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At least 433 records · Page 24

Using light and X-ray scattering to untangle complex neuronal orientations and validate diffusion MRI

Disentangling human brain connectivity requires an accurate description of nerve fiber trajectories, unveiled via detailed mapping of axonal orientations. However, this is challenging because axons can cross one another on a micrometer scale. Diffusion magnetic resonance imaging (dMRI) can be used to infer axonal connectivity because it is sensitive to axonal alignment, but it has limited spatial resolution and specificity. Scattered light imaging (SLI) and small-angle X-ray scattering (SAXS) reveal axonal orientations with microscopic resolution and high specificity, respectively. Here, we apply both scattering techniques on the same samples and cross-validate them, laying the groundwork for ground-truth axonal orientation imaging and validating dMRI. We evaluate brain regions that include unidirectional and crossing fibers in human and vervet monkey brain sections. SLI and SAXS quantitatively agree regarding in-plane fiber orientations including crossings, while dMRI agrees in the majority of voxels with small discrepancies. We further use SAXS and dMRI to confirm theoretical predictions regarding SLI determination of through-plane fiber orientations. Scattered light and X-ray imaging can provide quantitative micrometer 3D fiber orientations with high resolution and specificity, facilitating detailed investigations of complex fiber architecture in the animal and human brain.

59 BASIC BIOLOGICAL SCIENCES↗

LEGUS discovery of a light echo around supernova 2012aw

We have discovered a luminous light echo around the normal Type II-Plateau Supernova (SN) 2012aw in Messier 95 (M95; NGC 3351), detected in images obtained approximately two years after explosion with the Wide Field Channel 3 on board the Hubble Space Telescope by the Legacy ExtraGalactic Ultraviolet Survey. The multi-band observations span from the near-ultraviolet through the optical (F275W, F336W, F438W, F555W, and F814W). The apparent brightness of the echo at the time was ∼21–22 mag in all of these bands. The echo appears circular, although less obviously as a ring, with an inhomogeneous surface brightness, in particular, a prominent enhanced brightness to the southeast. The SN itself was still detectable, particularly in the redder bands. We are able to model the light echo as the time-integrated SN light scattered off of diffuse interstellar dust in the SN environment. We have assumed that this dust is analogous to that in the Milky Way with R{sub V}=3.1. The SN light curves that we consider also include models of the unobserved early burst of light from the SN shock breakout. Our analysis of the echo suggests that the distance from the SN to the scattering dust elements along the echo is ≈45 pc. The implied visual extinction for the echo-producing dust is consistent with estimates made previously from the SN itself. Finally, our estimate of the SN brightness in F814W is fainter than that measured for the red supergiant star at the precise SN location in pre-SN images, possibly indicating that the star has vanished and confirming it as the likely SN progenitor.

79 ASTRONOMY AND ASTROPHYSICS↗

Light scattering by a rough surface of human skin. 2. Diffuse reflectance

Based on the previously calculated luminance factors, we have investigated the integral characteristics of light reflection from a rough surface of the skin with large-scale inhomogeneities under various conditions of the skin illumination. Shadowing of incident and scattered beams by relief elements is taken into account. Diffuse reflectances by the Gaussian and the quasi-periodic surfaces are compared and, in general, both these roughness models are shown to give similar results. We have studied the effect of the angular structure of radiation multiply scattered deep in the tissue and the refraction of rays as they propagate from the dermis to the surface of the stratum corneum on the reflection characteristics of the skin surface. The importance of these factors is demonstrated. The algorithms constructed can be included in the schemes of calculation of the light fields inside and outside the medium in solving various direct and inverse problems of optics of biological tissues. (biophotonics)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Nonstereotypical Distribution and Effect of Ergosterol in Lipid Membranes

Ergosterol, found in fungi and some protist membranes, is understudied compared with cholesterol from animal membranes. Generally, ergosterol is assumed to modulate membranes in the same manner as cholesterol, based on their similar chemical structures. Here we reveal some fundamental structural and dynamical differences between them. Neutron diffraction shows that ergosterol is embedded in the lipid bilayer much shallower than cholesterol. Further, ergosterol does not change the membrane thickness as much as cholesterol does, indicating little condensation effect. Neutron spin echo shows that ergosterol can rigidify and soften membranes at different concentrations. The lateral lipid diffusion measured by quasielastic neutron scattering indicates that ergosterol promotes a jump diffusion of the lipid, whereas cholesterol keeps the same continuous lateral diffusion as the pure lipid membrane. Our results point to quite distinct interactions of ergosterol with membranes compared with cholesterol. These insights provide a basic understanding of membranes containing ergosterol with implications for phenomena such as lipid rafts and drug interactions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Simulation of radiation driven fission gas diffusion in UO 2 , ThO 2 and PuO 2

