NUCLEAR WASTEFORM AND BARRIER MATRIX INTERACTIONS WITH GEOLOGIC STRATA IN THE SUBSURFACE OF THE YAMIN PLATEAU, NORTHERN NEGEV, ISRAEL.
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The internal structure of protons and neutrons provides insight into both the dynamical behavior of the constitute quarks and gluons, and emergent properties of the nucleons (such as mass, spin, and electromagnetic distributions). Elastic electron-nucleon scattering can probe the elastic electromagnetic form factors of the nucleon. The electric and magnetic form factors, respectively, encode information about the internal charge and magnetization distributions within the nucleon. Precision data for these form factors, over a broad range of the four-momentum transfer squared, Q^2, can benchmark theoretical models describing the strong interaction of nuclear physics. The Super BigBite Spectrometer (SBS) program in Hall A at Jefferson Lab, is a series of high-precision experiments which seek to significantly extend the Q^2 reach of previous data for the nucleon electromagnetic form factors. The first two experiments of this program are known as G_M^n and the neutron Two Photon Exchange (nTPE) and the data were collected from October 2021 to February 2022. Both experiments were conducted with the simultaneous measurement of D(e,e'n) and D(e,e'p) reactions for quasi-elastic electron-deuteron scattering. The scattered electrons were detected in the BigBite Spectrometer, which features multiple large-acceptance Gas Electron Multiplier (GEM) detectors. The Super BigBite Spectrometer provided simultaneous detection of scattered nucleons, and utilized a large acceptance dipole magnet and Hadron Calorimeter (HCal). The G_M^n experiment provides precision measurements of the neutron magnetic form factor, via the ratio method, over a Q^2 range of 3.0 to 13.5 (GeV/c)2. From this data analysis, preliminary values for G_M^n/µ_n G_D are extracted. For Q^2=4.48 (GeV/c)2 we find G_M^n/µ_n G_D=0.9546±0.0132 and for Q^2=4.476 (GeV/c)2 we find G_M^n/µ_n G_D=0.9563±0.0110. These preliminary G_M^n/µ_n G_D values are more precise than existing world data in this Q^2 regime and are consistent with the most recent parameterization of the G_M^n/µ_n G_D world data. The nTPE experiment provides a first measurement of the neutron Rosenbluth Slope and seeks to quantify the two-photon exchange(TPE) contribution to elastic electron-neutron scattering at a fixed Q^2=4.5 (GeV/c)2 with two different beam energies and scattering angle values. For data of the proton form factor ratio, µ_p G_E^p/G_M^p, significant discrepancies exist between values obtained from Rosenbluth Separation and polarization transfer measurement, particularly at large Q^2, and TPE contributions are thought to resolve this discrepancy. The impacts of TPE contributions have not yet been experimentally established for the neutron. From the data analysis presented in this dissertation, a preliminary result for the neutron Rosenbluth Slope is found as S^n=(G_E^n )^2/t_n (G_M^n )^2=0.0916±0.0476 for Q^2=4.48 (GeV/c)2. This value of the neutron Rosenbluth Slope is consistent with the world data extrapolation and the absence of large TPE corrections.
We perform ab initio calculations of three-point mass differences in the odd- and even-mass 39−49Ca isotopes to probe nuclear superfluidity via empirical neutron pairing gaps. We also quantify the sensitivity of those gaps to the parameters of the interaction at mean-field level. Recent studies employing accurate chiral nuclear interactions have found these gaps to be too small. We show that experimental values can be reproduced at mean-field level by substantially increasing the attraction of the singlet 𝑆 -wave two-nucleon contact interaction, but doing so induces an unphysical bound state of the dineutron. The sensitivity of these predictions to the full calibration of the nuclear interaction is then studied by performing Bayesian posterior sampling in a delta-full chiral effective field theory at third chiral order. We find that pairing gaps remain largely unaffected, leaving the explanation of nuclear superfluidity as a future task for improved many-body modeling and refined interactions at higher chiral orders.
The human immunodeficiency virus (HIV) can infect nondividing cells by interacting with the host nuclear pore complex. The host nuclear pore protein NUP153 directly interacts with the HIV capsid to promote viral nuclear entry.
