Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “subset selection”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 433 records · Page 24

Distinct Depth-Discrete Profiles of Microbial Communities and Geochemical Insights in the Subsurface Critical Zone

Microbial assembly and metabolic potential in the subsurface critical zone (SCZ) are substantially impacted by subsurface geochemistry and hydrogeology, selecting for microbes distinct from those in surficial soils. In this study, we integrated metagenomics and geochemistry to elucidate how microbial composition and metabolic potential are shaped and impacted by vertical variations in geochemistry and hydrogeology in terrestrial subsurface sediment. A sediment core from an uncontaminated, pristine well at Oak Ridge Field Research Center in Oak Ridge, Tennessee, including the shallow subsurface, vadose zone, capillary fringe, and saturated zone, was used in this study. Our results showed that subsurface microbes were highly localized and that communities were rarely interconnected. Microbial community composition as well as metabolic potential in carbon and nitrogen cycling varied even over short vertical distances. Further analyses indicated a strong depth-related covariation of community composition with a subset of 12 environmental variables. An analysis of dissolved organic carbon (DOC) quality via ultrahigh resolution mass spectrometry suggested that the SCZ was generally a low-carbon environment, with the relative portion of labile DOC decreasing and that of recalcitrant DOC increasing along the depth, selecting microbes from copiotrophs to oligotrophs and also impacting the microbial metabolic potential in the carbon cycle. Our study demonstrates that sediment geochemistry and hydrogeology are vital in the selection of distinct microbial populations and metabolism in the SCZ.

59 BASIC BIOLOGICAL SCIENCES↗

The Cosmic History of Hot Gas Cooling and Radio AGN Activity in Massive Early-Type Galaxies

We study the X-ray properties of 393 optically selected early-type galaxies (ETGs) over the redshift range of z approx equals 0.0-1.2 in the Chandra Deep Fields. To measure the average X-ray properties of the ETG population, we use X-ray stacking analyses with a subset of 158 passive ETGs (148 of which were individually undetected in X-ray). This ETG subset was constructed to span the redshift ranges of z = 0.1-1.2 in the approx equals 4 Ms CDF-S and approx equals 2 Ms CDF-N and z = 0.1-0.6 in the approx equals 250 ks E-CDF-S where the contribution from individually undetected AGNs is expected to be negligible in our stacking. We find that 55 of the ETGs are detected individually in the X-rays, and 12 of these galaxies have properties consistent with being passive hot-gas dominated systems (i.e., systems not dominated by an X-ray bright Active Galactic Nucleus; AGN). On the basis of our analyses, we find little evolution in the mean 0.5-2 keY to B-band luminosity ratio (L(sub x) /L(sub Beta) varies as [1 +z]) since z approx equals 1.2, implying that some heating mechanism prevents the gas from cooling in these systems. We consider that feedback from radio-mode AGN activity could be responsible for heating the gas. We select radio AGNs in the ETG population using their far-infrared/radio flux ratio. Our radio observations allow us to constrain the duty cycle history of radio AGN activity in our ETG sample. We estimate that if scaling relations between radio and mechanical power hold out to z approx equals 1.2 for the ETG population being studied here, the average mechanical power from AGN activity is a factor of approx equals1.4 -- 2.6 times larger than the average radiative cooling power from hot gas over the redshift range z approx equals 0-1.2. The excess of inferred AGN mechanical power from these ETGs is consistent with that found in the local Universe for similar types of galaxies.