Below 1000 K it is thought that fission gas diffusion in nuclear fuel during irradiation occurs through atomic mixing due to radiation damage. Here we present a molecular dynamics (MD) study of Xe, Kr, Th, U, Pu and O diffusion due to irradiation. It is concluded that the ballistic phase does not sufficiently account for the experimentally observed diffusion. Thermal spike simulations are used to confirm that electronic stopping remedies the discrepancy with experiment and the predicted diffusivities lie within the scatter of the experimental data. Here, our results predict that the diffusion coefficients are ordered such that D* 0 > D* Kr > D* Xe > D* U . For all species >98.5% of diffusivity is accounted for by electronic stopping. Fission gas diffusivity was not predicted to vary significantly between ThO 2 , UO 2 and PuO 2 , indicating that this process would not change greatly for mixed oxide fuels.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Simulation of energy-dependent electron diffusion processes in the Earth's outer radiation belt

The radial and local diffusion processes induced by various plasma waves govern the highly energetic electron dynamics in the Earth's radiation belts, causing distinct characteristics in electron distributions at various energies. In this study, we present our simulation results of the energetic electron evolution during a geomagnetic storm using the University of California, Los Angeles 3-D diffusion code. Following the plasma sheet electron injections, the electrons at different energy bands detected by the Magnetic Electron Ion Spectrometer (MagEIS) and Relativistic Electron Proton Telescope (REPT) instruments on board the Van Allen Probes exhibit a rapid enhancement followed by a slow diffusive movement in differential energy fluxes, and the radial extent to which electrons can penetrate into depends on energy with closer penetration toward the Earth at lower energies than higher energies. We incorporate radial diffusion, local acceleration, and loss processes due to whistler mode wave observations to perform a 3-D diffusion simulation. Here, our simulation results demonstrate that chorus waves cause electron flux increase by more than 1 order of magnitude during the first 18 h, and the subsequent radial extents of the energetic electrons during the storm recovery phase are determined by the coupled radial diffusion and the pitch angle scattering by EMIC waves and plasmaspheric hiss. The radial diffusion caused by ULF waves and local plasma wave scattering are energy dependent, which lead to the observed electron flux variations with energy dependences. Lastly, this study suggests that plasma wave distributions in the inner magnetosphere are crucial for the energy-dependent intrusions of several hundred keV to several MeV electrons.

58 GEOSCIENCES↗

Applying Nonlinear Diffusion Acceleration to Fixed-Source Problems with Anisotropic Scattering - Paper 15

Work over the last several years has demonstrated the impressive performance gains that can be attained by using Moment-Based Acceleration (MBA), or High-Order/Low-Order (HOLO), methods in a variety of transport applications. In the field of neutronics, Nonlinear Diffusion Acceleration (NDA) has been used to accelerate the solution to the fixed-source problem and the k-eigenvalue problem. These methods efficiently move a major portion of the computational work out of the full phase-space (high-order (HO)) domain into a reduced phase-space (low-order (LO)) setting. In previous implementations, NDA has only been applied to isotropic scattering problems. In this paper, we will extend this methodology to anisotropic scattering. This initial work on anisotropic scattering will focus on the 1-D multi-group neutron transport equation. This summary focuses on a fixed-source problem, but the extension to criticality problems is straight-forward via NDA-NCA. Within this paper, we have described a method for extending Nonlinear Diffusion Acceleration to solve problems with anisotropic scattering. We demonstrated that a consistent low-order system, resembling the low-order system from, could be constructed. We demonstrated that the NDA method performed exceptionally in the presence of anisotropic scattering. NDA reduced the number of iterations required to meet the convergence tolerance by a factor of 500 over source iteration for a one fixed-source problem and by 3.5-50 x for the Henyey-Greenstein problems. This method is equally well-suited for eigenvalue problems. The NDA method allows us to transition the eigenvalue iteration to the low-order domain.

