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At least 433 records · Page 24
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

The Most Distant H i Galaxies Discovered by the 500 m Dish FAST

Abstract Neutral hydrogen (Hi) is the primary component of the cool interstellar medium (ISM) and is the reservoir of fuel for star formation. Owing to the sensitivity of existing radio telescopes, our understanding of the evolution of the ISM in galaxies remains limited, as it is based on only a few hundred galaxies detected in Hibeyond the local Universe. With the high sensitivity of the Five-hundred-meter Aperture Spherical radio Telescope (FAST), we carried out a blind Hisearch, the FAST Ultra-Deep Survey, which extends to redshifts up to 0.42 and a sensitivity of 50μJy beam −1 . Here, we report the first discovery of six galaxies in Hi atz> 0.38. For these galaxies, the FAST angular resolution of ∼4′ corresponds to a mean linear size of ∼ 1.3 h 70 − 1 Mpc. These galaxies are among the most distant Hiemission detections known, with one having the most massive Hicontent ( 10 10.93 ± 0.04 h 70 − 2 M ⊙ ). Using recent data from the DESI survey and new observations with the Hale, Big Telescope Alt-azimuth, and Keck telescopes, optical counterparts are detected for all galaxies within the 3σpositional uncertainty ( 0.5 h 70 − 1 Mpc) and 200 km s −1 in recession velocity. Assuming that the dominant source of Hiis the identified optical counterpart, we find evidence of evolution in the Hicontent of galaxies over the last 4.2 Gyr. Our new high-redshift Higalaxy sample provides the opportunity to better investigate the evolution of cool gas in galaxies. A larger sample size in the future will allow us to refine our knowledge of the formation and evolution of galaxies.

Astronomy & Astrophysics↗
DOE OSTI2024

Uncertainty Propagation within Chained Models for Machine Learning Reconstruction of Neutrino-LAr Interactions

Sequential or chained models are increasingly prevalent in machine learning for scientific applications, due to their flexibility and ease of development. Chained models are particularly useful when a task is separable into distinct steps with a hierarchy of meaningful intermediate representations. In reliability-critical tasks, it is important to quantify the confidence of model inferences. However, chained models pose an additional challenge for uncertainty quantification, especially when input uncertainties need to be propagated. In such cases, a fully uncertainty-aware chain of models is required, where each step accepts a probability distribution over the input space, and produces a probability distribution over the output space. In this work, we present a case study for adapting a single model within an existing chain, designed for reconstruction within neutrino-Argon interactions, developed for neutrino oscillation experiments such as MicroBooNE, ICARUS, and the future DUNE experiment. We test the performance of an input uncertainty-enabled model against an uncertainty-blinded model using a method for generating synthetic noise. By comparing these two, we assess the increase in inference quality achieved by exposing models to upstream uncertainty estimates.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2025

Search for low-mass electron-recoil dark matter using a single-charge sensitive SuperCDMS-HVeV Detector

We present constraints on low mass dark matter-electron scattering and absorption interactions using a SuperCDMS high-voltage eV-resolution (HVeV) detector. Data were taken underground in the NEXUS facility located at Fermilab with an overburden of 225 meters of water equivalent. The experiment benefits from the minimizing of luminescence from the printed circuit boards in the detector holder used in all previous HVeV studies. A blind analysis of $6.1\,\mathrm{g\cdot days}$ of exposure produces exclusion limits for dark matter-electron scattering cross-sections for masses as low as $1\,\mathrm{MeV}/c^2$, as well as on the photon-dark photon mixing parameter and the coupling constant between axion-like particles and electrons for particles with masses $>1.2\,\mathrm{eV}/c^2$ probed via absorption processes.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2022

Evaluating seasonal and regional distribution of snowfall in regional climate model simulations in the Arctic

