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At least 433 records · Page 24

Snapshot multifocal light field microscopy

Light field microscopy (LFM) is an emerging technology for high-speed wide-field 3D imaging by capturing 4D light field of 3D volumes. However, its 3D imaging capability comes at a cost of lateral resolution. In addition, the lateral resolution is not uniform across depth in the light field dconvolution reconstructions. To address these problems, here, we propose a snapshot multifocal light field microscopy (MFLFM) imaging method. The underlying concept of the MFLFM is to collect multiple focal shifted light fields simultaneously. We show that by focal stacking those focal shifted light fields, the depth-of-field (DOF) of the LFM can be further improved but without sacrificing the lateral resolution. Also, if all differently focused light fields are utilized together in the deconvolution, the MFLFM could achieve a high and uniform lateral resolution within a larger DOF. We present a house-built MFLFM system by placing a diffractive optical element at the Fourier plane of a conventional LFM. The optical performance of the MFLFM are analyzed and given. Both simulations and proof-of-principle experimental results are provided to demonstrate the effectiveness and benefits of the MFLFM. We believe that the proposed snapshot MFLFM has potential to enable high-speed and high resolution 3D imaging applications.

He, Kuan↗

Deep learning enhanced super-resolution x-ray fluorescence microscopy by a dual-branch network

X-ray fluorescence (XRF) microscopy is a powerful technique for quantifying the distribution of elements in complex materials, which makes it a crucial imaging technique across a wide range of disciplines in physical and biological sciences, including chemistry, materials science, microbiology, and geosciences. However, as a scanning microscopy technique, the spatial resolution of XRF imaging is inherently constrained by the x-ray probe profile and scanning step size. Here we propose a dual-branch machine learning (ML) model, which can extract scale-variant features and bypass abundant low-frequency information separately, to enhance the spatial resolution of the XRF images by mitigating the effects of blurring from the probe profile. The model is trained by simulated natural images, and a two-stage training strategy is used to overcome the domain gap between the natural images and experimental data. The tomography reconstruction from enhanced XRF projections shows an improvement in resolution by a scale factor of four and reveals distinct internal features invisible in low-resolution XRF within a battery sample. This study offers a promising approach for obtaining high-resolution XRF imaging from its low-resolution version, paving the way for future investigations in a broader range of disciplines and materials.

36 MATERIALS SCIENCE↗

Electrochemically modulated single-molecule localization microscopy for in vitro imaging cytoskeletal protein structures

A new concept of electrochemically modulated single-molecule localization super-resolution imaging is developed. Applications of single-molecule localization super-resolution microscopy have been limited due to insufficient availability of qualified fluorophores with favorable low duty cycles. The key for the new concept is that the “On” state of a redox-active fluorophore with unfavorable high duty cycle could be driven to “Off” state by electrochemical potential modulation and thus become available for single-molecule localization imaging. The new concept was carried out using redox-active cresyl violet with unfavorable high duty cycle as a model fluorophore by synchronizing electrochemical potential scanning with a single-molecule localization microscope. The two cytoskeletal protein structures, the microtubules from porcine brain and the actins from rabbit muscle, were selected as the model target structures for the conceptual imaging in vitro. The super-resolution images of microtubules and actins were obtained from precise single-molecule localizations determined by modulating the On/Off states of single fluorophore molecules on the cytoskeletal proteins via electrochemical potential scanning. Importantly, this method could allow more fluorophores even with unfavorable photophysical properties to become available for a wider and more extensive application of single-molecule localization microscopy.

electrochemical modulation↗

Non-perturbative cathodoluminescence microscopy of beam-sensitive materials

Cathodoluminescence microscopy is now a wellestablished and powerful tool for probing the photonic properties of nanoscale materials, but in many cases, nanophotonic materials are easily damaged by the electronbeam doses necessary to achieve reasonable cathodoluminescence signal-to-noise ratios. Two-dimensional materials have proven particularly susceptible to beam-induced modifications, yielding both obstacles to high spatial-resolution measurement and opportunities for beam-induced patterning of quantum photonic systems. Here pan-sharpening techniques are applied to cathodoluminescence microscopy in order to address these challenges and experimentally demonstrate the promise of pan-sharpening for minimally-perturbative high-spatial-resolution spectrum imaging of beam-sensitive materials.

