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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 433 records · Page 24

Leveraging Large Language Models for Understanding Fundamental Principles of Catalysis

Heterogeneous catalysis presents a distinct challenge for artificial intelligence (AI). Data sets are often small and inconsistently reported, catalyst representations are not standardized, and extracting fundamental knowledge requires integrating performance data, spectroscopic characterizations, and mechanistic models across multiple scales. Language offers a unifying representation across these modalities, making catalysis well suited for leveraging large language models (LLMs). By standardizing how catalytic data is represented, LLMs make dispersed experimental results more accessible to downstream statistical modeling. In this perspective, we focus our discussion around three opportunities where LLMs can significantly contribute to catalysis: (1) text to properties; (2) text to structure; and (3) text to mechanistic models. The discussion is followed by a perspective section on LLM-readiness of data, aligning LLM outputs with scientific correctness, and bridging lab-scale discovery to industrial deployment. Across each area, the most productive applications couple dispersed chemical knowledge with physics-grounded validation to produce verifiable hypotheses and actionable representations.

Catalysts↗

Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance

For many species, vision is one of the most important sensory modalities for mediating essential tasks that include navigation, predation and foraging, predator avoidance, and numerous social behaviors. The vertebrate visual process begins when photons of the light interact with rod and cone photoreceptors that are present in the neural retina. Vertebrate visual photopigments are housed within these photoreceptor cells and are sensitive to a wide range of wavelengths that peak within the light spectrum, the latter of which is a function of the type of chromophore used and how it interacts with specific amino acid residues found within the opsin protein sequence. Minor differences in the amino acid sequences of the opsins are known to lead to large differences in the spectral peak of absorbance (i.e. the λ max value). In our prior studies, we developed a new approach that combined homology modeling and molecular dynamics simulations to gather structural information associated with chromophore conformation, then used it to generate statistical models for the accurate prediction of λ max values for photopigments derived from Rh1 and Rh2 amino acid sequences. In the present study, we test our novel approach to predict the λ max of phylogenetically distant Sws2 cone opsins. To build a model that can predict the λ max using our approach presented in our prior studies, we selected a spectrally-diverse set of 11 teleost Sws2 photopigments for which both amino acid sequence information and experimentally measured λ max values are known. The final first-order regression model, consisting of three terms associated with chromophore conformation, was sufficient to predict the λ max of Sws2 photopigments with high accuracy. This study further highlights the breadth of our approach in reliably predicting λ max values of Sws2 cone photopigments, evolutionary-more distant from template bovine RH1, and provided mechanistic insights into the role of known spectral tuning sites.

59 BASIC BIOLOGICAL SCIENCES↗

Understanding the relation between wind- and pressure-driven sea level variability

Sea surface adjustment to combined wind and pressure forcing is examined using numerical solutions to the shallow water equations. The experiments use coastal geometry and bottom topography representative of the North Atlantic and are forced by realistic barometric pressure and wind stress fields. The repsonse to pressure is essentially static or close to the inverted barometer solution at periods longer than a few days and dominates the sea level variability, with wind-driven sea level signals being relatively small. With regard to the dynamic signals, wind-driven fluctuations dominate at long periods, as expected from quasi-geostrophic theory. Pressure becomes more important than wind stress as a source of dynamic signals only at periods shorter than approximately three days. Wind- and pressure-driven sea level fluctuations are anticorrelated over most regions. Hence, regressions of sea level on barometric pressure yield coefficients generally smaller than expected for the inverted barometer response known to be the case in the model. In the regions of significant wind-pressure correlation effects, to infer the correct pressure reponse using statistical methods, input fields must include winds as well as pressure. Because of the nonlocal character of the wind response, multivariate statistical models with local wind driving as input are not very successful. Inclusion of nonlocal wind variability over extensive regions is necessary to extract the correct pressure response. Implications of these results to the interpretation of sea level observations are discussed.