61 RADIATION PROTECTION AND DOSIMETRY↗

SCATTERED EMISSION FROM z {approx} 1 GALACTIC OUTFLOWS

Mapping Mg II resonance emission scattered by galactic winds offers a means to determine the spatial extent and density of the warm outflow. Using Keck/LRIS spectroscopy, we have resolved scattered Mg II emission to the east of 32016857, a star-forming galaxy at z = 0.9392 with an outflow. The Mg II emission from this galaxy exhibits a P-Cygni profile, extends further than both the continuum and [O II] emission along the eastern side of the slit, and has a constant Doppler shift along the slit which does not follow the velocity gradient of the nebular [O II] emission. Using the Sobolev approximation, we derive the density of Mg{sup +} ions at a radius of 12-18 kpc in the outflow. We model the ionization correction and find that much of the outflowing Mg is in Mg{sup ++}. We estimate that the total mass flux could be as large as 330-500 M{sub Sun} yr{sup -1}, with the largest uncertainties coming from the depletion of Mg onto grains and the clumpiness of the warm outflow. We show that confining the warm clouds with a hot wind reduces the estimated mass flux of the warm outflow and indicates a mass-loading factor near unity in the warm phase alone. Based on the high blue luminosities that distinguish 32016857 and TKRS 4389, described by Rubin et al., from other galaxies with P-Cygni emission, we suggest that, as sensitivity to diffuse emission improves, scattering halos may prove to be a generic property of star-forming galaxies at intermediate redshifts.

79 ASTRONOMY AND ASTROPHYSICS↗

Monte Carlo study of non-diffusive relaxation of a transient thermal grating in thin membranes

In this paper, the impact of boundary scattering on non-diffusive thermal relaxation of a transient grating in thin membranes is rigorously analyzed using the multidimensional phonon Boltzmann equation. The gray Boltzmann simulation results indicate that approximating models derived from previously reported one-dimensional relaxation model and Fuchs-Sondheimer model fail to describe the thermal relaxation of membranes with thickness comparable with phonon mean free path. Effective thermal conductivities from spectral Boltzmann simulations free of any fitting parameters are shown to agree reasonably well with experimental results. These findings are important for improving our fundamental understanding of non-diffusive thermal transport in membranes and other nanostructures.

36 MATERIALS SCIENCE↗

A mechanism for ageing in a deeply supercooled molecular glass

Measurements of the decay of electric fields, formed spontaneously within vapour-deposited films of cis-methyl formate, provide the first direct assessment of the energy barrier to secondary relaxation in a molecular glass. At temperatures far below the glass transition temperature, the mechanism of relaxation is shown to be through hindered molecular rotation. Magnetically-polarised neutron scattering experiments exclude diffusion, which is demonstrated to take place only close to the glass transition temperature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Galactic echoes

Gaia has revealed a variety of substructures in the phase space of stars in the Solar neighbourhood, including the vertical ‘Snail’ $(z, v_z)$ in space. Such substructures are often interpreted as the incompletely phase-mixed response of the disc stars to a single perturbation, such as an impulsive encounter with a satellite galaxy. In this paper, we consider the possibility that such structures contain manifestations of phase-space echoes. First established in plasma physics in the 1960s, echoes arise when a collisionless system is perturbed twice: the macroscopic responses to both perturbations mix to small scales in phase space, whereupon they couple non-linearly, producing a third macroscopic ‘echo’ response without the need for a third perturbation. We derive the galactic analogue of the plasma echo theory using angle-action variables and apply it to a one-dimensional model of vertical motion in the Milky Way. We verify the predicted echo behaviour using idealized test particle simulations, both with and without the inclusion of diffusion through orbital scattering off molecular clouds. While we conclude that the Gaia Snail itself is unlikely a (pure) echo effect, the basic physics we uncover is sufficiently generic that we expect phase-space echoes to be common in disc galaxies.

Galaxy: evolution↗

Analytical theory for proton correlations in common-water ice I h

In this work, we provide a fully analytical microscopic theory for the proton correlations in water ice Ih. We compute the full diffuse elastic neutron scattering structure factor, which we find to be in excellent quantitative agreement with Monte Carlo simulations. It is also in remarkable qualitative agreement with experiment, in the absence of any fitting parameters. Our theory thus provides a tractable analytical starting point to account for more delicate features of the proton correlations in water ice. In addition, it directly determines an effective field theory of water ice as a topological phase.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Reconstructing phonon mean-free-path contributions to thermal conductivity using nanoscale membranes

Knowledge of the mean-free-path distribution of heat-carrying phonons is key to understanding phonon-mediated thermal transport. We show that thermal conductivity measurements of thin membranes spanning a wide thickness range can be used to characterize how bulk thermal conductivity is distributed over phonon mean free paths. A noncontact transient thermal grating technique was used to measure the thermal conductivity of suspended Si membranes ranging from 15–1500 nm in thickness. A decrease in the thermal conductivity from 74–13% of the bulk value is observed over this thickness range, which is attributed to diffuse phonon boundary scattering. Because of the well-defined relation between the membrane thickness and phonon mean-free-path suppression, combined with the range and accuracy of the measurements, we can reconstruct the bulk thermal conductivity accumulation vs. phonon mean free path, and compare with theoretical models.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Does inhomogeneous big bang nucleosynthesis produce an inhomogeneous element distribution today?