2D materials↗

Soft matter and nanomaterials characterization by cryogenic transmission electron microscopy

Soft matter has historically been an unlikely candidate for investigation by electron microscopy techniques due to damage by the electron beam as well as inherent instability under a high vacuum environment. Characterization of soft matter has often relied on ensemble-scattering techniques. The recent development of cryogenic transmission electron microscopy (cryo-TEM) provides the soft matter community with an exciting opportunity to probe the structure of soft materials in real space. Cryo-TEM reduces beam damage and allows for characterization in a native, frozen-hydrated state, providing direct visual representation of soft structure. This article reviews cryo-TEM in soft materials characterization and illustrates how it has provided unique insights not possible by traditional ensemble techniques. Soft matter systems that have benefited from the use of cryo-TEM include biological-based “soft” nanoparticles (e.g., viruses and conjugates), synthetic polymers, supramolecular materials as well as the organic–inorganic interface of colloidal nanoparticles. We conclude that while many challenges remain, such as combining structural and chemical analyses; the opportunity for soft matter research to leverage newly developed cryo-TEM techniques continues to excite.

36 MATERIALS SCIENCE↗

Identification of interstratified mica and pyrophyllite monolayers within chlorite using advanced scanning/transmission electron microscopy

Interstratified clay minerals reflect the weathering degree and record climatic conditions and the pedogenic processes in the soil. It is hard to distinguish a few layers of interstratified clay minerals from the chlorite matrix, due to their similar two-dimensional tetrahedral-octahedral-tetrahedral (TOT) structure and electron-beam sensitive nature during transmission electron microscopy (TEM) imaging. In this study, we used multiple advanced TEM techniques including low-dose high-resolution TEM (HRTEM), high-angle annular dark-field scanning transmission electron microscopy (HAADF-STEM) imaging combined with energy-dispersive spectroscopic (EDS) mapping to study interstratified layers in a chlorite sample from Changping, Beijing, China. We demonstrated an interstratified mica or pyrophyllite monolayer could be well distinguished from the chlorite matrix by projected atomic structures, lattice spacings, and chemical compositions with advanced TEM techniques. Further investigation showed two different transformation mechanisms from mica or pyrophyllite to chlorite: either a 4 A increase or decrease in the lattice spacing. Lastly, this characterization approach can be extended to the studies of other electron-beam sensitive minerals.

36 MATERIALS SCIENCE↗

Optical Spectroscopy and Scanning Tunneling Microscopy Studies of Molecular Adsorbates and Anisotropic Ultrathin Films

The goal of the research under this project was to develop sufficient fundamental understanding to allowthe controlled preparation of nano-, and meso-structured surfaces with novel optical propertiesand chemical reactivity. The research placed an emphasis on the synthesis of, sometimes complex, surface structures under conditions that allow for detailed control and understanding of the composition and structure and the subsequent relationship to properties and chemical reactivity. In this research we utilized a combination of optical probes (Polarization and angle dependent laser reflectivity and Laser Raman Scattering) with modern surface imaging experiments (electron microscopy (SEM, TEM), and variable temperature ultra high vacuum scanning tunneling microscopy (STM)). These experiments were combined with conventional methods of UHV surface science (High Resolution Electron Energy Loss Vibrational Spectroscopy (HREELS), Auger electron spectroscopy (AES), x-ray photoelectron spectroscopy (XPS) and thermal desorption spectroscopy (TDS)). The conventional surface probes provide well-tested methods for the preparation and characterization of substrates. The optical probes used provided powerful methods for the characterization of the structure dependent optical properties of novel molecular and nanometer scale, and mesoscale surface structures as well as molecular identification and quantification of adsorbates in monolayers and ultrathin films. A combination of STM and SEM/TEM were utilized to study the growth of mesoscopically ordered nanometer sized metal and metal oxide structures on well-defined substrates such as highly ordered pyrolytic graphite (HOPG). We developed methods (e.g.photoelectrochemical deposition) to decorate nanometer scale metal oxide structures with transition metal nanoparticles generating Nanoparticles on Nanoscale substrate materials (NpNs). The electronic structure and chemical properties of these new structures were studied and contrasted with those of the more conventional nanoparticles on macroscopic substrate materials.

