncollimated spherical wind in the aftermath of a CE event. The output of a single CE simulation via the smoothed particle hydrodynamics (SPH) code phantom serves as the initial conditions. Four cases of winds, all with high enough momenta to account for observed high momenta pre-PN outflows, are injected spherically from the region of the CE binary remnant into the ejecta. We compare cases with two different momenta and cases with no radiative cooling versus application of optically thin emission via a cooling curve to the outflow. Our simulations show that in all cases highly collimated bipolar outflows result from deflection of the spherical wind via the interaction with the CE ejecta. Significant asymmetries between the top and bottom lobes are seen in all cases. The asymmetry is strongest for the lower momentum case with radiative cooling. While real post-CE winds may be aspherical, our models show that collimation via ‘inertial confinement’ will be strong enough to create jet-like outflows even beginning with maximally uncollimated drivers. Our simulations reveal detailed shock structures in the shock-focused inertial confinement (SFIC) model and develop a lens-shaped inner shock that is a new feature of SFIC-driven bipolar lobes.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

First discovery of an ultra-cool white dwarf benchmark in common proper motion with an M dwarf

Ultra-cool white dwarfs are among the oldest stellar remnants in the Universe. Their efficient gravitational settling and low effective temperatures are responsible for the smooth spectra they exhibit. For that reason, it is not possible to derive their radial velocities or to find the chemistry of the progenitors. The best that can be done is to infer such properties from associated sources, which are coeval. The simplest form of such a system is a common proper motion pair where one star is an evolved degenerate and the other a main-sequence star. Herein, we present the discovery of the first of such a system, the M dwarf LHS 6328 and the ultra-cool white dwarf PSO J1801+625, from the Pan-STARRS 1 3π survey and the Gaia Data Release 2. Follow-up spectra were collected covering a usable wavelength range of 3750–24 500 Å. Their spectra show that the white dwarf has an effective temperature of 3550 K and surface gravity of log $g$ = 7.45 ± 0.13 or log $g$ = 7.49 ± 0.13 for a CO or He core, respectively, when compared against synthetic spectra of ultra-cool white dwarf atmosphere models. The system has slightly subsolar metallicity with -0.25 < [Fe/H] < 0.0, and a spatial velocity of (U, V, W) = (-114.26 ± 0.24, 222.94 ± 0.60, 10.25 ± 0.34) km s -1 , the first radial velocity and metallicity measurements of an ultra-cool white dwarf. This makes it the first and only benchmark of its kind to date.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Simulating highly eccentric common envelope jet supernova impostors

We conduct three-dimensional hydrodynamical simulations of eccentric common envelope jet supernova (CEJSN) impostors, i.e. a neutron star that crosses through the envelope of a red supergiant star on a highly eccentric orbit and launches jets as it accretes mass from the envelope. Because of numerical limitations, we apply a simple prescription where we inject the assumed jets’ power into two opposite conical regions inside the envelope. We find the outflow morphology to be very complicated, clumpy, and non-spherical, having a large-scale symmetry only about the equatorial plane. The outflow morphology can substantially differ between simulations that differ by their jets’ power. We estimate by simple means the light curve to be very bumpy, to have a rise time of one to a few months, and to slowly decay in about a year to several years. These eccentric CEJSN impostors will be classified as ‘gap’ objects, i.e. having a luminosity between those of classical novae and typical supernovae (termed also ILOTs for intermediate luminosity optical transients). We strengthen a previous conclusion that CEJSN impostors might account for some peculiar ILOTs, in particular those that might repeat over time-scales of months to years.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Jets from main sequence and white dwarf companions during common envelope evolution

ABSTRACT It has long been speculated that jet feedback from accretion on to the companion during a common envelope (CE) event could affect the orbital evolution and envelope unbinding process. We present global 3D hydrodynamical simulations of CE evolution (CEE) that include a jet subgrid model and compare them with an otherwise identical model without a jet. Our binary consists of a 2-M⊙ red giant branch primary and a 1- or 0.5-M⊙ main sequence (MS) or white dwarf (WD) secondary companion modelled as a point particle. We run the simulations for 10 orbits (40 d). Our jet model adds mass at a constant rate $\dot{M}_\mathrm{j}$ of the order of the Eddington rate, with maximum velocity vj of the order of the escape speed, to two spherical sectors with the jet axis perpendicular to the orbital plane. We explore the influence of the jet on orbital evolution, envelope morphology and envelope unbinding, and assess the dependence of the results on the jet mass-loss rate, launch speed, companion mass, opening angle, and accretion rate. In line with our theoretical estimates, jets are choked around the time of first periastron passage and remain choked thereafter. Subsequent to choking, but not before, jets efficiently transfer energy to bound envelope material. This leads to increases in unbound mass of up to $\sim 10{{\ \rm per\ cent}}$, as compared to the simulations without jets. We also estimate the cumulative effects of jets over a full CE phase, finding that jets launched by MS and WD companions are unlikely to dominate envelope unbinding.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

How negative feedback and the ambient environment limit the influence of recombination in common envelope evolution

ABSTRACT We perform 3D hydrodynamical simulations to study recombination and ionization during the common envelope (CE) phase of binary evolution, and develop techniques to track the ionic transitions in time and space. We simulate the interaction of a $2\, \mathrm{M_\odot }$ red giant branch primary and a $1\, \mathrm{M_\odot }$ companion modelled as a particle. We compare a run employing a tabulated equation of state (EOS) that accounts for ionization and recombination, with a run employing an ideal gas EOS. During the first half of the simulations, ∼15 per cent more mass is unbound in the tabulated EOS run due to the release of recombination energy, but by simulation end the difference has become negligible. We explain this as being a consequence of (i) the tabulated EOS run experiences a shallower inspiral and hence smaller orbital energy release at late times because recombination energy release expands the envelope and reduces drag, and (ii) collision and mixing between expanding envelope gas, ejecta and circumstellar ambient gas assists in unbinding the envelope, but does so less efficiently in the tabulated EOS run where some of the energy transferred to bound envelope gas is used for ionization. The rate of mass unbinding is approximately constant in the last half of the simulations and the orbital separation steadily decreases at late times. A simple linear extrapolation predicts a CE phase duration of ${\sim}2\, {\rm yr}$, after which the envelope would be unbound.

79 ASTRONOMY AND ASTROPHYSICS↗