Inhomogeneous big bang nucleosynthesis (BBN) produces a spatially inhomogeneous distribution of element abundances at $T \sim 10^9$ K , but subsequent element diffusion will tend to erase these inhomogeneities. In this work, we calculate the cosmological comoving diffusion length for the BBN elements. This diffusion length is limited by atomic scattering and is therefore dominated by diffusion when the atoms are neutral, between the redshifts of recombination and reionization. We find that the comoving diffusion length today is $d_{\text{com}} ≈ 70$ pc for all of the elements of interest except 7 Li , for which $d_{\text{com}}$ is an order of magnitude smaller because 7 Li remains ionized throughout the relevant epoch. This comoving diffusion length corresponds to a substellar baryonic mass scale and is roughly equal to the horizon scale at BBN. These results lend support to the possibility that inhomogeneities on scales larger than the horizon at BBN could lead to a spatially inhomogeneous distribution of elements today, while purely subhorizon fluctuations at BBN can result only in a homogeneous element distribution at present.

79 ASTRONOMY AND ASTROPHYSICS↗

Structural magnetic glassiness in the spin ice Dy 2 Ti 2 O 7

The origin and nature of glassy dynamics presents one of the central enigmas of condensed-matter physics across a broad range of systems ranging from window glass to spin glasses. The spin-ice compound Dy 2 Ti 2 O 7 , which is perhaps best known as hosting a three-dimensional Coulomb spin liquid with magnetically charged monopole excitations, also falls out of equilibrium at low temperature. How and why it does so remains an open question. Based on an analysis of low-temperature diffuse neutron-scattering experiments employing different cooling protocols alongside recent magnetic noise studies, combined with extensive numerical modeling, we argue that upon cooling, the spins freeze into what may be termed a “structural magnetic glass,” without an a priori need for chemical or structural disorder. Specifically, our model indicates the presence of frustration on two levels, first producing a near-degenerate constrained manifold inside which phase ordering kinetics is in turn frustrated. A remarkable feature is that monopoles act as sole annealers of the spin network and their pathways and history encode the development of glass dynamics, allowing the glass formation to be visualized. Our results suggest that spin ice Dy 2 Ti 2 O 7 provides one prototype of magnetic glass formation specifically and a setting for the study of kinetically constrained systems more generally.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Dynamical Threshold of Diluteness of Soft Colloids

The dynamics of soft colloids in solutions is characterized by internal collective motion as well as center-of-mass diffusion. Using neutron scattering we demonstrate that the competition between the relaxation processes associated with these two degrees of freedom results in strong dependence of dynamics and structure on colloid concentration, c, well below the overlap concentration c*. Triggered by the increasing inter-particle collisions, substantial structural dehydration and slowing-down of internal dynamics occurs before geometrically defined colloidal overlap develops. This observation is surprising since it is generally believed that the internal dynamics and conformation of soft colloidal particles essentially remain invariant below c*. The competition between these two relaxation processes gives rise to a new dynamically-defined dilute threshold concentration well below c*.