36 MATERIALS SCIENCE↗

Kelvin Probe Force Microscopy for High-Resolution Imaging of Hydrogen in Steel and Aluminum Alloys (Q3 Progress Report)

SRNL is working with Sandia NL, Pacific Northwest NL and Oak Ridge NL in the H-Mat consortium with the objective of developing materials with a higher resistance to hydrogen attack. Understanding the mechanism of hydrogen interactions in metal alloys is continually a topic of interest for applications which involve the long-term storage of hydrogen. Atomic hydrogen segregates to regions of extended defects, such as grain and phase boundaries, and can cause stress and premature cracking through a process known as hydrogen embrittlement. Advanced microstructural imaging techniques, with minimal sample preparation needs, that are capable of resolving hydrogen segregation at the nanometer scale is needed. Current imaging technologies to aid in understanding the effects of hydrogen in metals involve primarily fractography after mechanical testing. Hydrogen segregated at the surface and particularly at surface defect sites changes the local work function of the material. This can be measured by Kelvin Probe Force Microscopy, KPFM, a variant of atomic force microscopy (AFM). KPFM produces surface potential images and is capable of measuring the local change in work function of surfaces with very high spatial resolution. The spatial resolution of KPFM is optimally ~5 nm, yielding very high hydrogen concentration/microstructure coloration capabilities. By locating the presence of hydrogen and its relationship with extended defects, it may be possible to develop microstructures less susceptible to hydrogen embrittlement. The objective of this effort is to assess the utility of KPFM to determine the H 2 concentration profiles surrounding complex microstructural features in high strength steel and aluminum alloys subjected to high pressure hydrogen exposure.

08 HYDROGEN↗

Deciphering Atmospheric Ice Nucleation using Molecular-Scale Microscopy

Atmospheric ice affects Earth's radiative properties and initiates most precipitation. Growing ice typically requires a particle, often airborne mineral dust, e.g., to catalyze freezing of supercooled cloud droplets. How chemistry, structure and morphology determine the ice-nucleating ability of minerals remains elusive. Not surprisingly, poor understanding of a erosol-cloud interactions is a major source of uncertainty in climate models. In this project, we combine d optical microscopy with atomic force microscopy to explore the mechanisms of initial ice formation on alkali feldspar, a mineral proposed to dominate ice nucleation in Earth's atmosphere. When cold air becomes supersaturated with respect to water, we discovered that supercooled liquid water condenses at steps without having to overcome a nucleation barrier, and subsequently freezes quickly. Our results imply that steps, common even on macroscopically flat feldspar surfaces, can accelerate water condensation followed by freezing, thus promoting glaciation and dehydration of mixed - phase clouds. Motivated by the fact that current climate simulations do not properly account for feldspar's extreme efficiency to nucleate ice, we modified DOE's climate model, the Energy Exascale Earth System Model (E3SM), to increase the activation of ice nucleation on feldspar dust. This included adding a new aerosol tracer into the model and updating the ice nucleation parameterization, based on Classical Nucleation Theory, for multiple mineral dust tracers. Although t he se modifications have little impact on global averages , predictions of regional averages can be strongly affected .

Thurmer, Konrad↗

Imaging Macromolecular Structural Dynamics with Low-Dose, Time-Resolved Transmission Electron Microscopy

All well-established experimental methods for investigating the structure of biological macromolecules have spatial and/or temporal limitations inherent to the technique that limit their applicability to studying macromolecular dynamics. The ability to measure macromolecular dynamics is key to gaining predictive mastery of biological systems. This work demonstrates that sufficient data can be acquired from low-Z soft materials using dynamic transmission electron microscopy (DTEM) to potentially allow measurements of macromolecular motion. While a dynamic measurement of macromolecular motion or structural change requires further effort, it is evident from this work that this is feasible under specific experimental conditions that can be achieved using low-dose, time-resolved transmission electron microscopy.

