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At least 433 records · Page 24

Empirical high-latitude electric field models

The present analysis of electric field measurements from the Dynamics Explorer 2 satellite, which extends previous empirical models, emcompasses much data from polar crossings entering and exiting the high latitudes in all magnetic local time zones. The goal is to represent the typical distributions of convective electric fields with a minimum number of characteristic patterns. Significant large-scale revisions of the OGO 6 dawn-dusk measurement models are made. The deformations of the two-cell patterns lead to sunward convection in dayside polar regions, while maintaining the integrity of the nightside convection pattern.

Heppner, J. P.↗

Quiet-time intensifications along the poleward auroral boundary near midnight

Radar and optical measurements from Sondrestrom are combined with satellite and Goose Bay data in a study of the poleward edge of the nightside auroral oval during a quiet period. The B(sub y) and B(sub z) components of the interplanetary magnetic field were close to zero, and the B(sub x) component was approximately 8 nT for more than 24 hours. On a large scale, the convection and precipitation patterns remained almost constant during this period; on a small scale, however, the conditions were quite dynamic. At 10- to 20-min intervals the arc that marked the poleward auroral boundary intensified, and a new arc appeared poleward of it. About once per hour, stronger intensifications were observed. One such event is examined in detail. The auroral arcs first appeared to dim, and then they brightened, with a factor of 10 increase in E region electron density. At the time of the brightening a new arc formed poleward of all the arcs. The arcs then drifted southward at velocities of approximately 270 m/s. A plasma drift disturbance, characterized by a doubling of the southward velocity and a reversal in the east-west component, propagated westward at 900 m/s through the fields of view of the Sondrestrom and Goose Bay radars. A simultaneous satellite overpass close to the radars revealed the presence of an energetic ion event similar to the 'velocity dispersed ion structures' observed on the Aureol satellite and presumed to be the signature of fast ion beams within the plasma sheet boundary layer. The stronger arc intensification events observed by the Sondrestrom radar are associated with an increase in plasma flow across the boundary between open and closed magnetic field lines. We interpret this increased flow as the ionospheric signature of abrupt, localized increases in the reconnection rate in the midnight sector.

De La Beaujardiere, O.↗

PLEXUS: A Pattern-Oriented Runtime System Architecture for Resilient Extreme-Scale High-Performance Computing Systems

For high-performance computing (HPC) system designers and users, meeting the myriad challenges of next-generation exascale supercomputing systems requires rethinking their approach to application and system software design. Among these challenges, providing resiliency and stability to the scientific applications in the presence of high fault rates requires new approaches to software architecture and design. As HPC systems become increasingly complex, they require intricate solutions for detection and mitigation for various modes of faults and errors that occur in these large-scale systems, as well as solutions for failure recovery. These resiliency solutions often interact with and affect other system properties, including application scalability, power and energy efficiency. Therefore, resilience solutions for HPC systems must be thoughtfully engineered and deployed.In previous work, we developed the concept of resilience design patterns, which consist of templated solutions based on well-established techniques for detection, mitigation and recovery. In this paper, we use these patterns as the foundation to propose new approaches to designing runtime systems for HPC systems. The instantiation of these patterns within a runtime system enables flexible and adaptable end-to-end resiliency solutions for HPC environments. The paper describes the architecture of the runtime system, named Plexus, and the strategies for dynamically composing and adapting pattern instances under runtime control. This runtime-based approach enables actively balancing the cost-benefit trade-off between performance overhead and protection coverage of the resilience solutions. Based on a prototype implementation of PLEXUS, we demonstrate the resiliency and performance gains achieved by the pattern-based runtime system for a parallel linear solver application.

Hukerikar, Saurabh↗

Counting Magnetic Bipoles on the Sun by Polarity Inversion

This paper presents a simple and efficient algorithm for deriving images of polarity inversion from NSO/Kitt Peak magnetograms without use of contouring routines and shows by example how these maps depend upon the spatial scale for filtering the raw data. Smaller filtering scales produce many localized closed contours in mixed polarity regions while supergranular and larger filtering scales produce more global patterns. The apparent continuity of an inversion line depends on how the spatial filtering is accomplished, but its shape depends only on scale. The total length of the magnetic polarity inversion contours varies as a power law of the filter scale with fractal dimension of order 1.9. The amplitude but nut the exponent of this power-law relation varies with solar activity. The results are compared to similar analyses of areal distributions of bipolar magnetic regions.

