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At least 415 records · Page 23

Monitoring Regional Forest Disturbances across the US with near Real Time MODIS NDVI Products Resident to the ForWarn Forest Threat Early Warning System

Forest threats across the US have become increasingly evident in recent years. Sometimes these have resulted in regionally evident disturbance progressions (e.g., from drought, bark beetle outbreaks, and wildfires) that can occur across multiyear durations and have resulted in extensive forest overstory mortality. In addition to stand replacement disturbances, other forests are subject to ephemeral, sometimes yearly defoliation from various insects and varying types and intensities of ephemeral damage from storms. Sometimes, after prolonged severe disturbance, signs of recovery in terms of Normalized Difference Vegetation Index (NDVI) can occur. The growing prominence and threat of forest disturbances in part have led to the formation and implementation of the 2003 Healthy Forest Restoration Act which mandated that national forest threat early warning system be developed and deployed. In response, the US Forest Service collaborated with NASA, DOE Oakridge National Laboratory, and the USGS Eros Data Center to build and roll-out the near real time ForWarn early warning system for monitoring regionally evident forest disturbances. Given the diversity of disturbance types, severities, and durations, ForWarn employs multiple historical baselines that are used with current NDVI to derive a suite of six forest change products that are refreshed every 8 days. ForWarn employs daily quarter kilometer MODIS NDVI data from the Aqua and Terra satellites, including MOD13 data for deriving historical baseline NDVIs and eMODIS 7 NDVI for compiling current NDVI. In doing so, the Time Series Product Tool and the Phenological Parameters Estimation Tool are used to temporally de-noise, fuse, and aggregate current and historical MODIS NDVIs into 24 day composites refreshed every 8 days with 46 dates of products per year. The 24 day compositing interval enables disturbances to be detected, while minimizing the frequency of residual atmospheric contamination. Forest change products are computed versus the previous 1, previous 3, and all previous years in the MODIS record for a given 24 day interval. Other "weekly" forest change products include one computed using an adaptive length compositing method for quicker detection of disturbances, two others that adjust for seasonal fluctuations in normal vegetation phenology (e.g., early versus late springs). This overall approach enables forest disturbance dynamics from a variety of regionally evident biotic and abiotic forest disturbances to be viewed and assessed through the calendar year. The change products are also being utilized for forest change trend analysis and for developing regional forest overstory mortality products. ForWarn's forest change products are used to alert forest health specialists about new forest disturbances. Such alerts are also typically based on available Landsat, aerial, and ground data as well as communications with forest health specialists and previous experience. ForWarn products have been used to detect and track many types of regional disturbances to multiple forest types, including defoliation from caterpillars and severe storms, as well as mortality from both biotic and abiotic agents (e.g., bark beetles, drought, fire, anthropogenic clearing). ForWarn offers products that could be combined with other geospatial data on forest biomass to assess forest disturbance carbon impacts within the conterminous US.

Spruce, Joseph P.↗

[School-Based UV-B Monitoring Project in Support of EOS-CHEM]

This grant is an extension of Grant NAG5-8929 (Drexel Project Number 230026), resulting from extensions necessary to meet changing science objectives as described in the final report for NAG5-8929, a copy of which is attached. The instrument configuration resulting from NAG54929 has remained basically intact. Cosine response measurements conducted by James Slusser s group at Fort Collins, Colorado, in support of the proposal for Aura ground validation mentioned in the final report for NAG5-8929, indicated that there was significant light leakage to the detector through the sides of the nylon housing. This was easily remedied by machining a removable opaque collar (made from the dark same grey rigid plastic plumbing tubing as the collimating tube) that fits around the detector collar. Also during this grant period, data logging procedures were established for the UV-A instrument, to record irradiance before, during, and after an Aura overflight. This is required in order to compare spatial and temporal variability as required for ground validation of data products derived from the Ozone Monitoring Instrument (OMI). Standalone 12-bit loggers from Onset Computer Corporation (the U12 series), which were not available at the start of these projects, makes possible relatively inexpensive logging for these instruments at a usable resolution. configuration and disposition of these instruments, including the final version of a GLOBE protocol for using the instruments, currently depend on action taken on the Aura ground validation proposal submitted in 2004. A copy of that proposal is attached.