59 BASIC BIOLOGICAL SCIENCES↗

Kelvin Probe Force Microscopy for High-Resolution Imaging of Hydrogen in Steel and Aluminum Alloys

SRNL is working with Sandia NL, Pacific Northwest NL and Oak Ridge NL in the H-Mat consortium with the objective of developing materials with a higher resistance to hydrogen attack. Understanding the mechanism of hydrogen interactions in metal alloys is continually a topic of interest for applications which involve the long-term storage of hydrogen. Atomic hydrogen segregates to regions of extended defects, such as grain and phase boundaries, and can cause stress and premature cracking through a process known as hydrogen embrittlement. Advanced microstructural imaging techniques, with minimal sample preparation needs, that are capable of resolving hydrogen segregation at the nanometer scale is needed. Current imaging technologies to aid in understanding the effects of hydrogen in metals involve primarily fractography after mechanical testing. Hydrogen segregated at the surface and particularly at surface defect sites changes the local work function of the material. This can be measured by Kelvin Probe Force Microscopy, KPFM, a variant of atomic force microscopy (AFM). KPFM produces surface potential images and is capable of measuring the local change in work function of surfaces with very high spatial resolution. The spatial resolution of KPFM is optimally ~5 nm, yielding very high hydrogen concentration/microstructure coloration capabilities. By locating the presence of hydrogen and its relationship with extended defects, it may be possible to develop microstructures less susceptible to hydrogen embrittlement. The objective of this effort is to assess the utility of KPFM to determine the H 2 concentration profiles surrounding complex microstructural features in high strength steel and aluminum alloys subjected to high pressure hydrogen exposure.

08 HYDROGEN↗

Open Source Platform for Live Processing of High Data Rate Electron Microscopy (SBIR Phase I Award Topic 15, Subtopic B, Final Scientific / Technical Report)

4D scanning transmission electron microscopy (STEM) is experiencing a revolution both in terms of data size, and data veracity, as are many other areas of experimental data acquisition. This presents enormous opportunities to make new scientific discoveries, but is also hamstrung by aging software that is no longer fit for purpose. Experimental data acquisition platforms must make the same investments in software infrastructure that the simulation community made decades ago to take advantage of high-performance computing (HPC) if they hope to realize the full potential of the latest advances made in detector technology. This requires rethinking the design and deployment of hardware, moving away from small, fixed commodity computing capabilities with closed interfaces to open, modular, scalable systems designed for parallelism and throughput. The technical approach will leverage best-in-class open source technologies, and develop new approaches strategically to build an open source platform for experimental data acquisition targeting high data rate electron microscopy. The project will develop a software platform that uses the power and performance of modern HPC resources to ingest the large volume of data produced by electron microscopes using direct electron detectors. A set of configurable pipelines will be used to enable the processing to be tailored to the problem being investigated with builtin visualization of data at interactive rates. This project will leverage investments made by the DOE and other agencies to provide a powerful software platform for the experimental data community working with most powerful electron microscopes, such as 4D STEM detectors. It will create a platform that serves as a reference for the community. Permissive open source licensing will make the platform available to all, with a simple deployment strategy offering the ability to keep data close to where it is generated. This advanced software platform will require customization for each deployment, creating opportunities for software services that are typically offered to extend open source software platforms.

97 MATHEMATICS AND COMPUTING↗

Nanomechanics and Electronic Structure of Organic Photovoltaics in Real Application Conditions by Advanced Scanning Probe Microscopy (Final Technical Report for Project DE-SC0018041)

This project report consists of the following three sections: A.) Investigation of Charge Transport Properties in Semiconducting Conjugated Polymer Blends Using Computational Chemistry and Experiments: This section provides unpublished but valuable research results that correlate the electronic structure of PCBM:PCDTBT organic photovoltaic systems with their current-voltage characteristics. The presentation is structured in the form of a scientific publication. B.) Scanning Probe Microscopy Methodology Development Efforts for Organic Photovoltaic Materials: This section summarizes various published works focusing on advancements in scanning probe microscopy methods. Each sub-section corresponds to a scientific publication for which the abstract and citation are provided. C.) Other Publications Supported by the Project: This section lists additional published works partially supported by the project, which are not included in the previous two sections.