Jones, Harrison P.↗

Static metrology of the meter-scale deformable heliostat

This paper describes a heliostat metrology system which is developed based on deflectometry, utilizing a static perforated panel instead of conventional dynamic monitor displays to provide incident rays. The developed method is named static screen deflectometry (SSD). This robust and scalable method is especially valuable for outdoor tests of large reflectors used in concentrating solar-thermal power (CSP) systems. The developed method has been successfully demonstrated on a 2.4 𝑚 × 3.3 𝑚 float glass deformable reflector bent to focus sunlight at 113 𝑚 distance throughout a day. From images obtained from a camera at 50𝑚 distance, the reflector surface was measured to an accuracy of less than 1 𝑚𝑟𝑎𝑑 rms slope error in the full test scope.

14 SOLAR ENERGY↗

Modelling urban-scale occupant behaviour, mobility, and energy in buildings: A survey

The proliferation of urban sensing, IoT, and big data in cities provides unprecedented opportunities for a deeper understanding of occupant behaviour and energy usage patterns at the urban scale. This enables data-driven building and energy models to capture the urban dynamics, specifically the intrinsic occupant and energy use behavioural profiles that are not usually considered in traditional models. Although there are related reviews, none have investigated urban data for use in modelling occupant behaviour and energy use at multiple scales, from buildings to neighbourhood to city. This survey paper aims to fill this gap by providing a critical summary and analysis of the works reported in the literature. We present the different sources of occupant-centric urban data that are useful for data-driven modelling and categorise the range of applications and recent data-driven modelling techniques for urban behaviour and energy modelling, along with the traditional stochastic and simulation-based approaches. Finally, we present a set of recommendations for future directions in data-driven modelling of occupant behaviour and energy in buildings at the urban scale.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Transient pattern formation in an active matter contact poisoning model

Abstract One of the most notable features in repulsive particle based active matter systems is motility-induced-phase separation (MIPS) where a dense, often crystalline phase and low density fluid coexist. Most active matter studies involve time-dependent activity; however, there are many active systems where individual particles transition from living or moving to dead or nonmotile due to lack of fuel, infection, or poisoning. Here we consider an active matter particle system at densities where MIPS does not occur. When we add a small number of infected particles that can poison other particles, rendering them nonmotile, we find a rich variety of time dependent pattern formation, including MIPS, a wetting phase, and a fragmented state formed when mobile particles plow through a nonmotile packing. We map the patterns as a function of time scaled by epidemic duration, and show that the pattern formation is robust for a wide range of poisoning rates and activity levels. We also show that pattern formation does not occur in a random death model, but requires the promotion of nucleation by contact poisoning. Our results should be relevant to biological and active matter systems where there is some form of poisoning, death, or transition to nonmotility.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

The CACAO Method for Smoothing, Gap Filling, and Characterizing Seasonal Anomalies in Satellite Time Series

Consistent, continuous, and long time series of global biophysical variables derived from satellite data are required for global change research. A novel climatology fitting approach called CACAO (Consistent Adjustment of the Climatology to Actual Observations) is proposed to reduce noise and fill gaps in time series by scaling and shifting the seasonal climatological patterns to the actual observations. The shift and scale CACAO parameters adjusted for each season allow quantifying shifts in the timing of seasonal phenology and inter-annual variations in magnitude as compared to the average climatology. CACAO was assessed first over simulated daily Leaf Area Index (LAI) time series with varying fractions of missing data and noise. Then, performances were analyzed over actual satellite LAI products derived from AVHRR Long-Term Data Record for the 1981-2000 period over the BELMANIP2 globally representative sample of sites. Comparison with two widely used temporal filtering methods-the asymmetric Gaussian (AG) model and the Savitzky-Golay (SG) filter as implemented in TIMESAT-revealed that CACAO achieved better performances for smoothing AVHRR time series characterized by high level of noise and frequent missing observations. The resulting smoothed time series captures well the vegetation dynamics and shows no gaps as compared to the 50-60% of still missing data after AG or SG reconstructions. Results of simulation experiments as well as confrontation with actual AVHRR time series indicate that the proposed CACAO method is more robust to noise and missing data than AG and SG methods for phenology extraction.