Danielson, A. L. R.↗

Close substellar-mass companions in stellar wide binaries: discovery and characterization with APOGEE and Gaia DR2

We present a search for close, unresolved companions in a subset of spatially resolved Gaia wide binaries containing main-sequence stars within 200 pc of the Sun, utilizing the APOGEE–Gaia Wide Binary Catalog. A catalogue of 37 wide binaries was created by selecting pairs of stars with nearly identical Gaia positions, parallaxes, and proper motions, and then confirming candidates to be gravitationally bound pairs using APOGEE radial velocities. We identify close, unresolved stellar and substellar candidate companions in these multiple systems using (1) the Gaia binary main sequence and (2) observed periodic radial velocity variations in APOGEE measurements due to the influence of a close substellar-mass companion. The studied wide binary pairs reveal a total of four stellar-mass close companions in four different wide binaries, and four substellar-mass close companion candidates in two wide binaries. The latter are therefore quadruple systems, with one substellar-mass companion orbiting each wide binary component in an S-type orbit. Taken at face value, these candidate systems represent an enhancement of an order of magnitude over the expected occurrence rate of ~2 percent of stars having substellar companions >2 M Jup within ~100-d orbits; we discuss implications and possible explanations for this result. Finally, we compare chemical differences between the components of the wide binaries and the components of the candidate higher-order systems and find that any chemical influence or correlation due to the presence of close companions to wide binary stars is not discernible.

79 ASTRONOMY AND ASTROPHYSICS↗

BOREAS TE-23 Map Plot Data

The Boreal Ecosystem-Atmospheric Study (BOREAS) TE-23 (Terrestrial Ecology) team collected map plot data in support of its efforts to characterize and interpret information on canopy architecture and understory cover at the BOREAS tower flux sites and selected auxiliary sites from May to August 1994. Mapped plots (typical dimensions 50 m x 60 m) were set up and characterized at all BOREAS forested tower flux and selected auxiliary sites. Detailed measurement of the mapped plots included: (1) stand characteristics (location, density, basal area); (2) map locations diameter at breast height (DBH) of all trees; (3) detailed geometric measures of a subset of trees (height, crown dimensions); and (4) understory cover maps. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Rich, Paul M.↗

The Dark Energy Survey Bright Arcs Survey: Candidate Strongly Lensed Galaxy Systems from the Dark Energy Survey 5000 Square Degree Footprint

We report the combined results of eight searches for strong gravitational lens systems in the full 5000 square degrees of Dark Energy Survey (DES) observations. The observations accumulated by the end of the third observing season fully covered the DES footprint in five filters (grizY), with an i-band limiting magnitude (at 10σ) of 23.44. In four searches, a list of potential candidates was identified using a color and magnitude selection from the object catalogs created from the first three observing seasons. Three other searches were conducted at the locations of previously identified galaxy clusters. Cutout images of potential candidates were then visually scanned using an object viewer. An additional set of candidates came from a data-quality check of a subset of the color–coadd tiles created from the full DES six-season data set. A short list of the most promising strong-lens candidates was then numerically ranked according to whether or not we judged them to be bona fide strong gravitational lens systems. These searches discovered a diverse set of 247 strong-lens candidate systems, of which 81 are identified for the first time. We provide the coordinates, magnitudes, and photometric properties of the lens and source objects, and an estimate of the Einstein radius for 81 new systems and 166 previously reported systems. This catalog will be of use for selecting interesting systems for detailed follow up, studies of galaxy cluster and group mass profiles, as well as a training/validation set for automated strong-lens searches.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Identifying Shocked Feldspar on Mars Using Perseverance Spectroscopic Instruments: Implications for Geochronology Studies on Returned Samples

The Perseverance rover (Mars 2020) mission, the first step in NASA’s Mars Sample Return (MSR) program, will select samples for caching based on their potential to improve understanding Mars’ astrobiological, geological, geochemical, and climatic evolution. Geochronologic analyses will be among the key measurements planned for returned samples. Assessing a sample’s shock history will be critical because shock metamorphism could influence apparent sample age. Shock effects in one Mars-relevant mineral class, plagioclase feldspar, have been well- documented using various spectroscopy techniques (thermal infrared reflectance, emission, and transmission spectroscopy, Raman, and luminescence). A subset of these data will be obtained with the SuperCam and SHERLOC (Scanning Habitable Environments with Raman & Luminescence for Organics & Chemicals) instruments onboard Perseverance to inform caching decisions for MSR. Here, we review shock indicators in plagioclase feldspar as revealed in Raman, luminescence, and IR spectroscopy lab data, with an emphasis on Raman spectroscopy. We consider how this information may inform caching decisions for selecting optimal samples for geochronology measurements. We then identify challenges and make recommendations for both in situ measurements performed with SuperCam and SHERLOC and for supporting lab studies to enhance the success of geochronologic analyses after return to Earth.