In this study, we investigate how the regional climate model HIRHAM5 reproduces the spatial and temporal distribution of Arctic snowfall when compared to CloudSat satellite observations during the examined period of 2007–2010. For this purpose, both approaches, i.e., the assessments of the surface snowfall rate (observation-to-model) and the radar reflectivity factor profiles (model-to-observation), are carried out considering spatial and temporal sampling differences. The HIRHAM5 model, which is constrained in its synoptic representation by nudging to ERA-Interim, represents the snowfall in the Arctic region well in comparison to CloudSat products. The spatial distribution of the snowfall patterns is similar in both identifying the southeastern coast of Greenland and the North Atlantic corridor as regions gaining more than twice as much snowfall as the Arctic average, defined here for latitudes between 66 and 81°N. Excellent agreement (difference less than 1%) in the Arctic-averaged annual snowfall rate between HIRHAM5 and CloudSat is found, whereas ERA-Interim reanalysis shows an underestimation of 45% and significant deficits in the representation of the snowfall rate distribution. From the spatial analysis, it can be seen that the largest differences in the mean annual snowfall rates are an overestimation near the coastlines of Greenland and other regions with large orographic variations as well as an underestimation in the northern North Atlantic Ocean. To a large extent, the differences can be explained by clutter contamination, blind zone or higher resolution of CloudSat measurements, but clearly HIRHAM5 overestimates the orographic-driven precipitation. The underestimation of HIRHAM5 within the North Atlantic corridor south of Svalbard is likely connected to a poor description of the marine cold air outbreaks which could be identified by separating snowfall into different circulation weather type regimes. By simulating the radar reflectivity factor profiles from HIRHAM5 utilizing the Passive and Active Microwave TRAnsfer (PAMTRA) forward-modeling operator, the contribution of individual hydrometeor types can be assessed. Looking at a latitude band at 72–73°N, snow can be identified as the hydrometeor type dominating radar reflectivity factor values across all seasons. The largest differences between the observed and simulated reflectivity factor values are related to the contribution of cloud ice particles, which is underestimated in the model, most likely due to the small sizes of the particles. The model-to-observation approach offers a promising diagnostic when improving cloud schemes, as illustrated by comparison of different schemes available for HIRHAM5.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Measurement report: The Fifth International Workshop on Ice Nucleation phase 1 (FIN-01): intercomparison of single-particle mass spectrometers

Knowledge of the chemical composition and mixing state of aerosols at a single-particle level is critical for gaining insights into atmospheric processes. One common tool to make these measurements is single-particle mass spectrometry. There remains a need to compare the performance of different single-particle mass spectrometers (SPMSs). An intercomparison of SPMSs was conducted at the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) chamber at the Karlsruhe Institute of Technology (KIT) in November 2014, as part of the first phase of the Fifth International Workshop on Ice Nucleation (FIN-01). In this paper we compare size distributions and mass spectra of atmospherically relevant particle types measured by five SPMSs. These include different minerals, desert and soil dusts, soot, bioaerosol (Snomax; protein granule), secondary organic aerosol (SOA), and SOA-coated mineral particles. Most SPMSs reported similar vacuum aerodynamic diameter (d va ) within typical instrumental ranges from ~100–200 nm (lower limit) to ~2–3 µm (upper limit). In general, all SPMSs exhibited a wide dynamic range (up to ~10 3 ) and high signal-to-noise ratio (up to ~10 4 ) in mass spectra. Common spectral features with small diversities in mass spectra were found with high average Pearson's correlation coefficients, i.e., for average positive spectra r avg-pos =0.74 ± 0.12 and average negative spectra r avg-neg =0.67 ± 0.22. We found that instrument-specific detection efficiency (DE) was more dependent on particle size than particle type, and particle identification favored the use of bipolar, rather than monopolar, instruments. Particle classification from “blind experiments” showed that all instruments differentiated SOA, soot, and soil dust and detected subtle changes in the particle internal mixing but had difficulties differentiating among specific mineral types and dusts. This study helps to further understand the capabilities and limitations of the single-particle mass spectrometry technique in general and the specific performance of the instrument in characterizing atmospheric aerosol particles.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Results from a multi-laboratory ocean metaproteomic intercomparison: effects of LC-MS acquisition and data analysis procedures