LAI↗

Electrospray Thruster Performance with Microfabricated Emitter Arrays and Indium Propellant

The feasibility of a microfabricated indium-fueled electrospray thruster with excellent performance was demonstrated. High efficiency electrospray thrusters with microfabricated components are under development for very compact, distributable propulsion systems that can be employed on both very small and large spacecraft with 10X improvement over SOA in mass, volume and specific impulse The critical components of this technology are the microfabricated emitter arrays and the capillary force driven indium feed system. Grey scale electron-beam lithography patterning and reactive ion dry etching provided the required micron-scale etch precision and uniformity across an array of 400 emitters in 1 cm2. Initial tests of single microfabricated silicon emitters demonstrated better performance than industry standard single emitters and the performance required to achieve 200 micronewtons when scaled up to a thruster with 400 emitters in 1 cm2. Arrays of emitters tested in a preliminary prototype Microfluidic Electrospray Propulsion (MEP) thruster assembly demonstrated stable performance at estimated thrust levels of 5, 50, and 120 µN at extraction voltages less than 4 kV. Current stability was within 0.15 % at 120 µN with only 1.5% of the emitter current collected by the extractor electrode. Post-test inspections revealed that more than 99% of the 400 emitters were electrospraying during the test. Specific impulse was estimated to be >3100 s from measurements of total charge and consumed indium mass at an emitter voltage of 1470 V. The results of this investigation suggest that microfabricated indium electrospray thruster technology is both feasible and capable of excellent performance as a highly compact microthruster.

Marrese-Reading, Colleen M.↗

Establishing connectivity patterns of eastern oysters ( Crassostrea virginica ) on regional oceanographic scales

Localized depletion of marine and estuarine populations often results from large-scale natural and anthropogenic disturbances (e.g., hurricanes, oil spills) as well as overharvest of fisheries resources. Understanding how such localized depletions may affect populations at larger regional scales requires knowledge of connectivity among local populations within the larger regional landscape or metapopulation. Efforts to restore populations following such decreases require similar knowledge. During the 2010 Deepwater Horizon oil spill, dramatic declines of oysters occurred throughout estuaries west and east of the Mississippi River. We examined trajectories of particles, which were parameterized to mimic oyster larvae, using the ADvanced CIRCulation (ADCIRC; https://adcirc.org ) model to evaluate potential connectivity within and among embayments from Western Louisiana to Alabama. Patterns of larval settlement, which we defined as the intersection of a larval particle with known or expected oyster habitat at any point 13–21 days post-release, reflected much greater local contributions, with 50%–90% of settled particles originating within the same subdivision of embayments. Exchange among subdivision was much less (0%–40%) and settlement originating from outside the embayment of release was trivial under most scenarios (0%–14%). Connectivity between adjacent basins was greatest for larvae released in the southern portions of the embayment, whereas connectivity among nonadjacent basins was not predicted under the scenarios modeled. Because most local populations are relatively isolated on ecological timescales, areas suffering from extensive local depletion are likely to require extensive time to recover due to the lack of larval subsidy from the overall regional population. Restoration would require building stepping-stone populations or reefs within and among basin to restore a high degree of connectivity.

59 BASIC BIOLOGICAL SCIENCES↗

Regional biogeography versus intra-annual dynamics of the root and soil microbiome

Abstract Background Root and soil microbial communities constitute the below-ground plant microbiome, are drivers of nutrient cycling, and affect plant productivity. However, our understanding of their spatiotemporal patterns is confounded by exogenous factors that covary spatially, such as changes in host plant species, climate, and edaphic factors. These spatiotemporal patterns likely differ across microbiome domains (bacteria and fungi) and niches (root vs. soil). Results To capture spatial patterns at a regional scale, we sampled the below-ground microbiome of switchgrass monocultures of five sites spanning > 3 degrees of latitude within the Great Lakes region. To capture temporal patterns, we sampled the below-ground microbiome across the growing season within a single site. We compared the strength of spatiotemporal factors to nitrogen addition determining the major drivers in our perennial cropping system. All microbial communities were most strongly structured by sampling site, though collection date also had strong effects; in contrast, nitrogen addition had little to no effect on communities. Though all microbial communities were found to have significant spatiotemporal patterns, sampling site and collection date better explained bacterial than fungal community structure, which appeared more defined by stochastic processes. Root communities, especially bacterial, were more temporally structured than soil communities which were more spatially structured, both across and within sampling sites. Finally, we characterized a core set of taxa in the switchgrass microbiome that persists across space and time. These core taxa represented < 6% of total species richness but > 27% of relative abundance, with potential nitrogen fixing bacteria and fungal mutualists dominating the root community and saprotrophs dominating the soil community. Conclusions Our results highlight the dynamic variability of plant microbiome composition and assembly across space and time, even within a single variety of a plant species. Root and soil fungal community compositions appeared spatiotemporally paired, while root and soil bacterial communities showed a temporal lag in compositional similarity suggesting active recruitment of soil bacteria into the root niche throughout the growing season. A better understanding of the drivers of these differential responses to space and time may improve our ability to predict microbial community structure and function under novel conditions.