mars↗

Structural basis for the specificity of PPM1H phosphatase for Rab GTPases

LRRK2 serine/threonine kinase is associated with inherited Parkinson’s disease. LRRK2 phosphorylates a subset of Rab GTPases within their switch 2 motif to control their interactions with effectors. Recent work has shown that the metal-dependent protein phosphatase PPM1H counteracts LRRK2 by dephosphorylating Rabs. PPM1H is highly selective for LRRK2 phosphorylated Rabs, and closely related PPM1J exhibits no activity towards substrates such as Rab8a phosphorylated at Thr72 (pThr72). Here, we have identified the molecular determinant of PPM1H specificity for Rabs. The crystal structure of PPM1H reveals a structurally conserved phosphatase fold that strikingly has evolved a 110-residue flap domain adjacent to the active site. The flap domain distantly resembles tudor domains that interact with histones in the context of epigenetics. Cellular assays, crosslinking and 3-D modelling suggest that the flap domain encodes the docking motif for phosphorylated Rabs. Consistent with this hypothesis, a PPM1J chimaera with the PPM1H flap domain dephosphorylates pThr72 of Rab8a both in vitro and in cellular assays. Therefore, PPM1H has acquired a Rab-specific interaction domain within a conserved phosphatase fold.

60 APPLIED LIFE SCIENCES↗

Feature selection methodologies using simulated Thematic Mapper data

The present investigation is concerned with the determination of the intrinsic dimensionality of a simulated Thematic Mapper data set. In addition, the effectiveness and sensitivity of 'standard' statistics separability measures (i.e., transformed divergence) is evaluated in comparison to eigenvectors for identifying the optimum subset of the original Thematic Mapper Simulator (TMS) bands for classifying the various cover types. TMS data were collected on May 2, 1979 by NASA's NS001 aircraft multispectral scanner over a bottomland forested area in South Carolina near the city of Camden. It is found that the eigenvectors and eigenvalues of a covariance matrix from a multispectral scanner system (MSS) data set can be obtained without having to actually transform the data.

Dean, M. E.↗

Cloud Classification in Polar and Desert Regions and Smoke Classification from Biomass Burning Using a Hierarchical Neural Network

This research focuses on a new neural network scene classification technique. The task is to identify scene elements in Advanced Very High Resolution Radiometry (AVHRR) data from three scene types: polar, desert and smoke from biomass burning in South America (smoke). The ultimate goal of this research is to design and implement a computer system which will identify the clouds present on a whole-Earth satellite view as a means of tracking global climate changes. Previous research has reported results for rule-based systems (Tovinkere et at 1992, 1993) for standard back propagation (Watters et at. 1993) and for a hierarchical approach (Corwin et al 1994) for polar data. This research uses a hierarchical neural network with don't care conditions and applies this technique to complex scenes. A hierarchical neural network consists of a switching network and a collection of leaf networks. The idea of the hierarchical neural network is that it is a simpler task to classify a certain pattern from a subset of patterns than it is to classify a pattern from the entire set. Therefore, the first task is to cluster the classes into groups. The switching, or decision network, performs an initial classification by selecting a leaf network. The leaf networks contain a reduced set of similar classes, and it is in the various leaf networks that the actual classification takes place. The grouping of classes in the various leaf networks is determined by applying an iterative clustering algorithm. Several clustering algorithms were investigated, but due to the size of the data sets, the exhaustive search algorithms were eliminated. A heuristic approach using a confusion matrix from a lightly trained neural network provided the basis for the clustering algorithm. Once the clusters have been identified, the hierarchical network can be trained. The approach of using don't care nodes results from the difficulty in generating extremely complex surfaces in order to separate one class from all of the others. This approach finds pairwise separating surfaces and forms the more complex separating surface from combinations of simpler surfaces. This technique both reduces training time and improves accuracy over the previously reported results. Accuracies of 97.47%, 95.70%, and 99.05% were achieved for the polar, desert and smoke data sets.