Understanding the nucleon-nucleon interaction is a fundamental task in nuclear physics, as NN interaction models are a crucial input to modern nuclear structure calculations. While great progress has been made toward understanding this interaction, the available state-of-the-art models predict significantly different behaviors at short distances and high momenta (scale-and-scheme dependence), where two-nucleon Short-Range Correlations (SRCs) dominate the nuclear wave function. Thus, SRCs are a unique tool to constrain the NN interaction and vice versa. SRCs are naturallyoccurring high-local-density NN pairs that, as a result of their short-distance (approx. 0.1 fm) repulsive interaction, fly apart with high momenta, hence populating momentum states above the Fermi level. The study of SRCs also has significant implications for other fields, such as the astrophysics of neutron stars and the behavior of cold atomic gasses. This thesis describes experimental and phenomenological studies of the short-distance / high-momentum structure of the NN interaction through the study of SRCs and vice versa. Experimentally, I report the first measurement of the 3He and 3H(e,e'p) reactions in Hall A of the Thomas Jefferson National Accelerator Facility in kinematics in which the measured cross sections should be sensitive to the underlying nucleon momentum distributions in the range 40 to 500 MeV/c. The resulting cross-section ratios and absolute cross sections were compared to momentum-distribution ratios and precise cross-section calculations respectively. Phenomenologically, I report the generalization of the Contact Formalism (GCF) to nuclear systems, which exploits scale separation and universality to describe nucleons at short distances and high momenta.
One of the biggest open questions in physics is the prevalence of matter over anti-matter in the present universe. One of possible answers lies in the violation of charge and parity symmetry in the lepton sector that would favor matter over anti-matter so that the universe becomes dominated by matter over time. Recent results from neutrino experiments like T2K and NOvA have indicated that there is CP violation in the leptonic sector \citep{Abe:2019vii}. However, the precise measurement of CP violation will require an unprecedented level of accuracy in these oscillation experiments. One of the challenges lies with the systematic uncertainties that come with the measurements, which include uncertainties related to the neutrino flux modeling, interaction modeling and detector related systematic uncertainties.\\ The first part of this thesis will go through the challenges related to flux uncertainties. It will discuss the flux uncertainties related to hadron production in the LBN F beamli ne for the DUNE experiment. Hadron production models used in flux simulations vary widely depending on the simulation and choice of physics models used to simulate the hadron production. This thesis will explain the method of using existing hadron production data to constrain these uncertainties, a method which has been used in MINERvA experiment.\\ The second part of the thesis goes through the effect of possible flux mismodeling and MINERvA's approach to address this effect. In doing so, we discovered that the suspected mismodeling could also result from incorrect estimation of the energy scale of the muons. This project not only demonstrated the challenges of flux modeling but also led to a novel approach of using neutrino energy spectra to understand the correlation between detector and neutrino beamline parameters. \\ A high statistics measurement of the anti-neutrino scattering cross section in the charged current quasielastic (CCQE) channel is the final part of the th esis. Th e 2-body interactions in this channel have the advantage of allowing reconstruction of the interaction kinematics from the outgoing muon trajectory which can be measured very well. Double differential cross sections as a function of muon kinematics, one of the deliverables of this analysis, will help future oscillation experiments understand their data. The cross-section as a function of the four-momentum transferred from the leptonic system to the hadronic system ($Q^{2}_{QE}$) can be used to test models used in simulating antineutrino interactions and the nuclear effects that can modify the predicted cross sections. Nuclear effects arise from the complex nuclear environment and both modify the initial scattering and change the fate of the particles produced from in neutrino-nucleus interactions. Study of nuclear effects will help to understand the structure of the atomic nucleus and its impact on neutrino interactions.
The highly and slightly condensed forms of chromatin, heterochromatin and euchromatin, respectively, segregate in the cell nucleus. Heterochromatin is more abundant in the nucleus periphery. Here, in this work, we study the mechanism of heterochromatin segregation by modeling interphase chromosomes as diblock ring copolymers confined in a rigid spherical shell using molecular dynamics simulations. In our model, heterochromatin and euchromatin are distinguished by their bending stiffnesses only, while an interaction potential between the spherical shell and chromatin is used to model lamin-associated proteins. Our simulations indicate that in the absence of attractive interactions between the nuclear shell and the chromatin, most heterochromatin segregates towards the nuclear interior due to the depletion of less flexible heterochromatin segments from the nuclear periphery. This inverted chromatin distribution, which is opposite to the conventional case with heterochromatin dominating at the periphery, is in accord with experimental observations in rod cells. This “inversion” is also found to be independent of the heterochromatin concentration and chromosome number. The chromatin distribution at the periphery found in vivo can be recovered by further increasing the bending stiffness of heterochromatin segments or by turning on attractive interactions between the nuclear shell and heterochromatin. Our results indicate that the bending stiffness of chromatin could be a contributor to chromosome organization along with differential effects of HP 1𝛼-driven phase segregation and of loop extruders and interactions with the nuclear envelope and topological constraints.