Brooks, David R.↗

Review of historical monitoring data on Techa River contamination

The Mayak Production Association was the first Russian site for the production and separation of plutonium. The extensive increase in plutonium production during 1948-1955, as well as the absence of reliable waste-management technology, resulted in significant releases of liquid radioactive effluent into the rather small Techa River. This resulted in chronic external and internal exposure of about 30,000 residents of riverside communities; these residents form the cohort of an epidemiologic investigation. Analysis of the available historical monitoring data indicates that the following reliable data sets can be used for reconstruction of doses received during the early periods of operation of the Mayak Production Association: Temporal pattern of specific beta activity of river water for several sites in the upper Techa region since July 1951; average annual values of specific beta activity of river water and bottom sediments as a function of downstream distance for the whole river since 1951; external gamma-exposure rates near the shoreline as a function of downstream distance for the whole Techa River since 1952; and external gamma-exposure rate as a function of distance from the shoreline for several sites in the upper and middle Techa since 1951.

NASA Discipline Radiation Health↗

Uncertainty Analysis of the GeoNEX Top-of-Atmospheric Reflectance Products Generated from the Third-Generation Geostationary Satellite Sensors

The GeoNEX (Geostationary-NASA Earth eXchange) Level-1G products consist of top-of-atmosphere (TOA) bi-directional reflectance factor (BRF) and brightness temperature generated with data streams from the latest geostationary (GEO) sensors including GOES-16/17 ABI, Himawari-8/9 AHI, and GK-2A AMI on a global tiled common grid (60oN-60o and 180oW-180oE) in geographic coordinates. With their 16 spectral bands, 0.01o/0.02o nadir spatial resolution, and 10-minute temporal resolutions, these products provide exciting opportunity to monitor Earth surface processes. However, the unique Sun-Target-Satellite geometry of geostationary sensors demands special attention in analyzing/interpreting these datasets. In this study we present a systematic analysis on the relationship between the radiometric uncertainties of the GeoNEX TOA reflectance and the corresponding solar/satellite zenith angles. We show that the signal-to-noise ratio (SNR) of the BRF are positively proportional to the square roots of the cosine of solar illuminating zenith angles. That is, the BRF data are noisier earlier in the morning or later in the afternoon than in the mid of the day. The cosine of satellite viewing zenith angles do not directly influence the SNR of the TOA BRF. However, they positively regulate the relative importance of the surface component in the TOA BRF. This means that variations in surface reflectance are more difficult to detect for pixels with larger view zenith angles, even when the SNR of the TOA BRF is the same. We are developing metrics to specify such illumination-view geometry related uncertainties in the GeoNEX L1G TOA BRF products so that this key information can be easily accessed by the user community.

Geostationary satellite↗

GEONEX: Challenges in Producing MODIS-Like Land Products from a New Generation of Geostationary Sensors

The new generation geostationary (GEO) remote sensors (GOES-R ABI, Himawari AHI, and FY4 AGRI) provide high frequency (5-15 minute) observations spatially/spectrally similar to MODIS/VIIRS for land monitoring. These new features of GEO satellite sensors make producing MODIS like land products for terrestrial monitoring possible. The NASA Earth Exchange (NEX) team developed the GEONEX pipeline that is containerized, deployable on NASA Pleiades supercomputer as well as public cloud platforms (e.g. AWS). The processing pipeline is designed to take Himawari Standard Data (HSD) and GOES-16 L1b to generate surface reflectance (SR) and other high-level land remote sensing products. In order to produce low-Earth-orbiting (LEO) remote sensing compatible land products, inter-comparison between Himawari AHI and MODIS Terra/Aqua has been conducted in this research work. Comparisons of TOA reflectance and surface reflectance between AHI and Terra/Aqua are presented. Ray-Matching method was used to locate the co-located pixels, where GEO and LEO sensors look at the land target with similar Viewing Zenith Angle (VZA) and Viewing Azimuth Angle (VAA) simultaneously. Here, we address challenges associated with the selection of qualified pixels of similar solar illumination condition and atmosphere path. We used strict criterion to constrain the pixel selection: the time difference between GEO and LEO observations is less than +-2.5 mins, the cosine of VZA difference is less than 1%, and the VAA difference is less than 10 deg. We also discuss the strong radiometric consistency that the new generation GEO sensors along with the popular LEO sensors would benefit the environmental remote sensing community.