Ponte, Rui M.↗

Modeling the Atmospheric Phase Effects of a Digital Antenna Array Communications System

In an antenna array system such as that used in the Deep Space Network (DSN) for satellite communication, it is often necessary to account for the effects due to the atmosphere. Typically, the atmosphere induces amplitude and phase fluctuations on the transmitted downlink signal that invalidate the assumed stationarity of the signal model. The degree to which these perturbations affect the stationarity of the model depends both on parameters of the atmosphere, including wind speed and turbulence strength, and on parameters of the communication system, such as the sampling rate used. In this article, we focus on modeling the atmospheric phase fluctuations in a digital antenna array communications system. Based on a continuous-time statistical model for the atmospheric phase effects, we show how to obtain a related discrete-time model based on sampling the continuous-time process. The effects of the nonstationarity of the resulting signal model are investigated using the sample matrix inversion (SMI) algorithm for minimum mean-squared error (MMSE) equalization of the received signal

Tkacenko, A.↗

Post-flight Analysis of Atmospheric Properties from Mars 2020 Entry, Descent, and Landing

The Mars 2020 spacecraft landed the Perseverance rover and Ingenuity helicopter successfully in Jezero crater on Feb. 18, 2021. The entry, descent, and landing (EDL) sequence of the spacecraft largely leveraged the previous Mars Science Laboratory (MSL) mission. The atmospheric modeling approach for Mars 2020 was also borrowed from MSL, and consisted of utilizing two mesoscale atmospheric models of the landing site during the Martian season of landing, and using that data to create a statistical model of the pressure, density, temperature, and winds that Mars 2020 could have expected to encounter. Additionally, Mars 2020 contained an optical sensor - Landing Vision System (LVS) - that relied on taking pictures of the terrain, and was sensitive to the dust opacity of the atmosphere. This paper will briefly describe the pre-flight atmospheric models used for Mars 2020, but will focus on post-flight assessment of these models by comparing them to near-landing day orbiter sounder data and onboard atmospheric measurements. Suggestions for potential model changes will be also discussed.

Soumyo Dutta↗

Post-flight Analysis of Atmospheric Properties from Mars 2020 Entry, Descent, and Landing

The Mars 2020 spacecraft landed the Perseverance rover and Ingenuity helicopter successfully in Jezero crater on Feb. 18, 2021. The entry, descent, and landing (EDL) sequence of the spacecraft largely leveraged the previous Mars Science Laboratory (MSL) mission. The atmospheric modeling approach for Mars 2020 was also borrowed from MSL, and consisted of utilizing two mesoscale atmospheric models of the landing site during the Martian season of landing, and using that data to create a statistical model of the pressure, density, temperature, and winds that Mars 2020 could have expected to encounter. Additionally, Mars 2020 contained an optical sensor - Landing Vision System (LVS) - that relied on taking pictures of the terrain, and was sensitive to the dust opacity of the atmosphere. This paper will briefly describe the pre-flight atmospheric models used for Mars 2020, but will focus on post-flight assessment of these models by comparing them to near-landing day orbiter sounder data and onboard atmospheric measurements. Suggestions for potential model changes will be also discussed.

Soumyo Dutta↗

Predictions Of Fatigue Damage From Strain Histories

Semiempirical mathematical model of fatigue damage in stressed objects uses experimental histories of strains in those objects to predict fatigue lives. Accounts for initiation and propagation of fatigue cracks on cycle-by-cycle basis. Measured strain history first digitized, then converted to history of turning-point strains for purposes of analysis. Data between turning points not used. When model calibrated against proper test data for each type of object characterized, its predictions of fatigue lives superior to statistical models as one based on root-mean-square strain.

Sire, Robert A.↗

Progress and challenges in modeling turbulent aerodynamic flows

Progress in modeling external aerodynamic flows achieved by using computations and experiments designed to guide turbulence modeling is presented. The computational procedures emphasize utilization of the Reynolds-averaged Navier-Stokes equations and various statistical modeling approaches. Developments for including the influence of compressibility are provided; they point up some of the complexities involved in modeling high-speed flows. Examples of complementary studies that provide the status, limitations, and future challenges of modeling for transonic, supersonic, and hypersonic flows are given.