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The interaction of a supersonic wind generated by an active nucleus, a nuclear wind, with the hot interstellar medium of an elliptical host galaxy is investigated. We survey the basic time and spatial scales of this interaction through a study covering the range of probable wind and galaxy parameters. The evolving wind/ISM interaction is detailed, with the conclusion that a true equilibrium state is never possible due to long cooling times. Alteration of the wind by mass loading is considered, and a relationship between nuclear winds and central stellar clusters in this context is outlined. The nuclear wind will fundamentally alter the interstellar medium of the host galaxy. Powerful radio galaxies and quasars can evacuate the entire ISM of their host galaxy. In an isolated elliptical galaxy, winds from moderately powerful radio galaxies will either be confined to within about a kpc or evacuate the entire hot ISM. Even in the relatively high pressure ISM of elliptical galaxies winds containing only 1 percent-10 percent of the radiant luminosity of the active nucleus will extend to the narrow-line region. Therefore, nuclear winds are likely to control the properties of the narrow-line emission.
The carbohydrate response element binding protein (ChREBP) is a glucose-responsive transcription factor that plays a critical role in glucose-mediated induction of genes involved in hepatic glycolysis and lipogenesis. In response to fluctuating blood glucose levels ChREBP activity is regulated mainly by nucleocytoplasmic shuttling of ChREBP. Under high glucose ChREBP binds to importin α and importin β and translocates into the nucleus to initiate transcription. We have previously shown that the nuclear localization signal site (NLS) for ChREBP is bipartite with the NLS extending from Arg158 to Lys190. Here, we report the 2.5 Å crystal structure of the ChREBP-NLS peptide bound to importin α. The structure revealed that the NLS binding is monopartite, with the amino acid residues K171RRI174 from the ChREBP-NLS interacting with ARM2–ARM5 on importin α. We discovered that importin α also binds to the primary binding site of the 14-3-3 proteins with high affinity, which suggests that both importin α and 14-3-3 are each competing with the other for this broad-binding region (residues 117–196) on ChREBP. We screened a small compound library and identified two novel compounds that inhibit the ChREBP-NLS/importin α interaction, nuclear localization, and transcription activities of ChREBP. These candidate molecules support developing inhibitors of ChREBP that may be useful in treatment of obesity and the associated diseases.
Neutrino event generators require a delicate balance between theory and empirically-driven models to achieve reliable simulations. GENIE is the most commonly used generator, bridging theory and experiment in modern neutrino physics. Its flexible framework makes it ideal for comparing different models across all aspects of neutrino interactions—from the nuclear ground state and primary vertex to final-state interactions. Recently, GENIE has incorporated several state-of-the-art, theory-driven models, including spectral-function descriptions of the nuclear ground state, axial form factors from first-principles lattice QCD calculations, and the Liège intranuclear cascade model for simulating final-state interactions. Compared to the previous baseline models in GENIE—such as the local Fermi gas, dipole-like axial form factor, and hA final-state interaction model—the new implementations are more physically realistic and incorporate more complete physics, including nuclear de-excitation. This poster presents the implementation of new models in GENIE and their performance in comparisons among these models against recent MicroBooNE cross-section measurements.
Neutrino event generators require a delicate balance between theory and empirically-driven models to achieve reliable simulations. GENIE is the most commonly used generator, bridging theory and experiment in modern neutrino physics. Its flexible framework makes it ideal for comparing different models across all aspects of neutrino interactions—from the nuclear ground state and primary vertex to final-state interactions. Recently, GENIE has incorporated several state-of-the-art, theory-driven models, including spectral-function descriptions of the nuclear ground state, axial form factors from first-principles lattice QCD calculations, and the Liège intranuclear cascade model for simulating final-state interactions. Compared to the previous baseline models in GENIE—such as the local Fermi gas, dipole-like axial form factor, and hA final-state interaction model—the new implementations are more physically realistic and incorporate more complete physics, including nuclear de-excitation. This poster presents the implementation of new models in GENIE and their performance in comparisons among these models against recent MicroBooNE cross-section measurements.