Alexander, June↗

Development of Large-Scale Thrust Chambers using Laser Powder Directed Energy Deposition

Historical manufacturing methods for liquid propulsion combustion chambers have relied on series of tube-walls or slotted channel walls (subsequently brazed or plated) for regenerative cooling paths. Large-scale additive manufacturing techniques offer strong potential to minimize manufacturing lead times and cost for developing liquid propulsion chambers, while maintaining performance metrics of traditionally manufactured hardware. The benefits expand beyond traditional combustion chambers to lesser considered nuclear thermal propulsion chambers where radiation energizes the singular incoming propellant stream instead of an exothermic chemical reaction. While each subset of liquid propulsion chambers reaps similar benefit, the geometric challenges in each design can vary substantially. This manuscript discusses the challenges of large contraction ratio propulsion chambers, bimetallic liners and closeout jackets, and material selection when considering laser powder directed energy deposition. LP-DED presently offers build volumes unattainable by L-PBF systems, required for large diameter thrust chambers. LP-DED typically has faster deposition time and is capable of overhang angles without support material (due to the ability to tilt the build plate and minimize the actual build angle). These benefits come at the cost of feature resolution. Designers and manufacturers should consider the effects of thick-wall features printed parallel to the primary surface versus perpendicular due to distortion. Thick-wall and thin-wall features printed in the same plane can substantially increase build time. Where large-scale L-PBF overlaps in size, there may be limited benefit in the quantity of powder required for the build due to the low capture rate of LP-DED and a case-by-case examination is required.

LP-DED↗

Sequential Perturbation-based FDIA Detection using DERs for Unbalanced Distribution System

The power distribution system with its reliance on automated monitoring and control infrastructure makes it a complicated cyber-physical system and vulnerable to various cyber-attacks. This paper proposes a moving target defense inspired false data injection attack (FDIA) detection mechanism for an unbalanced distribution system. In the proposed grid diagnosis service framework, the distribution system operator judiciously manipulates power outputs of a subset of inverter-based distribution energy resources (DERs) to create secret low magnitude voltage perturbations which are inconsequential to the normal operation of the grid. A mixed-integer-linear-programming algorithm is developed to select the optimal set of DERs that can create a voltage perturbation signal of the required magnitude at each sensor location at a minimum cost. Then, a sequential detector is applied that detects for the FDIA as measurements are received from individual sensors. The performance of the proposed perturbation-based FDIA detection framework is demonstrated via simulation of the IEEE 123 bus test system.

Attack Detection↗

Characterization of Multiple Trichloroethene, cis-Dichloroethene and 1,1-Dichloroethene Degrading Propanotrophic Communities