Marvin, Joseph G.↗

Assessing correlated truncation errors in modern nucleon-nucleon potentials

We test the BUQEYE model of correlated effective field theory (EFT) truncation errors on Reinert, Krebs, and Epelbaum's semilocal momentum-space implementation of the chiral EFT (𝜒⁢EFT ) expansion of the nucleon-nucleon (NN) potential. This Bayesian model hypothesizes that dimensionless coefficient functions extracted from the order-by-order corrections to NN observables can be treated as draws from a Gaussian process (GP). We combine a variety of graphical and statistical diagnostics to assess when predicted observables have a 𝜒⁢EFT convergence pattern consistent with the hypothesized GP statistical model. Our conclusions are that, first, the BUQEYE model is generally applicable to the potential investigated here, which enables statistically principled estimates of the impact of higher EFT orders on observables. Second, parameters defining the extracted coefficients such as the expansion parameter 𝑄 must be well chosen for the coefficients to exhibit a regular convergence pattern—a property we exploit to obtain posterior distributions for such quantities. Third, the assumption of GP stationarity across lab energy and scattering angle is not generally met; this necessitates adjustments in future work. We provide a workflow and interpretive guide for our analysis framework, and show what can be inferred about probability distributions for 𝑄, the EFT breakdown scale Λ 𝑏 , the scale associated with soft physics in the 𝜒⁢EFT potential 𝑚 eff , and the GP hyperparameters. All our results can be reproduced using a publicly available Jupyter notebook, which can be straightforwardly modified to analyze other 𝜒⁢EFT NN potentials.

Bayesian methods↗

A Management Information System Model for Program Management

The development of a model to simulate the information system of a program management type of organization is reported. The model statistically determines the following parameters: type of messages, destinations, delivery durations, type processing, processing durations, communication channels, outgoing messages, and priorites. The total management information system of the program management organization is considered, including formal and informal information flows and both facilities and equipment. The model is written in General Purpose System Simulation 2 computer programming language for use on the Univac 1108, Executive 8 computer. The model is simulated on a daily basis and collects queue and resource utilization statistics for each decision point. The statistics are then used by management to evaluate proposed resource allocations, to evaluate proposed changes to the system, and to identify potential problem areas. The model employs both empirical and theoretical distributions which are adjusted to simulate the information flow being studied.

Shipman, D. L.↗

Discovering the Unknowns: A First Step

This article aims at discovering the unknown variables in the system through data analysis. The main idea is to use the time of data collection as a surrogate variable and try to identify the unknown variables by modeling gradual and sudden changes in the data. We use Gaussian process modeling and a sparse representation of the sudden changes to efficiently estimate the large number of parameters in the proposed statistical model. The method is tested on a realistic dataset generated using a one-dimensional implementation of a Magnetized Liner Inertial Fusion (MagLIF) simulation model, and encouraging results are obtained.

42 ENGINEERING↗

Experimentally Inferred Fusion Yield Dependencies of OMEGA Inertial Confinement Fusion Implosions

Statistical modeling of experimental and simulation databases has enabled the development of an accurate predictive capability for deuterium-tritium layered cryogenic implosions at the OMEGA laser. Here, a physics-based statistical mapping framework is described and used to uncover the dependencies of the fusion yield. This model is used to identify and quantify the degradation mechanisms of the fusion yield in direct-drive implosions on OMEGA. The yield is found to be reduced by the ratio of laser beam to target radius, the asymmetry in inferred ion temperatures from the $l$ = 1 mode, the time span over which tritium fuel has decayed, and parameters related to the implosion hydrodynamic stability. When adjusted for tritium decay and $l$ = 1 mode, the highest yield in OMEGA cryogenic implosions is predicted to exceed 2 × 10 14 fusion reactions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Identifying microbial drivers in biological phenotypes with a Bayesian network regression model

Abstract In Bayesian Network Regression models, networks are considered the predictors of continuous responses. These models have been successfully used in brain research to identify regions in the brain that are associated with specific human traits, yet their potential to elucidate microbial drivers in biological phenotypes for microbiome research remains unknown. In particular, microbial networks are challenging due to their high dimension and high sparsity compared to brain networks. Furthermore, unlike in brain connectome research, in microbiome research, it is usually expected that the presence of microbes has an effect on the response (main effects), not just the interactions. Here, we develop the first thorough investigation of whether Bayesian Network Regression models are suitable for microbial datasets on a variety of synthetic and real data under diverse biological scenarios. We test whether the Bayesian Network Regression model that accounts only for interaction effects (edges in the network) is able to identify key drivers (microbes) in phenotypic variability. We show that this model is indeed able to identify influential nodes and edges in the microbial networks that drive changes in the phenotype for most biological settings, but we also identify scenarios where this method performs poorly which allows us to provide practical advice for domain scientists aiming to apply these tools to their datasets. BNR models provide a framework for microbiome researchers to identify connections between microbes and measured phenotypes. We allow the use of this statistical model by providing an easy‐to‐use implementation which is publicly available Julia package at https://github.com/solislemuslab/BayesianNetworkRegression.jl .