Chen, Wei-Ren↗

Development and applications of retro-reflective surfaces for ultrasound in LBE

The Belgian Nuclear Research Centre SCK-CEN is in the process of developing MYRRHA - a fast flux research reactor to replace the aging BR2. MYRRHA is conceptualized as an accelerator driven system cooled by lead bismuth eutectic mixture (LBE). As LBE is opaque to visual light, ultrasonic measurement techniques are employed as the main technology to provide feedback to submerged operations when needed. Conceptually, MYRRHA is a pool type reactor divided in a cold lower plenum and hot upper plenum separated by a diaphragm that forces the main flow through the core. The main flow is cooled by four heat exchangers and driven by two liquid metal pumps. One of the tasks tackled using ultrasound is locating a potentially lost fuel assembly to assist a recovery operation. As all fuel manipulations in MYRRHA are performed in the lower plenum, a potentially lost fuel assembly is located in the lower plenum. Buoyancy will force the lost fuel assembly to float against the diaphragm unless it is still partially inserted in the core. Because of the latter situation, an ultrasonic scan localizing the fuel assembly should be performed from a large distance to avoid a collision with such a partially inserted fuel assembly. Unfortunately, standard machined stainless steel objects, such as a fuel assembly, reflect an ultrasonic pulse in a specular way which induces stringent requirements on the alignment of the ultrasonic sensor with respect to the fuel assembly as we cannot rely on diffuse reflections and/or scattering of the ultrasonic pulse. Moreover, increasing the distance also increases geometric spreading and absorption of the pulse weakening the signal amplitude even faster to noise levels when deviating from perfect alignment. An alternative approach consists in relying on reflections from the known surroundings: a lost fuel assembly will block the line-of-sight to the diaphragm resulting in an anomaly in the reflection - either a shorter than expected time-of-flight of the pulse or a complete absence of a reflection like a shadow. In that way, it suffices to align the sensor with the diaphragm instead of the fuel assembly which is much easier to achieve as the robotics on which the sensor is mounted move parallel with the diaphragm. The alignment requirement in the latter approach can be further relaxed by using a tiling of retro-reflectors on the lower surface of the diaphragm. In that way, alignment becomes less vital and the main source of acoustic energy loss - geometric spread of the beam - is almost completely removed, leaving only absorption losses. In this paper, we present the first results in developing a retro reflectance surface for ultrasound in LBE. We present experimental results for different designs of retro-reflectors in both water and LBE. We discuss both linear and array retro-reflectors of different sizes and investigate the influence of the main relevant ultrasonic parameters such as wavelength and spot size on the strength of the received reflection under different alignment angles. We also demonstrate how retro-reflective surfaces can be exploited when localizing objects using linear and rotating scanning methods. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Reassessment of uncertainties for the PU-MET-INTER-002 benchmark - 14432

Uncertainty for the PU-MET-INTER-002 benchmark of ZPR-6/10 was unusually large for a ZPR assembly and was dominated by the uncertainties in matrix tube pitch and composition uncertainties for plutonium, graphite and stainless steel plates. The original uncertainty analysis for PU-MET-INTER-002 was limited by computer resources, software and the nuclear data available in 2002, all of which have been improved since. An as-built Monte Carlo model of ZPR-6/10 was used to quantify components of the transformation from the detailed model to a simplified RZ benchmark in 2002. Compositional uncertainties were estimated based upon TWODANT calculations of the RZ benchmark model (20 group, S{sub 8} - P{sub 1}). MC{sup 2}-2 was used with END/B-V.2 data to generate homogenized cross section data for TWODANT. The MC{sup 2}-2 calculations did not account for lattice cell spatial heterogeneity which was driven by the manual process required to generate ∼80 modifications to the deterministic model and by the software limitations of MC{sup 2}-2. Improvements to DIF3D-VARIANT, development of the MC{sup 2}-3 and BuildZPRModel codes, and better computer resources make accurate 3D transport calculations of reactivity changes practical today. BuildZPRModel imports the as-built geometry and creates a 'drawer' homogenized DIF3D model where each radial DIF3D mesh is the exact size of a single ZPR matrix tube and drawer. A MC{sup 2}-3 input is constructed for each drawer to produce homogenized cross section data where the spatial cell heterogeneity is captured by solving a 1D MOC transport calculation on the ultrafine energy group level. Collapsing 3D drawers into 1D MC{sup 2}-3 drawer models follows conventional procedures and is done by BuildZPRModel. MCNP6 was used to re-compute relevant geometry components of the uncertainty using ENDF/B-VII.0 data with the as-built model. Changes in the geometry components compared with earlier results are insignificant. DIF3D calculations of the compositional uncertainties were performed using 33, 70, 116, 230, 425, and 703 group energy structures and selectively combined with P{sub 3}-P{sub 7} transport approximations and P{sub 1} and P{sub 3} scattering kernels. 3D diffusion theory calculations were also performed for comparison. Many composition uncertainty components were essentially unchanged with the updated methodology. However, the dominant experimental uncertainty for PU-MET-INTER-002 is the composition of stainless steel. The new calculations reduce the stainless steel uncertainty from ∼115 pcm to ∼70 pcm which significantly reduces the total uncertainty for PU-MET-INTER-002. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