Although quantum chromodynamics (QCD) has long been accepted as the underlying theory of the strong nuclear force, connecting the structure and interactions of nuclei to the fundamental parameters of QCD remains challenging. In this talk, I will present new results from lattice QCD and effective field theory that explore how nuclear interactions look in a world where the quarks are much heavier than they are in nature, and discuss lessons that can be learned for nuclear physics as well as searches for physics beyond the Standard Model.
We perform ab initio nuclear lattice calculations of the neutron-rich carbon and oxygen isotopes using high-fidelity chiral interactions. We find good agreement with the observed binding energies and compute correlations associated with each two-nucleon interaction channel. For the isospin T = 1 channels, we show that the dependence on T z provides a measure of the correlations among the extra neutrons in the neutron-rich nuclei. For the spin-singlet S-wave channel, we observe that any paired neutron interacts with the nuclear core as well as its neutron pair partner, while any unpaired neutron interacts primarily with only the nuclear core. For the other partial waves, the correlations among the extra neutrons grow more slowly and smoothly with the number of neutrons. These general patterns are observed in both the carbon and oxygen isotopes and may be universal features that appear in many neutron-rich nuclei.
A reexamination is conducted of the 'nuclear winter' hypothesis with a three-dimensional global model modified to allow for localized injection of smoke, its transport by the simulated winds, its absorption of sunlight, and its removal by model-simulated precipitation. Smoke injected into the troposphere is driven upward by solar heating. The tropopause, initially above the smoke, reforms below the heat smoke layer and separates it from precipitation below. Although much smoke is scavenged while the thermal structure is being altered, the residence time of the remaining smoke is greatly increased. Particularly for July conditions, a longer-lasting 'nuclear winter' effect is observed than was found in earlier modeling studies in which normal tropospheric residence times were assumed. In January the smaller solar flux in the northern hemisphere allows faster removal of smoke than in July. Significant cooling of the northern hemisphere continents is predicted; its dependence on season and injected smoke mass is described.
Nuclear many-body systems, ranging from nuclei to neutron stars, are some of the most interesting physical phenomena in our universe, and quantum Monte Carlo (QMC) approaches are among the most accurate many-body methods currently available to study them. In recent decades, interactions derived from chiral effective field theory (EFT) have been widely adopted in the study of nuclear many-body systems. One drawback of the QMC approach is the requirement that the nuclear interactions need to be local, whereas chiral EFT interactions usually contain nonlocalities. In this work, we leverage the capability of computing second-order perturbative corrections to the ground-state energy in order to develop a self-consistent approach to including nonlocal operators in QMC calculations. In conclusion, we investigate both the deuteron and the neutron-matter equation of state in order to show the robustness of our technique and pave the way for future QMC calculations at higher orders in the EFT, where nonlocal operators cannot be avoided.
Thirty years ago, Steven Weinberg published his seminal paper on “Nuclear Forces from chiral Lagrangians” which has revolutionized the field of theoretical nuclear physics. Nowadays, interactions derived from chiral effective field theory are routinely used to describe nuclear systems ranging from atomic nuclei to the dense matter explored in the core of neutron stars with theoretical uncertainty estimates. Here, in our contribution to the special issue “Celebrating 30 years of Steven Weinberg’s paper Nuclear Forces from Chiral Lagrangians”, we focus on the impact that chiral effective field theory interactions have played in advancing microscopic studies of atomic nuclei and the nuclear-matter equation of state using quantum Monte Carlo methods.
We present a set of new generalized kinematic imbalance variables that can be measured in neutrino scattering. These variables extend previous measurements of kinematic imbalance on the transverse plane and are more sensitive to modeling of nuclear effects. We demonstrate the enhanced power of these variables using simulation and then use the MicroBooNE detector to measure them for the first time. We report flux-integrated single- and double-differential measurements of charged-current muon neutrino scattering on argon using a topology with one muon and one proton in the final state as a function of these novel kinematic imbalance variables. These measurements allow us to demonstrate that the treatment of charged current quasielastic interactions in genie version 2 is inadequate to describe data. As a result, they reveal tensions with more modern generator predictions particularly in regions of phase space where final state interactions are important.