59 BASIC BIOLOGICAL SCIENCES↗

Adaptation Strategies Strongly Reduce the Future Impacts of Climate Change on Simulated Crop Yields

Abstract Simulations of crop yield due to climate change vary widely between models, locations, species, management strategies, and Representative Concentration Pathways (RCPs). To understand how climate and adaptation affects yield change, we developed a meta‐model based on 8703 site‐level process‐model simulations of yield with different future adaptation strategies and climate scenarios for maize, rice, wheat and soybean. We tested 10 statistical models, including some machine learning models, to predict the percentage change in projected future yield relative to the baseline period (2000–2010) as a function of explanatory variables related to adaptation strategy and climate change. We used the best model to produce global maps of yield change for the RCP4.5 scenario and identify the most influential variables affecting yield change using Shapley additive explanations. For most locations, adaptation was the most influential factor determining the projected yield change for maize, rice and wheat. Without adaptation under RCP4.5, all crops are expected to experience average global yield losses of 6%–21%. Adaptation alleviates this average projected loss by 1–13 percentage points. Maize was most responsive to adaptive practices with a projected mean yield loss of −21% [range across locations: −63%, +3.7%] without adaptation and −7.5% [range: −46%, +13%] with adaptation. For maize and rice, irrigation method and cultivar choice were the adaptation types predicted to most prevent large yield losses, respectively. When adaptation practices are applied, some areas are predicted to experience yield gains, especially at northern high latitudes. These results reveal the critical importance of implementing adequate adaptation strategies to mitigate the impact of climate change on crop yields.

54 ENVIRONMENTAL SCIENCES↗

Spectral estimation of green leaf area index of oats

Green leaf area index (LAI) is a measure of vegetative growth and development and is frequently used as an input parameter in yield estimation and evapotranspiration models. Extensive destructive sampling is usually required to achieve accurate estimates of green LAI in natural situations. In this investigation, a statistical modeling approach was used to predict the green LAI of oats from bidirectional reflectance data collected with multiband radiometers. Stepwise multiple regression models based on two sets of spectral reflectance factors accounted for 73 percent and 65 percent of the variance in green LAI of oats. Exponential models of spectral data transformations of greenness, normalized difference, and near-infrared/red ratio accounted for more of the variance in green LAI than the multiple regression models.

Best, R. G.↗

A comparison of precipitating electron energy flux on March 22, 1979 with an empirical model - CDAW 6

Data recorded by Defense Meteorological Satellite Program, Tiros and P-78-1 satellites for the CDAW 6 event on March 22, 1979, have been compared with a statistical model of precipitating electron fluxes. Comparisons have been made on both an orbit-by-orbit basis and on a global basis by sorting and binning the data by AE index, invariant latitude, and magnetic local time in a manner similar to which the model was generated. It is concluded that the model flux agrees with the data to within a factor of two, although small features and the exact locations of features are not consistently reproduced. In addition, the latitude of highest electron precipitation usually occurs about 3 deg more poleward in the model than in the data. This discrepancy is attributed to ring current inflation of the storm time magnetosphere.

Simons, S. L., Jr.↗

Sea surface temperature anomalies, planetary waves, and air-sea feedback in the middle latitudes

Current analytical models for large-scale air-sea interactions in the middle latitudes are reviewed in terms of known sea-surface temperature (SST) anomalies. The scales and strength of different atmospheric forcing mechanisms are discussed, along with the damping and feedback processes controlling the evolution of the SST. Difficulties with effective SST modeling are described in terms of the techniques and results of case studies, numerical simulations of mixed-layer variability and statistical modeling. The relationship between SST and diabatic heating anomalies is considered and a linear model is developed for the response of the stationary atmosphere to the air-sea feedback. The results obtained with linear wave models are compared with the linear model results. Finally, sample data are presented from experiments with general circulation models into which specific SST anomaly data for the middle latitudes were introduced.

Frankignoul, C.↗