Li, Shuang↗

The Application of Remote Sensing and Machine Learning to Improve Early Warning Systems for Harmful Algal Events in the Highland Lake Chain, TX

Beginning in 2019, harmful algal events have caused canine deaths in both Lady Bird Lake and Lake Travis located near Austin, Texas. These two reservoirs are part of the larger Highland Lakes chain, managed by the City of Austin Department of Watershed Protection (COA DWP) and the Lower Colorado River Authority (LCRA), which fulfill municipal, commercial, and agricultural water demands. Given the recent increase in favorable environmental conditions for algal events in central Texas, NASA DEVELOP partnered with LCRA and COA DWP to improve monitoring and early detection of algal events, utilizing satellite remote sensing and machine learning. Spatially and temporally varied chlorophyll a concentrations, cyanobacteria detections, turbidity, and water surface temperature products are used as environmental proxies. Landsat 8 Operational Land Imager (OLI) and the Sentinel-2 MultiSpectral Instrument (MSI) data were used to provide a combined revisit time of up to ~3 days and < 30 m per pixel products. Chlorophyll a concentrations were estimated using a pre-trained Mixture Density Network, and cyanobacteria detection was accomplished using the Broad Wavelength Algae Index, which can differentiate algal blooms from algal proliferations (mats). In situ data were used to validate remotely sensed measurements and quantify uncertainties. Preliminary results show a good fit between the modeled output and in situ observations, suggesting that remote sensing data can be used to retrieve biogeochemical properties and/or inherent optical properties (IOPs) of water columns in these inland human-made lakes. Uncertainties were introduced from the sensitivity to atmospheric correction, inherent mismatch between satellite and sampling data, and a relatively lower signal-to-noise ratio over water. The resulting products enable near real-time monitoring of environmental proxies relevant to algal event presence in the Highland Lakes chain, and will ultimately support water management, decision making, and risk communication.

Shuyu Chang↗

Gridded Hourly Text Products: A TRMM Data Reduction Approach

The quantity of precipitation data from satellite-based observations is a blessing and a curse. The sheer volume of the data makes it difficult for many researchers to use in targeted applications. This volume increases further as algorithm improvements lead to the reprocessing of mission data. In addition to the overall volume of data, the size and format complexity of orbital granules contribute to the difficulty in using all the available data. Finally, the number of different instruments available to measure rainfall and related parameters further contributes to the volume concerns. In summary, we have an embarrassment of riches. The science team of the Tropical Rainfall Measuring Mission (TRMM) recognized this dilemma and has developed a strategy to address it. The TRMM Science Data and Information System (TSDIS) produces, at the direction of the Joint TRMM Science Team, a number of instantaneous rainfall products. The TRMM Microwave Imager (TMI), the Precipitation Radar and a Combined TMI/PR are the key "instruments" used in this production. Each of these products contains an entire orbit of data. The algorithm code computes not just rain rates but a large number of other physical parameters as well as information needed for monitoring algorithm performance. That makes these products very large. For example, a single orbit of TMI rain rate product is 99 MB, a single orbit of the combined product yields a granule that is 158 MB, while the 80 vertical levels of rain information from the PR yields an orbital product of 253 MB. These are large products that are often difficult for science users to electronically transfer to their sites especially if they want a large period of time. Level 3 gridded products are much smaller, but their 5 or 30 day temporal resolution is insufficient for many researchers. In addition, TRMM standard products are produced in the HDF format. While a large number of user-friendly tools are available to hide the details of the format (including a toolkit developed at TSDIS for the TRMM science team), many potential users shy away

Stocker, Erich↗

Boosting production yield of biomedical peptides

Nuclear magnetic resonance (NMR) technique is employed to monitor synthesis of biomedical peptides. Application of NMR technique may improve production yields of insulin, ACTH, and growth hormones, as well as other synthesized biomedical peptides.