Aerobic cometabolism offers a viable strategy for the remediation of chlorinated solvent plumes at oxic sites where anaerobic approaches are limited. In this study, propane-enriched mixed cultures (derived from agricultural soils and an impacted site sediment) which previously degraded 1,4-dioxane, were evaluated for their capacity to also degrade trichloroethene (TCE), cis-1,2-dichloroethene (cDCE), and 1,1-dichloroethene (1,1-DCE) over successive transfers. Sustained biodegradation of TCE and cDCE was observed across multiple enrichments, and cultures enriched on one compound generally degraded the other. In contrast, 1,1-DCE biodegradation was restricted to a subset of cultures and removal times increased over transfers. Further, 1,1-DCE removal was absent at elevated concentrations, both trends consistent with inhibitory or toxic effects. Whole genome sequencing analyses revealed pronounced substrate-dependent selection of microbial communities, with cDCE-degrading cultures being dominated by Mycobacterium and Mycolicibacterium, whereas TCE-degrading cultures were dominated by Rhodococcus. Rhodococcus metagenome-assembled genomes (MAGs) in the TCE degrading cultures classified as R. opacus or R. wratislaviensis. 1,1-DCE degrading cultures were dominated by Pseudonocardia, although the associated MAGs contained a truncated propane monooxygenase alpha subunit. Functional gene analysis identified both group 5 (prmABCD) and putative group 6 propane monooxygenases. The following KBase narratives contain the quality controlled reads, MAGs (fasta assemblies) and the prokka annotations for each assembly TCE Site 1A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254918) TCE Soil 2A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254919) TCE Soil T3 A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254920) TCE Soil T4 A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254921) cDCE Site 1A 1B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254915) cDCE Soils T2 A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254927) cDCE Soil T3 A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254928) cDCE Soil 4A and B Propanotrophic MAGs (https://narrative.kbase.us/narrative/254942) 1,1-DCE T2 T3 Propanotrophic MAGs (https://narrative.kbase.us/narrative/254903)

59 BASIC BIOLOGICAL SCIENCES↗

Synthetic Streamflow Datasets Derived from DOE 9505 for Select Texas Basins

This dataset is generated using a Bayesian Hidden Markov Model trained on the DOE 9505 streamflow projection ensemble. A set of 21,000 streamflow realizations are generated for the Colorado, Sabine, and Trinity river basins in Texas. Separate models are trained either using the full 9505 ensemble or a subset based on three hyperparameters: bias correction, downscaling, and hydrological model.

drought↗

Remote sensing of hydrologic variables in boreal areas, phase 1

The major effort by HYD-6 members has been to develop a network of flight lines to provide the maximum amount of information on the temporal and spatial variation in soil moisture for the Boreal Ecosystem Atmosphere Study (BOREAS) study areas. Field visits to the southern study area (SSA) were conducted during May 1993 to obtain first hand information on the flight lines that had been previously selected for BOREAS snow studies. In September 1993 airborne gamma radiation surveys were conducted over the SSA, the northern study area (NSA), and for five flight lines along the transect between the two study areas. In situ measurements of soil moisture and water content of the moss/humus layer were obtained for calibration of selected gamma radiation flights lines in the SSA and for two of the transit lines. The flight lines for which soil moisture will be measured during the three IFC's during the summer of 1994 is a subset of the total flight lines that have been flown for the snow surveys. During the WFC in February 1994, airborne gamma radiation surveys were flown over all of the flight lines. Members of HYD-4 collected in-situ measurements (soil moisture, water content of the moss/humus layer, and water equivalent of the snow cover).

Peck, Eugene L.↗

Algebraic Multigrid by Smoothed Aggregation for Second and Fourth Order Elliptic Problems

Multigrid methods are very efficient iterative solvers for system of algebraic equations arising from finite element and finite difference discretization of elliptic boundary value problems. The main principle of multigrid methods is to complement the local exchange of information in point-wise iterative methods by a global one utilizing several related systems, called coarse levels, with a smaller number of variables. The coarse levels are often obtained as a hierarchy of discretizations with different characteristic meshsizes, but this requires that the discretization is controlled by the iterative method. To solve linear systems produced by existing finite element software, one needs to create an artificial hierarchy of coarse problems. The principal issue is then to obtain computational complexity and approximation properties similar to those for nested meshes, using only information in the matrix of the system and as little extra information as possible. Such algebraic multigrid method that uses the system matrix only was developed by Ruge. The prolongations were based on the matrix of the system by partial solution from given values at selected coarse points. The coarse grid points were selected so that each point would be interpolated to via so-called strong connections. Our approach is based on smoothed aggregation introduced recently by Vanek. First the set of nodes is decomposed into small mutually disjoint subsets. A tentative piecewise constant interpolation (in the discrete sense) is then defined on those subsets as piecewise constant for second order problems, and piecewise linear for fourth order problems. The prolongation operator is then obtained by smoothing the output of the tentative prolongation and coarse level operators are defined variationally.