36 MATERIALS SCIENCE↗

Developing High-Flux Ion Soft Landing with Mass-Selection for Improved Cryo-Electron Microscopy

The goal of this project is to redesign and repurpose existing high-flux ion soft-landing (SL) instrumentation developed at PNNL for new structural biology applications by integrating SL, mass-selection/separation of high mass-to-charge species, native mass spectrometry (MS), and cryo-electron microscopy (EM) to generate a workflow enabling structural and functional annotation of proteins and other complex biological samples. Ultimately, this work will result in a new instrument for mass-selection and SL based cryo-EM sample preparation and potentially increase the impact of PNNL and the broader microscopy community through commercial licensing.

47 OTHER INSTRUMENTATION↗

Oxidized structure and Compositional properties of 1144 phase FBS by analytical electron microscopy

The 1144 phase (Ae1A1Fe4As4) shows a strong advantage of engineering fabrication among Fe Iron)-based superconductor (FBS) family due to the robustness of its superconducting properties with respect to chemical inhomogeneities, granted by its uniform crystalline-layered structure. This regularity is furthermore associated to crystalline defects capable of acting as efficient pinning centers, which high critical currents achieved at high fields for these superconductors. Like other FBS phases, its lossless current-carrying capability can be remarkably degraded by distractions at grain boundaries (GBs). GB oxidation is an issue of upmost importance to the realization of the practical FBS application for high field (> 20T) magnet. In this study, we explore oxidized grain boundary and intrinsic grain structural properties of 1144 polycrystalline samples by applying analytical electron microscopy such as atomic resolution scanning transmission electron microscopy and atom probe tomography. These structural properties of samples produced by a mechanochemically assisted synthesis are evaluated following the degradation of superconducting properties due to oxidation. We observe a strong correlation between the contamination at grain boundaries and the decrease of transport properties of the bulk sample, while the crystallin structure seems to be not affected by the oxidation.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Material Properties of Zirconium Hydride Phases in Zircaloy-4 Getter Tubes Mapped by Atomic Force Microscopy

Nickel plated Zircaloy-4 tubing (“getter tubing”) is an important functional component in Tritium Producing Burnable Absorber Rods (TBPARs). Getter tubes are used to capture tritium produced during reactor operations and convert it from a gas to a solid by reacting it with Zr to form ZrHx compounds. Previous studies (PNNL-27232, TTP-8-004, and TTP-30710) on forming Zircaloy-4 hydrides demonstrated that hydride concentration gradients formed under prototypic hydriding conditions and that the microstructure of hydrides formed at 350°C is different than those formed at 500°C, a temperature typically used by the Tritium Technology Program (TTP) for getter rate loading experiments. Differences in hydride distribution, microstructure, and phases were characterize using scanning electron microscopy methods. However, the impact of these differences on material properties is not well understood. The goal of this project was to determine whether atomic force microscopy could observe subtle differences in material properties of single domains of hydride phases formed in Zircaloy-4. These properties include surface structure, hardness, thermal conductivity, and magnetic susceptibility.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Advanced Multiscale Microscopy Characterization of High Burnup LWR UO 2 Before and After LOCA Testing

Previous microscopy work within the campaign has observed increased porosity coupled with subgrain formation in the mid-radial region of the fuel. However, examinations of high burnup fuel taken from multiple reactors with different operating conditions have shown that this structure can move radially inward depending on the fuel operating conditions. It is currently theorized that inter- and intragranular fission gas bubble nucleation is precursory to the grain subdivision observed in the mid-radial and central regions of the fuel. Characterization of samples after loss-of-coolant accident (LOCA) testing has revealed that these restructured regions with a high density of bubbles and subgrains pulverize during the transient test. It appears that the increase in fission gas bubbles coupled with grain subdivision renders the fuel mechanically weaker during a LOCA transient and thus susceptible to fuel fragmentation relocation and dispersal (FFRD). Work this past fiscal year has prioritized understanding this behavior by using advanced microscopy to investigate fission gas behavior in the as-irradiated and post-LOCA state. Additional work has been performed to verify the theory described above by analyzing multiple post-LOCA optical micrographs and comparing that to as-irradiated microstructural data. This document reports progress in the post-irradiation characterization of high burnup nuclear fuel with emphasis on the restructured fuel regions, particularly how microstructural features influence FFRD and fission gas release behavior in LOCA conditions.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