Manatt, S. L.↗

Algorithm Theoretical Basis Document (ATBD) - Stream Stage Measurements: V2.5.1 Water Level Products from Satellite Radar Altimetry

In response to the 2018 NASA ROSES Applied Sciences/Water Resources (NASA HQ Program Official: Dr. Brad Doorn) call for proposals, the “Integration of Remotely Sensed Streamflow Data into Alaska Water Resource Management Agency Operations” project with Principal Investigator (PI) Jack Eggleston USGS, was successful, and had the ultimate goal of creating a series of remotely sensed or derived Alaska river parameters for integration into NWIS. These parameters included surface water height and average reach surface water slope (from altimetry), average reach width (from Landsat imagery), and an associated river discharge derived via theoretical means. The surface water height products were required to have both archival and near real time components, noting the availability of ~25years of potential measurements, and accepting the temporal resolution (10-35days) of the suite of radar altimeters. Each surface water level product was expected to be a continuous time series of observation with a sufficient accuracy to highlight monthly, seasonal and interannual variation. The designated set of river reaches were chosen for their geographical distribution, their reach width, and the presence of a radar altimeter mission satellite overpass. This document describes the procedure associated with the creation of these altimetric surface water level products and is relevant to product Version 2.5.1 available from the Global Water Monitor (GWM) web portal.

Altimetry↗

Contribution of Near Real Time MODIS-Based Forest Disturbance Detection Products to a National Forest Threat Early Warning System

This presentation discusses an effort to compute and post weekly MODIS forest change products for the conterminous US (CONUS), as part of national forest threat early warning system (EWS) known as the U.S. Forest Change Assessment Viewer (FCAV). The US Forest Service, NASA, USGS, and ORNL are working collaboratively to contribute weekly change products to this EWS. Large acreages of the nation's forests are being disturbed by a growing multitude of biotic and abiotic threats that can act either singularly or in combination. When common at regional scales, such disturbances can pose hazards and threats to floral and faunal bio-diversity, ecosystem sustainability, ecosystem services, and human settlements across the conterminous US. Regionally evident forest disturbances range from ephemeral periodic canopy defoliation to stand replacement mortality events due to insects, disease, fire, hurricanes, tornadoes, ice, hail, and drought. Mandated by the Healthy Forest Restoration Act of 2003, this forest threat EWS has been actively developed since 2006 and on-line since 2010. This FCAV system employs 250-meter MODIS NDVI-based forest change products as a key element of the system, providing regional and CONUS scale products in near real time every 8 days. Each forest change product in FCAV is based on current versus historical 24 day composite NDVI data gridded at 231.66 meter resolution. Current NDVI is derived from USGS eMODIS expedited products. MOD13 NDVI is used for constructing historical baselines. CONUS change products are computed for all forests as % change in the current versus historical NDVI. Change products are computed according to previous year, previous 3 years and previous 8 year historical baselines. The use of multiple baselines enables disturbance anomaly phenology to be more fully assessed. CONUS forest change products are posted each week on the FCAV, a web mapping service maintained by the National Environmental Modeling and Analysis Center. The FCAV EWS has been used to aid multiple Federal and State agency forest management activities, including aerial disturbance detection surveys, as well as rapid response preliminary assessments of timber loss due to tornadoes, regional drought studies, and fire damage assessments. The FCAV allows end-users to assess the context of apparent forest vegetation change with respect to ancillary data, such as land cover, topography, hydrology, climate variables, and administrative boundaries. Such change products are being evaluated through case studies involving comparison with higher spatial resolution satellite, aerial, and field data. The presentation will include multiple examples in which regionally evident forest disturbances were successfully detected and monitored with the MODIS-based change products, as part of the FCAV. FCAV's MODIS forest change products enable end-users (e.g., resource managers) to monitor forest hazards at regional scales throughout the year and across the nation.