Metaproteomics is an increasingly popular methodology that provides information regarding the metabolic functions of specific microbial taxa and has potential for contributing to ocean ecology and biogeochemical studies. A blinded multi-laboratory intercomparison was conducted to assess comparability and reproducibility of taxonomic and functional results and their sensitivity to methodological variables. Euphotic zone samples from the Bermuda Atlantic Time-series Study (BATS) in the North Atlantic Ocean collected by in situ pumps and the autonomous underwater vehicle (AUV) Clio were distributed with a paired metagenome, and one-dimensional (1D) liquid chromatographic data-dependent acquisition mass spectrometry analysis was stipulated. Analysis of mass spectra from seven laboratories through a common bioinformatic pipeline identified a shared set of 1056 proteins from 1395 shared peptide constituents. Quantitative analyses showed good reproducibility: pairwise regressions of spectral counts between laboratories yielded R 2 values averaged 0.62±0.11, and a Sørensen similarity analysis of the top 1000 proteins revealed 70 %–80 % similarity between laboratory groups. Taxonomic and functional assignments showed good coherence between technical replicates and different laboratories. A bioinformatic intercomparison study, involving 10 laboratories using eight software packages, successfully identified thousands of peptides within the complex metaproteomic datasets, demonstrating the utility of these software tools for ocean metaproteomic research. Lessons learned and potential improvements in methods were described. Future efforts could examine reproducibility in deeper metaproteomes, examine accuracy in targeted absolute quantitation analyses, and develop standards for data output formats to improve data interoperability. Together, these results demonstrate the reproducibility of metaproteomic analyses and their suitability for microbial oceanography research, including integration into global-scale ocean surveys and ocean biogeochemical models.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Assessing Arctic low-level clouds and precipitation from above – a radar perspective

Most Arctic clouds occur below 2 km altitude as revealed by CloudSat satellite observations. However, recent studies suggest that the relatively coarse spatial resolution, low sensitivity, and blind zone of the radar installed on CloudSat may not enable it to comprehensively document low-level clouds. We investigate the impact of these limitations on the Arctic low- level cloud fraction, which is the amount of cloudy points with respect to all points as a function of height, derived from CloudSat radar observations. For this purpose, we leverage highly resolved vertical profiles of low-level cloud fraction derived from downlooking Microwave Radar/radiometer for Arctic Clouds (MiRAC) radar reflectivity measurements. MiRAC has been operated during four aircraft campaigns taking place in the vicinity of Svalbard during different times of the year and covering more than 25,000 km. This allows us to study the dependence of CloudSat limitations on different synoptic and surface conditions.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

The AWAKEN wind farm benchmark, Part 2: Modeling results

Accurately modeling wind farm performance in complex atmospheric flows remains a challenge. This paper presents the modeling results of the American WAKE experimeNt (AWAKEN) wind farm benchmark, a collaborative effort involving 16 research groups from academia and industry within the International Energy Agency Wind Technology Collaboration Programme Task 57. The study evaluates a diverse suite of simulation tools, ranging from fast-running engineering wake models to high-fidelity large-eddy simulations, against a diurnal case study observed during the AWAKEN campaign. The benchmark utilized a three-phase structure to progressively assess model performance as observational data availability increased. Initial blind predictions showed that higher-fidelity models did not uniformly outperform simpler simulation tools. A distinct spatial bias was observed where models struggled to resolve the interplay between a low-level jet, wakes, and terrain-induced flow acceleration. In subsequent phases, leveraging additional measurements for model improvement led to a reduction in mean absolute error across the model ensemble; however, this effect was most pronounced in engineering wake models, where targeted calibration reduced error by up to 40~\%. Overall, the study demonstrates that inflow characterization remains a primary prerequisite for accuracy, particularly for models relying on coarse forcing datasets. While the limited ability to resolve local terrain-flow interactions under single-day conditions represent a recognized constraint, the overall findings on wake modeling and real-world validation still provide valuable guidance for model application and for mitigating this limitation.

Bodini, Nicola↗
DOE OSTI2020

Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones

Diffusible small molecule microbial hormones drastically alter the expression profiles of antibiotics and other drugs in actinobacteria. For example, avenolide (a butenolide) regulates the production of avermectin, derivatives of which are used in the treatment of river blindness and other parasitic diseases. Butenolides and γ-butyrolactones control the production of pharmaceutically important secondary metabolites by binding to TetR family transcriptional repressors. Here, we describe a concise, 22-step synthetic strategy for the production of avenolide. We present crystal structures of the butenolide receptor AvaR1 in isolation and in complex with avenolide, as well as those of AvaR1 bound to an oligonucleotide derived from its operator. Biochemical studies guided by the co-crystal structures enable the identification of 90 new actinobacteria that may be regulated by butenolides, two of which are experimentally verified. These studies provide a foundation for understanding the regulation of microbial secondary metabolite production, which may be exploited for the discovery and production of novel medicines.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices

Single-molecule FRET (smFRET) has become a mainstream technique for studying biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by an ever-increasing number of groups has generated significant progress in sample preparation, measurement procedures, data analysis, algorithms and documentation. Several labs that employ smFRET approaches have joined forces to inform the smFRET community about streamlining how to perform experiments and analyze results for obtaining quantitative information on biomolecular structure and dynamics. The recent efforts include blind tests to assess the accuracy and the precision of smFRET experiments among different labs using various procedures. These multi-lab studies have led to the development of smFRET procedures and documentation, which are important when submitting entries into the archiving system for integrative structure models, PDB-Dev. This position paper describes the current ‘state of the art’ from different perspectives, points to unresolved methodological issues for quantitative structural studies, provides a set of ‘soft recommendations’ about which an emerging consensus exists, and lists openly available resources for newcomers and seasoned practitioners. To make further progress, we strongly encourage ‘open science’ practices.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Partial connectomes of labeled dopaminergic circuits reveal non-synaptic communication and axonal remodeling after exposure to cocaine

Dopaminergic (DA) neurons exert profound influences on behavior including addiction. However, how DA axons communicate with target neurons and how those communications change with drug exposure remains poorly understood. We leverage cell type-specific labeling with large volume serial electron microscopy to detail DA connections in the nucleus accumbens (NAc) of the mouse (Mus musculus) before and after exposure to cocaine. We find that individual DA axons contain different varicosity types based on their vesicle contents. Spatially ordering along individual axons further suggests that varicosity types are non-randomly organized. DA axon varicosities rarely make specific synapses (<2%, 6/410), but instead are more likely to form spinule-like structures (15%, 61/410) with neighboring neurons. Days after a brief exposure to cocaine, DA axons were extensively branched relative to controls, formed blind-ended ‘bulbs’ filled with mitochondria, and were surrounded by elaborated glia. Finally, mitochondrial lengths increased by ~2.2 times relative to control only in DA axons and NAc spiny dendrites after cocaine exposure. We conclude that DA axonal transmission is unlikely to be mediated via classical synapses in the NAc and that the major locus of anatomical plasticity of DA circuits after exposure to cocaine are large-scale axonal re-arrangements with correlated changes in mitochondria.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

System and method for automated extraction of high resolution structural dynamics from video

A method for extracting vibrational modes of a structure includes: receiving a plurality of video frames, each of the video frames including a plurality of pixels; decomposing each of the video frames on a plurality of spatial scales in accordance with complex steerable pyramid filters to obtain a filter response for each of the spatial scales; computing a plurality of local phases of the pixels of each frame; removing a temporal mean from each frame to obtain a plurality of factored vibration motion functions; performing principal component analysis on the factored vibration motion functions to obtain principal components; blind source separating the principal components to compute a plurality of modal coordinates; computing frequency and damping ratios in accordance with the modal coordinates; and outputting the computed frequency and damping ratios.

42 ENGINEERING↗
DOE OSTI2020

ROOT I/O compression improvements for HEP analysis

We overview recent changes in the ROOT I/O system, increasing performance and enhancing it and improving its interaction with other data analysis ecosystems. Both the newly introduced compression algorithms, the much faster bulk I/O data path, and a few additional techniques have the potential to significantly to improve experiment's software performance. The need for efficient lossless data compression has grown significantly as the amount of HEP data collected, transmitted, and stored has dramatically increased during the LHC era. While compression reduces storage space and, potentially, I/O bandwidth usage, it should not be applied blindly: there are significant trade-offs between the increased CPU cost for reading and writing files and the reduce storage space.