59 BASIC BIOLOGICAL SCIENCES↗

Defining upstream enhancing and inhibiting sequence patterns for plant peroxisome targeting signal type 1 using large–scale in silico and in vivo analyses

Peroxisomes are universal eukaryotic organelles essential to plants and animals. Most peroxisomal matrix proteins carry peroxisome targeting signal type 1 (PTS1), a C-terminal tripeptide. Studies from various kingdoms have revealed influences from sequence upstream of the tripeptide on peroxisome targeting, supporting the view that positive charges in the upstream region are the major enhancing elements. However, a systematic approach to better define the upstream elements influencing PTS1 targeting capability is needed. Here, we used protein sequences from 177 plant genomes to perform large-scale and in-depth analysis of the PTS1 domain, which includes the PTS1 tripeptide and upstream sequence elements. We identified and verified 12 low-frequency PTS1 tripeptides and revealed upstream enhancing and inhibiting sequence patterns for peroxisome targeting, which were subsequently validated in vivo. Follow-up analysis revealed that nonpolar and acidic residues have relatively strong enhancing and inhibiting effects, respectively, on peroxisome targeting. However, in contrast to the previous understanding, positive charges alone do not show the anticipated enhancing effect and that both the position and property of the residues within these patterns are important for peroxisome targeting. We further demonstrated that the three residues immediately upstream of the tripeptide are the core influencers, with a ‘basic-nonpolar-basic’ pattern serving as a strong and universal enhancing pattern for peroxisome targeting. These findings have significantly advanced our knowledge of the PTS1 domain in plants and likely other eukaryotic species as well. The principles and strategies employed in the present study may also be applied to deciphering auxiliary targeting signals for other organelles.

59 BASIC BIOLOGICAL SCIENCES↗

Terrestrial ionospheric signatures of field-aligned currents

The occurrence of traveling field-aligned current filaments and twin-vortex patterns is suggested to be related to sudden changes in solar wind dynamic pressure and/or the IMF. Greenland magnetometer observations of the cleft region magnetic perturbations associated with small-scale twin-vortex patterns show that these events occur on both sides of the magnetic local noon, contradicting Glassmeier at al.'s (1989) statistical analysis of 82 twin-vortex subauroral-latitude events obtained by the Scandinavian Magnetometer Array; the stations are closer to the ionospheric projection of the cleft earlier in magnetic local time, relative to the across-the-cleft-located Greenland stations.

Friis-Christensen, E.↗

LiDAR-Derived Surface Roughness Signatures of Basaltic Lava Types at the Muliwai a Pele Lava Channel, Mauna Ulu, Hawai'i

We used light detection and ranging (LiDAR) data to calculate roughness patterns (homogeneity, mean-roughness, and entropy) for five lava types at two different resolutions (1.5 and 0.1 m/pixel). We found that end-member types (a a and pahoehoe) are separable (with 95% confidence) at both scales, indicating that roughness patterns are well suited for analyzing types of lava. Intermediate lavas were also explored, and we found that slabby-pahoehoe is separable from the other end-members using 1.5 m/pixel data, but not in the 0.1 m/pixel analysis. This suggests that the conversion from pahoehoe to slabby-pahoehoe is a meter-scale process, and the finer roughness characteristics of pahoehoe, such as ropes and toes, are not significantly affected. Furthermore, we introduce the ratio ENT/HOM (derived from lava roughness) as a proxy for assessing local lava flow rate from topographic data. High entropy and low homogeneity regions correlate with high flow rate while low entropy and high homogeneity regions correlate with low flow rate.We suggest that this relationship is not directional, rather it is apparent through roughness differences of the associated lava type emplaced at the high and low rates, respectively.

Whelley, Patrick L.↗

Using High Spatial Resolution Satellite Imagery to Map Forest Burn Severity Across Spatial Scales in a Pine Barrens Ecosystem