Spruce, Joseph P.↗

Impact of a Biological Chelator, Lanmodulin, on Minor Actinide Aqueous Speciation and Transport in the Environment

Minor actinides are major contributors to the long-term radiotoxicity of nuclear fuels and other radioactive wastes. Here in this context, understanding their interactions with natural chelators and minerals is key to evaluating their transport behavior in the environment. The lanmodulin family of metalloproteins is produced by ubiquitous bacteria and Methylorubrum extorquens lanmodulin (LanM) was recently identified as one of nature’s most selective chelators for trivalent f-elements. Herein, we investigated the behavior of neptunium, americium, and curium in the presence of LanM, carbonate ions, and common minerals (calcite, montmorillonite, quartz, and kaolinite). We show that LanM’s aqueous complexes with Am(III) and Cm(III) remain stable in carbonate-bicarbonate solutions. Furthermore, the sorption of Am(III) to these minerals is strongly impacted by LanM, while Np(V) sorption is not. With calcite, even a submicromolar concentration of LanM leads to a significant reduction in the Am(III) distribution coefficient (K d , from >10 4 to ~10 2 mL/g at pH 8.5), rendering it even more mobile than Np(V). Thus, LanM-type chelators can potentially increase the mobility of trivalent actinides and lanthanide fission products under environmentally relevant conditions. Monitoring biological chelators, including metalloproteins, and their biogenerators should therefore be considered during the evaluation of radioactive waste repository sites and the risk assessment of contaminated sites.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

Absolute Band Intensity of the Iodine Monochloride Fundamental Mode for Infrared Sensing and Quantitative Analysis

Iodine monochloride (ICl) is a gaseous off-product of molten salt reactors; monitoring this heteronuclear diatomic is of great interest for both environmental and safety purposes. In this paper we investigate the possibility of infrared monitoring of ICl by measuring the far-infrared absorption cross section of its fundamental band near 381 cm -1 . We have performed quantitative studies of the neat gas in a 20 cm cell at 25, 35, 50 and 70 oC at multiple pressures up to ~ 9 Torr and investigated the temperature and pressure dependence of the band’s infrared cross section. Quantitative measurements were problematic due to sample adhesion to the cell walls and windows as well as reactions/possible hydrolysis of ICl to form HCl gas. Effects were mitigated by measuring only the neat gas, using short measurement times and subtracting out the partial pressure of the HCl(g). The integrated band strength is shown to be temperature independent and was found to be equal to 9.1 x 10 -19 (cm 2 /molecule) cm-1. As expected, the temperature dependence of the band profile showed only a small effect over this limited temperature range. Furthermore, we have also investigated using the absorption data along with inverse least squares multivariate methods for the quantitative monitoring of ICl effluent concentrations under different scenarios using infrared (standoff) sensing and compare these results with traditional Beer’s Law (univariate) techniques.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Using Domain Insertion to Create Sulfite Reductases That Present Chemical-Dependent Activities

Domain insertion can be used to create oxidoreductases whose activities are dependent upon analyte binding. To date, most domain insertion studies have targeted relatively small oxidoreductases of known structure, so it remains unclear how to apply this protein engineering approach to large hetero-oligomeric proteins that require dynamic conformational changes for catalysis. To address this question, we studied the effects of peptide and domain insertions on the activity of NADPH-dependent sulfite reductase (SiR) from Escherichia coli, a dodecameric oxidoreductase containing four hemoprotein and eight flavoprotein subunits. SiR mutational tolerance was first evaluated using systematic octapeptide insertion and a cellular selection, which identified regions across the hemoprotein structure that retain parent-like activity following insertion. When a ligand-binding domain was inserted at backbone locations tolerant to peptide insertion, including sites proximal and distal from the intersubunit interfaces, ∼90% retained catalytic activity, and >50% presented activity that is regulated by an endocrine disruptor. With one domain insertion variant, the conditional production of sulfide could be monitored electrochemically from cells using a bioelectrochemical reactor. These results show how systematic peptide insertion can be used to inform domain insertion in a large heterooligomeric protein complex, and they illustrate how SiR can be engineered to convert chemical information in the environment into a redox-active metabolite that diffuses across the cell membrane.

bacteria↗

High-resolution vibrational predissociation spectroscopy of I - ·H 2 O by single-mode CW infrared excitation in a 3D cryogenic ion trap