Shadura, Oksana↗
DOE OSTI2020

Source identification by non-negative matrix factorization combined with semi-supervised clustering

Machine-learning methods and apparatus are provided to solve blind source separation problems with an unknown number of sources and having a signal propagation model with features such as wave-like propagation, medium-dependent velocity, attenuation, diffusion, and/or advection, between sources and sensors. In exemplary embodiments, multiple trials of non-negative matrix factorization are performed for a fixed number of sources, with selection criteria applied to determine successful trials. A semi-supervised clustering procedure is applied to trial results, and the clustering results are evaluated for robustness using measures for reconstruction quality and cluster separation. The number of sources is determined by comparing these measures for different trial numbers of sources. Source locations and parameters of the signal propagation model can also be determined. Disclosed methods are applicable to a wide range of spatial problems including chemical dispersal, pressure transients, and electromagnetic signals, and also to non-spatial problems such as cancer mutation.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Study on Foam Fracturing of Granite for the Development of Enhanced Geothermal Systems

Foam fracturing has been considered as a potential technical approach to address water concerns with hydraulic stimulation in the development of enhanced geothermal systems (EGS). This paper reports the recent progress of a project sponsored by the U.S. DOE GTO Waterless Stimulation Initiative. The project investigates the foam fracturing as an alternative approach to the hydraulic fracturing. The paper describes the development of foam fracturing testing system at Oak Ridge National Laboratory (ORNL). The system can be used to perform the hydraulic fracturing of rock-like materials with both water and foamed fluids under pressure to 6,000 psi (41.4 MPa). The system features the sections of foam generation and foam injection and has the capability of testing materials in both monotonic and cyclic injection modes.Experimental results of foam fracturing on Charcoal Black granite will be reported. Cylindrical granite specimens with a blind hole were studied along with water and nitrogen-gas-in-water foam as the fracturing fluids. The effects of fracturing fluids and injection modes on the breakdown pressure and failure responses of the material were examined. The observations from the experimental work and the implications to the EGS application will be presented and discussed.

Wang, Hong↗
DOE OSTI2021

Fast Faraday cup for measuring the longitudinal distribution of particle charge density in non-relativistic beams

A Fast Faraday cup includes a group of electrodes including a ground electrode having a through hole and a collector electrode configured with a blind hole that functions a collector hole. The electrodes are configured to allow a beam (e.g., a non-relativistic beam) to fall onto the ground electrode so that the through hole cuts a beamlet that flies into the collector hole and facilitates measurement of the longitudinal distribution of particle charge density in the beam. The diameters, depths, spacing and alignment of the collector hole and the through hole are controllable to enable the Fast Faraday day cup to operate with a fast response time (e.g., fine time resolution) and capture secondary particles.

Sun, Ding↗
DOE OSTI2021

B- and D-meson semileptonic decays with highly improved staggered quarks

We present results for $B_{(s)}$- and $D_{(s)}$-meson semileptonic decays from ongoing calculations by the Fermilab Lattice and MILC Collaborations. Our calculation employs the highly improved staggered quark (HISQ) action for both sea and valence quarks and includes several ensembles with physical-mass up, down, strange, and charm quarks and lattice spacings ranging from $a\approx0.15$ fm down to 0.06 fm. At most lattice spacings, an ensemble with physical-mass light quarks is included. The use of the highly improved action, combined with the MILC Collaboration's gauge ensembles with lattice spacings down to $a\approx0.042$ fm, allows heavy valence quarks to be treated with the same discretization as the light and strange quarks. This unified treatment of the valence quarks allows (in some cases) for absolutely normalized currents, bypassing the need for perturbative matching, which has been a leading source of uncertainty in previous calculations of $B$-meson decay form factors by our collaboration. All preliminary form-factor results are blinded.

Jay, William I.↗
DOE OSTI2021

Hadronic vacuum polarization of the muon on 2+1+1-flavor HISQ ensembles: an update

We give an update on the status of the Fermilab Lattice-HPQCD-MILC calculation of the contribution to the muon's anomolous magnetic moment from the light-quark, connected hadronic vacuum polarization. We present preliminary, blinded results in the intermediate window for this contribution, $a_{\mu, \textrm{W}}^{ll}$. The calculation is performed on $N_f =2+1+1$ highly-improved staggered quark (HISQ) ensembles from the MILC collaboration with physical pion mass at four lattice spacings between 0.15 fm and 0.06 fm. We also present preliminary results for a study of the two-pion contributions to the vector-current correlation function performed on the 0.15 fm ensemble where we see a factor of four improvement over traditional noise reduction techniques.

Lahert, Shaun↗