Vanek, Petr↗

Uniform-in-phase-space data selection with iterative normalizing flows

Improvements in computational and experimental capabilities are rapidly increasing the amount of scientific data that are routinely generated. In applications that are constrained by memory and computational intensity, excessively large datasets may hinder scientific discovery, making data reduction a critical component of data-driven methods. Datasets are growing in two directions: the number of data points and their dimensionality. Whereas dimension reduction typically aims at describing each data sample on lower-dimensional space, the focus here is on reducing the number of data points. A strategy is proposed to select data points such that they uniformly span the phase-space of the data. The algorithm proposed relies on estimating the probability map of the data and using it to construct an acceptance probability. An iterative method is used to accurately estimate the probability of the rare data points when only a small subset of the dataset is used to construct the probability map. Instead of binning the phase-space to estimate the probability map, its functional form is approximated with a normalizing flow. Therefore, the method naturally extends to high-dimensional datasets. The proposed framework is demonstrated as a viable pathway to enable data-efficient machine learning when abundant data are available.

97 MATHEMATICS AND COMPUTING↗

Discovery of highly potent and ALK2/ALK1 selective kinase inhibitors using DNA-encoded chemistry technology

Activin receptor type 1 (ACVR1; ALK2) and activin receptor like type 1 (ACVRL1; ALK1) are transforming growth factor beta family receptors that integrate extracellular signals of bone morphogenic proteins (BMPs) and activins into Mothers Against Decapentaplegic homolog 1/5 (SMAD1/SMAD5) signaling complexes. Several activating mutations in ALK2 are implicated in fibrodysplasia ossificans progressiva (FOP), diffuse intrinsic pontine gliomas, and ependymomas. The ALK2 R206H mutation is also present in a subset of endometrial tumors, melanomas, non-small lung cancers, and colorectal cancers, and ALK2 expression is elevated in pancreatic cancer. Using DNA-encoded chemistry technology, we screened 3.94 billion unique compounds from our diverse DNA-encoded chemical libraries (DECLs) against the kinase domain of ALK2. Off-DNA synthesis of DECL hits and biochemical validation revealed nanomolar potent ALK2 inhibitors. Further structure-activity relationship studies yielded center for drug discovery (CDD)-2789, a potent [NanoBRET (NB) cell IC50: 0.54 μM] and metabolically stable analog with good pharmacological profile. Crystal structures of ALK2 bound with CDD-2281, CDD-2282, or CDD-2789 show that these inhibitors bind the active site through Van der Waals interactions and solvent-mediated hydrogen bonds. CDD-2789 exhibits high selectivity toward ALK2/ALK1 in KINOMEscan analysis and NB K192 assay. In cell-based studies, ALK2 inhibitors effectively attenuated activin A and BMP-induced Phosphorylated SMAD1/5 activation in fibroblasts from individuals with FOP in a dose-dependent manner. Thus, CDD-2789 is a valuable tool compound for further investigation of the biological functions of ALK2 and ALK1 and the therapeutic potential of specific inhibition of ALK2.

Jimmidi, Ravikumar↗

Tethered oxygen turns methane into methanol

Precise control of the oxidant — that is, preventing overoxidation — is the missing link in low-temperature methane upgrading. Now, the electro-splitting of carbonate on rutile IrO 2 is shown to cover the surface with on-top oxygen adatoms that act as tethered, single-step hydrogen abstractors. One subset can pull the hydrogen from methane to form a methoxy intermediate, while the neighbouring site can protonate this intermediate to form methanol. Together, this mechanism delivers a room-temperature conversion of methane to methanol with >90% selectivity.

climate-change mitigation↗