We describe the integration of a tunable, single-mode, continuous wave infrared laser into a cryogenic ion spectroscopy experiment to measure the rovibrational spectrum of the I - ∙H 2 O complex in the OH stretching region. These upper levels lie about 300 cm -1 above the dissociation threshold. The measurements are carried out by loading the ions in a radiofrequency ion trap at 10 Hz and cooling them to 5 K with pulsed He buffer gas. IR photodissociation (PD) of the I - ∙H 2 O complex is monitored by recording the I - product yield by time-of-flight mass spectrometry as a function of laser wavelength. Very narrow (Δν~75 MHz) rotational lines are observed throughout the spectrum, indicating long (ca. 2 ns) lifetimes for the excited metastable rovibrational levels. Rotational analysis of the band arising from the K”=1 to K’=2 transition of the free OH stretching fundamental yields the structure of the complex for the first time. Over 50% of the trapped ion ensemble in the trap can be photodissociated upon excitation of a single rotational line. This enables very high signal-to-noise in the PD spectrum, and is traced to a mechanism in which the ground state rotational levels are rapidly equilibrated by collisions with the buffer gas.

74 ATOMIC AND MOLECULAR PHYSICS↗

Predicting partner fitness based on spatial structuring in a light-driven microbial community

Microbial communities have vital roles in systems essential to human health and agriculture, such as gut and soil microbiomes, and there is growing interest in engineering designer consortia for applications in biotechnology ( e . g ., personalized probiotics, bioproduction of high-value products, biosensing). The capacity to monitor and model metabolite exchange in dynamic microbial consortia can provide foundational information important to understand the community level behaviors that emerge, a requirement for building novel consortia. Where experimental approaches for monitoring metabolic exchange are technologically challenging, computational tools can enable greater access to the fate of both chemicals and microbes within a consortium. In this study, we developed an in-silico model of a synthetic microbial consortia of sucrose-secreting Synechococcus elongatus PCC 7942 and Escherichia coli W. Our model was built on the NUFEB framework for Individual-based Modeling (IbM) and optimized for biological accuracy using experimental data. We showed that the relative level of sucrose secretion regulates not only the steady-state support for heterotrophic biomass, but also the temporal dynamics of consortia growth. In order to determine the importance of spatial organization within the consortium, we fit a regression model to spatial data and used it to accurately predict colony fitness. We found that some of the critical parameters for fitness prediction were inter-colony distance, initial biomass, induction level, and distance from the center of the simulation volume. We anticipate that the synergy between experimental and computational approaches will improve our ability to design consortia with novel function.

59 BASIC BIOLOGICAL SCIENCES↗

UFMP and CAW Bioreactor Metagenome

CSTR anaerobic bioreactors fed UltraFiltered Milk Permeate (UFMP) and Cottage cheese Acid Whey (CAW) were inoculated with acid sludge microbial communities and monitored overtime for lactic acid production. Samples were taken for metagenomics analyses.

bioreactor metagenome↗

Cost reductions through earth resource satellites in developed countries

Data from detailed studies on the possible economic impact of the use of remote sensing technology in industry and agriculture are presented and analyzed. The utility of satellite surveillance in reduction of crop production forecast error, recognition and monitoring of crop diseases and insect infestations, and range management is evaluated. Application of satellite maps to facilitate land resource decisions, mineral exploration, geological studies, and water resource inventories is considered, as is the usefulness of early storm warning in the reduction of property damage. The cost of remote sensing is compared to that of conventional methods whenever possible.

Schweickart, R. L.↗

An overview of NASA's remote sensing program

The present status of NASA's remote sensing program and its future plans are reviewed, and some investigations into the possible uses of remotely sensed data are briefly summarized. Landsat-1 photographs are presented to demonstrate how such data can be employed for monitoring and forecasting of agricultural production, for watershed management and flood control, and for mineral exploration. The performance of Landsat-2 and expectations for Landsat-C are evaluated. High-priority problems which should be the driving forces for designing space observation systems for the 1980's are outlined, including the problem of world food supply and the relationship between land use and climatic changes. The design of the modular Landsat-D spacecraft, which will fly a thematic mapper for agricultural observations, is described.

Thome, P. G.↗