As a primary disturbance agent, fire significantly influences local processes and services of forest ecosystems. Although a variety of remote sensing based approaches have been developed and applied to Landsat mission imagery to infer burn severity at 30 m spatial resolution, forest burn severity have still been seldom assessed at fine spatial scales (less than or equal to 5 m) from very-high-resolution (VHR) data. We assessed a 432 ha forest fire that occurred in April 2012 on Long Island, New York, within the Pine Barrens region, a unique but imperiled fire-dependent ecosystem in the northeastern United States. The mapping of forest burn severity was explored here at fine spatial scales, for the first time using remotely sensed spectral indices and a set of Multiple Endmember Spectral Mixture Analysis (MESMA) fraction images from bi-temporal - pre- and post-fire event - WorldView-2 (WV-2) imagery at 2 m spatial resolution. We first evaluated our approach using 1 m by 1 m validation points at the sub-crown scale per severity class (i.e. unburned, low, moderate, and high severity) from the post-fire 0.10 m color aerial ortho-photos; then, we validated the burn severity mapping of geo-referenced dominant tree crowns (crown scale) and 15 m by 15 m fixed-area plots (inter-crown scale) with the post-fire 0.10 m aerial ortho-photos and measured crown information of twenty forest inventory plots. Our approach can accurately assess forest burn severity at the sub-crown (overall accuracy is 84% with a Kappa value of 0.77), crown (overall accuracy is 82% with a Kappa value of 0.76), and inter-crown scales (89% of the variation in estimated burn severity ratings (i.e. Geo-Composite Burn Index (CBI)). This work highlights that forest burn severity mapping from VHR data can capture heterogeneous fire patterns at fine spatial scales over the large spatial extents. This is important since most ecological processes associated with fire effects vary at the less than 30 m scale and VHR approaches could significantly advance our ability to characterize fire effects on forest ecosystems.

Meng, Ran↗

Spatial distribution of large-scale solar magnetic fields and their relation to the interplanetary magnetic field

The spatial organization of the observed photospheric magnetic field as well as its relation to the polarity of the IMF have been studied using high resolution magnetograms from the Kitt Peak National Observatory. Systematic patterns in the large scale field are due to contributions from both concentrated flux and more diffuse flux. The polarity of the photospheric field, determined on various spatial scales, correlates with the polarity of the IMF. Analyses based on several spatial scales in the photosphere suggest that new flux in the interplanetary medium is often due to relatively small photospheric features which appear in the photosphere up to one month before they are manifest at the earth.

Levine, R. H.↗

Clustering of DESI galaxies split by thermal Sunyaev-Zeldovich effect

The thermal Sunyaev-Zeldovich (tSZ) effect is associated with galaxy clusters - extremely large and dense structures tracing the dark matter with a higher bias than isolated galaxies. We propose to use the tSZ data to separate galaxies from redshift surveys into distinct subpopulations corresponding to different densities and biases independently of the redshift survey systematics. Leveraging the information from different environments, as in density-split and density-marked clustering, is known to tighten the constraints on cosmological parameters, like $\Omega_m$, $\sigma_8$ and neutrino mass. We use data from the Dark Energy Spectroscopic Instrument (DESI) and the Atacama Cosmology Telescope (ACT) in their region of overlap to demonstrate informative tSZ splitting of Luminous Red Galaxies (LRGs). We discover a significant increase in the large-scale clustering of DESI LRGs corresponding to detections starting from 1-2 sigma in the ACT DR6 + Planck tSZ Compton-$y$ map, below the cluster candidate threshold (4 sigma). We also find that such galaxies have higher line-of-sight coordinate (and velocity) dispersions and a higher number of close neighbors than both the full sample and near-zero tSZ regions. We produce simple simulations of tSZ maps that are intrinsically consistent with galaxy catalogs and do not include systematic effects, and find a similar pattern of large-scale clustering enhancement with tSZ effect significance. Moreover, we observe that this relative bias pattern remains largely unchanged with variations in the galaxy-halo connection model in our simulations. This is promising for future cosmological inference from tSZ-split clustering with semi-analytical models. Thus, we demonstrate that valuable cosmological information is present in the lower signal-to-noise regions of the thermal Sunyaev-Zeldovich map, extending far beyond the individual cluster candidates.

Astronomy data analysis↗

Coarsening following a morphological instability in the one-sided model

We study the coarsening of the interfacial pattern separating two coexisting phases after the pattern becomes morphologically unstable. Shortly after the instability, the scale of the structure is given by the most unstable wave number in the linear regime. At later times, nonlinear interactions cause the structure to coarsen. Coarsening is studied by monitoring the time dependence of the two-dimensional power spectrum of the pattern, especially for wave vectors transverse to the direction of growth. Characteristic length scales of the pattern obtained from moments of the power spectrum are asymptotically linear in time. Furthermore, the power spectrum is seen to satisfy a scaling relation, in agreement with previous studies. A normal-velocity autocorrelation function is calculated and found to decay substantially over length scales that are of the order of the scale of the pattern. The issue of spatial anisotropy in the correlation functions is also discussed.

Vinals, Jorge↗